Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Reverse (-)

46878533 .. 46881575

Gene Structure 3043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G022130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

ATGAGTAACCTCAAGTTAGGGGTGGAGGTCGTGGCTGCACATGACCTCATGCCCAAAGATGGACAGGGCTCAGCTAGTGCCTTTGTGGAGCTTCACTTTGATCATCAGAGATTCCGAACCAGTGTAAAAGAAAGAGATCTCAATCCTGTCTGGAATGAAAGCTTTTACTTCAACGTTACTGATCCAAATGACCTCTCTAACCTAAGTCTCGAAGCCTTTGTTTACAACCATGGTAAAGCCAACTCCAAATTATTCCTGGGGAAGGTTTGTCTTACTGGGACCTCATTTGTCCCATACTCTGATGCTTGTGTTTTGCACTATCCTTTGGAAAAGAGAGGTATTTTCTCACGTGTGAAGGGAGAGCTTGGCCTCAAAGTTTTTGTTACTGATGACCCGTCTATCAGATCCTCAAATCCACTTCCAGCAATGGACTCTTCGATGGATAGAGGTTCACGCCACACACATGCTGATTCGAGACACACATTTCGTCACCTTCCAAATCCTACCATAGCACAACAGCAGAATATTCCTTCAGCGGCTACCCAGCCATCAGTGAACTATGGGATGCAGGAGATGAGGTCTGAACCACAGGGACCTCAAACTGTTCGCATGTACTCAGGTTCATCATCTCAACCTTCTGATTATATGCTTAAAGAGACGAGTCCTTTCCTTGGAGGGGGCCAAATTGTTGGTGGGCGGGTTATGCGTACCAACAGACCATCCAGCACCTATGACCTTGTTGAAAAGATGCAATACCTCTTTGTACGAGTTGTGAAAGCTCGCGATCTTCCTATGATGGATGTTACTGGAAGCCTTGATCCATATGTTGAAGTAAGAATAGGGAACTACAAAGGAGTTACAAAGCATTTTGAGAAGCAGAAGAACCCTGAATGGAATGAGGTGTTTGCCTTTGCAAAGGAAAATGAGCAAGCACATGTATTGGAGGTTGTGGTCAAAGACAAGGATCTTATGAAAGATGATTATGTTGGGTTTGTGCGGTTTGATCTCCATGAAGTTCCTACACGAGTTCCACCTGATAGTCCATTGGCTCCAGAATGGTATCGGATAGAAAACAAGAAAGGGGAGAAGAGGAATGGGGAACTGATGCTTGCTGTATGGTATGGCACACAAGCTGATGAGGCTTTTCCAGATGCATGGCATTCTGATGCAATTGGTCCTGATGATACTTCTTCGGCTACTTTTGCACATTCGCGCTCAAAAGTTTACCATTCACCACGATTATGGTATGTACGAGTAAATGTAATTGAGGCACAGGACTTGATTATATCTGACAGGTCTCGGTTCCCAGATGCATATGCAAAAGTACAAATTGGTAATCAGGTCCTAAAGACGAAAACAGTTCAAACTCGAATTCTGAACCCAATGTGGAATGAGGACCTGATGTTTGTTGCTGCTGAACCCTTTGATGACCATCTGATCATTTCAGTTGAAGATCGTGTTGGTTCAAACAAAGATGAGACCTTAGGAAGGGTTGTCATACCATTGAACACTGTTGAGAGGCGTGCTGATGATCGAAATATTCGTGGGCGGTGGTATAACCTTGAAAAGCACATGTCAGATGCCATGGAGCTGGAGGGAGAGCAGCGGAAGAAAGATAAAGAAAGAGATAGGTTTTCCAGCAGGATCCATCTTCGTATTTGTCTTGATGGAGGGTATCATTCTAAGCCAAAGTACAATGAGCAGTACACTTGGGAGGTATTTGATCCTGCAACCGTTCTCACAGTGGGGGTTTTCGATAACTCTCAGATTTTTGGTAATTCAAATGGCAACAGAGATGTGAAAATTGGCAAGGTCAGGATTCGTATGTCTACCCTTGAGACTGGTCGCGTCTACACACACACTTACCCATTACTAGTCCTTCATCCTTCAGGTGTCAAGAAGATGGGTGAATTGCATCTTGCAATAAGATTTTCATGCACATCACTGGTTAACATGATGTTCAAATACTCTAGACCTCTTTTGCCGAAGATGCATTATGTAAGGCCGTTGACTGTGATGCAGCAAGACATGCTACGTCACCAAGCTGTCAACATAGTTGCAGCCCGGCTTAGTCGGGCGGAACCACCTCTTAGGAAGGAAGTGGTGGAATACATGTCTGATGCAGATTCTCATCTTTGGAGCATGAGGCGTAGCAAGGCAAACTTTTTCAGACTGATGACTGTATTTTCGGGATTGTTTGCTGTTGGAAAATGGTTTGGAGAAGTATGCATGTGGAAAAACCCCATCACAACAGCACTTGTACATGTTCTCTTTGTGATGCTTGTGTGCTTTCCTGAACTGATTTTGCCGACTGTTTTCCTGTACATGTTTCTGATTGGGATTTGGAATTTCCGATATCGCCCAAGGTACCCTCCTCACATGAACACAAGGATCTCATATGCAGATGCCGTGCACCCAGATGAGCTTGATGAAGAATTCGACACATTTCCAACATCTAAGGGTTCAGATATAGTTCGGATGAGGTATGATCGCTTAAGGAGTGTTGCTGGAAGGATTCAAACGGTGGTGGGTGATGTTGCAACTCAAGGGGAGCGAATGCAGGCGCTTCTCAGCTGGCGGGATCCTCGTGCCACTATGTTATTTATCACATTCTGTCTTGTGGCTGCTATTGTGTTATACGTAACACCTTTCCAGGTTTTGGTTCTTCTCGGTGGGGTTTACTTCATGAGGCACCCCAGGTTCAGGCATAAGATGCCATCAGCCCCAGTTAACTTTTTCCGAAGGCTGCCAGCGAGGACAGATAGTATGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

924

Amino Acids

106.06

Weight (kDa)

9.06

Isoelectric Point (pI)

42.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	5 - 93	1.6e-18	C2 domain
C2	PF00168	252 - 353	4.9e-21	C2 domain
C2	PF00168	416 - 521	3.8e-22	C2 domain
C2	PF00168	562 - 624	1.3e-07	C2 domain
PRT_C	PF08372	769 - 924	4.1e-82	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2367
AccB1I	GGYRCC	2 cut(s)	2367, 2691
AccB7I	CCANNNNNTGG	1 cut(s)	2659
AccI	GTMKAC	2 cut(s)	1829, 1851
AccII	CGCG	3 cut(s)	783, 1213, 1848
AciI	CCGC	7 cut(s)	536, 697, 997, 1549, 1606, 2078, 2578
AclI	AACGTT	1 cut(s)	174
AcsI	RAATTY	3 cut(s)	1371, 2347, 2435
AcuI	CTGAAG	2 cut(s)	516, 1872
AcvI	CACGTG	1 cut(s)	350
AfiI	CCNNNNNNNGG	7 cut(s)	59, 262, 671, 676, 1488, 2659, 2703
AflII	CTTAAG	1 cut(s)	2494
AflIII	ACRYGT	6 cut(s)	349, 934, 1572, 2112, 2263, 2325
AhlI	ACTAGT	1 cut(s)	1873
AjnI	CCWGG	3 cut(s)	255, 2652, 2696
AjuI	GAANNNNNNNTTGG	2 cut(s)	1443, 1475
Alw21I	GWGCWC	1 cut(s)	2415
Alw26I	GTCTC	6 cut(s)	212, 469, 650, 1302, 1472, 1832
Alw44I	GTGCAC	1 cut(s)	2411
AoxI	GGCC	3 cut(s)	367, 679, 2003
ApaLI	GTGCAC	1 cut(s)	2411
ApeKI	GCWGC	7 cut(s)	35, 1412, 1603, 2020, 2060, 2624, 2746
ApoI	RAATTY	3 cut(s)	1371, 2347, 2435
ArsI	GACNNNNNNTTYG	6 cut(s)	468, 500, 1388, 1420, 2170, 2202
Asp718I	GGTACC	1 cut(s)	2367
AspLEI	GCGC	2 cut(s)	1215, 2566
AspS9I	GGNCC	6 cut(s)	279, 593, 679, 1175, 1342, 1396
AsuC2I	CCSGG	1 cut(s)	2065
AsuHPI	GGTGA	5 cut(s)	482, 1224, 1919, 2030, 2543
AvaII	GGWCC	5 cut(s)	279, 593, 1175, 1342, 1396
AxyI	CCTNAGG	1 cut(s)	1483
BaeGI	GKGCMC	1 cut(s)	2415
BamHI	GGATCC	2 cut(s)	1644, 2581
BanI	GGYRCC	2 cut(s)	2367, 2691
BanII	GRGCYC	1 cut(s)	71
BauI	CACGAG	2 cut(s)	1023, 2586
BbrPI	CACGTG	1 cut(s)	350
Bbv12I	GWGCWC	1 cut(s)	2415
BbvI	GCAGC	7 cut(s)	22, 1399, 1615, 2032, 2072, 2611, 2733
BceAI	ACGGC	2 cut(s)	1990, 2393
BciT130I	CCWGG	3 cut(s)	257, 2654, 2698
BclI	TGATCA	2 cut(s)	100, 1437
BcnI	CCSGG	1 cut(s)	2065
BcoDI	GTCTC	6 cut(s)	212, 469, 650, 1302, 1472, 1832
BcuI	ACTAGT	1 cut(s)	1873
BfaI	CTAG	3 cut(s)	75, 1874, 1971
BfoI	RGCGCY	1 cut(s)	2567
BfrI	CTTAAG	1 cut(s)	2494
BglII	AGATCT	1 cut(s)	136
BisI	GCNGC	8 cut(s)	36, 537, 1413, 1604, 2021, 2061, 2625, 2747
BlpI	GCTNAGC	1 cut(s)	70
BlsI	GCNGC	8 cut(s)	37, 538, 1414, 1605, 2022, 2062, 2626, 2748
Bme1390I	CCNGG	4 cut(s)	257, 2065, 2654, 2698
Bme18I	GGWCC	5 cut(s)	279, 593, 1175, 1342, 1396
BmgT120I	GGNCC	6 cut(s)	279, 593, 679, 1175, 1342, 1396
BmrFI	CCNGG	4 cut(s)	257, 2065, 2654, 2698
BmrI	ACTGGG	2 cut(s)	285, 2720
BmuI	ACTGGG	2 cut(s)	285, 2720
BpmI	CTGGAG	2 cut(s)	1035, 1613
Bpu1102I	GCTNAGC	1 cut(s)	70
BpuEI	CTTGAG	2 cut(s)	1856, 2529
BpuMI	CCSGG	1 cut(s)	2065
BsaAI	YACGTR	2 cut(s)	350, 2641
BsaBI	GATNNNNATC	3 cut(s)	141, 1431, 2130
BsaI	GGTCTC	2 cut(s)	1302, 1472
BsaJI	CCNNGG	6 cut(s)	229, 256, 670, 1584, 2363, 2696
BsaXI	ACNNNNNCTCC	2 cut(s)	563, 593
Bsc4I	CCNNNNNNNGG	7 cut(s)	59, 262, 671, 676, 1488, 2659, 2703
Bse1I	ACTGG	6 cut(s)	120, 280, 811, 1846, 1950, 2726
Bse21I	CCTNAGG	1 cut(s)	1483
Bse3DI	GCAATG	1 cut(s)	432
Bse8I	GATNNNNATC	3 cut(s)	141, 1431, 2130
BseBI	CCWGG	3 cut(s)	257, 2654, 2698
BseDI	CCNNGG	6 cut(s)	229, 256, 670, 1584, 2363, 2696
BseGI	GGATG	5 cut(s)	570, 719, 805, 1882, 2484
BseJI	GATNNNNATC	3 cut(s)	141, 1431, 2130
BseLI	CCNNNNNNNGG	7 cut(s)	59, 262, 671, 676, 1488, 2659, 2703
BseMI	GCAATG	1 cut(s)	432
BseMII	CTCAG	4 cut(s)	84, 630, 1778, 2584
BseNI	ACTGG	6 cut(s)	120, 280, 811, 1846, 1950, 2726
BseRI	GAGGAG	1 cut(s)	2364
BseSI	GKGCMC	1 cut(s)	2415
BseXI	GCAGC	7 cut(s)	22, 1399, 1615, 2032, 2072, 2611, 2733
BseYI	CCCAGC	1 cut(s)	543
BsgI	GTGCAG	1 cut(s)	21
Bsh1236I	CGCG	3 cut(s)	783, 1213, 1848
BshFI	GGCC	3 cut(s)	369, 681, 2005
BshNI	GGYRCC	2 cut(s)	2367, 2691
BsiHKAI	GWGCWC	1 cut(s)	2415
BsiSI	CCGG	1 cut(s)	2065
BslFI	GGGAC	3 cut(s)	275, 292, 606
BslI	CCNNNNNNNGG	7 cut(s)	59, 262, 671, 676, 1488, 2659, 2703
BsmAI	GTCTC	6 cut(s)	212, 469, 650, 1302, 1472, 1832
BsmBI	CGTCTC	1 cut(s)	650
BsmFI	GGGAC	3 cut(s)	275, 292, 606
BsmI	GAATGC	2 cut(s)	1159, 2562
BsnI	GGCC	3 cut(s)	369, 681, 2005
Bso31I	GGTCTC	2 cut(s)	1302, 1472
Bsp1286I	GDGCHC	2 cut(s)	71, 2415
Bsp1407I	TGTACA	2 cut(s)	2260, 2322
Bsp1720I	GCTNAGC	1 cut(s)	70
Bsp19I	CCATGG	2 cut(s)	229, 1584
Bsp68I	TCGCGA	1 cut(s)	783
BspACI	CCGC	7 cut(s)	536, 697, 997, 1549, 1606, 2078, 2578
BspANI	GGCC	3 cut(s)	369, 681, 2005
BspCNI	CTCAG	4 cut(s)	83, 629, 1777, 2583
BspFNI	CGCG	3 cut(s)	783, 1213, 1848
BspHI	TCATGA	1 cut(s)	2685
BspT107I	GGYRCC	2 cut(s)	2367, 2691
BspTI	CTTAAG	1 cut(s)	2494
BspTNI	GGTCTC	2 cut(s)	1302, 1472
BsrDI	GCAATG	1 cut(s)	432
BsrGI	TGTACA	2 cut(s)	2260, 2322
BsrI	ACTGG	6 cut(s)	120, 280, 811, 1846, 1950, 2726
BssECI	CCNNGG	6 cut(s)	229, 256, 670, 1584, 2363, 2696
BssSI	CACGAG	2 cut(s)	1023, 2586
BssT1I	CCWWGG	4 cut(s)	229, 670, 1584, 2363
Bst2BI	CACGAG	2 cut(s)	1023, 2586
Bst2UI	CCWGG	3 cut(s)	257, 2654, 2698
Bst4CI	ACNGT	9 cut(s)	604, 1360, 1513, 1735, 1744, 2014, 2182, 2314, 2524
Bst6I	CTCTTC	2 cut(s)	439, 1082
BstAFI	CTTAAG	1 cut(s)	2494
BstAPI	GCANNNNNTGC	2 cut(s)	2029, 2713
BstAUI	TGTACA	2 cut(s)	2260, 2322
BstBAI	YACGTR	2 cut(s)	350, 2641
BstC8I	GCNNGC	7 cut(s)	781, 930, 1110, 1524, 2562, 2576, 2751
BstDSI	CCRYGG	2 cut(s)	229, 1584
BstENI	CCTNNNNNAGG	2 cut(s)	260, 1486
BstF5I	GGATG	5 cut(s)	570, 719, 805, 1882, 2484
BstFNI	CGCG	3 cut(s)	783, 1213, 1848
BstH2I	RGCGCY	1 cut(s)	2567
BstHHI	GCGC	2 cut(s)	1215, 2566
BstMAI	GTCTC	6 cut(s)	212, 469, 650, 1302, 1472, 1832
BstMWI	GCNNNNNNNGC	6 cut(s)	703, 1139, 1202, 1990, 2029, 2713
BstNI	CCWGG	3 cut(s)	257, 2654, 2698
BstNSI	RCATGY	9 cut(s)	467, 613, 938, 1576, 2032, 2116, 2233, 2267, 2329
BstSCI	CCNGG	4 cut(s)	255, 2063, 2652, 2696
BstSLI	GKGCMC	1 cut(s)	2415
BstSNI	TACGTA	1 cut(s)	2641
BstUI	CGCG	3 cut(s)	783, 1213, 1848
BstV1I	GCAGC	7 cut(s)	22, 1399, 1615, 2032, 2072, 2611, 2733
BstX2I	RGATCY	6 cut(s)	136, 404, 964, 1644, 2391, 2581
BstXI	CCANNNNNNTGG	4 cut(s)	689, 1155, 1242, 1591
BstYI	RGATCY	6 cut(s)	136, 404, 964, 1644, 2391, 2581
Bsu36I	CCTNAGG	1 cut(s)	1483
BsuRI	GGCC	3 cut(s)	369, 681, 2005
BtgI	CCRYGG	2 cut(s)	229, 1584
BtsCI	GGATG	5 cut(s)	570, 719, 805, 1882, 2484
BtsIMutI	CAGTG	5 cut(s)	127, 558, 1509, 1749, 1943
BtuMI	TCGCGA	1 cut(s)	783
Cac8I	GCNNGC	7 cut(s)	781, 930, 1110, 1524, 2562, 2576, 2751
CciI	TCATGA	1 cut(s)	2685
CfoI	GCGC	2 cut(s)	1215, 2566
Cfr13I	GGNCC	6 cut(s)	279, 593, 679, 1175, 1342, 1396
CseI	GACGC	1 cut(s)	1837
Eam1104I	CTCTTC	2 cut(s)	439, 1082
EarI	CTCTTC	2 cut(s)	439, 1082
EciI	GGCGGA	1 cut(s)	2093
Eco105I	TACGTA	1 cut(s)	2641
Eco130I	CCWWGG	4 cut(s)	229, 670, 1584, 2363
Eco24I	GRGCYC	1 cut(s)	71
Eco31I	GGTCTC	2 cut(s)	1302, 1472
Eco32I	GATATC	1 cut(s)	2357
Eco47I	GGWCC	5 cut(s)	279, 593, 1175, 1342, 1396
Eco57I	CTGAAG	2 cut(s)	516, 1872
Eco72I	CACGTG	1 cut(s)	350
Eco81I	CCTNAGG	1 cut(s)	1483
EcoNI	CCTNNNNNAGG	2 cut(s)	260, 1486
EcoO109I	RGGNCCY	4 cut(s)	279, 593, 1342, 1396
EcoRI	GAATTC	2 cut(s)	1371, 2435
EcoRII	CCWGG	3 cut(s)	255, 2652, 2696
EcoRV	GATATC	1 cut(s)	2357
EcoT14I	CCWWGG	4 cut(s)	229, 670, 1584, 2363
EcoT22I	ATGCAT	4 cut(s)	1156, 1315, 1995, 2231
EcoT38I	GRGCYC	1 cut(s)	71
ErhI	CCWWGG	4 cut(s)	229, 670, 1584, 2363
Esp3I	CGTCTC	1 cut(s)	650
FalI	AAGNNNNNCTT	2 cut(s)	2147, 2179
FaqI	GGGAC	3 cut(s)	275, 292, 606
FauI	CCCGC	2 cut(s)	690, 2571
FauNDI	CATATG	3 cut(s)	823, 1315, 2398
FbaI	TGATCA	2 cut(s)	100, 1437
FblI	GTMKAC	2 cut(s)	1829, 1851
Fnu4HI	GCNGC	8 cut(s)	36, 537, 1413, 1604, 2021, 2061, 2625, 2747
FokI	GGATG	5 cut(s)	577, 706, 812, 1869, 2491
FriOI	GRGCYC	1 cut(s)	71
Fsp4HI	GCNGC	8 cut(s)	36, 537, 1413, 1604, 2021, 2061, 2625, 2747
FspBI	CTAG	3 cut(s)	75, 1874, 1971
GlaI	GCGC	2 cut(s)	1214, 2565
GluI	GCNGC	8 cut(s)	36, 537, 1413, 1604, 2021, 2061, 2625, 2747
GsaI	CCCAGC	1 cut(s)	547
GsuI	CTGGAG	2 cut(s)	1035, 1613
HaeII	RGCGCY	1 cut(s)	2567
HaeIII	GGCC	3 cut(s)	369, 681, 2005
HapII	CCGG	1 cut(s)	2065
HgaI	GACGC	1 cut(s)	1837
HhaI	GCGC	2 cut(s)	1215, 2566
Hin6I	GCGC	2 cut(s)	1213, 2564
HinP1I	GCGC	2 cut(s)	1213, 2564
HincII	GTYRAC	4 cut(s)	1951, 2010, 2050, 2731
HindII	GTYRAC	4 cut(s)	1951, 2010, 2050, 2731
HindIII	AAGCTT	1 cut(s)	160
HinfI	GANTC	7 cut(s)	111, 431, 470, 661, 1819, 2126, 2515
HpaI	GTTAAC	2 cut(s)	1951, 2731
HpaII	CCGG	1 cut(s)	2065
HphI	GGTGA	5 cut(s)	482, 1224, 1919, 2030, 2543
HpyCH4III	ACNGT	9 cut(s)	604, 1360, 1513, 1735, 1744, 2014, 2182, 2314, 2524
HpyCH4IV	ACGT	4 cut(s)	174, 349, 2035, 2640
HpyF10VI	GCNNNNNNNGC	6 cut(s)	703, 1139, 1202, 1990, 2029, 2713
HpySE526I	ACGT	4 cut(s)	174, 349, 2035, 2640
HspAI	GCGC	2 cut(s)	1213, 2564
KpnI	GGTACC	1 cut(s)	2371
Ksp22I	TGATCA	2 cut(s)	100, 1437
KspAI	GTTAAC	2 cut(s)	1951, 2731
LmnI	GCTCC	5 cut(s)	88, 1054, 1588, 2139, 2551
Lsp1109I	GCAGC	7 cut(s)	22, 1399, 1615, 2032, 2072, 2611, 2733
MaeI	CTAG	3 cut(s)	75, 1874, 1971
MaeII	ACGT	4 cut(s)	174, 349, 2035, 2640
MaeIII	GTNAC	8 cut(s)	5, 175, 382, 488, 802, 856, 2036, 2641
MfeI	CAATTG	1 cut(s)	1170
MflI	RGATCY	6 cut(s)	136, 404, 964, 1644, 2391, 2581
MhlI	GDGCHC	2 cut(s)	71, 2415
MlyI	GAGTC	2 cut(s)	425, 670
MmeI	TCCRAC	2 cut(s)	2185, 2474
Mph1103I	ATGCAT	4 cut(s)	1156, 1315, 1995, 2231
MseI	TTAA	4 cut(s)	651, 1950, 2495, 2730
MslI	CAYNNNNRTG	4 cut(s)	462, 1164, 1240, 2418
MspA1I	CMGCKG	3 cut(s)	536, 1606, 2574
MspCI	CTTAAG	1 cut(s)	2494
MspI	CCGG	1 cut(s)	2065
MspR9I	CCNGG	4 cut(s)	257, 2065, 2654, 2698
MunI	CAATTG	1 cut(s)	1170
Mva1269I	GAATGC	2 cut(s)	1159, 2562
MvaI	CCWGG	3 cut(s)	257, 2654, 2698
MvnI	CGCG	3 cut(s)	783, 1213, 1848
MwoI	GCNNNNNNNGC	6 cut(s)	703, 1139, 1202, 1990, 2029, 2713
NciI	CCSGG	1 cut(s)	2065
NcoI	CCATGG	2 cut(s)	229, 1584
NdeI	CATATG	3 cut(s)	823, 1315, 2398
NmuCI	GTSAC	2 cut(s)	488, 2036
NruI	TCGCGA	1 cut(s)	783
NsiI	ATGCAT	4 cut(s)	1156, 1315, 1995, 2231
NspI	RCATGY	9 cut(s)	467, 613, 938, 1576, 2032, 2116, 2233, 2267, 2329
PagI	TCATGA	1 cut(s)	2685
PciI	ACATGT	5 cut(s)	934, 1572, 2112, 2263, 2325
PcsI	WCGNNNNNNNCGW	1 cut(s)	1540
PctI	GAATGC	2 cut(s)	1159, 2562
PfeI	GAWTC	5 cut(s)	111, 470, 1819, 2126, 2515
PflMI	CCANNNNNTGG	1 cut(s)	2659
PkrI	GCNGC	8 cut(s)	37, 538, 1414, 1605, 2022, 2062, 2626, 2748
PleI	GAGTC	2 cut(s)	425, 669
PmaCI	CACGTG	1 cut(s)	350
PmlI	CACGTG	1 cut(s)	350
PpsI	GAGTC	2 cut(s)	425, 669
Ppu21I	YACGTR	2 cut(s)	350, 2641
PpuMI	RGGWCCY	4 cut(s)	279, 593, 1342, 1396
PscI	ACATGT	5 cut(s)	934, 1572, 2112, 2263, 2325
Psp1406I	AACGTT	1 cut(s)	174
Psp5II	RGGWCCY	4 cut(s)	279, 593, 1342, 1396
Psp6I	CCWGG	3 cut(s)	255, 2652, 2696
PspCI	CACGTG	1 cut(s)	350
PspFI	CCCAGC	1 cut(s)	543
PspGI	CCWGG	3 cut(s)	255, 2652, 2696
PspPI	GGNCC	6 cut(s)	279, 593, 679, 1175, 1342, 1396
PspPPI	RGGWCCY	4 cut(s)	279, 593, 1342, 1396
PsuI	RGATCY	6 cut(s)	136, 404, 964, 1644, 2391, 2581
PvuII	CAGCTG	1 cut(s)	2574
RruI	TCGCGA	1 cut(s)	783
RseI	CAYNNNNRTG	4 cut(s)	462, 1164, 1240, 2418
SaqAI	TTAA	4 cut(s)	651, 1950, 2495, 2730
SatI	GCNGC	8 cut(s)	36, 537, 1413, 1604, 2021, 2061, 2625, 2747
Sau96I	GGNCC	6 cut(s)	279, 593, 679, 1175, 1342, 1396
SchI	GAGTC	2 cut(s)	425, 670
ScrFI	CCNGG	4 cut(s)	257, 2065, 2654, 2698
SduI	GDGCHC	2 cut(s)	71, 2415
SinI	GGWCC	5 cut(s)	279, 593, 1175, 1342, 1396
SmiMI	CAYNNNNRTG	4 cut(s)	462, 1164, 1240, 2418
SmlI	CTYRAG	4 cut(s)	11, 1835, 2494, 2544
SmoI	CTYRAG	4 cut(s)	11, 1835, 2494, 2544
SnaBI	TACGTA	1 cut(s)	2641
SpeI	ACTAGT	1 cut(s)	1873
SsiI	CCGC	7 cut(s)	536, 697, 997, 1549, 1606, 2078, 2578
SspI	AATATT	2 cut(s)	526, 1540
SspMI	CTAG	3 cut(s)	75, 1874, 1971
StyD4I	CCNGG	4 cut(s)	255, 2063, 2652, 2696
StyI	CCWWGG	4 cut(s)	229, 670, 1584, 2363
TaaI	ACNGT	9 cut(s)	604, 1360, 1513, 1735, 1744, 2014, 2182, 2314, 2524
TaiI	ACGT	4 cut(s)	177, 352, 2038, 2643
TaqI	TCGA	7 cut(s)	210, 437, 473, 1369, 1534, 1755, 2439
TatI	WGTACW	6 cut(s)	612, 1324, 1692, 1704, 2260, 2322
TauI	GCSGC	1 cut(s)	539
TfiI	GAWTC	5 cut(s)	111, 470, 1819, 2126, 2515
Tru1I	TTAA	4 cut(s)	651, 1950, 2495, 2730
Tru9I	TTAA	4 cut(s)	651, 1950, 2495, 2730
TscAI	CASTG	5 cut(s)	127, 558, 1516, 1749, 1950
TseFI	GTSAC	2 cut(s)	488, 2036
TseI	GCWGC	7 cut(s)	35, 1412, 1603, 2020, 2060, 2624, 2746
Tsp45I	GTSAC	2 cut(s)	488, 2036
TspDTI	ATGAA	9 cut(s)	171, 612, 986, 1026, 1871, 1923, 2396, 2445, 2674
TspRI	CASTG	5 cut(s)	127, 558, 1516, 1749, 1950
Van91I	CCANNNNNTGG	1 cut(s)	2659
Vha464I	CTTAAG	1 cut(s)	2494
VneI	GTGCAC	1 cut(s)	2411
VpaK11BI	GGWCC	5 cut(s)	279, 593, 1175, 1342, 1396
XagI	CCTNNNNNAGG	2 cut(s)	260, 1486
XapI	RAATTY	3 cut(s)	1371, 2347, 2435
XbaI	TCTAGA	1 cut(s)	1970
XceI	RCATGY	9 cut(s)	467, 613, 938, 1576, 2032, 2116, 2233, 2267, 2329
XcmI	CCANNNNNNNNNTGG	2 cut(s)	253, 689
XmiI	GTMKAC	2 cut(s)	1829, 1851
XspI	CTAG	3 cut(s)	75, 1874, 1971
Zsp2I	ATGCAT	4 cut(s)	1156, 1315, 1995, 2231

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.