Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Forward (+)

46546282 .. 46551375

Gene Structure 5094 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G022010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3045 bp

ATGAGTAACCTCAAGTTAGGGGTGGAGGTCGTGGCTGCACATGACCTCATGCCCAAAGATGGACAGGGCTCAGCTAGTGCCTTTGTGGAGCTTCACTTTGATCATCAGAGATTCCGAACCAGTGTAAAAGAAAGAGATCTCAATCCTGTCTGGAATGAAAGCTTTTACTTCAACGTTACTGATCCAAATGACCTCTCTAACCTAAGTCTCGAAGCCTTTGTTTACAACCATGGTAAAGCCAACTCCAAATTATTCCTGGGGAAGGTTTGTCTTACTGGGACCTCATTTGTCCCATACTCTGATGCTTGTGTTTTGCACTATCCTTTGGAAAAGAGAGGTATTTTCTCACGTGTGAAGGGAGAGCTTGGCCTCAAAGTTTTTGTTACTGATGACCCGTCTATCAGATCCTCAAATCCACTTCCAGCAATGGACTCTTCGATGGATAGAGGTTCACGCCACACACATGGTCAAGCGCCCTTGCAACAAGTTCCAAATAATGTCCCAAACCCATTCTCTGACGACAGAGCTGATTCGAGACACACATTTCGTCACCTTCCAAATCCTACCATAGCACAACAGCAGAATATTCCTTCAGCGGCTACCCAGCCATCAGTGAACTATGGGATGCAGGAGATGAGGTCTGAACCACAGGGACCTCAAACTGTTCGCATGTACTCAGGTTCATCATCTCAACCTTCTGATTATATGCTTAAAGAGACGAGTCCTTTCCTTGGAGGGGGGCAAATTGTTGGTGGGCGGGTTATGCGTACCAACAGACCATCCAGCACCTATGACCTTGTTGAAAAGATGCAATACCTCTTTGTACGAGTTGTGAAAGCTCGCGATCTTCCTATGATGGATGTTACTGGAAGCCTTGATCCATATGTTGAAGTAAGAATAGGGAACTACAAAGGAGTTACAAAGCATTTTGAGAAGCAGAAGAACCCTGAATGGAATGAGGTGTTTGCCTTTGCAAAGGAAAATGAGCAAGCACATGTATTGGAGGTTGTGGTCAAAGACAAGGATCTTATGAAAGATGATTATGTTGGGTTTGTGCGGTTTGATCTCCATGAAGTTCCTACACGAGTTCCACCTGATAGTCCATTGGCTCCAGAATGGTATCGGATAGAAAACAAGAAAGGGGAGAAGAGGAATGGGGAACTGATGCTTGCTGTATGGTATGGCACACAAGCTGATGAGGCTTTTCCAGATGCATGGCATTCTGATGCAATTGGTCCTGATGATACTTCTTCGGCTACTTTTGCACATTCGCGCTCAAAAGTTTACCATTCACCACGATTATGGTATGTACGAGTAAATGTAATTGAGGCACAGGACTTGATTATATCTGACAGGTCTCGGTTCCCAGATGCATATGCAAAAGTACAAATTGGTAATCAGGTCCTAAAGACGAAAACAGTTCAAACTCGAATTCTGAACCCAATGTGGAATGAGGACCTGATGTTTGTTGCTGCTGAACCCTTTGATGACCATCTGATCATTTCAGTTGAAGATCGTGTTGGTTCAAACAAAGATGAGACCTTAGGAAGGGTTGTCATACCATTGAACACTGTTGAGAGGCGTGCTGATGATCGAAATATTCGTGGGCGGTGGTATAACCTTGAAAAGCACATGTCAGATGCCATGGAGCTGGAGGGAGAGCAGCGGAAGAAAGATAAAGAAAGAGATAGGTTTTCCAGCAGGATCCATCTTCGTATTTGTCTTGATGGAGGGTATCATGTGCTTGATGAGTCTACTCACTATAGTAGTGACCTTCGACCTACAGCTAAGCCGCTTTGGAAGTCATCCATTGGTGTCTTGGAGCTCGGAATTCTAAATGCTAATGGTCTACACCCAATGAAAACAAGGGATGGGAAGGGTACATCAGATACATATTGTGTAGCAAAGTATGGGCACAAATGGGTTCGTACTCGAACCATAAATAACAGTCTAAGCCCAAAGTACAATGAGCAGTACACTTGGGAGGTATTTGATCCTGCAACCGTTCTCACAGTGGGGGTTTTCGATAACTCTCAGATTTTTGGTAATTCAAATGGCAACAGAGATGTGAAAATTGGCAAGGTCAGGATTCGTATGTCTACCCTTGAGACTGGTCGCGTCTACACACACACTTACCCATTACTAGTCCTTCATCCTTCAGGTGTCAAGAAGATGGGTGAATTGCATCTTGCAATAAGATTTTCATGCACATCACTGGTTAACATGATGTTCAAATACTCTAGACCTCTTTTGCCGAAGATGCATTATGTAAGGCCGTTGACTGTGATGCAGCAAGACATGCTACGTCACCAAGCTGTCAACATAGTTGCAGCCCGGCTTAGTCGGGCGGAACCTCCTCTTAGGAAGGAAGTGGTGGAATACATGTCTGATGCAGATTCTCATCTTTGGAGCATGAGGCGTAGCAAGGCAAACTTTTTCAGACTGATGACTGTGTTTTCGGGATTGTTTGCTGTTGGAAAATGGTTTGGAGAAGTATGCATGTGGAAAAACCCCATCACAACAGCACTTGTACATGTTCTCTTTGTGATGCTTGTGTGCTTTCCTGAACTGATTTTGCCGACTGTTTTCCTGTACATGTTTCTGATTGGGATTTGGAATTTCCGACTTCGCCCAAGGTACCCTCCTCACATGAACACAAGGATCTCATATGCAGATGCCGTGCACCCAGATGAGCTTGATGAAGAATTCGACACATTTCCAACATCTAAGGGTTCAGATATGGTTCGGATGAGGTATGATCGCTTAAGGAGTGTTGCTGGAAGGATTCAAACGGTGGTGGGTGATGTTGCAACTCAAGGGGAGCGAATGCAGGCGCTTCTCAGCTGGCGGGATCCTCGTGCCACTATGTTATTTATCACATTCTGTCTTGTGGCTGCTATTGTGTTATACGTAACACCTTTCCAGGTTTTGGTTCTTCTTGGTGGGGTTTACTTCATGAGGCACCCCAGGTTCAGGCATAAGATGCCATCAGCCCCAGTTAACTTTTTCCGAAGGCTGCCAGCGAGGACAGATAGTATGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1014

Amino Acids

115.96

Weight (kDa)

9.09

Isoelectric Point (pI)

42.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	5 - 93	1.8e-18	C2 domain
C2	PF00168	272 - 373	5.6e-21	C2 domain
C2	PF00168	436 - 541	4.4e-22	C2 domain
C2	PF00168	605 - 714	3.1e-21	C2 domain
PRT_C	PF08372	859 - 1014	1.3e-81	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2637
AccB1I	GGYRCC	2 cut(s)	2637, 2961
AccB7I	CCANNNNNTGG	1 cut(s)	2929
AccI	GTMKAC	4 cut(s)	1754, 1849, 2099, 2121
AccII	CGCG	3 cut(s)	843, 1273, 2118
AciI	CCGC	8 cut(s)	596, 757, 1057, 1609, 1666, 1793, 2348, 2848
AclI	AACGTT	1 cut(s)	174
AcsI	RAATTY	4 cut(s)	1431, 1830, 2617, 2705
AcuI	CTGAAG	2 cut(s)	576, 2142
AcvI	CACGTG	1 cut(s)	350
AfiI	CCNNNNNNNGG	7 cut(s)	59, 262, 731, 736, 1548, 2929, 2973
AflII	CTTAAG	1 cut(s)	2764
AflIII	ACRYGT	6 cut(s)	349, 994, 1632, 2382, 2533, 2595
AhlI	ACTAGT	1 cut(s)	2143
AjnI	CCWGG	3 cut(s)	255, 2922, 2966
AjuI	GAANNNNNNNTTGG	2 cut(s)	1503, 1535
Alw21I	GWGCWC	2 cut(s)	1827, 2685
Alw26I	GTCTC	6 cut(s)	212, 529, 710, 1362, 1532, 2102
Alw44I	GTGCAC	1 cut(s)	2681
AoxI	GGCC	2 cut(s)	367, 2273
ApaLI	GTGCAC	1 cut(s)	2681
ApeKI	GCWGC	7 cut(s)	35, 1472, 1663, 2290, 2330, 2894, 3016
ApoI	RAATTY	4 cut(s)	1431, 1830, 2617, 2705
ArsI	GACNNNNNNTTYG	6 cut(s)	528, 560, 1448, 1480, 2440, 2472
Asp718I	GGTACC	1 cut(s)	2637
AspLEI	GCGC	3 cut(s)	475, 1275, 2836
AspS9I	GGNCC	5 cut(s)	279, 653, 1235, 1402, 1456
AsuC2I	CCSGG	1 cut(s)	2335
AsuHPI	GGTGA	5 cut(s)	542, 1284, 2189, 2300, 2813
AvaII	GGWCC	5 cut(s)	279, 653, 1235, 1402, 1456
AxyI	CCTNAGG	1 cut(s)	1543
BaeGI	GKGCMC	2 cut(s)	1917, 2685
BamHI	GGATCC	2 cut(s)	1704, 2851
BanI	GGYRCC	2 cut(s)	2637, 2961
BanII	GRGCYC	2 cut(s)	71, 1827
BauI	CACGAG	2 cut(s)	1083, 2856
BbrPI	CACGTG	1 cut(s)	350
Bbv12I	GWGCWC	2 cut(s)	1827, 2685
BbvI	GCAGC	7 cut(s)	22, 1459, 1675, 2302, 2342, 2881, 3003
BceAI	ACGGC	2 cut(s)	2260, 2663
BciT130I	CCWGG	3 cut(s)	257, 2924, 2968
BclI	TGATCA	2 cut(s)	100, 1497
BcnI	CCSGG	1 cut(s)	2335
BcoDI	GTCTC	6 cut(s)	212, 529, 710, 1362, 1532, 2102
BcuI	ACTAGT	1 cut(s)	2143
BfaI	CTAG	3 cut(s)	75, 2144, 2241
BfmI	CTRYAG	2 cut(s)	1762, 1782
BfoI	RGCGCY	2 cut(s)	476, 2837
BfrI	CTTAAG	1 cut(s)	2764
BglII	AGATCT	1 cut(s)	136
BisI	GCNGC	9 cut(s)	36, 597, 1473, 1664, 1793, 2291, 2331, 2895, 3017
BlpI	GCTNAGC	2 cut(s)	70, 1788
BlsI	GCNGC	9 cut(s)	37, 598, 1474, 1665, 1794, 2292, 2332, 2896, 3018
Bme1390I	CCNGG	4 cut(s)	257, 2335, 2924, 2968
Bme18I	GGWCC	5 cut(s)	279, 653, 1235, 1402, 1456
BmgT120I	GGNCC	5 cut(s)	279, 653, 1235, 1402, 1456
BmiI	GGNNCC	9 cut(s)	280, 654, 1110, 1364, 1706, 2352, 2639, 2853, 2963
BmrFI	CCNGG	4 cut(s)	257, 2335, 2924, 2968
BmrI	ACTGGG	2 cut(s)	285, 2990
BmuI	ACTGGG	2 cut(s)	285, 2990
BpmI	CTGGAG	2 cut(s)	1095, 1673
Bpu1102I	GCTNAGC	2 cut(s)	70, 1788
BpuEI	CTTGAG	2 cut(s)	2126, 2799
BpuMI	CCSGG	1 cut(s)	2335
BsaAI	YACGTR	2 cut(s)	350, 2911
BsaBI	GATNNNNATC	3 cut(s)	141, 1491, 2400
BsaI	GGTCTC	2 cut(s)	1362, 1532
BsaJI	CCNNGG	6 cut(s)	229, 256, 730, 1644, 2633, 2966
BsaXI	ACNNNNNCTCC	2 cut(s)	623, 653
Bsc4I	CCNNNNNNNGG	7 cut(s)	59, 262, 731, 736, 1548, 2929, 2973
Bse1I	ACTGG	6 cut(s)	120, 280, 871, 2116, 2220, 2996
Bse21I	CCTNAGG	1 cut(s)	1543
Bse3DI	GCAATG	1 cut(s)	432
Bse8I	GATNNNNATC	3 cut(s)	141, 1491, 2400
BseBI	CCWGG	3 cut(s)	257, 2924, 2968
BseDI	CCNNGG	6 cut(s)	229, 256, 730, 1644, 2633, 2966
BseGI	GGATG	7 cut(s)	630, 779, 865, 1805, 1876, 2152, 2754
BseJI	GATNNNNATC	3 cut(s)	141, 1491, 2400
BseLI	CCNNNNNNNGG	7 cut(s)	59, 262, 731, 736, 1548, 2929, 2973
BseMI	GCAATG	1 cut(s)	432
BseMII	CTCAG	4 cut(s)	84, 690, 2048, 2854
BseNI	ACTGG	6 cut(s)	120, 280, 871, 2116, 2220, 2996
BseRI	GAGGAG	2 cut(s)	2346, 2634
BseSI	GKGCMC	2 cut(s)	1917, 2685
BseXI	GCAGC	7 cut(s)	22, 1459, 1675, 2302, 2342, 2881, 3003
BseYI	CCCAGC	1 cut(s)	603
BsgI	GTGCAG	1 cut(s)	21
Bsh1236I	CGCG	3 cut(s)	843, 1273, 2118
BshFI	GGCC	2 cut(s)	369, 2275
BshNI	GGYRCC	2 cut(s)	2637, 2961
BsiHKAI	GWGCWC	2 cut(s)	1827, 2685
BsiSI	CCGG	1 cut(s)	2335
BslFI	GGGAC	4 cut(s)	275, 292, 485, 666
BslI	CCNNNNNNNGG	7 cut(s)	59, 262, 731, 736, 1548, 2929, 2973
BsmAI	GTCTC	6 cut(s)	212, 529, 710, 1362, 1532, 2102
BsmBI	CGTCTC	1 cut(s)	710
BsmFI	GGGAC	4 cut(s)	275, 292, 485, 666
BsmI	GAATGC	2 cut(s)	1219, 2832
BsnI	GGCC	2 cut(s)	369, 2275
Bso31I	GGTCTC	2 cut(s)	1362, 1532
Bsp1286I	GDGCHC	4 cut(s)	71, 1827, 1917, 2685
Bsp1407I	TGTACA	2 cut(s)	2530, 2592
Bsp1720I	GCTNAGC	2 cut(s)	70, 1788
Bsp19I	CCATGG	2 cut(s)	229, 1644
Bsp68I	TCGCGA	1 cut(s)	843
BspACI	CCGC	8 cut(s)	596, 757, 1057, 1609, 1666, 1793, 2348, 2848
BspANI	GGCC	2 cut(s)	369, 2275
BspCNI	CTCAG	4 cut(s)	83, 689, 2047, 2853
BspFNI	CGCG	3 cut(s)	843, 1273, 2118
BspHI	TCATGA	1 cut(s)	2955
BspLI	GGNNCC	9 cut(s)	280, 654, 1110, 1364, 1706, 2352, 2639, 2853, 2963
BspT107I	GGYRCC	2 cut(s)	2637, 2961
BspTI	CTTAAG	1 cut(s)	2764
BspTNI	GGTCTC	2 cut(s)	1362, 1532
BsrDI	GCAATG	1 cut(s)	432
BsrGI	TGTACA	2 cut(s)	2530, 2592
BsrI	ACTGG	6 cut(s)	120, 280, 871, 2116, 2220, 2996
BssECI	CCNNGG	6 cut(s)	229, 256, 730, 1644, 2633, 2966
BssSI	CACGAG	2 cut(s)	1083, 2856
BssT1I	CCWWGG	4 cut(s)	229, 730, 1644, 2633
Bst2BI	CACGAG	2 cut(s)	1083, 2856
Bst2UI	CCWGG	3 cut(s)	257, 2924, 2968
Bst6I	CTCTTC	2 cut(s)	439, 1142
BstAFI	CTTAAG	1 cut(s)	2764
BstAPI	GCANNNNNTGC	2 cut(s)	2299, 2983
BstAUI	TGTACA	2 cut(s)	2530, 2592
BstBAI	YACGTR	2 cut(s)	350, 2911
BstC8I	GCNNGC	7 cut(s)	841, 990, 1170, 1584, 2832, 2846, 3021
BstDSI	CCRYGG	2 cut(s)	229, 1644
BstENI	CCTNNNNNAGG	2 cut(s)	260, 1546
BstF5I	GGATG	7 cut(s)	630, 779, 865, 1805, 1876, 2152, 2754
BstFNI	CGCG	3 cut(s)	843, 1273, 2118
BstH2I	RGCGCY	2 cut(s)	476, 2837
BstHHI	GCGC	3 cut(s)	475, 1275, 2836
BstMAI	GTCTC	6 cut(s)	212, 529, 710, 1362, 1532, 2102
BstMWI	GCNNNNNNNGC	6 cut(s)	763, 1199, 1262, 2260, 2299, 2983
BstNI	CCWGG	3 cut(s)	257, 2924, 2968
BstNSI	RCATGY	8 cut(s)	673, 998, 1636, 2302, 2386, 2503, 2537, 2599
BstSCI	CCNGG	4 cut(s)	255, 2333, 2922, 2966
BstSFI	CTRYAG	2 cut(s)	1762, 1782
BstSLI	GKGCMC	2 cut(s)	1917, 2685
BstSNI	TACGTA	1 cut(s)	2911
BstUI	CGCG	3 cut(s)	843, 1273, 2118
BstV1I	GCAGC	7 cut(s)	22, 1459, 1675, 2302, 2342, 2881, 3003
BstX2I	RGATCY	6 cut(s)	136, 404, 1024, 1704, 2661, 2851
BstXI	CCANNNNNNTGG	4 cut(s)	464, 1215, 1302, 1651
BstYI	RGATCY	6 cut(s)	136, 404, 1024, 1704, 2661, 2851
Bsu36I	CCTNAGG	1 cut(s)	1543
BsuRI	GGCC	2 cut(s)	369, 2275
BtgI	CCRYGG	2 cut(s)	229, 1644
BtsCI	GGATG	7 cut(s)	630, 779, 865, 1805, 1876, 2152, 2754
BtsIMutI	CAGTG	5 cut(s)	127, 618, 1569, 2019, 2213
BtuMI	TCGCGA	1 cut(s)	843
Cac8I	GCNNGC	7 cut(s)	841, 990, 1170, 1584, 2832, 2846, 3021
CciI	TCATGA	1 cut(s)	2955
CfoI	GCGC	3 cut(s)	475, 1275, 2836
Cfr13I	GGNCC	5 cut(s)	279, 653, 1235, 1402, 1456
CseI	GACGC	1 cut(s)	2107
Eam1104I	CTCTTC	2 cut(s)	439, 1142
EarI	CTCTTC	2 cut(s)	439, 1142
EciI	GGCGGA	1 cut(s)	2363
Ecl136II	GAGCTC	1 cut(s)	1825
Eco105I	TACGTA	1 cut(s)	2911
Eco130I	CCWWGG	4 cut(s)	229, 730, 1644, 2633
Eco24I	GRGCYC	2 cut(s)	71, 1827
Eco31I	GGTCTC	2 cut(s)	1362, 1532
Eco47I	GGWCC	5 cut(s)	279, 653, 1235, 1402, 1456
Eco53kI	GAGCTC	1 cut(s)	1825
Eco57I	CTGAAG	2 cut(s)	576, 2142
Eco72I	CACGTG	1 cut(s)	350
Eco81I	CCTNAGG	1 cut(s)	1543
EcoICRI	GAGCTC	1 cut(s)	1825
EcoNI	CCTNNNNNAGG	2 cut(s)	260, 1546
EcoO109I	RGGNCCY	4 cut(s)	279, 653, 1402, 1456
EcoRI	GAATTC	3 cut(s)	1431, 1830, 2705
EcoRII	CCWGG	3 cut(s)	255, 2922, 2966
EcoT14I	CCWWGG	4 cut(s)	229, 730, 1644, 2633
EcoT22I	ATGCAT	4 cut(s)	1216, 1375, 2265, 2501
EcoT38I	GRGCYC	2 cut(s)	71, 1827
ErhI	CCWWGG	4 cut(s)	229, 730, 1644, 2633
Esp3I	CGTCTC	1 cut(s)	710
FalI	AAGNNNNNCTT	2 cut(s)	2417, 2449
FaqI	GGGAC	4 cut(s)	275, 292, 485, 666
FauI	CCCGC	2 cut(s)	750, 2841
FauNDI	CATATG	3 cut(s)	883, 1375, 2668
FbaI	TGATCA	2 cut(s)	100, 1497
FblI	GTMKAC	4 cut(s)	1754, 1849, 2099, 2121
Fnu4HI	GCNGC	9 cut(s)	36, 597, 1473, 1664, 1793, 2291, 2331, 2895, 3017
FokI	GGATG	7 cut(s)	637, 766, 872, 1792, 1883, 2139, 2761
FriOI	GRGCYC	2 cut(s)	71, 1827
Fsp4HI	GCNGC	9 cut(s)	36, 597, 1473, 1664, 1793, 2291, 2331, 2895, 3017
FspBI	CTAG	3 cut(s)	75, 2144, 2241
GlaI	GCGC	3 cut(s)	474, 1274, 2835
GluI	GCNGC	9 cut(s)	36, 597, 1473, 1664, 1793, 2291, 2331, 2895, 3017
GsaI	CCCAGC	1 cut(s)	607
GsuI	CTGGAG	2 cut(s)	1095, 1673
HaeII	RGCGCY	2 cut(s)	476, 2837
HaeIII	GGCC	2 cut(s)	369, 2275
HapII	CCGG	1 cut(s)	2335
HgaI	GACGC	1 cut(s)	2107
HhaI	GCGC	3 cut(s)	475, 1275, 2836
Hin6I	GCGC	3 cut(s)	473, 1273, 2834
HinP1I	GCGC	3 cut(s)	473, 1273, 2834
HincII	GTYRAC	4 cut(s)	2221, 2280, 2320, 3001
HindII	GTYRAC	4 cut(s)	2221, 2280, 2320, 3001
HindIII	AAGCTT	1 cut(s)	160
HinfI	GANTC	8 cut(s)	111, 431, 530, 721, 1751, 2089, 2396, 2785
HpaI	GTTAAC	2 cut(s)	2221, 3001
HpaII	CCGG	1 cut(s)	2335
HphI	GGTGA	5 cut(s)	542, 1284, 2189, 2300, 2813
HpyCH4IV	ACGT	4 cut(s)	174, 349, 2305, 2910
HpyF10VI	GCNNNNNNNGC	6 cut(s)	763, 1199, 1262, 2260, 2299, 2983
HpySE526I	ACGT	4 cut(s)	174, 349, 2305, 2910
HspAI	GCGC	3 cut(s)	473, 1273, 2834
KpnI	GGTACC	1 cut(s)	2641
Ksp22I	TGATCA	2 cut(s)	100, 1497
KspAI	GTTAAC	2 cut(s)	2221, 3001
LmnI	GCTCC	6 cut(s)	88, 1114, 1648, 1822, 2409, 2821
Lsp1109I	GCAGC	7 cut(s)	22, 1459, 1675, 2302, 2342, 2881, 3003
MaeI	CTAG	3 cut(s)	75, 2144, 2241
MaeII	ACGT	4 cut(s)	174, 349, 2305, 2910
MaeIII	GTNAC	9 cut(s)	5, 175, 382, 548, 862, 916, 1769, 2306, 2911
MfeI	CAATTG	1 cut(s)	1230
MflI	RGATCY	6 cut(s)	136, 404, 1024, 1704, 2661, 2851
MhlI	GDGCHC	4 cut(s)	71, 1827, 1917, 2685
MlyI	GAGTC	3 cut(s)	425, 730, 1760
MmeI	TCCRAC	3 cut(s)	2455, 2647, 2744
Mph1103I	ATGCAT	4 cut(s)	1216, 1375, 2265, 2501
MseI	TTAA	4 cut(s)	711, 2220, 2765, 3000
MslI	CAYNNNNRTG	4 cut(s)	462, 1224, 1300, 2688
MspA1I	CMGCKG	3 cut(s)	596, 1666, 2844
MspCI	CTTAAG	1 cut(s)	2764
MspI	CCGG	1 cut(s)	2335
MspR9I	CCNGG	4 cut(s)	257, 2335, 2924, 2968
MunI	CAATTG	1 cut(s)	1230
Mva1269I	GAATGC	2 cut(s)	1219, 2832
MvaI	CCWGG	3 cut(s)	257, 2924, 2968
MvnI	CGCG	3 cut(s)	843, 1273, 2118
MwoI	GCNNNNNNNGC	6 cut(s)	763, 1199, 1262, 2260, 2299, 2983
NciI	CCSGG	1 cut(s)	2335
NcoI	CCATGG	2 cut(s)	229, 1644
NdeI	CATATG	3 cut(s)	883, 1375, 2668
NlaIV	GGNNCC	9 cut(s)	280, 654, 1110, 1364, 1706, 2352, 2639, 2853, 2963
NmuCI	GTSAC	3 cut(s)	548, 1769, 2306
NruI	TCGCGA	1 cut(s)	843
NsiI	ATGCAT	4 cut(s)	1216, 1375, 2265, 2501
NspI	RCATGY	8 cut(s)	673, 998, 1636, 2302, 2386, 2503, 2537, 2599
PagI	TCATGA	1 cut(s)	2955
PciI	ACATGT	5 cut(s)	994, 1632, 2382, 2533, 2595
PcsI	WCGNNNNNNNCGW	1 cut(s)	1600
PctI	GAATGC	2 cut(s)	1219, 2832
PfeI	GAWTC	5 cut(s)	111, 530, 2089, 2396, 2785
PflMI	CCANNNNNTGG	1 cut(s)	2929
PkrI	GCNGC	9 cut(s)	37, 598, 1474, 1665, 1794, 2292, 2332, 2896, 3018
PleI	GAGTC	3 cut(s)	425, 729, 1759
PmaCI	CACGTG	1 cut(s)	350
PmlI	CACGTG	1 cut(s)	350
PpsI	GAGTC	3 cut(s)	425, 729, 1759
Ppu21I	YACGTR	2 cut(s)	350, 2911
PpuMI	RGGWCCY	4 cut(s)	279, 653, 1402, 1456
PscI	ACATGT	5 cut(s)	994, 1632, 2382, 2533, 2595
Psp124BI	GAGCTC	1 cut(s)	1827
Psp1406I	AACGTT	1 cut(s)	174
Psp5II	RGGWCCY	4 cut(s)	279, 653, 1402, 1456
Psp6I	CCWGG	3 cut(s)	255, 2922, 2966
PspCI	CACGTG	1 cut(s)	350
PspFI	CCCAGC	1 cut(s)	603
PspGI	CCWGG	3 cut(s)	255, 2922, 2966
PspN4I	GGNNCC	9 cut(s)	280, 654, 1110, 1364, 1706, 2352, 2639, 2853, 2963
PspPI	GGNCC	5 cut(s)	279, 653, 1235, 1402, 1456
PspPPI	RGGWCCY	4 cut(s)	279, 653, 1402, 1456
PsuI	RGATCY	6 cut(s)	136, 404, 1024, 1704, 2661, 2851
PvuII	CAGCTG	1 cut(s)	2844
RruI	TCGCGA	1 cut(s)	843
RseI	CAYNNNNRTG	4 cut(s)	462, 1224, 1300, 2688
SacI	GAGCTC	1 cut(s)	1827
SaqAI	TTAA	4 cut(s)	711, 2220, 2765, 3000
SatI	GCNGC	9 cut(s)	36, 597, 1473, 1664, 1793, 2291, 2331, 2895, 3017
Sau96I	GGNCC	5 cut(s)	279, 653, 1235, 1402, 1456
SchI	GAGTC	3 cut(s)	425, 730, 1760
ScrFI	CCNGG	4 cut(s)	257, 2335, 2924, 2968
SduI	GDGCHC	4 cut(s)	71, 1827, 1917, 2685
SfcI	CTRYAG	2 cut(s)	1762, 1782
SinI	GGWCC	5 cut(s)	279, 653, 1235, 1402, 1456
SmiMI	CAYNNNNRTG	4 cut(s)	462, 1224, 1300, 2688
SmlI	CTYRAG	4 cut(s)	11, 2105, 2764, 2814
SmoI	CTYRAG	4 cut(s)	11, 2105, 2764, 2814
SnaBI	TACGTA	1 cut(s)	2911
SpeI	ACTAGT	1 cut(s)	2143
SsiI	CCGC	8 cut(s)	596, 757, 1057, 1609, 1666, 1793, 2348, 2848
SspI	AATATT	2 cut(s)	586, 1600
SspMI	CTAG	3 cut(s)	75, 2144, 2241
SstI	GAGCTC	1 cut(s)	1827
StyD4I	CCNGG	4 cut(s)	255, 2333, 2922, 2966
StyI	CCWWGG	4 cut(s)	229, 730, 1644, 2633
TaiI	ACGT	4 cut(s)	177, 352, 2308, 2913
TaqI	TCGA	9 cut(s)	210, 437, 533, 1429, 1594, 1777, 1933, 2025, 2709
TatI	WGTACW	6 cut(s)	672, 1384, 1962, 1974, 2530, 2592
TauI	GCSGC	2 cut(s)	599, 1795
TfiI	GAWTC	5 cut(s)	111, 530, 2089, 2396, 2785
Tru1I	TTAA	4 cut(s)	711, 2220, 2765, 3000
Tru9I	TTAA	4 cut(s)	711, 2220, 2765, 3000
TscAI	CASTG	5 cut(s)	127, 618, 1576, 2019, 2220
TseFI	GTSAC	3 cut(s)	548, 1769, 2306
TseI	GCWGC	7 cut(s)	35, 1472, 1663, 2290, 2330, 2894, 3016
Tsp45I	GTSAC	3 cut(s)	548, 1769, 2306
TspRI	CASTG	5 cut(s)	127, 618, 1576, 2019, 2220
Van91I	CCANNNNNTGG	1 cut(s)	2929
Vha464I	CTTAAG	1 cut(s)	2764
VneI	GTGCAC	1 cut(s)	2681
VpaK11BI	GGWCC	5 cut(s)	279, 653, 1235, 1402, 1456
XagI	CCTNNNNNAGG	2 cut(s)	260, 1546
XapI	RAATTY	4 cut(s)	1431, 1830, 2617, 2705
XbaI	TCTAGA	1 cut(s)	2240
XceI	RCATGY	8 cut(s)	673, 998, 1636, 2302, 2386, 2503, 2537, 2599
XcmI	CCANNNNNNNNNTGG	2 cut(s)	253, 1816
XmiI	GTMKAC	4 cut(s)	1754, 1849, 2099, 2121
XspI	CTAG	3 cut(s)	75, 2144, 2241
Zsp2I	ATGCAT	4 cut(s)	1216, 1375, 2265, 2501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.