Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Forward (+)

1324226 .. 1329867

Gene Structure 5642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g02110.t8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3024 bp

ATGAACAACCTCAAGCTAGGGGTGGATGTGGTTAGCGCCCACAATCTTTTGCCTAAAGATGGGCAAGGTTCATCTGATGCATTTGTGGAGCTGTATTTTGATGGCCAGAGGTTCCGCAGCACTATAAAAGAAAAGGATCTCAACCCCGTTTGGAATGAAAGTTTCTACTTCAACATTGCTGATCCTTCAAACCTACACTATCTTACTCTTGAGGCCTATGTCTACAACAATGTGAAAGCTACTCACTCCAGGTCCTTTCTTGGAAAGATCAGTGTCACTGGGAATTCATTTGTCCCCTATTCTGATGCTGTTGTCTTGCATTACCCTCTGGAAAAGCGTGGCATCTTCTCACGTGTAAGAGGAGAGCTCGGCTTGAAGGTTTATGTTACTGATGACCCAACAATTAAGTCCTCCACTCCAATGCCGGCTTCTGAATCCCTTACTGATCAGGATCCAGGCCTTGCACAGACCCAAGGAGTTTCAGCTCCTGGCATGAGCTCATTTCGGAGTGAGAAATCTCAGGCAAGACACACCTTTCATCATCTGCCAAATCCAGGTCAAGAGAGCCAACATCAGCATCATGCTTCTGCTGCCCCAGATACTCATTATGTACCTAAGCATGAAGCTGATCAAATGAAATCTGAACAGCAGCCTGCAAAGCTAGTCCGCATGTACTCTGCTTCAGCATCACAACCTGTTGACTATGCACTTAAAGAGACAAGCCCTTACCTTGGAGGTGGGAGGGTTGTTGGTGGACGTGTTATTCATGGAGACAAGACTGCAAGCACCTATGATCTAGTCGAGAGGATGTACTTTCTCTATGTAAGGGTTGTTAAAGCGCGCGAGCTTCCTGCCATGGATGTTACAGGAAGTCTTGATCCTTTTGTTGAAGCGAGAATTGGAAACTACAGAGGGATTACAAAACACTATGAGAAACAGCAAAATCCAGTATGGAATCAGGTTTTTGCTTTTTCAAAAGATCGCATGCAAGCATCTGTGTTAGAAGTTGTGGTTAAAGACAAGGACCTGCTTAAAGATGACTTTGTGGGAATTGTGAGGTTTGACATCAATGAGGTTCCATTAAGAGTTCCACCTGACAGTCCTCTAGCTCCAGAGTGGTACCGACTTGCGGACAAAAAAGGTGAAAAGATTAAAGGGGAGTTGATGCTTGCAGTCTGGATTGGCACTCAAGCTGATGAGGCTTTTTCTGATGCATGGCACTCTGATGCTGCTACACCTGTTGATAGCTCACCAGCTGCATCTGCAGTGATTCGCTCAAAGGTGTATCATGCACCAAGGCTGTGGTATGTTCGTGTGAATGTGATAGAGGCACAAGACCTCTTTGCAACAGAGAAGAATCGTTTCCCAGATGCATATGTCAAGGTACAGATTGGAAACCAGGTTATGAAGACAAAAACACTTCAGGCTCGAAATTTAAACCCACTTTGGAATGAAGACCTTTTGTTTGTGGCTTCTGAGCCCTTTGAAGACCATCTGGTCATTTCAGTTGAGGACCGTGTTGGCCCTGGCAAGGATGAAATCCTTGGGAGGGTTATATTACCACTCAACTCTGTAGATAGGCGAGCTGATGATCGTATGATCCATTCCAGATGGTTCAATCTTGAAAAGCCAGTTGCTGTGGATGTGGATCAGTTGAAGAAAGAGAAGTTCTCAAGCCGCATTCATCTTCGTGTTTGTCTTGATGGAGGATACCATGTTCTAGATGAGTCGACTCATTATAGTAGTGACTTACGCCCCACAGCAAAACAGCTTTGGAGGCCAGCCATTGGAGTTTTAGAGCTTGGAATCTTGAATGCTGTGGGGCTGCATCCGATGAAAACAAGAGATGGAAGGGGCACTTCAGATACTTACTGTGTAGCAAAATATGGCCATAAATGGGTCAGGACAAGAACCCTTGTCGATAATCTGTGTCCGAAATATAATGAGCAGTACACTTGGGAGGTGTTTGATCCTTCTACAGTTCTTACAGTAGGTGTGTTTGACAACAGCCAGCTTGGGGATAAGGATTCCAATGGCCACAAAGACTTGAAAATTGGAAAGGTTCGTATTCGTATCTCAACACTTGAAGCAGGCCGCATATACACACACTCGTATCCGCTGCTAGTTCTTCACCCAGCTGGTGTCAAGAAGATGGGAGAGTTGCATTTGGCTATTCGGTTTTCATGCACATCTTTTGTGAACATGCTTTACACATACTCAAAACCACTGCTACCAAAGATGCACTACGTAAGGCCCTTCAATGTAATGCAGCTTGACATGCTACGTCACCAGGCTGTGAACATAGTTGCAGCAAGGCTAGGGCGAGCTGAGCCACCACTTAGGAAGGAGGTGGTGGAATACATGTCTGATGTGGACTCACATCTTTGGAGCATGAGACGGAGCAAAGCGAATTTTTTCAGGCTTATGACAGTTTTCTCAGGAGTATTTGCTATAGGCAAATGGTTTACTGACATTTGCATGTGGAAGAATCCCATAACCACTGTGCTTGTCCATGTCCTCTTCCTTATGCTTGTTTTCTTTCCGGAACTGATTCTACCCACAGCTTTTCTGTACATGTTTCTGATTGGGGTATGGAACTTCAGATACCGGCCTAGATATCCTCCTCACATGAACACAAAGATCTCACAAGCTGATCTAGTACACCCTGATGAGCTAGATGAGGAGTTCGACACATTTCCCACTAGCAGGAATCCTGAGCTGGTGAGAATGAGGTATGATCGTCTGAGAAGTGTGGCTGGTAGAATTCAGACAGTGGTTGGTGATGTAGCAACACAAGGTGAGCGGCTTCAGGCACTTTTGAGTTGGCGTGACCCGCGGGCTACAGCACTCTTTGTCACATTTTGCCTCATAGCTGCCTTGGTGATGTATGTGACACCATTCCAGGTGGTGGCAGCATTGGCAGGGTTCTTTATGATGAGGCATCCGCGGTTTCGACACAGGATGCCCTCAGCACCCATCAACTTCTTCCGCAGGTTGCCTGCTAGAACTGATAGTATGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1008

Amino Acids

114.63

Weight (kDa)

9.07

Isoelectric Point (pI)

41.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	5 - 96	2.5e-18	C2 domain
C2	PF00168	273 - 375	1.5e-19	C2 domain
C2	PF00168	436 - 541	1.7e-21	C2 domain
C2	PF00168	597 - 707	7.4e-19	C2 domain
PRT_C	PF08372	852 - 1007	4e-81	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1496
Acc36I	ACCTGC	2 cut(s)	1035, 2982
Acc65I	GGTACC	1 cut(s)	1119
AccB1I	GGYRCC	1 cut(s)	1119
AccB7I	CCANNNNNTGG	2 cut(s)	1787, 2908
AccBSI	CCGCTC	1 cut(s)	2803
AccI	GTMKAC	2 cut(s)	222, 1730
AccII	CGCG	4 cut(s)	841, 843, 2836, 2947
AccIII	TCCGGA	1 cut(s)	2542
AclWI	GGATC	8 cut(s)	144, 176, 446, 459, 872, 1594, 1656, 1964
AcoI	YGGCCR	3 cut(s)	103, 1888, 2035
AcsI	RAATTY	4 cut(s)	283, 1432, 2410, 2763
AcuI	CTGAAG	5 cut(s)	666, 1406, 1845, 2584, 2792
AcvI	CACGTG	1 cut(s)	353
AdeI	CACNNNGTG	1 cut(s)	2798
AfaI	GTAC	8 cut(s)	612, 674, 812, 1121, 1386, 1952, 2573, 2661
AflIII	ACRYGT	4 cut(s)	352, 757, 2361, 2574
AjiI	CACGTC	1 cut(s)	758
AjnI	CCWGG	8 cut(s)	248, 454, 487, 553, 1398, 1525, 2289, 2901
AjuI	GAANNNNNNNTTGG	4 cut(s)	412, 444, 882, 914
AloI	GAACNNNNNNTCC	2 cut(s)	1701, 1733
Alw21I	GWGCWC	2 cut(s)	369, 500
Alw26I	GTCTC	3 cut(s)	710, 765, 2389
AlwI	GGATC	8 cut(s)	144, 176, 446, 459, 872, 1594, 1656, 1964
AlwNI	CAGNNNCTG	2 cut(s)	488, 1637
Aor13HI	TCCGGA	1 cut(s)	2542
ApoI	RAATTY	4 cut(s)	283, 1432, 2410, 2763
ArsI	GACNNNNNNTTYG	2 cut(s)	1448, 1480
Asp700I	GAANNNNTTC	3 cut(s)	1361, 2414, 2550
Asp718I	GGTACC	1 cut(s)	1119
AspLEI	GCGC	3 cut(s)	38, 841, 843
AspS9I	GGNCC	5 cut(s)	252, 1024, 1513, 1523, 2253
AsuHPI	GGTGA	8 cut(s)	1154, 1242, 2123, 2279, 2734, 2792, 2810, 2893
AvaII	GGWCC	3 cut(s)	252, 1024, 1513
BaeGI	GKGCMC	1 cut(s)	1859
BaeI	ACNNNNGTAYC	2 cut(s)	2096, 2129
BalI	TGGCCA	3 cut(s)	105, 1890, 2037
BamHI	GGATCC	1 cut(s)	451
BanI	GGYRCC	1 cut(s)	1119
BanII	GRGCYC	3 cut(s)	369, 500, 1482
BbrPI	CACGTG	1 cut(s)	353
BbsI	GAAGAC	3 cut(s)	1415, 1461, 1494
Bbv12I	GWGCWC	2 cut(s)	369, 500
BbvCI	CCTCAGC	1 cut(s)	2968
BccI	CCATC	8 cut(s)	53, 95, 1500, 1605, 1697, 1841, 2146, 2984
BcgI	CGANNNNNNTGC	2 cut(s)	833, 867
BciT130I	CCWGG	8 cut(s)	250, 456, 489, 555, 1400, 1527, 2291, 2903
BciVI	GTATCC	2 cut(s)	1703, 2124
BclI	TGATCA	2 cut(s)	445, 628
BcoDI	GTCTC	3 cut(s)	710, 765, 2389
BfmI	CTRYAG	6 cut(s)	907, 1263, 1572, 1977, 2451, 2841
BfoI	RGCGCY	1 cut(s)	39
BfuAI	ACCTGC	2 cut(s)	1035, 2982
BfuI	GTATCC	2 cut(s)	1703, 2124
BglII	AGATCT	1 cut(s)	2640
BlpI	GCTNAGC	1 cut(s)	2328
Bme1390I	CCNGG	8 cut(s)	250, 456, 489, 555, 1400, 1527, 2291, 2903
Bme18I	GGWCC	3 cut(s)	252, 1024, 1513
BmgBI	CACGTC	1 cut(s)	758
BmgT120I	GGNCC	5 cut(s)	252, 1024, 1513, 1523, 2253
BmiI	GGNNCC	4 cut(s)	113, 453, 1077, 1121
BmrFI	CCNGG	8 cut(s)	250, 456, 489, 555, 1400, 1527, 2291, 2903
BmrI	ACTGGG	1 cut(s)	288
BmuI	ACTGGG	1 cut(s)	288
BpiI	GAAGAC	3 cut(s)	1415, 1461, 1494
BplI	GAGNNNNNCTC	4 cut(s)	351, 383, 1655, 1687
BpmI	CTGGAG	2 cut(s)	232, 1095
Bpu10I	CCTNAGC	3 cut(s)	615, 2715, 2968
Bpu1102I	GCTNAGC	1 cut(s)	2328
BpuEI	CTTGAG	3 cut(s)	230, 1173, 1657
BsaAI	YACGTR	2 cut(s)	353, 2248
BsaBI	GATNNNNATC	2 cut(s)	450, 1647
BsaJI	CCNNGG	9 cut(s)	472, 730, 855, 1295, 1525, 1543, 2834, 2877, 2945
BsaWI	WCCGGW	1 cut(s)	2542
Bse118I	RCCGGY	2 cut(s)	424, 2607
Bse1I	ACTGG	3 cut(s)	283, 947, 1631
Bse3DI	GCAATG	1 cut(s)	174
Bse8I	GATNNNNATC	2 cut(s)	450, 1647
BseAI	TCCGGA	1 cut(s)	2542
BseBI	CCWGG	8 cut(s)	250, 456, 489, 555, 1400, 1527, 2291, 2903
BseDI	CCNNGG	9 cut(s)	472, 730, 855, 1295, 1525, 1543, 2834, 2877, 2945
BseGI	GGATG	8 cut(s)	31, 813, 865, 1540, 1648, 1828, 2941, 2967
BseJI	GATNNNNATC	2 cut(s)	450, 1647
BseMI	GCAATG	1 cut(s)	174
BseMII	CTCAG	7 cut(s)	533, 1467, 2319, 2451, 2706, 2735, 2982
BseNI	ACTGG	3 cut(s)	283, 947, 1631
BsePI	GCGCGC	1 cut(s)	839
BseRI	GAGGAG	3 cut(s)	375, 2613, 2696
BseSI	GKGCMC	1 cut(s)	1859
BseYI	CCCAGC	1 cut(s)	2134
Bsh1236I	CGCG	4 cut(s)	841, 843, 2836, 2947
BshNI	GGYRCC	1 cut(s)	1119
BsiHKAI	GWGCWC	2 cut(s)	369, 500
BsiSI	CCGG	3 cut(s)	425, 2543, 2608
BslFI	GGGAC	1 cut(s)	278
BsmAI	GTCTC	3 cut(s)	710, 765, 2389
BsmBI	CGTCTC	1 cut(s)	2389
BsmFI	GGGAC	1 cut(s)	278
BsmI	GAATGC	2 cut(s)	1680, 1819
Bsp1286I	GDGCHC	4 cut(s)	369, 500, 1482, 1859
Bsp13I	TCCGGA	1 cut(s)	2542
Bsp1407I	TGTACA	1 cut(s)	2571
Bsp1720I	GCTNAGC	1 cut(s)	2328
Bsp19I	CCATGG	1 cut(s)	855
BspCNI	CTCAG	7 cut(s)	532, 1468, 2320, 2450, 2707, 2736, 2981
BspEI	TCCGGA	1 cut(s)	2542
BspFNI	CGCG	4 cut(s)	841, 843, 2836, 2947
BspLI	GGNNCC	4 cut(s)	113, 453, 1077, 1121
BspMAI	CTGCAG	1 cut(s)	1267
BspMI	ACCTGC	2 cut(s)	1035, 2982
BspPI	GGATC	8 cut(s)	144, 176, 446, 459, 872, 1594, 1656, 1964
BspT107I	GGYRCC	1 cut(s)	1119
BsrBI	CCGCTC	1 cut(s)	2803
BsrDI	GCAATG	1 cut(s)	174
BsrFI	RCCGGY	2 cut(s)	424, 2607
BsrGI	TGTACA	1 cut(s)	2571
BsrI	ACTGG	3 cut(s)	283, 947, 1631
BssAI	RCCGGY	2 cut(s)	424, 2607
BssECI	CCNNGG	9 cut(s)	472, 730, 855, 1295, 1525, 1543, 2834, 2877, 2945
BssHII	GCGCGC	1 cut(s)	839
BssT1I	CCWWGG	6 cut(s)	472, 730, 855, 1295, 1543, 2877
Bst2UI	CCWGG	8 cut(s)	250, 456, 489, 555, 1400, 1527, 2291, 2903
Bst4CI	ACNGT	8 cut(s)	1100, 1517, 1874, 1981, 1990, 2431, 2503, 2773
Bst6I	CTCTTC	1 cut(s)	2525
BstAUI	TGTACA	1 cut(s)	2571
BstBAI	YACGTR	2 cut(s)	353, 2248
BstDEI	CTNAG	9 cut(s)	519, 615, 1476, 2328, 2339, 2437, 2715, 2744, 2968
BstDSI	CCRYGG	3 cut(s)	855, 2834, 2945
BstF5I	GGATG	8 cut(s)	31, 813, 865, 1540, 1648, 1828, 2941, 2967
BstFNI	CGCG	4 cut(s)	841, 843, 2836, 2947
BstH2I	RGCGCY	1 cut(s)	39
BstHHI	GCGC	3 cut(s)	38, 841, 843
BstMAI	GTCTC	3 cut(s)	710, 765, 2389
BstMWI	GCNNNNNNNGC	9 cut(s)	590, 658, 1199, 1262, 1777, 2278, 2329, 2833, 2918
BstNI	CCWGG	8 cut(s)	250, 456, 489, 555, 1400, 1527, 2291, 2903
BstNSI	RCATGY	7 cut(s)	673, 988, 2206, 2281, 2365, 2482, 2578
BstSCI	CCNGG	8 cut(s)	248, 454, 487, 553, 1398, 1525, 2289, 2901
BstSFI	CTRYAG	6 cut(s)	907, 1263, 1572, 1977, 2451, 2841
BstSLI	GKGCMC	1 cut(s)	1859
BstSNI	TACGTA	1 cut(s)	2248
BstUI	CGCG	4 cut(s)	841, 843, 2836, 2947
BstV2I	GAAGAC	3 cut(s)	1415, 1461, 1494
BstX2I	RGATCY	3 cut(s)	136, 451, 2640
BstXI	CCANNNNNNTGG	1 cut(s)	1302
BstYI	RGATCY	3 cut(s)	136, 451, 2640
BsuI	GTATCC	2 cut(s)	1703, 2124
BtgI	CCRYGG	3 cut(s)	855, 2834, 2945
BtrI	CACGTC	1 cut(s)	758
BtsCI	GGATG	8 cut(s)	31, 813, 865, 1540, 1648, 1828, 2941, 2967
BtsI	GCAGTG	2 cut(s)	1272, 2225
BtsIMutI	CAGTG	6 cut(s)	276, 277, 1272, 2225, 2499, 2778
BveI	ACCTGC	2 cut(s)	1035, 2982
CaiI	CAGNNNCTG	2 cut(s)	488, 1637
CfoI	GCGC	3 cut(s)	38, 841, 843
Cfr10I	RCCGGY	2 cut(s)	424, 2607
Cfr13I	GGNCC	5 cut(s)	252, 1024, 1513, 1523, 2253
Cfr42I	CCGCGG	2 cut(s)	2837, 2948
CsiI	ACCWGGT	1 cut(s)	1398
Csp6I	GTAC	8 cut(s)	611, 673, 811, 1120, 1385, 1951, 2572, 2660
CspCI	CAANNNNNGTGG	2 cut(s)	2488, 2523
CviQI	GTAC	8 cut(s)	611, 673, 811, 1120, 1385, 1951, 2572, 2660
DdeI	CTNAG	9 cut(s)	519, 615, 1476, 2328, 2339, 2437, 2715, 2744, 2968
DraI	TTTAAA	1 cut(s)	1437
DraIII	CACNNNGTG	1 cut(s)	2798
DrdI	GACNNNNNNGTC	1 cut(s)	1496
DseDI	GACNNNNNNGTC	1 cut(s)	1496
EaeI	YGGCCR	3 cut(s)	103, 1888, 2035
Eam1104I	CTCTTC	1 cut(s)	2525
EarI	CTCTTC	1 cut(s)	2525
Ecl136II	GAGCTC	2 cut(s)	367, 498
Eco105I	TACGTA	1 cut(s)	2248
Eco130I	CCWWGG	6 cut(s)	472, 730, 855, 1295, 1543, 2877
Eco147I	AGGCCT	2 cut(s)	215, 459
Eco24I	GRGCYC	3 cut(s)	369, 500, 1482
Eco32I	GATATC	1 cut(s)	2618
Eco47I	GGWCC	3 cut(s)	252, 1024, 1513
Eco53kI	GAGCTC	2 cut(s)	367, 498
Eco57I	CTGAAG	5 cut(s)	666, 1406, 1845, 2584, 2792
Eco72I	CACGTG	1 cut(s)	353
EcoICRI	GAGCTC	2 cut(s)	367, 498
EcoO109I	RGGNCCY	3 cut(s)	252, 1024, 2253
EcoRI	GAATTC	2 cut(s)	283, 2763
EcoRII	CCWGG	8 cut(s)	248, 454, 487, 553, 1398, 1525, 2289, 2901
EcoRV	GATATC	1 cut(s)	2618
EcoT14I	CCWWGG	6 cut(s)	472, 730, 855, 1295, 1543, 2877
EcoT22I	ATGCAT	3 cut(s)	82, 1216, 1375
EcoT38I	GRGCYC	3 cut(s)	369, 500, 1482
ErhI	CCWWGG	6 cut(s)	472, 730, 855, 1295, 1543, 2877
Esp3I	CGTCTC	1 cut(s)	2389
FalI	AAGNNNNNCTT	2 cut(s)	1843, 1875
FaqI	GGGAC	1 cut(s)	278
FauI	CCCGC	2 cut(s)	2829, 2841
FauNDI	CATATG	1 cut(s)	1375
FbaI	TGATCA	2 cut(s)	445, 628
FblI	GTMKAC	2 cut(s)	222, 1730
FokI	GGATG	8 cut(s)	38, 820, 872, 1547, 1655, 1815, 2928, 2974
FriOI	GRGCYC	3 cut(s)	369, 500, 1482
GlaI	GCGC	3 cut(s)	37, 840, 842
GsaI	CCCAGC	1 cut(s)	2138
GsuI	CTGGAG	2 cut(s)	232, 1095
HaeII	RGCGCY	1 cut(s)	39
HapII	CCGG	3 cut(s)	425, 2543, 2608
HhaI	GCGC	3 cut(s)	38, 841, 843
Hin6I	GCGC	3 cut(s)	36, 839, 841
HinP1I	GCGC	3 cut(s)	36, 839, 841
HincII	GTYRAC	2 cut(s)	700, 1731
HindII	GTYRAC	2 cut(s)	700, 1731
HpaII	CCGG	3 cut(s)	425, 2543, 2608
HphI	GGTGA	8 cut(s)	1154, 1242, 2123, 2279, 2734, 2792, 2810, 2893
HpyAV	CCTTC	6 cut(s)	195, 370, 1845, 1983, 2266, 2338
HpyCH4III	ACNGT	8 cut(s)	1100, 1517, 1874, 1981, 1990, 2431, 2503, 2773
HpyCH4IV	ACGT	4 cut(s)	352, 757, 2247, 2284
HpyF10VI	GCNNNNNNNGC	9 cut(s)	590, 658, 1199, 1262, 1777, 2278, 2329, 2833, 2918
HpyF3I	CTNAG	9 cut(s)	519, 615, 1476, 2328, 2339, 2437, 2715, 2744, 2968
HpySE526I	ACGT	4 cut(s)	352, 757, 2247, 2284
HspAI	GCGC	3 cut(s)	36, 839, 841
Kpn2I	TCCGGA	1 cut(s)	2542
KpnI	GGTACC	1 cut(s)	1123
KroI	GCCGGC	1 cut(s)	424
KroNI	GCCGGC	1 cut(s)	426
Ksp22I	TGATCA	2 cut(s)	445, 628
KspI	CCGCGG	2 cut(s)	2837, 2948
LmnI	GCTCC	5 cut(s)	88, 490, 1114, 2388, 2400
MabI	ACCWGGT	1 cut(s)	1398
MaeII	ACGT	4 cut(s)	352, 757, 2247, 2284
MaeIII	GTNAC	8 cut(s)	274, 385, 862, 1745, 2285, 2828, 2854, 2890
MbiI	CCGCTC	1 cut(s)	2803
MflI	RGATCY	3 cut(s)	136, 451, 2640
MhlI	GDGCHC	4 cut(s)	369, 500, 1482, 1859
MlsI	TGGCCA	3 cut(s)	105, 1890, 2037
MluCI	AATT	8 cut(s)	283, 402, 897, 1050, 1432, 2052, 2410, 2763
MluNI	TGGCCA	3 cut(s)	105, 1890, 2037
MlyI	GAGTC	3 cut(s)	1726, 1736, 2369
Mox20I	TGGCCA	3 cut(s)	105, 1890, 2037
Mph1103I	ATGCAT	3 cut(s)	82, 1216, 1375
MroI	TCCGGA	1 cut(s)	2542
MroNI	GCCGGC	1 cut(s)	424
MroXI	GAANNNNTTC	3 cut(s)	1361, 2414, 2550
MscI	TGGCCA	3 cut(s)	105, 1890, 2037
MseI	TTAA	8 cut(s)	405, 711, 834, 1014, 1032, 1082, 1152, 1436
MslI	CAYNNNNRTG	5 cut(s)	419, 1224, 1689, 2477, 2667
Msp20I	TGGCCA	3 cut(s)	105, 1890, 2037
MspA1I	CMGCKG	5 cut(s)	1256, 2119, 2138, 2836, 2947
MspI	CCGG	3 cut(s)	425, 2543, 2608
MspR9I	CCNGG	8 cut(s)	250, 456, 489, 555, 1400, 1527, 2291, 2903
Mva1269I	GAATGC	2 cut(s)	1680, 1819
MvaI	CCWGG	8 cut(s)	250, 456, 489, 555, 1400, 1527, 2291, 2903
MvnI	CGCG	4 cut(s)	841, 843, 2836, 2947
MwoI	GCNNNNNNNGC	9 cut(s)	590, 658, 1199, 1262, 1777, 2278, 2329, 2833, 2918
NaeI	GCCGGC	1 cut(s)	426
NcoI	CCATGG	1 cut(s)	855
NdeI	CATATG	1 cut(s)	1375
NgoMIV	GCCGGC	1 cut(s)	424
NlaIV	GGNNCC	4 cut(s)	113, 453, 1077, 1121
NmeAIII	GCCGAG	1 cut(s)	348
NmuCI	GTSAC	6 cut(s)	274, 1745, 2285, 2828, 2854, 2890
NsiI	ATGCAT	3 cut(s)	82, 1216, 1375
NspI	RCATGY	7 cut(s)	673, 988, 2206, 2281, 2365, 2482, 2578
PaeI	GCATGC	1 cut(s)	988
PauI	GCGCGC	1 cut(s)	839
PceI	AGGCCT	2 cut(s)	215, 459
PciI	ACATGT	2 cut(s)	2361, 2574
PctI	GAATGC	2 cut(s)	1680, 1819
PdiI	GCCGGC	1 cut(s)	426
PdmI	GAANNNNTTC	3 cut(s)	1361, 2414, 2550
PfeI	GAWTC	9 cut(s)	434, 955, 1270, 1357, 1806, 2027, 2488, 2551, 2710
PflMI	CCANNNNNTGG	2 cut(s)	1787, 2908
PleI	GAGTC	3 cut(s)	1726, 1735, 2369
PmaCI	CACGTG	1 cut(s)	353
PmlI	CACGTG	1 cut(s)	353
PpsI	GAGTC	3 cut(s)	1726, 1735, 2369
Ppu21I	YACGTR	2 cut(s)	353, 2248
PpuMI	RGGWCCY	2 cut(s)	252, 1024
PscI	ACATGT	2 cut(s)	2361, 2574
Psp124BI	GAGCTC	2 cut(s)	369, 500
Psp5II	RGGWCCY	2 cut(s)	252, 1024
Psp6I	CCWGG	8 cut(s)	248, 454, 487, 553, 1398, 1525, 2289, 2901
PspCI	CACGTG	1 cut(s)	353
PspFI	CCCAGC	1 cut(s)	2134
PspGI	CCWGG	8 cut(s)	248, 454, 487, 553, 1398, 1525, 2289, 2901
PspN4I	GGNNCC	4 cut(s)	113, 453, 1077, 1121
PspPI	GGNCC	5 cut(s)	252, 1024, 1513, 1523, 2253
PspPPI	RGGWCCY	2 cut(s)	252, 1024
PsrI	GAACNNNNNNTAC	6 cut(s)	2192, 2224, 2538, 2570, 2588, 2620
PstI	CTGCAG	1 cut(s)	1267
PstNI	CAGNNNCTG	2 cut(s)	488, 1637
PsuI	RGATCY	3 cut(s)	136, 451, 2640
PteI	GCGCGC	1 cut(s)	839
PvuII	CAGCTG	2 cut(s)	1256, 2138
RsaI	GTAC	8 cut(s)	612, 674, 812, 1121, 1386, 1952, 2573, 2661
RsaNI	GTAC	8 cut(s)	611, 673, 811, 1120, 1385, 1951, 2572, 2660
RseI	CAYNNNNRTG	5 cut(s)	419, 1224, 1689, 2477, 2667
SacI	GAGCTC	2 cut(s)	369, 500
SacII	CCGCGG	2 cut(s)	2837, 2948
SalI	GTCGAC	1 cut(s)	1729
SaqAI	TTAA	8 cut(s)	405, 711, 834, 1014, 1032, 1082, 1152, 1436
Sau96I	GGNCC	5 cut(s)	252, 1024, 1513, 1523, 2253
SchI	GAGTC	3 cut(s)	1726, 1736, 2369
ScrFI	CCNGG	8 cut(s)	250, 456, 489, 555, 1400, 1527, 2291, 2903
SduI	GDGCHC	4 cut(s)	369, 500, 1482, 1859
SexAI	ACCWGGT	1 cut(s)	1398
SfcI	CTRYAG	6 cut(s)	907, 1263, 1572, 1977, 2451, 2841
Sfr303I	CCGCGG	2 cut(s)	2837, 2948
SgrBI	CCGCGG	2 cut(s)	2837, 2948
SinI	GGWCC	3 cut(s)	252, 1024, 1513
SmiMI	CAYNNNNRTG	5 cut(s)	419, 1224, 1689, 2477, 2667
SmlI	CTYRAG	4 cut(s)	11, 209, 1188, 1672
SmoI	CTYRAG	4 cut(s)	11, 209, 1188, 1672
SnaBI	TACGTA	1 cut(s)	2248
SphI	GCATGC	1 cut(s)	988
Sse9I	AATT	8 cut(s)	283, 402, 897, 1050, 1432, 2052, 2410, 2763
SseBI	AGGCCT	2 cut(s)	215, 459
SstI	GAGCTC	2 cut(s)	369, 500
StuI	AGGCCT	2 cut(s)	215, 459
StyD4I	CCNGG	8 cut(s)	248, 454, 487, 553, 1398, 1525, 2289, 2901
StyI	CCWWGG	6 cut(s)	472, 730, 855, 1295, 1543, 2877
TaaI	ACNGT	8 cut(s)	1100, 1517, 1874, 1981, 1990, 2431, 2503, 2773
TaiI	ACGT	4 cut(s)	355, 760, 2250, 2287
TaqI	TCGA	6 cut(s)	801, 1429, 1730, 1920, 2688, 2953
TasI	AATT	8 cut(s)	283, 402, 897, 1050, 1432, 2052, 2410, 2763
TatI	WGTACW	5 cut(s)	672, 810, 1950, 2571, 2659
TauI	GCSGC	3 cut(s)	1680, 2097, 2806
TfiI	GAWTC	9 cut(s)	434, 955, 1270, 1357, 1806, 2027, 2488, 2551, 2710
Tru1I	TTAA	8 cut(s)	405, 711, 834, 1014, 1032, 1082, 1152, 1436
Tru9I	TTAA	8 cut(s)	405, 711, 834, 1014, 1032, 1082, 1152, 1436
TscAI	CASTG	6 cut(s)	277, 283, 1272, 2232, 2506, 2778
TseFI	GTSAC	6 cut(s)	274, 1745, 2285, 2828, 2854, 2890
Tsp45I	GTSAC	6 cut(s)	274, 1745, 2285, 2828, 2854, 2890
TspGWI	ACGGA	1 cut(s)	2413
TspRI	CASTG	6 cut(s)	277, 283, 1272, 2232, 2506, 2778
Van91I	CCANNNNNTGG	2 cut(s)	1787, 2908
VpaK11BI	GGWCC	3 cut(s)	252, 1024, 1513
XapI	RAATTY	4 cut(s)	283, 1432, 2410, 2763
XbaI	TCTAGA	1 cut(s)	1720
XceI	RCATGY	7 cut(s)	673, 988, 2206, 2281, 2365, 2482, 2578
XmiI	GTMKAC	2 cut(s)	222, 1730
XmnI	GAANNNNTTC	3 cut(s)	1361, 2414, 2550
Zsp2I	ATGCAT	3 cut(s)	82, 1216, 1375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.