Rroxscaffold_4G00283040

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0001384
Physical Location & Seq
Forward (+)
5084314 .. 5090329
6016 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00283040.1

Sequence Viewer

Length: 2352 bp
ATGGCCTCCACAAACTCAAACCCATCCGACCCACCTCTCTCGCCGGACGACCTCGCCGCCCGAGCTCTGAACAAACGCTACGAGGGTCTCGTCACCGTTCGAACCAAGGCCATAAAGGGCAAAGGAGCTTGGTACTGGACTCATTTAGAGCCGGTCATGGTTCGCAACCCAAACACCAACGTCCCCAAAGCTGTCAAGCTCAAGTGTCTTCTCTGCGACGCCGTTTTCTCGGCCTCGAACCCCTCCAGAACCGCCTCCGAGCACCTCAAGCGCGGCACGTGTCCGAATTTCACCTCCGTGTTGAGGCCCAACTCGTCGGCGTCGCTGTCGCCGCAGCCCATATCGTCTCTGCCGTCGCCGTCTTCCCACAATCACAGAAAACGAAGCTCGCAAATGGGTACTCTCCTCTCTCCTCTCTCTCAAGCTCCTCCCACCTCTACTTCGATTCAAGTACATTCTTTGGCTATGATTGAGTCGTCTCCCGGCTTTTGCGGCGGAGAGCTTGGTTACTCGCAGGGTCCGAACCCGAACCCGAACCCGAATCCTGTCGGGTTGAGTCAGCAGCAGCAGCAGCAGCAGCACCATTTGGTGTTGTCGGGTGGGAAAGACGATTTGGGTGCTTTGGCAATGTTGGAGAATAGTGTCAAAAAGCTTAAAAGCCCCAAGCCTTCTTCTGCTAATGTTTCACTTACTAAGGAGCAGGTTGATTCTGCACTTGAGTTGTTGTCTGAGTGGTTCTATGAGTCTTGTGGGTCTGTCTCGTTTTCGAGCCTCGAGCATCCCAAGTTCAAGGCCTTTCTCGGCCAGGTGGGCTTGCCTGCTGTGTTGCAGCGCGAGCTTTCGGGTGCTCGGCTTGATGCTAAGTTTGCTGAGGCTAAAGCCGAGTCTGAGGCTAGGATAAGGGATGCAATGTTTTTTCAAGTGGCTTCAGATGGTTGGGAATGTAATAATTTTTGCGGTGGGGAGGAGAGTATGGTTAAGTTTATGGTTAATCTTCCGAATGGGAGCAGTGTTTTTCAGAAGGCTGTGTTTACTGGAGGGTCAGTTTCGTCGAAATATGCTGAGGAGGTAATGTGGGATGCGGTTAGTGGTGTGTGTGAGAATGCTGTGCAGCGTTGCGTGGGGATTGTTGCTGACAAGTATAAAGCCAAGGCATTGAGGAACTTGGAGAGTCAGAATCATTGGATGGTGAATGTTTCCTGTCAGCTACAGGGGTTTGTTTCTTTGATCAAGGATTTTAACAAAGAGCATAAGTTGTTTATGGTTGTTACTGATAATTGCGTGAAGGTTGCAAATTTTGTAAATACCACCACCGAGGTTAGGCGGATTTTTCAGAAGTACAAGATGCAGGAGCTTGGCTATGCTGGGCTGCTCCAAGTTTCTTCTTCCAAATGCGATAATTCAAAAAACTATGCGCCTGTTTATGCAATGCTGGAGGATATGTTGACCTGTTCCCGCATACTCCAAATGGTTGTCTTGGATGATTGCTATAAGGTGGCATGTGTGGAGGATCCAAGTGCTAGGGAAGTTGCAGCGCTGATTCAAAGTGAAGTATTCTGGAATGAACTAGAGGCAGTTTATTCACTTATGAAGCTGATAAGAGGGATGGCTCAGGAGATTGAAGCTGAGAGGCCATTAATTGGGCAATGCCTGCCTCTTTGGGAAGAGTTGCGAACAAAAGTAAAGGAATGGTGTGCCAAGTTTAACATTGATGAAGGACCTGTTGAGAAAATAGTTGAAAAACGCTTCGCAAAGAATTACCACCCAGCATGGTCGGCTGCATTCATACTTGATCCACAATACCTGATGAAGGATGCTAGTGGAAAGTACCTTCCACCATTCAAGTGCTTGACGCATGAGCAGGAGAAGGATGTAGATAAGCTCATTACCAGATTGGTATCCAGGGAAGAAGCGCATGTTGCATTAATGGAACTCATGAAATGGAGGACAGAAGGAATGGACCCACTTTATGCTCAGGCAGTTCAAGTTAAACAGCAAGATCCTGTTACTGGAAAAATGAAAATTGCAAACCCGCAGAGCAGTAGACTTGTGTGGGAAACTTGTCTAAGCAAGTTAAACATACTGGGGAAGGTGGCAGTGAGACTTATCTTCCTCCATGCAACCTCATTTGGATTCAAGTGTAATTGGTCTTTCATGAAATGGATTTGTGTACATAGGCACTCAAGGATAGGCCTGGAAAGGGCAGAGAAGATGATATTCATTGCAGCTCATGCAAAGCTTGAAAGAAGGGATCTCTCTAACGACGAAGAAAGGGAAGCAGAGCTGTTTGCGACTGCGAGTGTTGATGAGGACATGCTGAATGAGGTCCTTTCCGATGCACCCACAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

783

Amino Acids

87.2

Weight (kDa)

7.94

Isoelectric Point (pI)

45.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7963 PF25908 16 - 98 2.5e-45 Domain of unknown function (DUF7963)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 691
AccB7I CCANNNNNTGG 1 cut(s) 1640
AccI GTMKAC 1 cut(s) 2044
AccII CGCG 2 cut(s) 273, 834
AclWI GGATC 5 cut(s) 1505, 1518, 1787, 1994, 2259
AcoI YGGCCR 1 cut(s) 802
AcsI RAATTY 2 cut(s) 286, 1294
AcuI CTGAAG 1 cut(s) 912
AcvI CACGTG 1 cut(s) 279
AcyI GRCGYC 2 cut(s) 219, 320
AfaI GTAC 6 cut(s) 134, 400, 453, 1340, 1829, 2172
AfeI AGCGCT 1 cut(s) 1536
AfiI CCNNNNNNNGG 6 cut(s) 303, 1320, 1640, 1810, 2009, 2200
AflIII ACRYGT 1 cut(s) 278
AjnI CCWGG 3 cut(s) 804, 1901, 2193
AjuI GAANNNNNNNTTGG 2 cut(s) 596, 628
AleI CACNNNNGTG 1 cut(s) 296
Alw21I GWGCWC 3 cut(s) 67, 264, 850
Alw26I GTCTC 5 cut(s) 92, 351, 483, 763, 2095
AlwI GGATC 5 cut(s) 1505, 1518, 1787, 1994, 2259
Ama87I CYCGRG 2 cut(s) 60, 773
Aor51HI AGCGCT 1 cut(s) 1536
AoxI GGCC 8 cut(s) 3, 108, 231, 305, 792, 802, 1631, 2191
ApoI RAATTY 2 cut(s) 286, 1294
AseI ATTAAT 2 cut(s) 1637, 1925
AspLEI GCGC 5 cut(s) 273, 834, 1417, 1537, 1915
AspS9I GGNCC 5 cut(s) 306, 518, 1718, 1960, 2326
AsuC2I CCSGG 1 cut(s) 483
AsuHPI GGTGA 3 cut(s) 85, 283, 1201
AsuII TTCGAA 1 cut(s) 100
AvaI CYCGRG 2 cut(s) 60, 773
AvaII GGWCC 4 cut(s) 518, 1718, 1960, 2326
BamHI GGATCC 1 cut(s) 1510
BanII GRGCYC 1 cut(s) 67
BbrPI CACGTG 1 cut(s) 279
BbsI GAAGAC 2 cut(s) 200, 354
Bbv12I GWGCWC 3 cut(s) 67, 264, 850
BbvCI CCTCAGC 2 cut(s) 870, 1062
BccI CCATC 4 cut(s) 31, 926, 1180, 1600
BceAI ACGGC 3 cut(s) 206, 337, 343
BcgI CGANNNNNNTGC 2 cut(s) 599, 633
BciT130I CCWGG 3 cut(s) 806, 1903, 2195
BciVI GTATCC 1 cut(s) 1909
BclI TGATCA 1 cut(s) 1227
BcnI CCSGG 1 cut(s) 483
BcoDI GTCTC 5 cut(s) 92, 351, 483, 763, 2095
BfaI CTAG 4 cut(s) 894, 1521, 1568, 1818
BfmI CTRYAG 1 cut(s) 1208
BfoI RGCGCY 1 cut(s) 1538
BfuAI ACCTGC 1 cut(s) 691
BfuI GTATCC 1 cut(s) 1909
BglI GCCNNNNNGGC 1 cut(s) 810
Bme1390I CCNGG 4 cut(s) 483, 806, 1903, 2195
Bme18I GGWCC 4 cut(s) 518, 1718, 1960, 2326
BmeT110I CYCGRG 2 cut(s) 60, 773
BmgT120I GGNCC 5 cut(s) 306, 518, 1718, 1960, 2326
BmiI GGNNCC 3 cut(s) 519, 1512, 1962
BmrFI CCNGG 4 cut(s) 483, 806, 1903, 2195
BmrI ACTGGG 1 cut(s) 2093
BmsI GCATC 7 cut(s) 787, 847, 895, 1069, 1335, 1804, 2326
BmuI ACTGGG 1 cut(s) 2093
BpiI GAAGAC 2 cut(s) 200, 354
BpmI CTGGAG 3 cut(s) 229, 1056, 1454
Bpu10I CCTNAGC 4 cut(s) 870, 1062, 1611, 1974
Bpu14I TTCGAA 1 cut(s) 100
BpuEI CTTGAG 5 cut(s) 185, 251, 405, 737, 2167
BpuMI CCSGG 1 cut(s) 483
BsaAI YACGTR 1 cut(s) 279
BsaBI GATNNNNATC 1 cut(s) 1897
BsaHI GRCGYC 2 cut(s) 219, 320
BsaI GGTCTC 1 cut(s) 92
BsaJI CCNNGG 4 cut(s) 105, 1149, 1314, 1902
BsaXI ACNNNNNCTCC 6 cut(s) 1029, 1058, 1059, 1088, 1427, 1457
Bsc4I CCNNNNNNNGG 6 cut(s) 303, 1320, 1640, 1810, 2009, 2200
Bse118I RCCGGY 1 cut(s) 151
Bse1I ACTGG 4 cut(s) 140, 1039, 2014, 2088
Bse3DI GCAATG 5 cut(s) 633, 915, 1434, 1652, 2220
Bse8I GATNNNNATC 1 cut(s) 1897
BseBI CCWGG 3 cut(s) 806, 1903, 2195
BseDI CCNNGG 4 cut(s) 105, 1149, 1314, 1902
BseGI GGATG 9 cut(s) 23, 778, 910, 1084, 1191, 1486, 1611, 1819, 1876
BseJI GATNNNNATC 1 cut(s) 1897
BseLI CCNNNNNNNGG 6 cut(s) 303, 1320, 1640, 1810, 2009, 2200
BseMI GCAATG 5 cut(s) 633, 915, 1434, 1652, 2220
BseMII CTCAG 7 cut(s) 720, 861, 879, 1053, 1617, 1625, 1988
BseNI ACTGG 4 cut(s) 140, 1039, 2014, 2088
BseRI GAGGAG 5 cut(s) 395, 402, 417, 980, 1079
BseYI CCCAGC 2 cut(s) 1364, 1765
BsgI GTGCAG 2 cut(s) 696, 1130
Bsh1236I CGCG 2 cut(s) 273, 834
BshFI GGCC 8 cut(s) 5, 110, 233, 307, 794, 804, 1633, 2193
BsiHKAI GWGCWC 3 cut(s) 67, 264, 850
BsiHKCI CYCGRG 2 cut(s) 60, 773
BsiSI CCGG 3 cut(s) 44, 152, 483
BslFI GGGAC 1 cut(s) 167
BslI CCNNNNNNNGG 6 cut(s) 303, 1320, 1640, 1810, 2009, 2200
BsmAI GTCTC 5 cut(s) 92, 351, 483, 763, 2095
BsmBI CGTCTC 2 cut(s) 351, 483
BsmFI GGGAC 1 cut(s) 167
BsmI GAATGC 2 cut(s) 1108, 1781
BsnI GGCC 8 cut(s) 5, 110, 233, 307, 794, 804, 1633, 2193
Bso31I GGTCTC 1 cut(s) 92
BsoBI CYCGRG 2 cut(s) 60, 773
Bsp119I TTCGAA 1 cut(s) 100
Bsp1286I GDGCHC 3 cut(s) 67, 264, 850
Bsp1407I TGTACA 1 cut(s) 2170
Bsp143I GATC 5 cut(s) 1227, 1510, 1792, 1999, 2251
BspANI GGCC 8 cut(s) 5, 110, 233, 307, 794, 804, 1633, 2193
BspCNI CTCAG 7 cut(s) 721, 862, 880, 1054, 1618, 1624, 1987
BspFNI CGCG 2 cut(s) 273, 834
BspHI TCATGA 2 cut(s) 1935, 2154
BspLI GGNNCC 3 cut(s) 519, 1512, 1962
BspMI ACCTGC 1 cut(s) 691
BspPI GGATC 5 cut(s) 1505, 1518, 1787, 1994, 2259
BspT104I TTCGAA 1 cut(s) 100
BspTNI GGTCTC 1 cut(s) 92
BsrDI GCAATG 5 cut(s) 633, 915, 1434, 1652, 2220
BsrFI RCCGGY 1 cut(s) 151
BsrGI TGTACA 1 cut(s) 2170
BsrI ACTGG 4 cut(s) 140, 1039, 2014, 2088
BssAI RCCGGY 1 cut(s) 151
BssECI CCNNGG 4 cut(s) 105, 1149, 1314, 1902
BssMI GATC 5 cut(s) 1227, 1510, 1792, 1999, 2251
BssNI GRCGYC 2 cut(s) 219, 320
BssT1I CCWWGG 2 cut(s) 105, 1149
Bst2UI CCWGG 3 cut(s) 806, 1903, 2195
Bst4CI ACNGT 2 cut(s) 97, 2347
Bst6I CTCTTC 1 cut(s) 1659
BstACI GRCGYC 2 cut(s) 219, 320
BstAPI GCANNNNNTGC 2 cut(s) 1651, 2231
BstAUI TGTACA 1 cut(s) 2170
BstBAI YACGTR 1 cut(s) 279
BstBI TTCGAA 1 cut(s) 100
BstC8I GCNNGC 5 cut(s) 389, 815, 819, 836, 1652
BstENI CCTNNNNNAGG 1 cut(s) 1808
BstF5I GGATG 9 cut(s) 23, 778, 910, 1084, 1191, 1486, 1611, 1819, 1876
BstFNI CGCG 2 cut(s) 273, 834
BstH2I RGCGCY 1 cut(s) 1538
BstHHI GCGC 5 cut(s) 273, 834, 1417, 1537, 1915
BstKTI GATC 5 cut(s) 1230, 1513, 1795, 2002, 2254
BstMAI GTCTC 5 cut(s) 92, 351, 483, 763, 2095
BstMBI GATC 5 cut(s) 1227, 1510, 1792, 1999, 2251
BstNI CCWGG 3 cut(s) 806, 1903, 2195
BstNSI RCATGY 3 cut(s) 1503, 1919, 2317
BstSCI CCNGG 4 cut(s) 481, 804, 1901, 2193
BstSFI CTRYAG 1 cut(s) 1208
BstUI CGCG 2 cut(s) 273, 834
BstV2I GAAGAC 2 cut(s) 200, 354
BstX2I RGATCY 3 cut(s) 1510, 1999, 2251
BstYI RGATCY 3 cut(s) 1510, 1999, 2251
BsuI GTATCC 1 cut(s) 1909
BsuRI GGCC 8 cut(s) 5, 110, 233, 307, 794, 804, 1633, 2193
BtsCI GGATG 9 cut(s) 23, 778, 910, 1084, 1191, 1486, 1611, 1819, 1876
BtsI GCAGTG 2 cut(s) 1015, 2103
BtsIMutI CAGTG 3 cut(s) 1015, 2103, 2352
BveI ACCTGC 1 cut(s) 691
Cac8I GCNNGC 5 cut(s) 389, 815, 819, 836, 1652
CciI TCATGA 2 cut(s) 1935, 2154
CfoI GCGC 5 cut(s) 273, 834, 1417, 1537, 1915
Cfr10I RCCGGY 1 cut(s) 151
Cfr13I GGNCC 5 cut(s) 306, 518, 1718, 1960, 2326
CseI GACGC 3 cut(s) 227, 309, 1861
Csp6I GTAC 6 cut(s) 133, 399, 452, 1339, 1828, 2171
CviQI GTAC 6 cut(s) 133, 399, 452, 1339, 1828, 2171
DpnI GATC 5 cut(s) 1229, 1512, 1794, 2001, 2253
DpnII GATC 5 cut(s) 1227, 1510, 1792, 1999, 2251
EaeI YGGCCR 1 cut(s) 802
Eam1104I CTCTTC 1 cut(s) 1659
EarI CTCTTC 1 cut(s) 1659
EciI GGCGGA 2 cut(s) 510, 1339
Ecl136II GAGCTC 1 cut(s) 65
Eco130I CCWWGG 2 cut(s) 105, 1149
Eco147I AGGCCT 2 cut(s) 794, 2193
Eco24I GRGCYC 1 cut(s) 67
Eco31I GGTCTC 1 cut(s) 92
Eco47I GGWCC 4 cut(s) 518, 1718, 1960, 2326
Eco47III AGCGCT 1 cut(s) 1536
Eco53kI GAGCTC 1 cut(s) 65
Eco57I CTGAAG 1 cut(s) 912
Eco72I CACGTG 1 cut(s) 279
Eco88I CYCGRG 2 cut(s) 60, 773
EcoICRI GAGCTC 1 cut(s) 65
EcoNI CCTNNNNNAGG 1 cut(s) 1808
EcoO109I RGGNCCY 2 cut(s) 1718, 2326
EcoRII CCWGG 3 cut(s) 804, 1901, 2193
EcoT14I CCWWGG 2 cut(s) 105, 1149
EcoT38I GRGCYC 1 cut(s) 67
ErhI CCWWGG 2 cut(s) 105, 1149
Esp3I CGTCTC 2 cut(s) 351, 483
FaqI GGGAC 1 cut(s) 167
FauI CCCGC 2 cut(s) 1463, 2040
FbaI TGATCA 1 cut(s) 1227
FblI GTMKAC 1 cut(s) 2044
FokI GGATG 9 cut(s) 10, 765, 917, 1091, 1198, 1493, 1618, 1826, 1883
FriOI GRGCYC 1 cut(s) 67
FspBI CTAG 4 cut(s) 894, 1521, 1568, 1818
GlaI GCGC 5 cut(s) 272, 833, 1416, 1536, 1914
GsaI CCCAGC 2 cut(s) 1368, 1769
GsuI CTGGAG 3 cut(s) 229, 1056, 1454
HaeII RGCGCY 1 cut(s) 1538
HaeIII GGCC 8 cut(s) 5, 110, 233, 307, 794, 804, 1633, 2193
HapII CCGG 3 cut(s) 44, 152, 483
HgaI GACGC 3 cut(s) 227, 309, 1861
HhaI GCGC 5 cut(s) 273, 834, 1417, 1537, 1915
Hin1I GRCGYC 2 cut(s) 219, 320
Hin6I GCGC 5 cut(s) 271, 832, 1415, 1535, 1913
HinP1I GCGC 5 cut(s) 271, 832, 1415, 1535, 1913
HincII GTYRAC 1 cut(s) 1446
HindII GTYRAC 1 cut(s) 1446
HindIII AAGCTT 2 cut(s) 650, 2237
HpaII CCGG 3 cut(s) 44, 152, 483
HphI GGTGA 3 cut(s) 85, 283, 1201
Hpy166II GTNNAC 4 cut(s) 1032, 1446, 2045, 2171
Hpy188III TCNNGA 5 cut(s) 246, 1558, 1613, 1936, 2155
Hpy8I GTNNAC 4 cut(s) 1032, 1446, 2045, 2171
Hpy99I CGWCG 6 cut(s) 221, 319, 325, 358, 1054, 2267
HpyCH4III ACNGT 2 cut(s) 97, 2347
HpyCH4IV ACGT 2 cut(s) 180, 278
HpySE526I ACGT 2 cut(s) 180, 278
Hsp92I GRCGYC 2 cut(s) 219, 320
HspAI GCGC 5 cut(s) 271, 832, 1415, 1535, 1913
Ksp22I TGATCA 1 cut(s) 1227
Kzo9I GATC 5 cut(s) 1227, 1510, 1792, 1999, 2251
LmnI GCTCC 6 cut(s) 125, 430, 697, 1005, 1351, 1377
LweI GCATC 7 cut(s) 787, 847, 895, 1069, 1335, 1804, 2326
MaeI CTAG 4 cut(s) 894, 1521, 1568, 1818
MaeII ACGT 2 cut(s) 180, 278
MaeIII GTNAC 4 cut(s) 91, 506, 1267, 2005
MalI GATC 5 cut(s) 1229, 1512, 1794, 2001, 2253
MboI GATC 5 cut(s) 1227, 1510, 1792, 1999, 2251
MflI RGATCY 3 cut(s) 1510, 1999, 2251
MhlI GDGCHC 3 cut(s) 67, 264, 850
MluCI AATT 9 cut(s) 286, 949, 1276, 1294, 1399, 1638, 1756, 2022, 2143
MlyI GAGTC 6 cut(s) 133, 482, 565, 752, 893, 1180
MmeI TCCRAC 2 cut(s) 51, 612
MseI TTAA 9 cut(s) 654, 978, 990, 1239, 1637, 1704, 1925, 1989, 2075
MslI CAYNNNNRTG 2 cut(s) 296, 1843
MspI CCGG 3 cut(s) 44, 152, 483
MspR9I CCNGG 4 cut(s) 483, 806, 1903, 2195
Mva1269I GAATGC 2 cut(s) 1108, 1781
MvaI CCWGG 3 cut(s) 806, 1903, 2195
MvnI CGCG 2 cut(s) 273, 834
NciI CCSGG 1 cut(s) 483
NdeII GATC 5 cut(s) 1227, 1510, 1792, 1999, 2251
NlaIV GGNNCC 3 cut(s) 519, 1512, 1962
NmeAIII GCCGAG 4 cut(s) 209, 780, 829, 907
NmuCI GTSAC 1 cut(s) 91
NspI RCATGY 3 cut(s) 1503, 1919, 2317
NspV TTCGAA 1 cut(s) 100
OliI CACNNNNGTG 1 cut(s) 296
PaeR7I CTCGAG 1 cut(s) 773
PagI TCATGA 2 cut(s) 1935, 2154
PceI AGGCCT 2 cut(s) 794, 2193
PcsI WCGNNNNNNNCGW 3 cut(s) 87, 350, 518
PctI GAATGC 2 cut(s) 1108, 1781
PfeI GAWTC 6 cut(s) 445, 541, 707, 1177, 1540, 2133
PflMI CCANNNNNTGG 1 cut(s) 1640
PleI GAGTC 6 cut(s) 133, 481, 564, 751, 892, 1179
PmaCI CACGTG 1 cut(s) 279
PmlI CACGTG 1 cut(s) 279
PpsI GAGTC 6 cut(s) 133, 481, 564, 751, 892, 1179
Ppu21I YACGTR 1 cut(s) 279
PpuMI RGGWCCY 2 cut(s) 1718, 2326
PshBI ATTAAT 2 cut(s) 1637, 1925
Psp124BI GAGCTC 1 cut(s) 67
Psp5II RGGWCCY 2 cut(s) 1718, 2326
Psp6I CCWGG 3 cut(s) 804, 1901, 2193
PspCI CACGTG 1 cut(s) 279
PspFI CCCAGC 2 cut(s) 1364, 1765
PspGI CCWGG 3 cut(s) 804, 1901, 2193
PspN4I GGNNCC 3 cut(s) 519, 1512, 1962
PspPI GGNCC 5 cut(s) 306, 518, 1718, 1960, 2326
PspPPI RGGWCCY 2 cut(s) 1718, 2326
PspXI VCTCGAGB 1 cut(s) 773
PsrI GAACNNNNNNTAC 2 cut(s) 62, 94
PsuI RGATCY 3 cut(s) 1510, 1999, 2251
RsaI GTAC 6 cut(s) 134, 400, 453, 1340, 1829, 2172
RsaNI GTAC 6 cut(s) 133, 399, 452, 1339, 1828, 2171
RseI CAYNNNNRTG 2 cut(s) 296, 1843
SacI GAGCTC 1 cut(s) 67
SaqAI TTAA 9 cut(s) 654, 978, 990, 1239, 1637, 1704, 1925, 1989, 2075
Sau3AI GATC 5 cut(s) 1227, 1510, 1792, 1999, 2251
Sau96I GGNCC 5 cut(s) 306, 518, 1718, 1960, 2326
SchI GAGTC 6 cut(s) 133, 482, 565, 752, 893, 1180
ScrFI CCNGG 4 cut(s) 483, 806, 1903, 2195
SduI GDGCHC 3 cut(s) 67, 264, 850
SfaNI GCATC 7 cut(s) 787, 847, 895, 1069, 1335, 1804, 2326
SfcI CTRYAG 1 cut(s) 1208
Sfr274I CTCGAG 1 cut(s) 773
SfuI TTCGAA 1 cut(s) 100
SinI GGWCC 4 cut(s) 518, 1718, 1960, 2326
SlaI CTCGAG 1 cut(s) 773
SmiMI CAYNNNNRTG 2 cut(s) 296, 1843
SmlI CTYRAG 6 cut(s) 200, 266, 420, 716, 773, 2182
SmoI CTYRAG 6 cut(s) 200, 266, 420, 716, 773, 2182
Sse9I AATT 9 cut(s) 286, 949, 1276, 1294, 1399, 1638, 1756, 2022, 2143
SseBI AGGCCT 2 cut(s) 794, 2193
SspMI CTAG 4 cut(s) 894, 1521, 1568, 1818
SstI GAGCTC 1 cut(s) 67
StuI AGGCCT 2 cut(s) 794, 2193
StyD4I CCNGG 4 cut(s) 481, 804, 1901, 2193
StyI CCWWGG 2 cut(s) 105, 1149
TaaI ACNGT 2 cut(s) 97, 2347
TaiI ACGT 2 cut(s) 183, 281
TaqI TCGA 6 cut(s) 100, 236, 443, 767, 774, 1052
TasI AATT 9 cut(s) 286, 949, 1276, 1294, 1399, 1638, 1756, 2022, 2143
TatI WGTACW 3 cut(s) 451, 1338, 2170
TauI GCSGC 4 cut(s) 59, 276, 334, 495
TfiI GAWTC 6 cut(s) 445, 541, 707, 1177, 1540, 2133
Tru1I TTAA 9 cut(s) 654, 978, 990, 1239, 1637, 1704, 1925, 1989, 2075
Tru9I TTAA 9 cut(s) 654, 978, 990, 1239, 1637, 1704, 1925, 1989, 2075
TscAI CASTG 3 cut(s) 1015, 2103, 2352
TseFI GTSAC 1 cut(s) 91
Tsp45I GTSAC 1 cut(s) 91
TspGWI ACGGA 1 cut(s) 286
TspRI CASTG 3 cut(s) 1015, 2103, 2352
Van91I CCANNNNNTGG 1 cut(s) 1640
VpaK11BI GGWCC 4 cut(s) 518, 1718, 1960, 2326
VspI ATTAAT 2 cut(s) 1637, 1925
XagI CCTNNNNNAGG 1 cut(s) 1808
XapI RAATTY 2 cut(s) 286, 1294
XceI RCATGY 3 cut(s) 1503, 1919, 2317
XhoI CTCGAG 1 cut(s) 773
XmiI GTMKAC 1 cut(s) 2044
XspI CTAG 4 cut(s) 894, 1521, 1568, 1818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.