Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Reverse (-)

1860329 .. 1863094

Gene Structure 2766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1025600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGAGTAACCTCAAGTTAGCGGTGGAGGTTGTGAGTGCCCATAACCTTATGCTGAGACATGGACAAAGCACAACCAGTGCTTATGTGGAGTTCCTGTTCGATCGTCAGAGAGCCCGAACCAGCACAAAAGCAAGAGATGTCAATCATGTTTGGAATGAAACCATCTTCTTTGATGTCTCCGATCCAAACCGCCTGCGTGACCTCGTTGTTGAGGCCAATGTTTTCCACAATGGAAATGCCAACTCTACAACTTTCCTTGGAAAGGTTTGTCTGCCTGGGACATCATTTGTCCCATACTCTGATGCTCATGTTTCGCTCTACTCTCTTAAAAAAAGAGGTGTTTTCTCTTTCTCCCGCGTGAGAGGAGAGCTTGCTCTGAAGGCTTACCTTGCAAACCCAAATCAATCGCAGCCATCGGTGAACCATGAGGCGAAGTCCGAATCCCATGAGCCTCCTAAAGTTGCTCCGAAGAACTCAGGTTCTTCATCTCGACCGTCTGATTATCTGCTTAAAGAGTCAAGTCCTTACTTGGGAGGGGGGCAGGTTGTTCGTGGGCGATTTGTGCGTGGAGACAGTCCAGTCATCAGCACCCATGAGCTTGTCGAAACAATGCATTACCTGTTTGTACGCGTTGTGAAGGCCCTCGACCTTTCTTGTCGTGACGCATATGTGGAAGTGAAAGTTGGGAACTGCAAAGGAATTACAAGAAGTTTGGAGAAAAAGCAGAACCCTGAATGGAATGAGTTTGCTCTCGATGAAGTTCAGACTCGAGTTCCAGTGGCTCCGGAAAGGCATCAGCTAGTAGACAAGGATGGGAAGAAGAAGAAGAAAGGGGAACTAATGCTTGCTGTATGGTATGGCACTCAAGCTGATGAAGCTTTTCCAAATGCCTGGTATTCTGATATAATTCTTCCTGATGATATGTCTTCAGCTGCTTATACACATGTCCGCTCAAAAGTTTACGATTCACCAAGATTATGGTACGTACGGGTAAAGGTGATTGAGGCACGGGACTTGGTTGTACCTGACACATCTCGAATCCCAGATGCATACGCAAGTATACAAATCGGTCATCAGTGTTTAAAGACAAGAGAAGTTCAATCTCTGAACCCAATGTGGAATGAGGAACTTATGTTTGTCACTGCCGAACCCTTTGATGATCAACATCTGATCGTTTCTGTTGAAGATCATGTATGTCCAGACAAAGAGGAGACATTAGGAAGAGTTTCCATAGCATTGAACTCCGTTAAGAGGTGCGGTGAATCTGCTGATGATGATCAAATTATCTGTGGGCAGTGGTTTAACCTTGACATGTCTCTGTCAAATGCCATGGAGAAAGATAGAGATCATAAGTTTTCCAGGAGAATCCATCTCCATGTTTGTCTAGATGGAGGGTACCATTTACTTGATGATTCTTCTAACTATTGCAACGACCTGCAGCGGCCTGTTGGTGTCTTAGAGCTCGGAGTTCTAAATGCCAAAGACCTAATGCCAATGAAAACAGAGACTGGGAAGGCTACAACTGACTCGTATTGTGTGGCGAAGTTTGGCGACAAATGGGTTCGTACTCGAACCATAACTAACAGCCCAAGTCCAAAATACAGTGAGCAGTACACTTGGGAGGTATATGATCCTGTCTCAATTCTCACAGTCGGGGTTTTTGATAACAGGCAGATTGGCAATTCAAGTGGAAAAAAAGATAAAGAAATTGGCAAGGTCCGGATTCGAATCTCTACCCTCGAATCAGACCGCGTGTACACACACTGTTATCCATTACTATCCCTTTCTCCTTCTGGTGTCAAGAAGACGGGCGAATTACATCTTGCAATAAGGTTTTCATGCATATCATTGGCCAATCTGATGTTGATTTACTTTCAACCCGTTTCGGTAAAGGTGCAGCCAGGCACATTGAGGGATCAAGCTGTGTTGGTGGTGGCAGATAGGCTTGCTCAGGTAGAACCACCTCTTGGGAAGGAAGTAGTTGAATACATGTACTCTGATGCTGCAGATGTTCATGTTTGGAGCCTGAGGCGCAGCAAGGCAAACTTTTTCAGAATGATGGGTGTTTTATCCTGGTTCATTTCTGTTCTGAAATGGTTTGATGAAGTATGGATTTCGAACTTGCGGTACCGCCCAAGACACCCTCTCCATGTGGACACAAGGCTCTCACATGCAGACGCTGCGCACCCTGATGAGCTTGATGAAGAATTTGACACATTTCCAACTTCACAAAACGATGAAATAATGAAGATGAGGTACGACCGCTTGAGGAGTATTGCCGGAAGGATTCAAACTGTGGTGGGGGATGTTGCAACGATGGGGGAGCGGATTCAGGAATTTCTCATCAGTTGGCGGGATCCTCGCGCCACTTTTATATTCATCACATTCTGTCTTTTTGTTGCCATTTTGTTGTTTGTGACACCGTTGAAGGTTGTAGTTATTGTTGGTGGGTTTTACTTGATGAGGCACCCCAGGTTGCGGCGTAGGAAACAAATGCCATCAATCCTGGCTAACTTCTACAGAAGGTTGCCCGAGAAGTCGGAGTGTATTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

852

Amino Acids

96.93

Weight (kDa)

8.34

Isoelectric Point (pI)

42.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	5 - 95	4.5e-13	C2 domain
C2	PF00168	328 - 416	1.1e-16	C2 domain
C2	PF00168	484 - 592	6e-18	C2 domain
PRT_C	PF08372	703 - 850	4.6e-64	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	578
Acc16I	TGCGCA	1 cut(s)	2184
Acc36I	ACCTGC	2 cut(s)	532, 1443
Acc65I	GGTACC	2 cut(s)	1395, 2127
AccB1I	GGYRCC	3 cut(s)	1395, 2127, 2466
AccB7I	CCANNNNNTGG	1 cut(s)	1967
AccBSI	CCGCTC	2 cut(s)	951, 2326
AccI	GTMKAC	2 cut(s)	804, 1060
AccII	CGCG	4 cut(s)	357, 630, 1752, 2364
AccIII	TCCGGA	2 cut(s)	784, 1719
AclWI	GGATC	5 cut(s)	176, 1625, 1923, 2351, 2364
AcoI	YGGCCR	1 cut(s)	1851
AcsI	RAATTY	2 cut(s)	2207, 2336
AcuI	CTGAAG	2 cut(s)	398, 912
AfiI	CCNNNNNNNGG	5 cut(s)	262, 530, 1251, 1967, 2478
AflIII	ACRYGT	4 cut(s)	628, 943, 1311, 1989
AgsI	TTSAA	8 cut(s)	1100, 1184, 1240, 1686, 1877, 1985, 2291, 2428
AjnI	CCWGG	7 cut(s)	274, 890, 1358, 1900, 2072, 2471, 2505
AjuI	GAANNNNNNNTTGG	4 cut(s)	666, 698, 1950, 1982
AloI	GAACNNNNNNTCC	2 cut(s)	80, 112
AluBI	AGCT	9 cut(s)	370, 598, 799, 869, 878, 932, 1462, 1922, 2197
AluI	AGCT	9 cut(s)	370, 598, 799, 869, 878, 932, 1462, 1922, 2197
Alw21I	GWGCWC	1 cut(s)	1464
Alw26I	GTCTC	7 cut(s)	49, 181, 564, 1205, 1320, 1499, 1642
AlwI	GGATC	5 cut(s)	176, 1625, 1923, 2351, 2364
AlwNI	CAGNNNCTG	2 cut(s)	1508, 2180
Ama87I	CYCGRG	2 cut(s)	768, 2531
Aor13HI	TCCGGA	2 cut(s)	784, 1719
AoxI	GGCC	4 cut(s)	213, 639, 1442, 1851
ApeKI	GCWGC	7 cut(s)	409, 932, 1438, 1897, 2003, 2034, 2180
ApoI	RAATTY	2 cut(s)	2207, 2336
Asp700I	GAANNNNTTC	2 cut(s)	879, 1225
Asp718I	GGTACC	2 cut(s)	1395, 2127
AspLEI	GCGC	3 cut(s)	2034, 2185, 2366
AspS9I	GGNCC	2 cut(s)	640, 1717
AsuHPI	GGTGA	4 cut(s)	430, 960, 1009, 1271
AsuII	TTCGAA	2 cut(s)	1726, 2117
AvaI	CYCGRG	2 cut(s)	768, 2531
AvaII	GGWCC	1 cut(s)	1717
AxyI	CCTNAGG	1 cut(s)	2027
BaeGI	GKGCMC	1 cut(s)	40
BalI	TGGCCA	1 cut(s)	1853
BamHI	GGATCC	1 cut(s)	2356
BanI	GGYRCC	3 cut(s)	1395, 2127, 2466
BanII	GRGCYC	2 cut(s)	115, 1464
BarI	GAAGNNNNNNTAC	2 cut(s)	2240, 2272
BbsI	GAAGAC	2 cut(s)	918, 1811
Bbv12I	GWGCWC	1 cut(s)	1464
BbvI	GCAGC	7 cut(s)	421, 919, 1450, 1909, 1990, 2046, 2167
BccI	CCATC	8 cut(s)	170, 421, 806, 1377, 1382, 2053, 2311, 2506
BcgI	CGANNNNNNTGC	2 cut(s)	530, 564
BciT130I	CCWGG	7 cut(s)	276, 892, 1360, 1902, 2074, 2473, 2507
BclI	TGATCA	2 cut(s)	1159, 1276
BcoDI	GTCTC	7 cut(s)	49, 181, 564, 1205, 1320, 1499, 1642
BfaI	CTAG	2 cut(s)	800, 1385
BfmI	CTRYAG	3 cut(s)	1436, 2004, 2518
BfuAI	ACCTGC	2 cut(s)	532, 1443
BisI	GCNGC	9 cut(s)	410, 933, 1439, 1442, 1898, 2004, 2035, 2181, 2480
BlsI	GCNGC	9 cut(s)	411, 934, 1440, 1443, 1899, 2005, 2036, 2182, 2481
Bme1390I	CCNGG	7 cut(s)	276, 892, 1360, 1902, 2074, 2473, 2507
Bme18I	GGWCC	1 cut(s)	1717
BmeT110I	CYCGRG	2 cut(s)	768, 2531
BmgT120I	GGNCC	2 cut(s)	640, 1717
BmiI	GGNNCC	6 cut(s)	783, 1397, 2024, 2129, 2358, 2468
BmrFI	CCNGG	7 cut(s)	276, 892, 1360, 1902, 2074, 2473, 2507
BmrI	ACTGGG	1 cut(s)	1518
BmsI	GCATC	4 cut(s)	292, 802, 1036, 1990
BmuI	ACTGGG	1 cut(s)	1518
BpiI	GAAGAC	2 cut(s)	918, 1811
Bpu10I	CCTNAGC	1 cut(s)	1950
Bpu14I	TTCGAA	2 cut(s)	1726, 2117
BpuEI	CTTGAG	2 cut(s)	849, 2287
BsaAI	YACGTR	1 cut(s)	985
BsaBI	GATNNNNATC	5 cut(s)	141, 1164, 1275, 1344, 1727
BsaJI	CCNNGG	4 cut(s)	256, 275, 1329, 2471
BsaWI	WCCGGW	2 cut(s)	784, 1719
BsaXI	ACNNNNNCTCC	4 cut(s)	80, 110, 2130, 2160
Bsc4I	CCNNNNNNNGG	5 cut(s)	262, 530, 1251, 1967, 2478
Bse1I	ACTGG	4 cut(s)	75, 578, 776, 1513
Bse21I	CCTNAGG	1 cut(s)	2027
Bse8I	GATNNNNATC	5 cut(s)	141, 1164, 1275, 1344, 1727
BseAI	TCCGGA	2 cut(s)	784, 1719
BseBI	CCWGG	7 cut(s)	276, 892, 1360, 1902, 2074, 2473, 2507
BseDI	CCNNGG	4 cut(s)	256, 275, 1329, 2471
BseGI	GGATG	2 cut(s)	817, 2311
BseJI	GATNNNNATC	5 cut(s)	141, 1164, 1275, 1344, 1727
BseLI	CCNNNNNNNGG	5 cut(s)	262, 530, 1251, 1967, 2478
BseMII	CTCAG	4 cut(s)	44, 489, 1964, 2018
BseNI	ACTGG	4 cut(s)	75, 578, 776, 1513
BseRI	GAGGAG	3 cut(s)	378, 1223, 2284
BseSI	GKGCMC	1 cut(s)	40
BseXI	GCAGC	7 cut(s)	421, 919, 1450, 1909, 1990, 2046, 2167
BsgI	GTGCAG	1 cut(s)	1916
Bsh1236I	CGCG	4 cut(s)	357, 630, 1752, 2364
Bsh1285I	CGRYCG	3 cut(s)	103, 494, 2263
BshFI	GGCC	4 cut(s)	215, 641, 1444, 1853
BshNI	GGYRCC	3 cut(s)	1395, 2127, 2466
BsiEI	CGRYCG	3 cut(s)	103, 494, 2263
BsiHKAI	GWGCWC	1 cut(s)	1464
BsiHKCI	CYCGRG	2 cut(s)	768, 2531
BsiSI	CCGG	3 cut(s)	785, 1720, 2280
BsiWI	CGTACG	1 cut(s)	985
BslFI	GGGAC	3 cut(s)	275, 292, 1025
BslI	CCNNNNNNNGG	5 cut(s)	262, 530, 1251, 1967, 2478
BsmAI	GTCTC	7 cut(s)	49, 181, 564, 1205, 1320, 1499, 1642
BsmFI	GGGAC	3 cut(s)	275, 292, 1025
BsnI	GGCC	4 cut(s)	215, 641, 1444, 1853
BsoBI	CYCGRG	2 cut(s)	768, 2531
Bsp119I	TTCGAA	2 cut(s)	1726, 2117
Bsp1286I	GDGCHC	3 cut(s)	40, 115, 1464
Bsp13I	TCCGGA	2 cut(s)	784, 1719
Bsp1407I	TGTACA	1 cut(s)	1755
Bsp19I	CCATGG	1 cut(s)	1329
BspANI	GGCC	4 cut(s)	215, 641, 1444, 1853
BspCNI	CTCAG	4 cut(s)	45, 488, 1963, 2019
BspEI	TCCGGA	2 cut(s)	784, 1719
BspFNI	CGCG	4 cut(s)	357, 630, 1752, 2364
BspLI	GGNNCC	6 cut(s)	783, 1397, 2024, 2129, 2358, 2468
BspMAI	CTGCAG	2 cut(s)	1440, 2008
BspMI	ACCTGC	2 cut(s)	532, 1443
BspPI	GGATC	5 cut(s)	176, 1625, 1923, 2351, 2364
BspT104I	TTCGAA	2 cut(s)	1726, 2117
BspT107I	GGYRCC	3 cut(s)	1395, 2127, 2466
BsrBI	CCGCTC	2 cut(s)	951, 2326
BsrGI	TGTACA	1 cut(s)	1755
BsrI	ACTGG	4 cut(s)	75, 578, 776, 1513
BssECI	CCNNGG	4 cut(s)	256, 275, 1329, 2471
BssNAI	GTATAC	1 cut(s)	1061
BssT1I	CCWWGG	2 cut(s)	256, 1329
Bst1107I	GTATAC	1 cut(s)	1061
Bst2UI	CCWGG	7 cut(s)	276, 892, 1360, 1902, 2074, 2473, 2507
Bst4CI	ACNGT	7 cut(s)	495, 575, 1604, 1651, 1766, 2296, 2424
Bst6I	CTCTTC	1 cut(s)	1216
BstAPI	GCANNNNNTGC	1 cut(s)	2180
BstAUI	TGTACA	1 cut(s)	1755
BstBAI	YACGTR	1 cut(s)	985
BstBI	TTCGAA	2 cut(s)	1726, 2117
BstC8I	GCNNGC	4 cut(s)	194, 372, 846, 1947
BstDEI	CTNAG	5 cut(s)	53, 475, 1456, 1950, 2027
BstDSI	CCRYGG	1 cut(s)	1329
BstENI	CCTNNNNNAGG	1 cut(s)	260
BstF5I	GGATG	2 cut(s)	817, 2311
BstFNI	CGCG	4 cut(s)	357, 630, 1752, 2364
BstHHI	GCGC	3 cut(s)	2034, 2185, 2366
BstMAI	GTCTC	7 cut(s)	49, 181, 564, 1205, 1320, 1499, 1642
BstMCI	CGRYCG	3 cut(s)	103, 494, 2263
BstMWI	GCNNNNNNNGC	6 cut(s)	380, 389, 562, 875, 2031, 2180
BstNI	CCWGG	7 cut(s)	276, 892, 1360, 1902, 2074, 2473, 2507
BstNSI	RCATGY	4 cut(s)	947, 1315, 1993, 2174
BstSCI	CCNGG	7 cut(s)	274, 890, 1358, 1900, 2072, 2471, 2505
BstSFI	CTRYAG	3 cut(s)	1436, 2004, 2518
BstSLI	GKGCMC	1 cut(s)	40
BstSNI	TACGTA	1 cut(s)	985
BstUI	CGCG	4 cut(s)	357, 630, 1752, 2364
BstV1I	GCAGC	7 cut(s)	421, 919, 1450, 1909, 1990, 2046, 2167
BstV2I	GAAGAC	2 cut(s)	918, 1811
BstX2I	RGATCY	1 cut(s)	2356
BstXI	CCANNNNNNTGG	2 cut(s)	891, 978
BstYI	RGATCY	1 cut(s)	2356
BstZ17I	GTATAC	1 cut(s)	1061
Bsu36I	CCTNAGG	1 cut(s)	2027
BsuRI	GGCC	4 cut(s)	215, 641, 1444, 1853
BtgI	CCRYGG	1 cut(s)	1329
BtsCI	GGATG	2 cut(s)	817, 2311
BtsI	GCAGTG	2 cut(s)	1140, 1301
BtsIMutI	CAGTG	7 cut(s)	82, 783, 1082, 1140, 1301, 1609, 1762
BveI	ACCTGC	2 cut(s)	532, 1443
Cac8I	GCNNGC	4 cut(s)	194, 372, 846, 1947
CaiI	CAGNNNCTG	2 cut(s)	1508, 2180
CfoI	GCGC	3 cut(s)	2034, 2185, 2366
Cfr13I	GGNCC	2 cut(s)	640, 1717
CseI	GACGC	2 cut(s)	671, 2186
CspCI	CAANNNNNGTGG	2 cut(s)	1669, 1704
DdeI	CTNAG	5 cut(s)	53, 475, 1456, 1950, 2027
DraI	TTTAAA	1 cut(s)	1083
DrdI	GACNNNNNNGTC	1 cut(s)	578
DseDI	GACNNNNNNGTC	1 cut(s)	578
EaeI	YGGCCR	1 cut(s)	1851
Eam1104I	CTCTTC	1 cut(s)	1216
EarI	CTCTTC	1 cut(s)	1216
Ecl136II	GAGCTC	1 cut(s)	1462
Eco105I	TACGTA	1 cut(s)	985
Eco130I	CCWWGG	2 cut(s)	256, 1329
Eco24I	GRGCYC	2 cut(s)	115, 1464
Eco47I	GGWCC	1 cut(s)	1717
Eco53kI	GAGCTC	1 cut(s)	1462
Eco57I	CTGAAG	2 cut(s)	398, 912
Eco81I	CCTNAGG	1 cut(s)	2027
Eco88I	CYCGRG	2 cut(s)	768, 2531
EcoICRI	GAGCTC	1 cut(s)	1462
EcoNI	CCTNNNNNAGG	1 cut(s)	260
EcoO109I	RGGNCCY	1 cut(s)	640
EcoRII	CCWGG	7 cut(s)	274, 890, 1358, 1900, 2072, 2471, 2505
EcoT14I	CCWWGG	2 cut(s)	256, 1329
EcoT22I	ATGCAT	3 cut(s)	615, 1051, 1844
EcoT38I	GRGCYC	2 cut(s)	115, 1464
ErhI	CCWWGG	2 cut(s)	256, 1329
FalI	AAGNNNNNCTT	2 cut(s)	2030, 2062
FaqI	GGGAC	3 cut(s)	275, 292, 1025
FauI	CCCGC	2 cut(s)	362, 2346
FauNDI	CATATG	1 cut(s)	667
FbaI	TGATCA	2 cut(s)	1159, 1276
FblI	GTMKAC	2 cut(s)	804, 1060
Fnu4HI	GCNGC	9 cut(s)	410, 933, 1439, 1442, 1898, 2004, 2035, 2181, 2480
FokI	GGATG	2 cut(s)	824, 2318
FriOI	GRGCYC	2 cut(s)	115, 1464
Fsp4HI	GCNGC	9 cut(s)	410, 933, 1439, 1442, 1898, 2004, 2035, 2181, 2480
FspBI	CTAG	2 cut(s)	800, 1385
FspI	TGCGCA	1 cut(s)	2184
GlaI	GCGC	3 cut(s)	2033, 2184, 2365
GluI	GCNGC	9 cut(s)	410, 933, 1439, 1442, 1898, 2004, 2035, 2181, 2480
HaeIII	GGCC	4 cut(s)	215, 641, 1444, 1853
HapII	CCGG	3 cut(s)	785, 1720, 2280
HgaI	GACGC	2 cut(s)	671, 2186
HhaI	GCGC	3 cut(s)	2034, 2185, 2366
Hin6I	GCGC	3 cut(s)	2032, 2183, 2364
HinP1I	GCGC	3 cut(s)	2032, 2183, 2364
HindIII	AAGCTT	1 cut(s)	876
HpaII	CCGG	3 cut(s)	785, 1720, 2280
HphI	GGTGA	4 cut(s)	430, 960, 1009, 1271
Hpy166II	GTNNAC	8 cut(s)	421, 805, 961, 1061, 1614, 1756, 1758, 2155
Hpy8I	GTNNAC	8 cut(s)	421, 805, 961, 1061, 1614, 1756, 1758, 2155
HpyAV	CCTTC	8 cut(s)	373, 631, 1507, 1800, 1966, 2277, 2422, 2517
HpyCH4III	ACNGT	7 cut(s)	495, 575, 1604, 1651, 1766, 2296, 2424
HpyCH4IV	ACGT	1 cut(s)	984
HpyF10VI	GCNNNNNNNGC	6 cut(s)	380, 389, 562, 875, 2031, 2180
HpyF3I	CTNAG	5 cut(s)	53, 475, 1456, 1950, 2027
HpySE526I	ACGT	1 cut(s)	984
HspAI	GCGC	3 cut(s)	2032, 2183, 2364
Kpn2I	TCCGGA	2 cut(s)	784, 1719
KpnI	GGTACC	2 cut(s)	1399, 2131
Ksp22I	TGATCA	2 cut(s)	1159, 1276
LmnI	GCTCC	4 cut(s)	469, 787, 2022, 2323
Lsp1109I	GCAGC	7 cut(s)	421, 919, 1450, 1909, 1990, 2046, 2167
LweI	GCATC	4 cut(s)	292, 802, 1036, 1990
MaeI	CTAG	2 cut(s)	800, 1385
MaeII	ACGT	1 cut(s)	984
MaeIII	GTNAC	5 cut(s)	5, 197, 659, 1138, 2416
MbiI	CCGCTC	2 cut(s)	951, 2326
MflI	RGATCY	1 cut(s)	2356
MhlI	GDGCHC	3 cut(s)	40, 115, 1464
MlsI	TGGCCA	1 cut(s)	1853
MluCI	AATT	9 cut(s)	699, 906, 1281, 1641, 1681, 1707, 1814, 2207, 2336
MluI	ACGCGT	1 cut(s)	628
MluNI	TGGCCA	1 cut(s)	1853
MlyI	GAGTC	3 cut(s)	524, 760, 1520
MmeI	TCCRAC	2 cut(s)	2246, 2520
Mox20I	TGGCCA	1 cut(s)	1853
Mph1103I	ATGCAT	3 cut(s)	615, 1051, 1844
MroI	TCCGGA	2 cut(s)	784, 1719
MroXI	GAANNNNTTC	2 cut(s)	879, 1225
MscI	TGGCCA	1 cut(s)	1853
MseI	TTAA	6 cut(s)	327, 510, 1082, 1248, 1302, 2554
MslI	CAYNNNNRTG	2 cut(s)	1374, 2190
Msp20I	TGGCCA	1 cut(s)	1853
MspA1I	CMGCKG	2 cut(s)	932, 1441
MspI	CCGG	3 cut(s)	785, 1720, 2280
MspR9I	CCNGG	7 cut(s)	276, 892, 1360, 1902, 2074, 2473, 2507
MvaI	CCWGG	7 cut(s)	276, 892, 1360, 1902, 2074, 2473, 2507
MvnI	CGCG	4 cut(s)	357, 630, 1752, 2364
MwoI	GCNNNNNNNGC	6 cut(s)	380, 389, 562, 875, 2031, 2180
NcoI	CCATGG	1 cut(s)	1329
NdeI	CATATG	1 cut(s)	667
NlaIV	GGNNCC	6 cut(s)	783, 1397, 2024, 2129, 2358, 2468
NmuCI	GTSAC	4 cut(s)	197, 659, 1138, 2416
NsbI	TGCGCA	1 cut(s)	2184
NsiI	ATGCAT	3 cut(s)	615, 1051, 1844
NspI	RCATGY	4 cut(s)	947, 1315, 1993, 2174
NspV	TTCGAA	2 cut(s)	1726, 2117
PaeR7I	CTCGAG	1 cut(s)	768
PciI	ACATGT	3 cut(s)	943, 1311, 1989
PdmI	GAANNNNTTC	2 cut(s)	879, 1225
Pfl23II	CGTACG	1 cut(s)	985
PflMI	CCANNNNNTGG	1 cut(s)	1967
PfoI	TCCNGGA	1 cut(s)	1358
PkrI	GCNGC	9 cut(s)	411, 934, 1440, 1443, 1899, 2005, 2036, 2182, 2481
Ple19I	CGATCG	1 cut(s)	103
PleI	GAGTC	3 cut(s)	523, 760, 1520
PpsI	GAGTC	3 cut(s)	523, 760, 1520
Ppu21I	YACGTR	1 cut(s)	985
PscI	ACATGT	3 cut(s)	943, 1311, 1989
Psp124BI	GAGCTC	1 cut(s)	1464
Psp6I	CCWGG	7 cut(s)	274, 890, 1358, 1900, 2072, 2471, 2505
PspGI	CCWGG	7 cut(s)	274, 890, 1358, 1900, 2072, 2471, 2505
PspLI	CGTACG	1 cut(s)	985
PspN4I	GGNNCC	6 cut(s)	783, 1397, 2024, 2129, 2358, 2468
PspPI	GGNCC	2 cut(s)	640, 1717
PspXI	VCTCGAGB	1 cut(s)	768
PsrI	GAACNNNNNNTAC	2 cut(s)	2111, 2143
PstI	CTGCAG	2 cut(s)	1440, 2008
PstNI	CAGNNNCTG	2 cut(s)	1508, 2180
PsuI	RGATCY	1 cut(s)	2356
PvuI	CGATCG	1 cut(s)	103
PvuII	CAGCTG	1 cut(s)	932
RseI	CAYNNNNRTG	2 cut(s)	1374, 2190
SacI	GAGCTC	1 cut(s)	1464
SaqAI	TTAA	6 cut(s)	327, 510, 1082, 1248, 1302, 2554
SatI	GCNGC	9 cut(s)	410, 933, 1439, 1442, 1898, 2004, 2035, 2181, 2480
Sau96I	GGNCC	2 cut(s)	640, 1717
SchI	GAGTC	3 cut(s)	524, 760, 1520
ScrFI	CCNGG	7 cut(s)	276, 892, 1360, 1902, 2074, 2473, 2507
SduI	GDGCHC	3 cut(s)	40, 115, 1464
SfaNI	GCATC	4 cut(s)	292, 802, 1036, 1990
SfcI	CTRYAG	3 cut(s)	1436, 2004, 2518
Sfr274I	CTCGAG	1 cut(s)	768
SfuI	TTCGAA	2 cut(s)	1726, 2117
SinI	GGWCC	1 cut(s)	1717
SlaI	CTCGAG	1 cut(s)	768
SmiMI	CAYNNNNRTG	2 cut(s)	1374, 2190
SmlI	CTYRAG	4 cut(s)	11, 768, 864, 2266
SmoI	CTYRAG	4 cut(s)	11, 768, 864, 2266
SnaBI	TACGTA	1 cut(s)	985
Sse9I	AATT	9 cut(s)	699, 906, 1281, 1641, 1681, 1707, 1814, 2207, 2336
SspMI	CTAG	2 cut(s)	800, 1385
SstI	GAGCTC	1 cut(s)	1464
StyD4I	CCNGG	7 cut(s)	274, 890, 1358, 1900, 2072, 2471, 2505
StyI	CCWWGG	2 cut(s)	256, 1329
TaaI	ACNGT	7 cut(s)	495, 575, 1604, 1651, 1766, 2296, 2424
TaiI	ACGT	1 cut(s)	987
TaqII	GACCGA	1 cut(s)	1058
TasI	AATT	9 cut(s)	699, 906, 1281, 1641, 1681, 1707, 1814, 2207, 2336
TatI	WGTACW	3 cut(s)	1611, 1755, 1992
TauI	GCSGC	2 cut(s)	1444, 2482
Tru1I	TTAA	6 cut(s)	327, 510, 1082, 1248, 1302, 2554
Tru9I	TTAA	6 cut(s)	327, 510, 1082, 1248, 1302, 2554
TscAI	CASTG	7 cut(s)	82, 783, 1082, 1147, 1301, 1609, 1769
TseFI	GTSAC	4 cut(s)	197, 659, 1138, 2416
TseI	GCWGC	7 cut(s)	409, 932, 1438, 1897, 2003, 2034, 2180
Tsp45I	GTSAC	4 cut(s)	197, 659, 1138, 2416
TspGWI	ACGGA	1 cut(s)	1234
TspRI	CASTG	7 cut(s)	82, 783, 1082, 1147, 1301, 1609, 1769
Van91I	CCANNNNNTGG	1 cut(s)	1967
VpaK11BI	GGWCC	1 cut(s)	1717
XagI	CCTNNNNNAGG	1 cut(s)	260
XapI	RAATTY	2 cut(s)	2207, 2336
XbaI	TCTAGA	1 cut(s)	1384
XceI	RCATGY	4 cut(s)	947, 1315, 1993, 2174
XcmI	CCANNNNNNNNNTGG	1 cut(s)	82
XhoI	CTCGAG	1 cut(s)	768
XmiI	GTMKAC	2 cut(s)	804, 1060
XmnI	GAANNNNTTC	2 cut(s)	879, 1225
XspI	CTAG	2 cut(s)	800, 1385
Zsp2I	ATGCAT	3 cut(s)	615, 1051, 1844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.