Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Forward (+)

47244436 .. 47249297

Gene Structure 4862 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ57970

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3045 bp

ATGAGTAACCTCAAGTTAGGGGTGGAGGTCGTGGCTGCACATGACCTCATGCCCAAAGATGGACAGGGCTCAGCTAGTGCCTTTGTGGAGCTTCACTTTGATCATCAGAGATTCCGAACCAGTGTAAAAGAAAGAGATCTCAATCCTGTCTGGAATGAAAGCTTTTACTTCAACGTTACTGATCCAAATGACCTCTCTAACCTAAGTCTCGAAGCCTTTGTTTACAACCATGGTAAATCCAACTCCAAATTATTCCTGGGGAAGGTTTGTCTTACTGGGACCTCATTTGTCCCATACTCTGATGCTTGTGTTTTGCACTATCCTTTGGAAAAGAGAGGTATTTTCTCACGTGTGAAGGGAGAGCTTGGCCTCAAAGTTTTTGTTACTGATGACCCGTCTATCAGATCCTCAAATCCACTTCCAGCAATGGACTCTTCGATGGATAGAGGTTCACGCCACACACATGGTCAAGCGCCCTTGCAACAAGTTCCAAATAATGTCCCAAACCCATTCTCTGACGACAGAGCTGATTCGAGACACACATTTCGTCACCTTCCAAATCCTACCATAGCACAACAGCAGAATATTCCTTCAGCGGCTACCCAGCCATCAGTGAACTATGGGATGCAGGAGATGAGGTCTGAACCACAGGGACCTCAAACTGTTCGCATGTACTCAGGTTCATCATCTCAACCTTCTGATTATATGCTTAAAGAGACGAGTCCTTTCCTTGGAGGGGGGCAAATTGTTGGTGGGCGGGTTATGCGTACCAACAGACCATCCAGCACCTATGACCTTGTTGAAAAGATGCAATACCTCTTTGTACGAGTTGTGAAAGCTCGCGATCTTCCTACAATGGATGTTACTGGAAGCCTTGATCCATATGTTGAAGTAAGAATAGGGAACTACAAAGGAGTTACAAAGCATTTTGAGAAGCAGAAGAACCCTGAATGGAATGAGGTGTTTGCCTTTGCAAAGGAAAATGAGCAAGCACATGTATTGGAGGTTGTGGTCAAAGACAAGGATCTTATGAAAGATGATTATGTTGGGTTTGTGCGGTTTGATCTCCATGAAGTTCCTACACGAGTTCCACCTGATAGTCCATTGGCTCCAGAATGGTATCGGATAGAAAACAAGAAAGGGGAGAAGAGGAATGGGGAACTGATGCTTGCTGTATGGTATGGCACACAAGCTGATGAGGCTTTTCCAGATGCATGGCATTCTGATGCAATTGGTCCTGATGATACTTCTTCGGCTACTTTTGCACATTCGCGCTCAAAAGTTTACCATTCACCACGATTATGGTATGTACGAGTAAATGTAATTGAGGCACAGGACTTGATTATATCTGACAGGTCTCGGTTCCCAGATGCATATGCAAAAGTACAAATTGGTAATCAGGTCTTAAAGACGAAAACAGTTCAAACTCGAATTCTGAACCCAATGTGGAATGAGGACCTGATGTTTGTTGCTGCTGAACCCTTTGATGACCATCTGATCATTTCAGTTGAAGATCGTGTTGGTTCAAACAAAGATGAGACCTTAGGAAGGGTTGTCATACCATTGAACACTGTTGAGAGGCGTGCTGATGATCGAAATATTCGTGGGCGGTGGTATAACCTTGAAAAGCACATGTCAGATGCCATGGAGCTGGAGGGAGAGCAGCGGAAGAAAGATAAAGAAAGAGATAAGTTTTCCAGCAGAATCCATCTTCGTATTTGTCTTGATGGAGGGTATCATGTGCTTGATGAGTCTACTCACTATAGTAGTGACCTTCGACCTACAGCTAAGCCGCTTTGGAAGTCATCCATTGGTGTCTTGGAGCTCGGAATTCTAAATGCTAATGGTCTACACCCAATGAAAACAAGGGATGGGAAGGGTACATCAGATACATATTGTGTAGCAAAGTATGGGCACAAATGGGTTCGTACTCGAACCATAAATAACAGTCTAAGCCCAAAGTACAATGAGCAGTACACTTGGGAGGTATTTGATCCTGCAACCGTTCTCACAGTGGGGGTTTTCGATAACTCTCAGATTTTTGGTAATTCAAATGGCAACAGAGATGTGAAAATTGGCAAGGTCAGGATTCGTATGTCTACCCTTGAGACTGGTCGCGTCTACACACACACTTACCCATTACTAGTCCTTCATCCTTCAGGTGTCAAGAAGATGGGTGAATTGCATCTTGCAATAAGATTTTCATGCACATCACTGGTTAACATGATGTTCAAATACTCTAGACCTCTTTTGCCGAAGATGCATTATGTAAGGCCGTTGACTGTGATGCAGCAAGACATGCTACGTCACCAAGCTGTCAACATAGTTGCAGCCCGGCTTAGTCGGGCGGAACCACCTCTTAGGAAGGAAGTGGTGGAATACATGTCTGATGCAGATTCTCATCTTTGGAGCATGAGGCGTAGCAAGGCAAACTTTTTCAGACTGATGACTGTATTTTCGGGATTGTTTGCTGTTGGAAAATGGTTTGGAGAAGTATGCATGTGGAAAAACCCCATCACAACAGCACTTGTACATGTTCTCTTTGTGATGCTTGTGTGCTTTCCTGAACTGATTTTGCCGACTGTTTTCCTGTACATGTTTCTAATTGGGATTTGGAATTTCCGATATCGCCCAAGGTACCCTCCTCACATGAACACAAGGATCTCATATGCAGATGCCGTGCACCCAGATGAGCTTGATGAAGAATTCGACACATTTCCAACATCTAAGGGTTCAGATATAGTTCGGATGAGGTATGATCGCTTAAGGAGTGTTGCTGGAAGGATTCAAACGGTGGTGGGTGATGTTGCAACTCAAGGGGAGCGAATGCAGGCGCTTCTCAGCTGGCGGGATCCTCGTGCCACTATGTTATTTATCACATTCTGTCTTGTGGCTGCTATTGTGTTATACGTAACACCTTTCCAGGTTTTGGTTCTTCTCGGTGGGGTTTACTTCATGAGGCACCCCAGGTTCAGGCATAAGATGCCATCAGCCCCAGTTAACTTTTTCCGAAGGCTGCCAGCGAGGACGGATAGTATGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1014

Amino Acids

115.95

Weight (kDa)

9.09

Isoelectric Point (pI)

42.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	5 - 93	1.1e-18	C2 domain
C2	PF00168	272 - 373	4.1e-21	C2 domain
C2	PF00168	436 - 541	4.4e-22	C2 domain
C2	PF00168	605 - 714	3.1e-21	C2 domain
PRT_C	PF08372	859 - 1014	4.8e-82	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2637
AccB1I	GGYRCC	2 cut(s)	2637, 2961
AccB7I	CCANNNNNTGG	1 cut(s)	2929
AccI	GTMKAC	4 cut(s)	1754, 1849, 2099, 2121
AccII	CGCG	3 cut(s)	843, 1273, 2118
AciI	CCGC	8 cut(s)	596, 757, 1057, 1609, 1666, 1793, 2348, 2848
AclI	AACGTT	1 cut(s)	174
AclWI	GGATC	8 cut(s)	176, 399, 872, 1032, 1988, 2669, 2846, 2859
AcsI	RAATTY	4 cut(s)	1431, 1830, 2617, 2705
AcuI	CTGAAG	2 cut(s)	576, 2142
AcvI	CACGTG	1 cut(s)	350
AfiI	CCNNNNNNNGG	7 cut(s)	59, 262, 731, 736, 1548, 2929, 2973
AflII	CTTAAG	1 cut(s)	2764
AflIII	ACRYGT	6 cut(s)	349, 994, 1632, 2382, 2533, 2595
AhlI	ACTAGT	1 cut(s)	2143
AjnI	CCWGG	3 cut(s)	255, 2922, 2966
AjuI	GAANNNNNNNTTGG	2 cut(s)	1503, 1535
Alw21I	GWGCWC	2 cut(s)	1827, 2685
Alw26I	GTCTC	6 cut(s)	212, 529, 710, 1362, 1532, 2102
Alw44I	GTGCAC	1 cut(s)	2681
AlwI	GGATC	8 cut(s)	176, 399, 872, 1032, 1988, 2669, 2846, 2859
AoxI	GGCC	2 cut(s)	367, 2273
ApaLI	GTGCAC	1 cut(s)	2681
ApeKI	GCWGC	7 cut(s)	35, 1472, 1663, 2290, 2330, 2894, 3016
ApoI	RAATTY	4 cut(s)	1431, 1830, 2617, 2705
ArsI	GACNNNNNNTTYG	6 cut(s)	528, 560, 1448, 1480, 2440, 2472
Asp718I	GGTACC	1 cut(s)	2637
AspLEI	GCGC	3 cut(s)	475, 1275, 2836
AspS9I	GGNCC	4 cut(s)	279, 653, 1235, 1456
AsuC2I	CCSGG	1 cut(s)	2335
AsuHPI	GGTGA	5 cut(s)	542, 1284, 2189, 2300, 2813
AvaII	GGWCC	4 cut(s)	279, 653, 1235, 1456
AxyI	CCTNAGG	1 cut(s)	1543
BaeGI	GKGCMC	2 cut(s)	1917, 2685
BamHI	GGATCC	1 cut(s)	2851
BanI	GGYRCC	2 cut(s)	2637, 2961
BanII	GRGCYC	2 cut(s)	71, 1827
BauI	CACGAG	2 cut(s)	1083, 2856
BbrPI	CACGTG	1 cut(s)	350
Bbv12I	GWGCWC	2 cut(s)	1827, 2685
BbvI	GCAGC	7 cut(s)	22, 1459, 1675, 2302, 2342, 2881, 3003
BceAI	ACGGC	2 cut(s)	2260, 2663
BciT130I	CCWGG	3 cut(s)	257, 2924, 2968
BclI	TGATCA	2 cut(s)	100, 1497
BcnI	CCSGG	1 cut(s)	2335
BcoDI	GTCTC	6 cut(s)	212, 529, 710, 1362, 1532, 2102
BcuI	ACTAGT	1 cut(s)	2143
BfaI	CTAG	3 cut(s)	75, 2144, 2241
BfmI	CTRYAG	2 cut(s)	1762, 1782
BfoI	RGCGCY	2 cut(s)	476, 2837
BfrI	CTTAAG	1 cut(s)	2764
BglII	AGATCT	1 cut(s)	136
BisI	GCNGC	9 cut(s)	36, 597, 1473, 1664, 1793, 2291, 2331, 2895, 3017
BlpI	GCTNAGC	2 cut(s)	70, 1788
BlsI	GCNGC	9 cut(s)	37, 598, 1474, 1665, 1794, 2292, 2332, 2896, 3018
Bme1390I	CCNGG	4 cut(s)	257, 2335, 2924, 2968
Bme18I	GGWCC	4 cut(s)	279, 653, 1235, 1456
BmgT120I	GGNCC	4 cut(s)	279, 653, 1235, 1456
BmiI	GGNNCC	8 cut(s)	280, 654, 1110, 1364, 2352, 2639, 2853, 2963
BmrFI	CCNGG	4 cut(s)	257, 2335, 2924, 2968
BmrI	ACTGGG	2 cut(s)	285, 2990
BmuI	ACTGGG	2 cut(s)	285, 2990
BpmI	CTGGAG	2 cut(s)	1095, 1673
Bpu1102I	GCTNAGC	2 cut(s)	70, 1788
BpuEI	CTTGAG	2 cut(s)	2126, 2799
BpuMI	CCSGG	1 cut(s)	2335
BsaAI	YACGTR	2 cut(s)	350, 2911
BsaBI	GATNNNNATC	3 cut(s)	141, 1491, 2400
BsaI	GGTCTC	2 cut(s)	1362, 1532
BsaJI	CCNNGG	6 cut(s)	229, 256, 730, 1644, 2633, 2966
BsaXI	ACNNNNNCTCC	2 cut(s)	623, 653
Bsc4I	CCNNNNNNNGG	7 cut(s)	59, 262, 731, 736, 1548, 2929, 2973
Bse1I	ACTGG	6 cut(s)	120, 280, 871, 2116, 2220, 2996
Bse21I	CCTNAGG	1 cut(s)	1543
Bse3DI	GCAATG	1 cut(s)	432
Bse8I	GATNNNNATC	3 cut(s)	141, 1491, 2400
BseBI	CCWGG	3 cut(s)	257, 2924, 2968
BseDI	CCNNGG	6 cut(s)	229, 256, 730, 1644, 2633, 2966
BseGI	GGATG	7 cut(s)	630, 779, 865, 1805, 1876, 2152, 2754
BseJI	GATNNNNATC	3 cut(s)	141, 1491, 2400
BseLI	CCNNNNNNNGG	7 cut(s)	59, 262, 731, 736, 1548, 2929, 2973
BseMI	GCAATG	1 cut(s)	432
BseMII	CTCAG	4 cut(s)	84, 690, 2048, 2854
BseNI	ACTGG	6 cut(s)	120, 280, 871, 2116, 2220, 2996
BseRI	GAGGAG	1 cut(s)	2634
BseSI	GKGCMC	2 cut(s)	1917, 2685
BseXI	GCAGC	7 cut(s)	22, 1459, 1675, 2302, 2342, 2881, 3003
BseYI	CCCAGC	1 cut(s)	603
BsgI	GTGCAG	1 cut(s)	21
Bsh1236I	CGCG	3 cut(s)	843, 1273, 2118
BshFI	GGCC	2 cut(s)	369, 2275
BshNI	GGYRCC	2 cut(s)	2637, 2961
BsiHKAI	GWGCWC	2 cut(s)	1827, 2685
BsiSI	CCGG	1 cut(s)	2335
BslFI	GGGAC	4 cut(s)	275, 292, 485, 666
BslI	CCNNNNNNNGG	7 cut(s)	59, 262, 731, 736, 1548, 2929, 2973
BsmAI	GTCTC	6 cut(s)	212, 529, 710, 1362, 1532, 2102
BsmBI	CGTCTC	1 cut(s)	710
BsmFI	GGGAC	4 cut(s)	275, 292, 485, 666
BsmI	GAATGC	2 cut(s)	1219, 2832
BsnI	GGCC	2 cut(s)	369, 2275
Bso31I	GGTCTC	2 cut(s)	1362, 1532
Bsp1286I	GDGCHC	4 cut(s)	71, 1827, 1917, 2685
Bsp1407I	TGTACA	2 cut(s)	2530, 2592
Bsp1720I	GCTNAGC	2 cut(s)	70, 1788
Bsp19I	CCATGG	2 cut(s)	229, 1644
Bsp68I	TCGCGA	1 cut(s)	843
BspACI	CCGC	8 cut(s)	596, 757, 1057, 1609, 1666, 1793, 2348, 2848
BspANI	GGCC	2 cut(s)	369, 2275
BspCNI	CTCAG	4 cut(s)	83, 689, 2047, 2853
BspFNI	CGCG	3 cut(s)	843, 1273, 2118
BspHI	TCATGA	1 cut(s)	2955
BspLI	GGNNCC	8 cut(s)	280, 654, 1110, 1364, 2352, 2639, 2853, 2963
BspPI	GGATC	8 cut(s)	176, 399, 872, 1032, 1988, 2669, 2846, 2859
BspT107I	GGYRCC	2 cut(s)	2637, 2961
BspTI	CTTAAG	1 cut(s)	2764
BspTNI	GGTCTC	2 cut(s)	1362, 1532
BsrDI	GCAATG	1 cut(s)	432
BsrGI	TGTACA	2 cut(s)	2530, 2592
BsrI	ACTGG	6 cut(s)	120, 280, 871, 2116, 2220, 2996
BssECI	CCNNGG	6 cut(s)	229, 256, 730, 1644, 2633, 2966
BssSI	CACGAG	2 cut(s)	1083, 2856
BssT1I	CCWWGG	4 cut(s)	229, 730, 1644, 2633
Bst2BI	CACGAG	2 cut(s)	1083, 2856
Bst2UI	CCWGG	3 cut(s)	257, 2924, 2968
Bst6I	CTCTTC	2 cut(s)	439, 1142
BstAFI	CTTAAG	1 cut(s)	2764
BstAPI	GCANNNNNTGC	2 cut(s)	2299, 2983
BstAUI	TGTACA	2 cut(s)	2530, 2592
BstBAI	YACGTR	2 cut(s)	350, 2911
BstC8I	GCNNGC	7 cut(s)	841, 990, 1170, 1584, 2832, 2846, 3021
BstDSI	CCRYGG	2 cut(s)	229, 1644
BstENI	CCTNNNNNAGG	2 cut(s)	260, 1546
BstF5I	GGATG	7 cut(s)	630, 779, 865, 1805, 1876, 2152, 2754
BstFNI	CGCG	3 cut(s)	843, 1273, 2118
BstH2I	RGCGCY	2 cut(s)	476, 2837
BstHHI	GCGC	3 cut(s)	475, 1275, 2836
BstMAI	GTCTC	6 cut(s)	212, 529, 710, 1362, 1532, 2102
BstMWI	GCNNNNNNNGC	6 cut(s)	763, 1199, 1262, 2260, 2299, 2983
BstNI	CCWGG	3 cut(s)	257, 2924, 2968
BstNSI	RCATGY	8 cut(s)	673, 998, 1636, 2302, 2386, 2503, 2537, 2599
BstSCI	CCNGG	4 cut(s)	255, 2333, 2922, 2966
BstSFI	CTRYAG	2 cut(s)	1762, 1782
BstSLI	GKGCMC	2 cut(s)	1917, 2685
BstSNI	TACGTA	1 cut(s)	2911
BstUI	CGCG	3 cut(s)	843, 1273, 2118
BstV1I	GCAGC	7 cut(s)	22, 1459, 1675, 2302, 2342, 2881, 3003
BstX2I	RGATCY	5 cut(s)	136, 404, 1024, 2661, 2851
BstXI	CCANNNNNNTGG	4 cut(s)	464, 1215, 1302, 1651
BstYI	RGATCY	5 cut(s)	136, 404, 1024, 2661, 2851
Bsu36I	CCTNAGG	1 cut(s)	1543
BsuRI	GGCC	2 cut(s)	369, 2275
BtgI	CCRYGG	2 cut(s)	229, 1644
BtsCI	GGATG	7 cut(s)	630, 779, 865, 1805, 1876, 2152, 2754
BtsIMutI	CAGTG	5 cut(s)	127, 618, 1569, 2019, 2213
BtuMI	TCGCGA	1 cut(s)	843
Cac8I	GCNNGC	7 cut(s)	841, 990, 1170, 1584, 2832, 2846, 3021
CciI	TCATGA	1 cut(s)	2955
CfoI	GCGC	3 cut(s)	475, 1275, 2836
Cfr13I	GGNCC	4 cut(s)	279, 653, 1235, 1456
CseI	GACGC	1 cut(s)	2107
Eam1104I	CTCTTC	2 cut(s)	439, 1142
EarI	CTCTTC	2 cut(s)	439, 1142
EciI	GGCGGA	1 cut(s)	2363
Ecl136II	GAGCTC	1 cut(s)	1825
Eco105I	TACGTA	1 cut(s)	2911
Eco130I	CCWWGG	4 cut(s)	229, 730, 1644, 2633
Eco24I	GRGCYC	2 cut(s)	71, 1827
Eco31I	GGTCTC	2 cut(s)	1362, 1532
Eco32I	GATATC	1 cut(s)	2627
Eco47I	GGWCC	4 cut(s)	279, 653, 1235, 1456
Eco53kI	GAGCTC	1 cut(s)	1825
Eco57I	CTGAAG	2 cut(s)	576, 2142
Eco72I	CACGTG	1 cut(s)	350
Eco81I	CCTNAGG	1 cut(s)	1543
EcoICRI	GAGCTC	1 cut(s)	1825
EcoNI	CCTNNNNNAGG	2 cut(s)	260, 1546
EcoO109I	RGGNCCY	3 cut(s)	279, 653, 1456
EcoRI	GAATTC	3 cut(s)	1431, 1830, 2705
EcoRII	CCWGG	3 cut(s)	255, 2922, 2966
EcoRV	GATATC	1 cut(s)	2627
EcoT14I	CCWWGG	4 cut(s)	229, 730, 1644, 2633
EcoT22I	ATGCAT	4 cut(s)	1216, 1375, 2265, 2501
EcoT38I	GRGCYC	2 cut(s)	71, 1827
ErhI	CCWWGG	4 cut(s)	229, 730, 1644, 2633
Esp3I	CGTCTC	1 cut(s)	710
FalI	AAGNNNNNCTT	2 cut(s)	2417, 2449
FaqI	GGGAC	4 cut(s)	275, 292, 485, 666
FauI	CCCGC	2 cut(s)	750, 2841
FauNDI	CATATG	3 cut(s)	883, 1375, 2668
FbaI	TGATCA	2 cut(s)	100, 1497
FblI	GTMKAC	4 cut(s)	1754, 1849, 2099, 2121
Fnu4HI	GCNGC	9 cut(s)	36, 597, 1473, 1664, 1793, 2291, 2331, 2895, 3017
FokI	GGATG	7 cut(s)	637, 766, 872, 1792, 1883, 2139, 2761
FriOI	GRGCYC	2 cut(s)	71, 1827
Fsp4HI	GCNGC	9 cut(s)	36, 597, 1473, 1664, 1793, 2291, 2331, 2895, 3017
FspBI	CTAG	3 cut(s)	75, 2144, 2241
GlaI	GCGC	3 cut(s)	474, 1274, 2835
GluI	GCNGC	9 cut(s)	36, 597, 1473, 1664, 1793, 2291, 2331, 2895, 3017
GsaI	CCCAGC	1 cut(s)	607
GsuI	CTGGAG	2 cut(s)	1095, 1673
HaeII	RGCGCY	2 cut(s)	476, 2837
HaeIII	GGCC	2 cut(s)	369, 2275
HapII	CCGG	1 cut(s)	2335
HgaI	GACGC	1 cut(s)	2107
HhaI	GCGC	3 cut(s)	475, 1275, 2836
Hin6I	GCGC	3 cut(s)	473, 1273, 2834
HinP1I	GCGC	3 cut(s)	473, 1273, 2834
HincII	GTYRAC	4 cut(s)	2221, 2280, 2320, 3001
HindII	GTYRAC	4 cut(s)	2221, 2280, 2320, 3001
HindIII	AAGCTT	1 cut(s)	160
HinfI	GANTC	9 cut(s)	111, 431, 530, 721, 1704, 1751, 2089, 2396, 2785
HpaI	GTTAAC	2 cut(s)	2221, 3001
HpaII	CCGG	1 cut(s)	2335
HphI	GGTGA	5 cut(s)	542, 1284, 2189, 2300, 2813
HpyCH4IV	ACGT	4 cut(s)	174, 349, 2305, 2910
HpyF10VI	GCNNNNNNNGC	6 cut(s)	763, 1199, 1262, 2260, 2299, 2983
HpySE526I	ACGT	4 cut(s)	174, 349, 2305, 2910
HspAI	GCGC	3 cut(s)	473, 1273, 2834
KpnI	GGTACC	1 cut(s)	2641
Ksp22I	TGATCA	2 cut(s)	100, 1497
KspAI	GTTAAC	2 cut(s)	2221, 3001
LmnI	GCTCC	6 cut(s)	88, 1114, 1648, 1822, 2409, 2821
Lsp1109I	GCAGC	7 cut(s)	22, 1459, 1675, 2302, 2342, 2881, 3003
MaeI	CTAG	3 cut(s)	75, 2144, 2241
MaeII	ACGT	4 cut(s)	174, 349, 2305, 2910
MaeIII	GTNAC	9 cut(s)	5, 175, 382, 548, 862, 916, 1769, 2306, 2911
MfeI	CAATTG	1 cut(s)	1230
MflI	RGATCY	5 cut(s)	136, 404, 1024, 2661, 2851
MhlI	GDGCHC	4 cut(s)	71, 1827, 1917, 2685
MlyI	GAGTC	3 cut(s)	425, 730, 1760
MmeI	TCCRAC	3 cut(s)	264, 2455, 2744
Mph1103I	ATGCAT	4 cut(s)	1216, 1375, 2265, 2501
MseI	TTAA	5 cut(s)	711, 1406, 2220, 2765, 3000
MslI	CAYNNNNRTG	4 cut(s)	462, 1224, 1300, 2688
MspA1I	CMGCKG	3 cut(s)	596, 1666, 2844
MspCI	CTTAAG	1 cut(s)	2764
MspI	CCGG	1 cut(s)	2335
MspR9I	CCNGG	4 cut(s)	257, 2335, 2924, 2968
MunI	CAATTG	1 cut(s)	1230
Mva1269I	GAATGC	2 cut(s)	1219, 2832
MvaI	CCWGG	3 cut(s)	257, 2924, 2968
MvnI	CGCG	3 cut(s)	843, 1273, 2118
MwoI	GCNNNNNNNGC	6 cut(s)	763, 1199, 1262, 2260, 2299, 2983
NciI	CCSGG	1 cut(s)	2335
NcoI	CCATGG	2 cut(s)	229, 1644
NdeI	CATATG	3 cut(s)	883, 1375, 2668
NlaIV	GGNNCC	8 cut(s)	280, 654, 1110, 1364, 2352, 2639, 2853, 2963
NmuCI	GTSAC	3 cut(s)	548, 1769, 2306
NruI	TCGCGA	1 cut(s)	843
NsiI	ATGCAT	4 cut(s)	1216, 1375, 2265, 2501
NspI	RCATGY	8 cut(s)	673, 998, 1636, 2302, 2386, 2503, 2537, 2599
PagI	TCATGA	1 cut(s)	2955
PciI	ACATGT	5 cut(s)	994, 1632, 2382, 2533, 2595
PcsI	WCGNNNNNNNCGW	1 cut(s)	1600
PctI	GAATGC	2 cut(s)	1219, 2832
PfeI	GAWTC	6 cut(s)	111, 530, 1704, 2089, 2396, 2785
PflMI	CCANNNNNTGG	1 cut(s)	2929
PkrI	GCNGC	9 cut(s)	37, 598, 1474, 1665, 1794, 2292, 2332, 2896, 3018
PleI	GAGTC	3 cut(s)	425, 729, 1759
PmaCI	CACGTG	1 cut(s)	350
PmlI	CACGTG	1 cut(s)	350
PpsI	GAGTC	3 cut(s)	425, 729, 1759
Ppu21I	YACGTR	2 cut(s)	350, 2911
PpuMI	RGGWCCY	3 cut(s)	279, 653, 1456
PscI	ACATGT	5 cut(s)	994, 1632, 2382, 2533, 2595
Psp124BI	GAGCTC	1 cut(s)	1827
Psp1406I	AACGTT	1 cut(s)	174
Psp5II	RGGWCCY	3 cut(s)	279, 653, 1456
Psp6I	CCWGG	3 cut(s)	255, 2922, 2966
PspCI	CACGTG	1 cut(s)	350
PspFI	CCCAGC	1 cut(s)	603
PspGI	CCWGG	3 cut(s)	255, 2922, 2966
PspN4I	GGNNCC	8 cut(s)	280, 654, 1110, 1364, 2352, 2639, 2853, 2963
PspPI	GGNCC	4 cut(s)	279, 653, 1235, 1456
PspPPI	RGGWCCY	3 cut(s)	279, 653, 1456
PsuI	RGATCY	5 cut(s)	136, 404, 1024, 2661, 2851
PvuII	CAGCTG	1 cut(s)	2844
RruI	TCGCGA	1 cut(s)	843
RseI	CAYNNNNRTG	4 cut(s)	462, 1224, 1300, 2688
SacI	GAGCTC	1 cut(s)	1827
SaqAI	TTAA	5 cut(s)	711, 1406, 2220, 2765, 3000
SatI	GCNGC	9 cut(s)	36, 597, 1473, 1664, 1793, 2291, 2331, 2895, 3017
Sau96I	GGNCC	4 cut(s)	279, 653, 1235, 1456
SchI	GAGTC	3 cut(s)	425, 730, 1760
ScrFI	CCNGG	4 cut(s)	257, 2335, 2924, 2968
SduI	GDGCHC	4 cut(s)	71, 1827, 1917, 2685
SfcI	CTRYAG	2 cut(s)	1762, 1782
SinI	GGWCC	4 cut(s)	279, 653, 1235, 1456
SmiMI	CAYNNNNRTG	4 cut(s)	462, 1224, 1300, 2688
SmlI	CTYRAG	4 cut(s)	11, 2105, 2764, 2814
SmoI	CTYRAG	4 cut(s)	11, 2105, 2764, 2814
SnaBI	TACGTA	1 cut(s)	2911
SpeI	ACTAGT	1 cut(s)	2143
SsiI	CCGC	8 cut(s)	596, 757, 1057, 1609, 1666, 1793, 2348, 2848
SspI	AATATT	2 cut(s)	586, 1600
SspMI	CTAG	3 cut(s)	75, 2144, 2241
SstI	GAGCTC	1 cut(s)	1827
StyD4I	CCNGG	4 cut(s)	255, 2333, 2922, 2966
StyI	CCWWGG	4 cut(s)	229, 730, 1644, 2633
TaiI	ACGT	4 cut(s)	177, 352, 2308, 2913
TaqI	TCGA	9 cut(s)	210, 437, 533, 1429, 1594, 1777, 1933, 2025, 2709
TatI	WGTACW	6 cut(s)	672, 1384, 1962, 1974, 2530, 2592
TauI	GCSGC	2 cut(s)	599, 1795
TfiI	GAWTC	6 cut(s)	111, 530, 1704, 2089, 2396, 2785
Tru1I	TTAA	5 cut(s)	711, 1406, 2220, 2765, 3000
Tru9I	TTAA	5 cut(s)	711, 1406, 2220, 2765, 3000
TscAI	CASTG	5 cut(s)	127, 618, 1576, 2019, 2220
TseFI	GTSAC	3 cut(s)	548, 1769, 2306
TseI	GCWGC	7 cut(s)	35, 1472, 1663, 2290, 2330, 2894, 3016
Tsp45I	GTSAC	3 cut(s)	548, 1769, 2306
TspGWI	ACGGA	1 cut(s)	3044
TspRI	CASTG	5 cut(s)	127, 618, 1576, 2019, 2220
Van91I	CCANNNNNTGG	1 cut(s)	2929
Vha464I	CTTAAG	1 cut(s)	2764
VneI	GTGCAC	1 cut(s)	2681
VpaK11BI	GGWCC	4 cut(s)	279, 653, 1235, 1456
XagI	CCTNNNNNAGG	2 cut(s)	260, 1546
XapI	RAATTY	4 cut(s)	1431, 1830, 2617, 2705
XbaI	TCTAGA	1 cut(s)	2240
XceI	RCATGY	8 cut(s)	673, 998, 1636, 2302, 2386, 2503, 2537, 2599
XcmI	CCANNNNNNNNNTGG	2 cut(s)	253, 1816
XmiI	GTMKAC	4 cut(s)	1754, 1849, 2099, 2121
XspI	CTAG	3 cut(s)	75, 2144, 2241
Zsp2I	ATGCAT	4 cut(s)	1216, 1375, 2265, 2501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.