Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006991.1

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Reverse (-)

25466 .. 31371

Gene Structure 5906 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006991.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3393 bp

atgatccaagagagcaagtgcactggtttcaccttgactggtcatagtcaagaaaaagctgacgtggtgactggccatggaagaaacaggtttgcagcggaggattcttgcccgggcaaacttcaccccttcatgactacagccaaagaaatagtcaattccatgactatttccatgaccgatcaaggaaggaaaggccacacaagtccagccttcacctgtgagctttttctgaactcaaacctttcaagctctaaaacaaggttcttctttctttcttgccaatctctgcaagcaactagatatatatattcttccccagtattgcatcaatttgatcgaagtcccatgagtaacctcaagttaggggtggaggtcgtggctgcacatgacctcatgcccaaagatggacagggctcagctagtgcctttgtggagcttcactttgatcatcagagattccgaaccagtgtaaaagaaagagatctcaatcctgtctggaatgaaagcttttacttcaacgttactgatccaaatgacctctctaacctaagtctcgaagcctttgtttacaaccatggtaaatccaactccaaattattcctggggaaggtttgtcttactgggacctcatttgtcccatactctgatgcttgtgttttgcactatcctttggaaaagagaggtattttctcacgtgtgaagggagagcttggcctcaaagtttttgttactgatgacccgtctatcagatcctcaaatccacttccagcaatggactcttcgatggatagaggttcacgccacacacatggtcaagcgcccttgcaacaagttccaaataatgtcccaaacccattctctgacgacagagctgattcgagacacacatttcgtcaccttccaaatcctaccatagcacaacagcagaatattccttcagcggctacccagccatcagtgaactatgggatgcaggagatgaggtctgaaccacagggacctcaaactgttcgcatgtactcaggttcatcatctcaaccttctgattatatgcttaaagagacgagtcctttccttggaggggggcaaattgttggtgggcgggttatgcgtaccaacagaccatccagcacctatgaccttgttgaaaagatgcaatacctctttgtacgagttgtgaaagctcgcgatcttcctatgatggatgttactggaagccttgatccatatgttgaagtaagaatagggaactacaaaggagttacaaagcattttgagaagcagaagaaccctgaatggaatgaggtgtttgcctttgcaaaggaaaatgagcaagcacatgtattggaggttgtggtcaaagacaaggatcttatgaaagatgattatgttgggtttgtgcggtttgatctccatgaagttcctacacgagttccacctgatagtccattggctccagaatggtatcggatagaaaacaagaaaggggagaagaggaatggggaactgatgcttgctgtatggtatggcacacaagctgatgaggcttttccagatgcatggcattctgatgcaattggtcctgatgatacttcttcggctacttttgcacattcgcgctcaaaagtttaccattcaccacgattatggtatgtacgagtaaatgtaattgaggcacaggacttgattatatctgacaggtctcggttcccagatgcatatgcaaaagtacaaattggtaatcaggtcctaaagacgaaaacagttcaaactcgaattctgaacccaatgtggaatgaggacctgatgtttgttgctgctgaaccctttgatgaccatctgatcatttcagttgaagatcgtgttggttcaaacaaagatgagaccttaggaagggttgtcataccattgaacactgttgagaggcgtgctgatgatcgaaatattcgtgggcggtggtataaccttgaaaagcacatgtcagatgccatggagctggagggagagcagcggaagaaagataaagaaagagataggttttccagcaggatccatcttcgtatttgtcttgatggagggtatcatgtgcttgatgagtctactcactatagtagtgaccttcgacctacagctaagccgctttggaagtcatccattggtgtcttggagctcggaattctaaatgctaatggtctacacccaatgaaaacaagggatgggaagggtacatcagatacatattgtgtagcaaagtatgggcacaaatgggttcgtactcgaaccataaataacagtctaagcccaaagtacaatgagcagtacacttgggaggtatttgatcctgcaaccgttctcacagtgggggttttcgataactctcagatttttggtaattcaaatggcaacagagatgtgaaaattggcaaggtcaggattcgtatgtctacccttgagactggtcgcgtctacacacacacttacccattactagtccttcatccttcaggtgtcaagaagatgggtgaattgcatcttgcaataagattttcatgcacatcactggttaacatgatgttcaaatactctagacctcttttgccgaagatgcattatgtaaggccgttgactgtgatgcagcaagacatgctacgtcaccaagctgtcaacatagttgcagcccggcttagtcgggcggaaccacctcttaggaaggaagtggtggaatacatgtctgatgcagattctcatctttggagcatgaggcgtagcaaggcaaactttttcagactgatgactgtattttcgggattgtttgctgttggaaaatggtttggagaagtatgcatgtggaaaaaccccatcacaacagcacttgtacatgttctctttgtgatgcttgtgtgctttcctgaactgattttgccgactgttttcctgtacatgtttctgattgggatttggaatttccgatatcgcccaaggtaccctcctcacatgaacacaaggatctcatatgcagatgccgtgcacccagatgagcttgatgaagaattcgacacatttccaacatctaagggttcagatatagttcggatgaggtatgatcgcttaaggagtgttgctggaaggattcaaacggtggtgggtgatgttgcaactcaaggggagcgaatgcaggcgcttctcagctggcgggatcctcgtgccactatgttatttatcacattctgtcttgtggctgctattgtgttatacgtaacacctttccaggttttggttcttcttggtggggtttacttcatgaggcaccccaggttcaggcataagatgccatcagccccagttaactttttccgaaggctgccagcgaggacagatagtatgttgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1130

Amino Acids

128.9

Weight (kDa)

9.09

Isoelectric Point (pI)

43.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2985
AccB1I	GGYRCC	2 cut(s)	2985, 3309
AccB7I	CCANNNNNTGG	1 cut(s)	3277
AccI	GTMKAC	4 cut(s)	2102, 2197, 2447, 2469
AccII	CGCG	3 cut(s)	1191, 1621, 2466
AciI	CCGC	9 cut(s)	98, 944, 1105, 1405, 1957, 2014, 2141, 2696, 3196
AclI	AACGTT	1 cut(s)	522
AcoI	YGGCCR	1 cut(s)	73
AcsI	RAATTY	4 cut(s)	1779, 2178, 2965, 3053
AcuI	CTGAAG	2 cut(s)	924, 2490
AcvI	CACGTG	1 cut(s)	698
AfiI	CCNNNNNNNGG	7 cut(s)	407, 610, 1079, 1084, 1896, 3277, 3321
AflII	CTTAAG	1 cut(s)	3112
AflIII	ACRYGT	6 cut(s)	697, 1342, 1980, 2730, 2881, 2943
AhlI	ACTAGT	1 cut(s)	2491
AjiI	CACGTC	1 cut(s)	64
AjnI	CCWGG	3 cut(s)	603, 3270, 3314
AjuI	GAANNNNNNNTTGG	2 cut(s)	1851, 1883
Alw21I	GWGCWC	3 cut(s)	23, 2175, 3033
Alw26I	GTCTC	6 cut(s)	560, 877, 1058, 1710, 1880, 2450
Alw44I	GTGCAC	2 cut(s)	19, 3029
Ama87I	CYCGRG	1 cut(s)	112
AoxI	GGCC	4 cut(s)	73, 196, 715, 2621
ApaLI	GTGCAC	2 cut(s)	19, 3029
ApeKI	GCWGC	8 cut(s)	95, 383, 1820, 2011, 2638, 2678, 3242, 3364
ApoI	RAATTY	4 cut(s)	1779, 2178, 2965, 3053
ArsI	GACNNNNNNTTYG	8 cut(s)	138, 170, 876, 908, 1796, 1828, 2788, 2820
Asp718I	GGTACC	1 cut(s)	2985
AspLEI	GCGC	3 cut(s)	823, 1623, 3184
AspS9I	GGNCC	5 cut(s)	627, 1001, 1583, 1750, 1804
AsuC2I	CCSGG	3 cut(s)	113, 114, 2683
AsuHPI	GGTGA	9 cut(s)	22, 79, 116, 208, 890, 1632, 2537, 2648, 3161
AvaI	CYCGRG	1 cut(s)	112
AvaII	GGWCC	5 cut(s)	627, 1001, 1583, 1750, 1804
AxyI	CCTNAGG	1 cut(s)	1891
BaeGI	GKGCMC	3 cut(s)	23, 2265, 3033
BalI	TGGCCA	1 cut(s)	75
BamHI	GGATCC	2 cut(s)	2052, 3199
BanI	GGYRCC	2 cut(s)	2985, 3309
BanII	GRGCYC	2 cut(s)	419, 2175
BauI	CACGAG	2 cut(s)	1431, 3204
BbrPI	CACGTG	1 cut(s)	698
Bbv12I	GWGCWC	3 cut(s)	23, 2175, 3033
BbvI	GCAGC	8 cut(s)	107, 370, 1807, 2023, 2650, 2690, 3229, 3351
BceAI	ACGGC	2 cut(s)	2608, 3011
BciT130I	CCWGG	3 cut(s)	605, 3272, 3316
BclI	TGATCA	2 cut(s)	448, 1845
BcnI	CCSGG	3 cut(s)	113, 114, 2683
BcoDI	GTCTC	6 cut(s)	560, 877, 1058, 1710, 1880, 2450
BcuI	ACTAGT	1 cut(s)	2491
BfaI	CTAG	4 cut(s)	300, 423, 2492, 2589
BfmI	CTRYAG	3 cut(s)	138, 2110, 2130
BfoI	RGCGCY	2 cut(s)	824, 3185
BfrI	CTTAAG	1 cut(s)	3112
BglII	AGATCT	1 cut(s)	484
BlpI	GCTNAGC	2 cut(s)	418, 2136
Bme1390I	CCNGG	6 cut(s)	113, 114, 605, 2683, 3272, 3316
Bme18I	GGWCC	5 cut(s)	627, 1001, 1583, 1750, 1804
BmeT110I	CYCGRG	1 cut(s)	112
BmgBI	CACGTC	1 cut(s)	64
BmgT120I	GGNCC	5 cut(s)	627, 1001, 1583, 1750, 1804
BmiI	GGNNCC	9 cut(s)	628, 1002, 1458, 1712, 2054, 2700, 2987, 3201, 3311
BmrFI	CCNGG	6 cut(s)	113, 114, 605, 2683, 3272, 3316
BmrI	ACTGGG	3 cut(s)	314, 633, 3338
BmuI	ACTGGG	3 cut(s)	314, 633, 3338
BpmI	CTGGAG	2 cut(s)	1443, 2021
Bpu1102I	GCTNAGC	2 cut(s)	418, 2136
BpuEI	CTTGAG	3 cut(s)	344, 2474, 3147
BpuMI	CCSGG	3 cut(s)	113, 114, 2683
BsaAI	YACGTR	2 cut(s)	698, 3259
BsaBI	GATNNNNATC	3 cut(s)	489, 1839, 2748
BsaI	GGTCTC	2 cut(s)	1710, 1880
BsaJI	CCNNGG	8 cut(s)	76, 112, 577, 604, 1078, 1992, 2981, 3314
BsaXI	ACNNNNNCTCC	2 cut(s)	971, 1001
Bsc4I	CCNNNNNNNGG	7 cut(s)	407, 610, 1079, 1084, 1896, 3277, 3321
Bse21I	CCTNAGG	1 cut(s)	1891
Bse3DI	GCAATG	1 cut(s)	780
Bse8I	GATNNNNATC	3 cut(s)	489, 1839, 2748
BseBI	CCWGG	3 cut(s)	605, 3272, 3316
BseDI	CCNNGG	8 cut(s)	76, 112, 577, 604, 1078, 1992, 2981, 3314
BseGI	GGATG	7 cut(s)	978, 1127, 1213, 2153, 2224, 2500, 3102
BseJI	GATNNNNATC	3 cut(s)	489, 1839, 2748
BseLI	CCNNNNNNNGG	7 cut(s)	407, 610, 1079, 1084, 1896, 3277, 3321
BseMI	GCAATG	1 cut(s)	780
BseMII	CTCAG	4 cut(s)	432, 1038, 2396, 3202
BseRI	GAGGAG	1 cut(s)	2982
BseSI	GKGCMC	3 cut(s)	23, 2265, 3033
BseXI	GCAGC	8 cut(s)	107, 370, 1807, 2023, 2650, 2690, 3229, 3351
BseYI	CCCAGC	1 cut(s)	951
BsgI	GTGCAG	1 cut(s)	369
Bsh1236I	CGCG	3 cut(s)	1191, 1621, 2466
BshFI	GGCC	4 cut(s)	75, 198, 717, 2623
BshNI	GGYRCC	2 cut(s)	2985, 3309
BsiHKAI	GWGCWC	3 cut(s)	23, 2175, 3033
BsiHKCI	CYCGRG	1 cut(s)	112
BsiSI	CCGG	2 cut(s)	113, 2683
BslFI	GGGAC	5 cut(s)	330, 623, 640, 833, 1014
BslI	CCNNNNNNNGG	7 cut(s)	407, 610, 1079, 1084, 1896, 3277, 3321
BsmAI	GTCTC	6 cut(s)	560, 877, 1058, 1710, 1880, 2450
BsmBI	CGTCTC	1 cut(s)	1058
BsmFI	GGGAC	5 cut(s)	330, 623, 640, 833, 1014
BsmI	GAATGC	2 cut(s)	1567, 3180
BsnI	GGCC	4 cut(s)	75, 198, 717, 2623
Bso31I	GGTCTC	2 cut(s)	1710, 1880
BsoBI	CYCGRG	1 cut(s)	112
Bsp1286I	GDGCHC	5 cut(s)	23, 419, 2175, 2265, 3033
Bsp1407I	TGTACA	2 cut(s)	2878, 2940
Bsp1720I	GCTNAGC	2 cut(s)	418, 2136
Bsp19I	CCATGG	3 cut(s)	76, 577, 1992
Bsp68I	TCGCGA	1 cut(s)	1191
BspACI	CCGC	9 cut(s)	98, 944, 1105, 1405, 1957, 2014, 2141, 2696, 3196
BspANI	GGCC	4 cut(s)	75, 198, 717, 2623
BspCNI	CTCAG	4 cut(s)	431, 1037, 2395, 3201
BspFNI	CGCG	3 cut(s)	1191, 1621, 2466
BspHI	TCATGA	2 cut(s)	132, 3303
BspLI	GGNNCC	9 cut(s)	628, 1002, 1458, 1712, 2054, 2700, 2987, 3201, 3311
BspT107I	GGYRCC	2 cut(s)	2985, 3309
BspTI	CTTAAG	1 cut(s)	3112
BspTNI	GGTCTC	2 cut(s)	1710, 1880
BsrDI	GCAATG	1 cut(s)	780
BsrGI	TGTACA	2 cut(s)	2878, 2940
BssECI	CCNNGG	8 cut(s)	76, 112, 577, 604, 1078, 1992, 2981, 3314
BssSI	CACGAG	2 cut(s)	1431, 3204
BssT1I	CCWWGG	5 cut(s)	76, 577, 1078, 1992, 2981
Bst2BI	CACGAG	2 cut(s)	1431, 3204
Bst2UI	CCWGG	3 cut(s)	605, 3272, 3316
Bst6I	CTCTTC	2 cut(s)	787, 1490
BstAFI	CTTAAG	1 cut(s)	3112
BstAPI	GCANNNNNTGC	2 cut(s)	2647, 3331
BstAUI	TGTACA	2 cut(s)	2878, 2940
BstBAI	YACGTR	2 cut(s)	698, 3259
BstC8I	GCNNGC	8 cut(s)	294, 1189, 1338, 1518, 1932, 3180, 3194, 3369
BstDSI	CCRYGG	3 cut(s)	76, 577, 1992
BstENI	CCTNNNNNAGG	2 cut(s)	608, 1894
BstF5I	GGATG	7 cut(s)	978, 1127, 1213, 2153, 2224, 2500, 3102
BstFNI	CGCG	3 cut(s)	1191, 1621, 2466
BstH2I	RGCGCY	2 cut(s)	824, 3185
BstHHI	GCGC	3 cut(s)	823, 1623, 3184
BstMAI	GTCTC	6 cut(s)	560, 877, 1058, 1710, 1880, 2450
BstMWI	GCNNNNNNNGC	6 cut(s)	1111, 1547, 1610, 2608, 2647, 3331
BstNI	CCWGG	3 cut(s)	605, 3272, 3316
BstNSI	RCATGY	8 cut(s)	1021, 1346, 1984, 2650, 2734, 2851, 2885, 2947
BstSCI	CCNGG	6 cut(s)	111, 112, 603, 2681, 3270, 3314
BstSFI	CTRYAG	3 cut(s)	138, 2110, 2130
BstSLI	GKGCMC	3 cut(s)	23, 2265, 3033
BstSNI	TACGTA	1 cut(s)	3259
BstUI	CGCG	3 cut(s)	1191, 1621, 2466
BstV1I	GCAGC	8 cut(s)	107, 370, 1807, 2023, 2650, 2690, 3229, 3351
BstX2I	RGATCY	6 cut(s)	484, 752, 1372, 2052, 3009, 3199
BstXI	CCANNNNNNTGG	4 cut(s)	812, 1563, 1650, 1999
BstYI	RGATCY	6 cut(s)	484, 752, 1372, 2052, 3009, 3199
Bsu36I	CCTNAGG	1 cut(s)	1891
BsuRI	GGCC	4 cut(s)	75, 198, 717, 2623
BtgI	CCRYGG	3 cut(s)	76, 577, 1992
BtrI	CACGTC	1 cut(s)	64
BtsCI	GGATG	7 cut(s)	978, 1127, 1213, 2153, 2224, 2500, 3102
BtsIMutI	CAGTG	6 cut(s)	21, 475, 966, 1917, 2367, 2561
BtuMI	TCGCGA	1 cut(s)	1191
Cac8I	GCNNGC	8 cut(s)	294, 1189, 1338, 1518, 1932, 3180, 3194, 3369
CciI	TCATGA	2 cut(s)	132, 3303
CfoI	GCGC	3 cut(s)	823, 1623, 3184
Cfr13I	GGNCC	5 cut(s)	627, 1001, 1583, 1750, 1804
Cfr9I	CCCGGG	1 cut(s)	112
CseI	GACGC	1 cut(s)	2455
EaeI	YGGCCR	1 cut(s)	73
Eam1104I	CTCTTC	2 cut(s)	787, 1490
EarI	CTCTTC	2 cut(s)	787, 1490
EciI	GGCGGA	1 cut(s)	2711
Ecl136II	GAGCTC	1 cut(s)	2173
Eco105I	TACGTA	1 cut(s)	3259
Eco130I	CCWWGG	5 cut(s)	76, 577, 1078, 1992, 2981
Eco24I	GRGCYC	2 cut(s)	419, 2175
Eco31I	GGTCTC	2 cut(s)	1710, 1880
Eco32I	GATATC	1 cut(s)	2975
Eco47I	GGWCC	5 cut(s)	627, 1001, 1583, 1750, 1804
Eco53kI	GAGCTC	1 cut(s)	2173
Eco57I	CTGAAG	2 cut(s)	924, 2490
Eco72I	CACGTG	1 cut(s)	698
Eco81I	CCTNAGG	1 cut(s)	1891
Eco88I	CYCGRG	1 cut(s)	112
EcoICRI	GAGCTC	1 cut(s)	2173
EcoNI	CCTNNNNNAGG	2 cut(s)	608, 1894
EcoO109I	RGGNCCY	4 cut(s)	627, 1001, 1750, 1804
EcoRI	GAATTC	3 cut(s)	1779, 2178, 3053
EcoRII	CCWGG	3 cut(s)	603, 3270, 3314
EcoRV	GATATC	1 cut(s)	2975
EcoT14I	CCWWGG	5 cut(s)	76, 577, 1078, 1992, 2981
EcoT22I	ATGCAT	4 cut(s)	1564, 1723, 2613, 2849
EcoT38I	GRGCYC	2 cut(s)	419, 2175
ErhI	CCWWGG	5 cut(s)	76, 577, 1078, 1992, 2981
Esp3I	CGTCTC	1 cut(s)	1058
FalI	AAGNNNNNCTT	2 cut(s)	2765, 2797
FaqI	GGGAC	5 cut(s)	330, 623, 640, 833, 1014
FauI	CCCGC	2 cut(s)	1098, 3189
FauNDI	CATATG	3 cut(s)	1231, 1723, 3016
FbaI	TGATCA	2 cut(s)	448, 1845
FblI	GTMKAC	4 cut(s)	2102, 2197, 2447, 2469
FokI	GGATG	7 cut(s)	985, 1114, 1220, 2140, 2231, 2487, 3109
FriOI	GRGCYC	2 cut(s)	419, 2175
FspBI	CTAG	4 cut(s)	300, 423, 2492, 2589
GlaI	GCGC	3 cut(s)	822, 1622, 3183
GsaI	CCCAGC	1 cut(s)	955
GsuI	CTGGAG	2 cut(s)	1443, 2021
HaeII	RGCGCY	2 cut(s)	824, 3185
HaeIII	GGCC	4 cut(s)	75, 198, 717, 2623
HapII	CCGG	2 cut(s)	113, 2683
HgaI	GACGC	1 cut(s)	2455
HhaI	GCGC	3 cut(s)	823, 1623, 3184
Hin6I	GCGC	3 cut(s)	821, 1621, 3182
HinP1I	GCGC	3 cut(s)	821, 1621, 3182
HincII	GTYRAC	4 cut(s)	2569, 2628, 2668, 3349
HindII	GTYRAC	4 cut(s)	2569, 2628, 2668, 3349
HindIII	AAGCTT	1 cut(s)	508
HinfI	GANTC	9 cut(s)	104, 459, 779, 878, 1069, 2099, 2437, 2744, 3133
HpaI	GTTAAC	2 cut(s)	2569, 3349
HpaII	CCGG	2 cut(s)	113, 2683
HphI	GGTGA	9 cut(s)	22, 79, 116, 208, 890, 1632, 2537, 2648, 3161
HpyCH4IV	ACGT	5 cut(s)	63, 522, 697, 2653, 3258
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1111, 1547, 1610, 2608, 2647, 3331
HpySE526I	ACGT	5 cut(s)	63, 522, 697, 2653, 3258
HspAI	GCGC	3 cut(s)	821, 1621, 3182
KpnI	GGTACC	1 cut(s)	2989
Ksp22I	TGATCA	2 cut(s)	448, 1845
KspAI	GTTAAC	2 cut(s)	2569, 3349
LmnI	GCTCC	6 cut(s)	436, 1462, 1996, 2170, 2757, 3169
Lsp1109I	GCAGC	8 cut(s)	107, 370, 1807, 2023, 2650, 2690, 3229, 3351
MaeI	CTAG	4 cut(s)	300, 423, 2492, 2589
MaeII	ACGT	5 cut(s)	63, 522, 697, 2653, 3258
MfeI	CAATTG	1 cut(s)	1578
MflI	RGATCY	6 cut(s)	484, 752, 1372, 2052, 3009, 3199
MhlI	GDGCHC	5 cut(s)	23, 419, 2175, 2265, 3033
MlsI	TGGCCA	1 cut(s)	75
MluNI	TGGCCA	1 cut(s)	75
MlyI	GAGTC	3 cut(s)	773, 1078, 2108
MmeI	TCCRAC	3 cut(s)	612, 2803, 3092
Mox20I	TGGCCA	1 cut(s)	75
Mph1103I	ATGCAT	4 cut(s)	1564, 1723, 2613, 2849
MscI	TGGCCA	1 cut(s)	75
MseI	TTAA	4 cut(s)	1059, 2568, 3113, 3348
MslI	CAYNNNNRTG	4 cut(s)	810, 1572, 1648, 3036
Msp20I	TGGCCA	1 cut(s)	75
MspA1I	CMGCKG	4 cut(s)	98, 944, 2014, 3192
MspCI	CTTAAG	1 cut(s)	3112
MspI	CCGG	2 cut(s)	113, 2683
MspR9I	CCNGG	6 cut(s)	113, 114, 605, 2683, 3272, 3316
MunI	CAATTG	1 cut(s)	1578
Mva1269I	GAATGC	2 cut(s)	1567, 3180
MvaI	CCWGG	3 cut(s)	605, 3272, 3316
MvnI	CGCG	3 cut(s)	1191, 1621, 2466
MwoI	GCNNNNNNNGC	6 cut(s)	1111, 1547, 1610, 2608, 2647, 3331
NciI	CCSGG	3 cut(s)	113, 114, 2683
NcoI	CCATGG	3 cut(s)	76, 577, 1992
NdeI	CATATG	3 cut(s)	1231, 1723, 3016
NlaIV	GGNNCC	9 cut(s)	628, 1002, 1458, 1712, 2054, 2700, 2987, 3201, 3311
NmuCI	GTSAC	4 cut(s)	67, 896, 2117, 2654
NruI	TCGCGA	1 cut(s)	1191
NsiI	ATGCAT	4 cut(s)	1564, 1723, 2613, 2849
NspI	RCATGY	8 cut(s)	1021, 1346, 1984, 2650, 2734, 2851, 2885, 2947
PagI	TCATGA	2 cut(s)	132, 3303
PciI	ACATGT	5 cut(s)	1342, 1980, 2730, 2881, 2943
PcsI	WCGNNNNNNNCGW	1 cut(s)	1948
PctI	GAATGC	2 cut(s)	1567, 3180
PfeI	GAWTC	6 cut(s)	104, 459, 878, 2437, 2744, 3133
PflMI	CCANNNNNTGG	1 cut(s)	3277
PleI	GAGTC	3 cut(s)	773, 1077, 2107
PmaCI	CACGTG	1 cut(s)	698
PmlI	CACGTG	1 cut(s)	698
PpsI	GAGTC	3 cut(s)	773, 1077, 2107
Ppu21I	YACGTR	2 cut(s)	698, 3259
PpuMI	RGGWCCY	4 cut(s)	627, 1001, 1750, 1804
PscI	ACATGT	5 cut(s)	1342, 1980, 2730, 2881, 2943
Psp124BI	GAGCTC	1 cut(s)	2175
Psp1406I	AACGTT	1 cut(s)	522
Psp5II	RGGWCCY	4 cut(s)	627, 1001, 1750, 1804
Psp6I	CCWGG	3 cut(s)	603, 3270, 3314
PspCI	CACGTG	1 cut(s)	698
PspFI	CCCAGC	1 cut(s)	951
PspGI	CCWGG	3 cut(s)	603, 3270, 3314
PspN4I	GGNNCC	9 cut(s)	628, 1002, 1458, 1712, 2054, 2700, 2987, 3201, 3311
PspPI	GGNCC	5 cut(s)	627, 1001, 1583, 1750, 1804
PspPPI	RGGWCCY	4 cut(s)	627, 1001, 1750, 1804
PsuI	RGATCY	6 cut(s)	484, 752, 1372, 2052, 3009, 3199
PvuII	CAGCTG	1 cut(s)	3192
RruI	TCGCGA	1 cut(s)	1191
RseI	CAYNNNNRTG	4 cut(s)	810, 1572, 1648, 3036
SacI	GAGCTC	1 cut(s)	2175
SaqAI	TTAA	4 cut(s)	1059, 2568, 3113, 3348
Sau96I	GGNCC	5 cut(s)	627, 1001, 1583, 1750, 1804
SchI	GAGTC	3 cut(s)	773, 1078, 2108
ScrFI	CCNGG	6 cut(s)	113, 114, 605, 2683, 3272, 3316
SduI	GDGCHC	5 cut(s)	23, 419, 2175, 2265, 3033
SfcI	CTRYAG	3 cut(s)	138, 2110, 2130
SinI	GGWCC	5 cut(s)	627, 1001, 1583, 1750, 1804
SmaI	CCCGGG	1 cut(s)	114
SmiMI	CAYNNNNRTG	4 cut(s)	810, 1572, 1648, 3036
SmlI	CTYRAG	4 cut(s)	359, 2453, 3112, 3162
SmoI	CTYRAG	4 cut(s)	359, 2453, 3112, 3162
SnaBI	TACGTA	1 cut(s)	3259
SpeI	ACTAGT	1 cut(s)	2491
SrfI	GCCCGGGC	1 cut(s)	114
SsiI	CCGC	9 cut(s)	98, 944, 1105, 1405, 1957, 2014, 2141, 2696, 3196
SspI	AATATT	2 cut(s)	934, 1948
SspMI	CTAG	4 cut(s)	300, 423, 2492, 2589
SstI	GAGCTC	1 cut(s)	2175
StyD4I	CCNGG	6 cut(s)	111, 112, 603, 2681, 3270, 3314
StyI	CCWWGG	5 cut(s)	76, 577, 1078, 1992, 2981
TaiI	ACGT	5 cut(s)	66, 525, 700, 2656, 3261
TaqII	GACCGA	1 cut(s)	194
TatI	WGTACW	6 cut(s)	1020, 1732, 2310, 2322, 2878, 2940
TauI	GCSGC	2 cut(s)	947, 2143
TfiI	GAWTC	6 cut(s)	104, 459, 878, 2437, 2744, 3133
Tru1I	TTAA	4 cut(s)	1059, 2568, 3113, 3348
Tru9I	TTAA	4 cut(s)	1059, 2568, 3113, 3348
TscAI	CASTG	6 cut(s)	28, 475, 966, 1924, 2367, 2568
TseFI	GTSAC	4 cut(s)	67, 896, 2117, 2654
TseI	GCWGC	8 cut(s)	95, 383, 1820, 2011, 2638, 2678, 3242, 3364
Tsp45I	GTSAC	4 cut(s)	67, 896, 2117, 2654
TspMI	CCCGGG	1 cut(s)	112
TspRI	CASTG	6 cut(s)	28, 475, 966, 1924, 2367, 2568
Van91I	CCANNNNNTGG	1 cut(s)	3277
Vha464I	CTTAAG	1 cut(s)	3112
VneI	GTGCAC	2 cut(s)	19, 3029
VpaK11BI	GGWCC	5 cut(s)	627, 1001, 1583, 1750, 1804
XagI	CCTNNNNNAGG	2 cut(s)	608, 1894
XapI	RAATTY	4 cut(s)	1779, 2178, 2965, 3053
XbaI	TCTAGA	1 cut(s)	2588
XceI	RCATGY	8 cut(s)	1021, 1346, 1984, 2650, 2734, 2851, 2885, 2947
XcmI	CCANNNNNNNNNTGG	2 cut(s)	601, 2164
XmaI	CCCGGG	1 cut(s)	112
XmiI	GTMKAC	4 cut(s)	2102, 2197, 2447, 2469
XspI	CTAG	4 cut(s)	300, 423, 2492, 2589
Zsp2I	ATGCAT	4 cut(s)	1564, 1723, 2613, 2849

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.