Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Forward (+)

14308932 .. 14311526

Gene Structure 2595 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g16030.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

ATGTCAATCCTGTTTGGAACGAAACCATCTTCTTTGATGTCTCCGATCCAAACCGCCTGCGTGACCTCGTTGTTGAGGCCAATGTTTTCCACAATGGAAATGCCAACTCCACAACTTTCCTTGGAAAGGTTTGTTTGCCTGGGACATTATTCGTTCCATGCTCTGATGCTGTTGTTTCGCGCCACCCTCTTAAAAAAAGAGGTATTTTCTGTTTCTCCCGCGCGCAAACCTCAACCGTCTGATTATCAGCCTGAAGAGACAAGTCCTTACTTGGGAGGGGGGAAGGTTGTTCGTGGGCGATTTGTGCGTGGAGACAGTCCAGTCATCAGCACCCATGAGCTTGTCGAAACAATGCATTACCTGTTTGTACGCGTTGTGAAGGCCCTCGACCTTTCTTGCCGTGACACATATGTGGAAGTGAAAGTTGGCAACTACAAAGAAATTACAAGAAATTTGGAGAGAAAGCAGAACCCTGAATGGAATGAGGTGTTTGCGTTTCCAAAGGAAAATCTGCAGTCATCTGAATTGGATGTTGTGGTCAAAGACAAGGAACTTGTAGATGGTGACTTTGTTGGGTCTGTGCAGTTTGCTCTCAATGAAGTTCCGACCCGAGTTCCACCTGATAGTCCAGTGCCTCCGGGAAGGCGTCAGGTAGTAGACAAGGATGGGAAGAAGAAAGGGGAACTCATGCTTGCTGTATGGTATGGCACTCAAGCTGATGAAGCTTTTCCAAATGCCTGGTATTCCGATGTAATTCTTCCTGCTGATACGTCTTCAGCTGCTTATACACATGTCCGCTCAAAAGTTTACCCTTCACCAAGATTATGGTATGTACGGGTAAACGTGATTGAGGCACGGGACTTGGTTGTACCTGACACATCTCGAATCCCAGTTGCATACGCAAGTATACAAATCGGTCATCAGTGTTTAAAGACAAAAGAAGTTCAATCTTTGAACCCAATGTGGAACGAGGAACTTATGTTTGTCACTGCCGAACCCTTTGATGATCAACATCTGATCGTTTCTGTTGAAGATCATGTATGTCCAGAGGAGACATTAGGAAGAGTTTCCATAGCATTGAACTCCGTTGAGAGGTGCGGTGAATCTGCCGATGATGATCAAATTATCTGTGGGCAGTGGTTTAACCTTGACATGTCTCTGTCAAATGTCATGGAGAGAGATATTGATCATAAGTTTTCCAGGAGAATCCATCTCCATGTTTGTCTAGATGGAGGGTACCATTTACTTGATGATTCTTCTAACTATTGCAACGACCTGCAGCAGCCTGTTGGTGTCTTAAAGCTCGGAGTTCTAAATGCCAAAGACCTAATGCCAATGAAAACAGAGACTGGGAAGGCTACAACTGACTCGTATTGTGTAGCGAAGTATGGCGACAAATGGGTTCGTACTCGAACCATAACTAACAGCACAAGTCCAAAATACAATGAGCCGTACACTTGGGAGGTATATGATCCTGTCTCATTTCTCACAGTGGGGGTTTTTAATAACGGGCAGATTGGCAATTCAAGTGGGAAAAAAGATAAAGAAATTGGCAAGGTCCGGATTCGAATCTCTACCCTCGAATCAGACCACTTGTACACACACTCTTATCCGTTGCTATCCGTTTCTTCTTCTGGTGTCAAGAAGACGGGCGAATTACATCTTGCAATAAGATATTCATGCATATCATTTGTGAATCTAATGTTGATTTACTCTCAACCTATTTCGGTAAAGATACAGCCAGGCACATTGAGGGACCAAGCTGTATTGGTGGTGGCAGATAGGCTTGCTCAGGTAGAACCACCTCTTGGGAAGGAAGTAGTTGAATACATGTACTCTGATGCTGCAGATGTTCATGCTTGGAGCATGAGGCGCAGCAAGGCAAACTTTTTCAGAATGATGTCTGTTTTATCACCATTCATTTCTGTTCGGAAATGGTTTGAAGAAGTATGTGCATGGAGAAGTCTCATTATAACAGTGCTAGTACATGTCCTGTTTGTGATGCTGGTGTGCACTCCGGAACTTACTTTGTCAACTGTTTTCCTATACACGTTCGTAATAGGGATTTCGAACTTCCGGGACCGCCCAAGACACCCTCCCCATGTGGACACAAGGCTCTCCCATGCAGACTATCCGCACCCTGATGAGCTTGATGAAGAATTTGACACATTTCCAACTTCACGACCAAATGATATAATTAGGATGAGGTACGACCGCTTGAGGAGTATTGCCGGAAGGATTCAAACGGTGGTGGGGGATGTTGCAATGATAGGGGAGAAGATTCAGGAACTTCTTAGTTGGCGGGATCCTCGCGCCACTTTTATATTCATCACATTCTGTCTTTTTGTTGCTATTGTGTTGTTTGTGACACCTTTGAAGGCTGTAGTTATTATTGCTGGGTTTTACTTAATGAGGCACCCAAGGTTCCGGCGTAGGCAACAAATGCCATCAGTCCTGGCTAACTTCTACAGAAGGTTGCCCACGAAGGCGGACTGTATTTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

835

Amino Acids

94.87

Weight (kDa)

7.07

Isoelectric Point (pI)

44.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1973, 2503
AasI	GACNNNNNNGTC	1 cut(s)	320
Acc36I	ACCTGC	1 cut(s)	1284
Acc65I	GGTACC	1 cut(s)	1236
AccB1I	GGYRCC	2 cut(s)	1236, 2415
AccB7I	CCANNNNNTGG	1 cut(s)	1808
AccBSI	CCGCTC	1 cut(s)	798
AccI	GTMKAC	2 cut(s)	657, 907
AccII	CGCG	5 cut(s)	180, 221, 223, 372, 2313
AccIII	TCCGGA	2 cut(s)	1560, 2017
AciI	CCGC	9 cut(s)	54, 219, 796, 1098, 2083, 2135, 2215, 2302, 2489
AclWI	GGATC	4 cut(s)	40, 1466, 2300, 2313
AcsI	RAATTY	2 cut(s)	451, 2159
AcuI	CTGAAG	2 cut(s)	273, 759
AcyI	GRCGYC	1 cut(s)	646
AfiI	CCNNNNNNNGG	4 cut(s)	126, 272, 1092, 1808
AflIII	ACRYGT	6 cut(s)	370, 790, 1152, 1830, 1987, 2049
AgsI	TTSAA	9 cut(s)	947, 955, 1031, 1081, 1527, 1826, 1943, 2243, 2377
AjnI	CCWGG	5 cut(s)	138, 737, 1199, 1741, 2454
AjuI	GAANNNNNNNTTGG	4 cut(s)	408, 440, 1791, 1823
AleI	CACNNNNGTG	1 cut(s)	410
AluBI	AGCT	7 cut(s)	340, 716, 725, 779, 1303, 1763, 2149
AluI	AGCT	7 cut(s)	340, 716, 725, 779, 1303, 1763, 2149
Alw21I	GWGCWC	1 cut(s)	2015
Alw26I	GTCTC	8 cut(s)	45, 251, 306, 1046, 1161, 1340, 1483, 1970
Alw44I	GTGCAC	1 cut(s)	2011
AlwI	GGATC	4 cut(s)	40, 1466, 2300, 2313
AlwNI	CAGNNNCTG	1 cut(s)	1349
Ama87I	CYCGRG	1 cut(s)	609
Aor13HI	TCCGGA	2 cut(s)	1560, 2017
AoxI	GGCC	2 cut(s)	77, 381
ApaLI	GTGCAC	1 cut(s)	2011
ApeKI	GCWGC	5 cut(s)	779, 1279, 1282, 1844, 1875
ApoI	RAATTY	2 cut(s)	451, 2159
Asp700I	GAANNNNTTC	2 cut(s)	726, 1066
Asp718I	GGTACC	1 cut(s)	1236
AspLEI	GCGC	5 cut(s)	182, 223, 225, 1875, 2315
AspS9I	GGNCC	4 cut(s)	382, 1558, 1756, 2080
AsuC2I	CCSGG	2 cut(s)	639, 2078
AsuHPI	GGTGA	4 cut(s)	575, 807, 1112, 1905
AsuII	TTCGAA	2 cut(s)	1567, 2069
AvaI	CYCGRG	1 cut(s)	609
AvaII	GGWCC	3 cut(s)	1558, 1756, 2080
BaeGI	GKGCMC	1 cut(s)	2015
BamHI	GGATCC	1 cut(s)	2305
BanI	GGYRCC	2 cut(s)	1236, 2415
BbsI	GAAGAC	2 cut(s)	765, 1652
Bbv12I	GWGCWC	1 cut(s)	2015
BbvI	GCAGC	5 cut(s)	766, 1291, 1294, 1831, 1887
BccI	CCATC	6 cut(s)	34, 554, 659, 1218, 1223, 2455
BceAI	ACGGC	2 cut(s)	384, 1435
BciT130I	CCWGG	5 cut(s)	140, 739, 1201, 1743, 2456
BclI	TGATCA	3 cut(s)	1006, 1117, 1186
BcnI	CCSGG	2 cut(s)	639, 2078
BcoDI	GTCTC	8 cut(s)	45, 251, 306, 1046, 1161, 1340, 1483, 1970
BfaI	CTAG	2 cut(s)	1226, 1982
BfmI	CTRYAG	5 cut(s)	512, 1277, 1845, 2382, 2467
BfuAI	ACCTGC	1 cut(s)	1284
BisI	GCNGC	5 cut(s)	780, 1280, 1283, 1845, 1876
BlsI	GCNGC	5 cut(s)	781, 1281, 1284, 1846, 1877
Bme1390I	CCNGG	7 cut(s)	140, 639, 739, 1201, 1743, 2078, 2456
Bme18I	GGWCC	3 cut(s)	1558, 1756, 2080
BmeT110I	CYCGRG	1 cut(s)	609
BmgT120I	GGNCC	4 cut(s)	382, 1558, 1756, 2080
BmiI	GGNNCC	6 cut(s)	1238, 1757, 2081, 2307, 2417, 2426
BmrFI	CCNGG	7 cut(s)	140, 639, 739, 1201, 1743, 2078, 2456
BmrI	ACTGGG	2 cut(s)	884, 1359
BmsI	GCATC	3 cut(s)	156, 1831, 1992
BmuI	ACTGGG	2 cut(s)	884, 1359
BpiI	GAAGAC	2 cut(s)	765, 1652
Bpu10I	CCTNAGC	1 cut(s)	1791
Bpu14I	TTCGAA	2 cut(s)	1567, 2069
BpuEI	CTTGAG	2 cut(s)	696, 2239
BpuMI	CCSGG	2 cut(s)	639, 2078
BsaBI	GATNNNNATC	4 cut(s)	1011, 1116, 1185, 1568
BsaHI	GRCGYC	1 cut(s)	646
BsaJI	CCNNGG	3 cut(s)	120, 139, 2420
BsaWI	WCCGGW	2 cut(s)	1560, 2017
Bsc4I	CCNNNNNNNGG	4 cut(s)	126, 272, 1092, 1808
Bse1I	ACTGG	4 cut(s)	320, 629, 890, 1354
Bse3DI	GCAATG	1 cut(s)	2271
Bse8I	GATNNNNATC	4 cut(s)	1011, 1116, 1185, 1568
BseAI	TCCGGA	2 cut(s)	1560, 2017
BseBI	CCWGG	5 cut(s)	140, 739, 1201, 1743, 2456
BseDI	CCNNGG	3 cut(s)	120, 139, 2420
BseGI	GGATG	4 cut(s)	535, 670, 2208, 2263
BseJI	GATNNNNATC	4 cut(s)	1011, 1116, 1185, 1568
BseLI	CCNNNNNNNGG	4 cut(s)	126, 272, 1092, 1808
BseMI	GCAATG	1 cut(s)	2271
BseMII	CTCAG	1 cut(s)	1805
BseNI	ACTGG	4 cut(s)	320, 629, 890, 1354
BsePI	GCGCGC	1 cut(s)	221
BseRI	GAGGAG	2 cut(s)	1064, 2236
BseSI	GKGCMC	1 cut(s)	2015
BseXI	GCAGC	5 cut(s)	766, 1291, 1294, 1831, 1887
BseYI	CCCAGC	1 cut(s)	2396
BsgI	GTGCAG	1 cut(s)	602
Bsh1236I	CGCG	5 cut(s)	180, 221, 223, 372, 2313
Bsh1285I	CGRYCG	1 cut(s)	2215
BshFI	GGCC	2 cut(s)	79, 383
BshNI	GGYRCC	2 cut(s)	1236, 2415
BsiEI	CGRYCG	1 cut(s)	2215
BsiHKAI	GWGCWC	1 cut(s)	2015
BsiHKCI	CYCGRG	1 cut(s)	609
BsiSI	CCGG	6 cut(s)	638, 1561, 2018, 2077, 2232, 2428
BslFI	GGGAC	4 cut(s)	156, 872, 1769, 2093
BslI	CCNNNNNNNGG	4 cut(s)	126, 272, 1092, 1808
BsmAI	GTCTC	8 cut(s)	45, 251, 306, 1046, 1161, 1340, 1483, 1970
BsmFI	GGGAC	4 cut(s)	156, 872, 1769, 2093
BsnI	GGCC	2 cut(s)	79, 383
BsoBI	CYCGRG	1 cut(s)	609
Bsp119I	TTCGAA	2 cut(s)	1567, 2069
Bsp1286I	GDGCHC	1 cut(s)	2015
Bsp13I	TCCGGA	2 cut(s)	1560, 2017
Bsp1407I	TGTACA	1 cut(s)	1596
Bsp143I	GATC	8 cut(s)	45, 1006, 1017, 1033, 1117, 1186, 1471, 2305
BspACI	CCGC	9 cut(s)	54, 219, 796, 1098, 2083, 2135, 2215, 2302, 2489
BspANI	GGCC	2 cut(s)	79, 383
BspCNI	CTCAG	1 cut(s)	1804
BspEI	TCCGGA	2 cut(s)	1560, 2017
BspFNI	CGCG	5 cut(s)	180, 221, 223, 372, 2313
BspLI	GGNNCC	6 cut(s)	1238, 1757, 2081, 2307, 2417, 2426
BspMAI	CTGCAG	3 cut(s)	516, 1281, 1849
BspMI	ACCTGC	1 cut(s)	1284
BspPI	GGATC	4 cut(s)	40, 1466, 2300, 2313
BspT104I	TTCGAA	2 cut(s)	1567, 2069
BspT107I	GGYRCC	2 cut(s)	1236, 2415
BsrBI	CCGCTC	1 cut(s)	798
BsrDI	GCAATG	1 cut(s)	2271
BsrGI	TGTACA	1 cut(s)	1596
BsrI	ACTGG	4 cut(s)	320, 629, 890, 1354
BssECI	CCNNGG	3 cut(s)	120, 139, 2420
BssHII	GCGCGC	1 cut(s)	221
BssMI	GATC	8 cut(s)	45, 1006, 1017, 1033, 1117, 1186, 1471, 2305
BssNAI	GTATAC	1 cut(s)	908
BssNI	GRCGYC	1 cut(s)	646
BssT1I	CCWWGG	2 cut(s)	120, 2420
Bst1107I	GTATAC	1 cut(s)	908
Bst2UI	CCWGG	5 cut(s)	140, 739, 1201, 1743, 2456
Bst4CI	ACNGT	7 cut(s)	237, 317, 1492, 1978, 2038, 2248, 2495
Bst6I	CTCTTC	2 cut(s)	249, 1057
BstACI	GRCGYC	1 cut(s)	646
BstAPI	GCANNNNNTGC	1 cut(s)	2443
BstAUI	TGTACA	1 cut(s)	1596
BstBI	TTCGAA	2 cut(s)	1567, 2069
BstC8I	GCNNGC	4 cut(s)	58, 223, 693, 1788
BstDEI	CTNAG	2 cut(s)	1791, 2294
BstENI	CCTNNNNNAGG	1 cut(s)	124
BstF5I	GGATG	4 cut(s)	535, 670, 2208, 2263
BstFNI	CGCG	5 cut(s)	180, 221, 223, 372, 2313
BstHHI	GCGC	5 cut(s)	182, 223, 225, 1875, 2315
BstKTI	GATC	8 cut(s)	48, 1009, 1020, 1036, 1120, 1189, 1474, 2308
BstMAI	GTCTC	8 cut(s)	45, 251, 306, 1046, 1161, 1340, 1483, 1970
BstMBI	GATC	8 cut(s)	45, 1006, 1017, 1033, 1117, 1186, 1471, 2305
BstMCI	CGRYCG	1 cut(s)	2215
BstMWI	GCNNNNNNNGC	4 cut(s)	304, 722, 1872, 2443
BstNI	CCWGG	5 cut(s)	140, 739, 1201, 1743, 2456
BstNSI	RCATGY	4 cut(s)	794, 1156, 1834, 1991
BstSCI	CCNGG	7 cut(s)	138, 637, 737, 1199, 1741, 2076, 2454
BstSFI	CTRYAG	5 cut(s)	512, 1277, 1845, 2382, 2467
BstSLI	GKGCMC	1 cut(s)	2015
BstUI	CGCG	5 cut(s)	180, 221, 223, 372, 2313
BstV1I	GCAGC	5 cut(s)	766, 1291, 1294, 1831, 1887
BstV2I	GAAGAC	2 cut(s)	765, 1652
BstX2I	RGATCY	1 cut(s)	2305
BstXI	CCANNNNNNTGG	2 cut(s)	738, 825
BstYI	RGATCY	1 cut(s)	2305
BstZ17I	GTATAC	1 cut(s)	908
BsuRI	GGCC	2 cut(s)	79, 383
BtsCI	GGATG	4 cut(s)	535, 670, 2208, 2263
BtsI	GCAGTG	2 cut(s)	987, 1142
BtsIMutI	CAGTG	6 cut(s)	636, 929, 987, 1142, 1497, 1983
BveI	ACCTGC	1 cut(s)	1284
Cac8I	GCNNGC	4 cut(s)	58, 223, 693, 1788
CaiI	CAGNNNCTG	1 cut(s)	1349
CfoI	GCGC	5 cut(s)	182, 223, 225, 1875, 2315
Cfr13I	GGNCC	4 cut(s)	382, 1558, 1756, 2080
CseI	GACGC	1 cut(s)	635
CspCI	CAANNNNNGTGG	2 cut(s)	1510, 1545
DdeI	CTNAG	2 cut(s)	1791, 2294
DpnI	GATC	8 cut(s)	47, 1008, 1019, 1035, 1119, 1188, 1473, 2307
DpnII	GATC	8 cut(s)	45, 1006, 1017, 1033, 1117, 1186, 1471, 2305
DraI	TTTAAA	1 cut(s)	930
DrdI	GACNNNNNNGTC	1 cut(s)	320
DseDI	GACNNNNNNGTC	1 cut(s)	320
Eam1104I	CTCTTC	2 cut(s)	249, 1057
EarI	CTCTTC	2 cut(s)	249, 1057
EciI	GGCGGA	1 cut(s)	2504
Eco130I	CCWWGG	2 cut(s)	120, 2420
Eco47I	GGWCC	3 cut(s)	1558, 1756, 2080
Eco57I	CTGAAG	2 cut(s)	273, 759
Eco88I	CYCGRG	1 cut(s)	609
EcoNI	CCTNNNNNAGG	1 cut(s)	124
EcoO109I	RGGNCCY	1 cut(s)	382
EcoRII	CCWGG	5 cut(s)	138, 737, 1199, 1741, 2454
EcoT14I	CCWWGG	2 cut(s)	120, 2420
EcoT22I	ATGCAT	2 cut(s)	357, 1685
ErhI	CCWWGG	2 cut(s)	120, 2420
FalI	AAGNNNNNCTT	2 cut(s)	1871, 1903
FaqI	GGGAC	4 cut(s)	156, 872, 1769, 2093
FauI	CCCGC	2 cut(s)	226, 2295
FauNDI	CATATG	1 cut(s)	409
FbaI	TGATCA	3 cut(s)	1006, 1117, 1186
FblI	GTMKAC	2 cut(s)	657, 907
Fnu4HI	GCNGC	5 cut(s)	780, 1280, 1283, 1845, 1876
FokI	GGATG	4 cut(s)	542, 677, 2215, 2270
Fsp4HI	GCNGC	5 cut(s)	780, 1280, 1283, 1845, 1876
FspBI	CTAG	2 cut(s)	1226, 1982
GlaI	GCGC	5 cut(s)	181, 222, 224, 1874, 2314
GluI	GCNGC	5 cut(s)	780, 1280, 1283, 1845, 1876
GsaI	CCCAGC	1 cut(s)	2400
HaeIII	GGCC	2 cut(s)	79, 383
HapII	CCGG	6 cut(s)	638, 1561, 2018, 2077, 2232, 2428
HgaI	GACGC	1 cut(s)	635
HhaI	GCGC	5 cut(s)	182, 223, 225, 1875, 2315
Hin1I	GRCGYC	1 cut(s)	646
Hin6I	GCGC	5 cut(s)	180, 221, 223, 1873, 2313
HinP1I	GCGC	5 cut(s)	180, 221, 223, 1873, 2313
HincII	GTYRAC	1 cut(s)	2034
HindII	GTYRAC	1 cut(s)	2034
HindIII	AAGCTT	1 cut(s)	723
HpaII	CCGG	6 cut(s)	638, 1561, 2018, 2077, 2232, 2428
HphI	GGTGA	4 cut(s)	575, 807, 1112, 1905
Hpy166II	GTNNAC	9 cut(s)	658, 808, 841, 908, 1455, 1599, 2013, 2034, 2107
Hpy188III	TCNNGA	8 cut(s)	882, 1046, 1226, 1561, 1642, 2018, 2181, 2285
Hpy8I	GTNNAC	9 cut(s)	658, 808, 841, 908, 1455, 1599, 2013, 2034, 2107
HpyCH4III	ACNGT	7 cut(s)	237, 317, 1492, 1978, 2038, 2248, 2495
HpyCH4IV	ACGT	3 cut(s)	770, 843, 2051
HpyF10VI	GCNNNNNNNGC	4 cut(s)	304, 722, 1872, 2443
HpyF3I	CTNAG	2 cut(s)	1791, 2294
HpySE526I	ACGT	3 cut(s)	770, 843, 2051
Hsp92I	GRCGYC	1 cut(s)	646
HspAI	GCGC	5 cut(s)	180, 221, 223, 1873, 2313
Kpn2I	TCCGGA	2 cut(s)	1560, 2017
KpnI	GGTACC	1 cut(s)	1240
Ksp22I	TGATCA	3 cut(s)	1006, 1117, 1186
Kzo9I	GATC	8 cut(s)	45, 1006, 1017, 1033, 1117, 1186, 1471, 2305
LmnI	GCTCC	1 cut(s)	1863
Lsp1109I	GCAGC	5 cut(s)	766, 1291, 1294, 1831, 1887
LweI	GCATC	3 cut(s)	156, 1831, 1992
MaeI	CTAG	2 cut(s)	1226, 1982
MaeII	ACGT	3 cut(s)	770, 843, 2051
MaeIII	GTNAC	5 cut(s)	61, 401, 563, 985, 2365
MalI	GATC	8 cut(s)	47, 1008, 1019, 1035, 1119, 1188, 1473, 2307
MbiI	CCGCTC	1 cut(s)	798
MboI	GATC	8 cut(s)	45, 1006, 1017, 1033, 1117, 1186, 1471, 2305
MflI	RGATCY	1 cut(s)	2305
MhlI	GDGCHC	1 cut(s)	2015
MluI	ACGCGT	1 cut(s)	370
MlyI	GAGTC	1 cut(s)	1361
MmeI	TCCRAC	2 cut(s)	629, 2198
Mph1103I	ATGCAT	2 cut(s)	357, 1685
MroI	TCCGGA	2 cut(s)	1560, 2017
MroXI	GAANNNNTTC	2 cut(s)	726, 1066
MseI	TTAA	6 cut(s)	191, 929, 1143, 1298, 1503, 2408
MslI	CAYNNNNRTG	3 cut(s)	410, 1215, 2142
MspA1I	CMGCKG	1 cut(s)	779
MspI	CCGG	6 cut(s)	638, 1561, 2018, 2077, 2232, 2428
MspR9I	CCNGG	7 cut(s)	140, 639, 739, 1201, 1743, 2078, 2456
MvaI	CCWGG	5 cut(s)	140, 739, 1201, 1743, 2456
MvnI	CGCG	5 cut(s)	180, 221, 223, 372, 2313
MwoI	GCNNNNNNNGC	4 cut(s)	304, 722, 1872, 2443
NciI	CCSGG	2 cut(s)	639, 2078
NdeI	CATATG	1 cut(s)	409
NdeII	GATC	8 cut(s)	45, 1006, 1017, 1033, 1117, 1186, 1471, 2305
NlaIV	GGNNCC	6 cut(s)	1238, 1757, 2081, 2307, 2417, 2426
NmuCI	GTSAC	5 cut(s)	61, 401, 563, 985, 2365
NsiI	ATGCAT	2 cut(s)	357, 1685
NspI	RCATGY	4 cut(s)	794, 1156, 1834, 1991
NspV	TTCGAA	2 cut(s)	1567, 2069
OliI	CACNNNNGTG	1 cut(s)	410
PauI	GCGCGC	1 cut(s)	221
PciI	ACATGT	4 cut(s)	790, 1152, 1830, 1987
PdmI	GAANNNNTTC	2 cut(s)	726, 1066
PflMI	CCANNNNNTGG	1 cut(s)	1808
PfoI	TCCNGGA	3 cut(s)	637, 1199, 2076
PkrI	GCNGC	5 cut(s)	781, 1281, 1284, 1846, 1877
PleI	GAGTC	1 cut(s)	1361
PpsI	GAGTC	1 cut(s)	1361
PscI	ACATGT	4 cut(s)	790, 1152, 1830, 1987
PsiI	TTATAA	2 cut(s)	1973, 2503
Psp6I	CCWGG	5 cut(s)	138, 737, 1199, 1741, 2454
PspFI	CCCAGC	1 cut(s)	2396
PspGI	CCWGG	5 cut(s)	138, 737, 1199, 1741, 2454
PspN4I	GGNNCC	6 cut(s)	1238, 1757, 2081, 2307, 2417, 2426
PspPI	GGNCC	4 cut(s)	382, 1558, 1756, 2080
PstI	CTGCAG	3 cut(s)	516, 1281, 1849
PstNI	CAGNNNCTG	1 cut(s)	1349
PsuI	RGATCY	1 cut(s)	2305
PteI	GCGCGC	1 cut(s)	221
PvuII	CAGCTG	1 cut(s)	779
RseI	CAYNNNNRTG	3 cut(s)	410, 1215, 2142
SaqAI	TTAA	6 cut(s)	191, 929, 1143, 1298, 1503, 2408
SatI	GCNGC	5 cut(s)	780, 1280, 1283, 1845, 1876
Sau3AI	GATC	8 cut(s)	45, 1006, 1017, 1033, 1117, 1186, 1471, 2305
Sau96I	GGNCC	4 cut(s)	382, 1558, 1756, 2080
SchI	GAGTC	1 cut(s)	1361
ScrFI	CCNGG	7 cut(s)	140, 639, 739, 1201, 1743, 2078, 2456
SduI	GDGCHC	1 cut(s)	2015
SfaNI	GCATC	3 cut(s)	156, 1831, 1992
SfcI	CTRYAG	5 cut(s)	512, 1277, 1845, 2382, 2467
SfuI	TTCGAA	2 cut(s)	1567, 2069
SinI	GGWCC	3 cut(s)	1558, 1756, 2080
SmiMI	CAYNNNNRTG	3 cut(s)	410, 1215, 2142
SmlI	CTYRAG	2 cut(s)	711, 2218
SmoI	CTYRAG	2 cut(s)	711, 2218
SsiI	CCGC	9 cut(s)	54, 219, 796, 1098, 2083, 2135, 2215, 2302, 2489
SspMI	CTAG	2 cut(s)	1226, 1982
StyD4I	CCNGG	7 cut(s)	138, 637, 737, 1199, 1741, 2076, 2454
StyI	CCWWGG	2 cut(s)	120, 2420
TaaI	ACNGT	7 cut(s)	237, 317, 1492, 1978, 2038, 2248, 2495
TaiI	ACGT	3 cut(s)	773, 846, 2054
TaqI	TCGA	7 cut(s)	345, 387, 883, 1411, 1567, 1581, 2069
TaqII	GACCGA	1 cut(s)	905
TatI	WGTACW	3 cut(s)	1596, 1833, 1984
Tru1I	TTAA	6 cut(s)	191, 929, 1143, 1298, 1503, 2408
Tru9I	TTAA	6 cut(s)	191, 929, 1143, 1298, 1503, 2408
TscAI	CASTG	6 cut(s)	636, 929, 994, 1142, 1497, 1983
TseFI	GTSAC	5 cut(s)	61, 401, 563, 985, 2365
TseI	GCWGC	5 cut(s)	779, 1279, 1282, 1844, 1875
Tsp45I	GTSAC	5 cut(s)	61, 401, 563, 985, 2365
TspDTI	ATGAA	8 cut(s)	612, 735, 1352, 1668, 1844, 1909, 2169, 2317
TspGWI	ACGGA	3 cut(s)	1075, 1602, 1612
TspRI	CASTG	6 cut(s)	636, 929, 994, 1142, 1497, 1983
Van91I	CCANNNNNTGG	1 cut(s)	1808
VneI	GTGCAC	1 cut(s)	2011
VpaK11BI	GGWCC	3 cut(s)	1558, 1756, 2080
XagI	CCTNNNNNAGG	1 cut(s)	124
XapI	RAATTY	2 cut(s)	451, 2159
XbaI	TCTAGA	1 cut(s)	1225
XceI	RCATGY	4 cut(s)	794, 1156, 1834, 1991
XmiI	GTMKAC	2 cut(s)	657, 907
XmnI	GAANNNNTTC	2 cut(s)	726, 1066
XspI	CTAG	2 cut(s)	1226, 1982
Zsp2I	ATGCAT	2 cut(s)	357, 1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.