Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000221.1

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Forward (+)

159225 .. 161027

Gene Structure 1803 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000221.1_g000032.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

atgaacaacctcaagctaggggtggatgtggttagtgcccacaatcttttgcctaaagatgggcaaggttcatccaatgcatttgtggagctgtacttcgatggccagaggttccgcagcactataaaagaaaaggatctcagccctgtttggaacgagagcttctacttcaacatctctgatccttcaaacctccactatcttagtctcgaggcctatgtctacaacgatgtcaaagctactcactccaggtcctttcttggaaagatcagcctcactggaaattcatttgtcccctattctgatgctgttgtcttgcattaccctttggaaaagcgtggcatcttctcacgtgtaagaggagagctcggcttgaaggtttatgttactgatgacccaacaattaagtcctccatgccattgcctgcttctgaatccgttactgatcaggatccaggccttgcacagacccaaggagtttcgactcctggcatgagctcatttcggagtgagaaatctcagacaagacacacctttcaccatctgccgaatccaggtcaagagagccaacatcagcatcatgcttctgctgcaccagatactcattatgtacccaagtatgaagttgatcaaatgaaatctgaaccgcagcctgcaaagctggttcgcatgtactctgcttcagcatcacaacctgttgactatgcacttaaagagacaagcccttaccttggaggtgggagagttgttggtggacgtgttattcacggagacaagactgcaagcacctatgatctagttgaaaggatgtactttctctatgtaagggttgttaaagctcgcgagcttcctgccatggatgttactggaagtctagatccttatgttgaagctagaattggaaactacaaagggattacaaaacactacgagaagcaacaaaatccagtatggaatcaagttttcgctttttcaaaggaccgcatgcaagcatctgtgttagaagttgtggttaaagacaaggacctgctaaaagatgactttgtgggaattgtgaggttcgacatcaatgaggttccattaagagttccacctgacagtcctctagctccagagtggtaccgacttcaggacaaaaaaggccaaaagattgagggggagttgatgcttgcagtctggattggcactcaagcagatgaggctttttctgatgcatggcactctgatgctgctacacctgttgatagctcaccagctgcatccgcagtgattcgctcaaaggtgtatcatgcaccaaggttgtggtatgtacgtgtgaatgttatagaggcacaagacctgtttgcatcagagaagaatcgtttcccagatgcatatgtcaaggtacagattggaaaccaggttatgaagacaagaacacttcaggctcggaatctaaacccactttggaatgaagaccttttatttgtggcttcggagccctttgaagatcatctggtcatttcagttgaggaccgtgttggtcctggcaaggatgaaatccttgggagggtcatactacctctaaactctgtagataggcgtgccgatgatcgtatgatccattccagatggtttaatctcaaaaagccagttgctgtggatgtggatcagttgaaagaagataagttctcaagccgcattcatcttcgagtttgtcttgatggaggataccatgttcttgatgagtccactcattatagtagtgacttacgccccacggcactgcaggctgctgcttctttttttatttttgtttgttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

600

Amino Acids

67.59

Weight (kDa)

6.3

Isoelectric Point (pI)

45.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1035
Acc65I	GGTACC	1 cut(s)	1119
AccB1I	GGYRCC	1 cut(s)	1119
AccI	GTMKAC	1 cut(s)	222
AccII	CGCG	1 cut(s)	843
AciI	CCGC	5 cut(s)	115, 647, 982, 1263, 1678
AclWI	GGATC	7 cut(s)	144, 176, 446, 459, 872, 1594, 1656
AcoI	YGGCCR	1 cut(s)	103
AcsI	RAATTY	1 cut(s)	283
AcuI	CTGAAG	3 cut(s)	666, 1112, 1406
AcvI	CACGTG	1 cut(s)	353
AfaI	GTAC	7 cut(s)	95, 612, 674, 812, 1121, 1311, 1386
AfiI	CCNNNNNNNGG	5 cut(s)	59, 554, 731, 1129, 1549
AflIII	ACRYGT	3 cut(s)	352, 757, 1312
AgsI	TTSAA	8 cut(s)	172, 189, 376, 803, 890, 975, 1487, 1657
AjiI	CACGTC	1 cut(s)	758
AjnI	CCWGG	6 cut(s)	248, 454, 487, 553, 1398, 1525
AjuI	GAANNNNNNNTTGG	2 cut(s)	882, 914
AloI	GAACNNNNNNTCC	2 cut(s)	1701, 1733
Alw21I	GWGCWC	2 cut(s)	369, 500
Alw26I	GTCTC	3 cut(s)	212, 710, 765
AlwI	GGATC	7 cut(s)	144, 176, 446, 459, 872, 1594, 1656
AlwNI	CAGNNNCTG	1 cut(s)	1637
Ama87I	CYCGRG	1 cut(s)	209
AoxI	GGCC	4 cut(s)	103, 213, 457, 1141
ApeKI	GCWGC	7 cut(s)	117, 590, 649, 1229, 1256, 1772, 1775
ApoI	RAATTY	1 cut(s)	283
ArsI	GACNNNNNNTTYG	2 cut(s)	1448, 1480
Asp700I	GAANNNNTTC	1 cut(s)	1361
Asp718I	GGTACC	1 cut(s)	1119
AspS9I	GGNCC	5 cut(s)	252, 979, 1024, 1513, 1523
AsuHPI	GGTGA	2 cut(s)	530, 1242
AvaI	CYCGRG	1 cut(s)	209
AvaII	GGWCC	5 cut(s)	252, 979, 1024, 1513, 1523
BaeGI	GKGCMC	1 cut(s)	40
BalI	TGGCCA	1 cut(s)	105
BamHI	GGATCC	1 cut(s)	451
BanI	GGYRCC	1 cut(s)	1119
BanII	GRGCYC	3 cut(s)	369, 500, 1482
BbrPI	CACGTG	1 cut(s)	353
BbsI	GAAGAC	2 cut(s)	1415, 1461
Bbv12I	GWGCWC	2 cut(s)	369, 500
BbvI	GCAGC	7 cut(s)	129, 577, 661, 1216, 1243, 1759, 1762
BccI	CCATC	5 cut(s)	53, 95, 549, 1605, 1697
BceAI	ACGGC	1 cut(s)	1776
BcgI	CGANNNNNNTGC	2 cut(s)	833, 867
BciT130I	CCWGG	6 cut(s)	250, 456, 489, 555, 1400, 1527
BciVI	GTATCC	1 cut(s)	1703
BclI	TGATCA	2 cut(s)	445, 628
BcoDI	GTCTC	3 cut(s)	212, 710, 765
BfaI	CTAG	5 cut(s)	17, 797, 875, 894, 1106
BfmI	CTRYAG	2 cut(s)	1572, 1766
BfuAI	ACCTGC	1 cut(s)	1035
BfuI	GTATCC	1 cut(s)	1703
BisI	GCNGC	8 cut(s)	118, 591, 650, 1230, 1257, 1678, 1773, 1776
BlsI	GCNGC	8 cut(s)	119, 592, 651, 1231, 1258, 1679, 1774, 1777
Bme1390I	CCNGG	6 cut(s)	250, 456, 489, 555, 1400, 1527
Bme18I	GGWCC	5 cut(s)	252, 979, 1024, 1513, 1523
BmeT110I	CYCGRG	1 cut(s)	209
BmgBI	CACGTC	1 cut(s)	758
BmgT120I	GGNCC	5 cut(s)	252, 979, 1024, 1513, 1523
BmiI	GGNNCC	5 cut(s)	113, 453, 1077, 1121, 1479
BmrFI	CCNGG	6 cut(s)	250, 456, 489, 555, 1400, 1527
BpiI	GAAGAC	2 cut(s)	1415, 1461
BplI	GAGNNNNNCTC	2 cut(s)	351, 383
BpmI	CTGGAG	2 cut(s)	232, 1095
BpuEI	CTTGAG	2 cut(s)	1173, 1657
BsaAI	YACGTR	2 cut(s)	353, 1313
BsaBI	GATNNNNATC	2 cut(s)	450, 1647
BsaJI	CCNNGG	6 cut(s)	472, 730, 855, 1295, 1543, 1758
Bsc4I	CCNNNNNNNGG	5 cut(s)	59, 554, 731, 1129, 1549
Bse1I	ACTGG	4 cut(s)	283, 871, 947, 1631
Bse3DI	GCAATG	1 cut(s)	419
Bse8I	GATNNNNATC	2 cut(s)	450, 1647
BseBI	CCWGG	6 cut(s)	250, 456, 489, 555, 1400, 1527
BseDI	CCNNGG	6 cut(s)	472, 730, 855, 1295, 1543, 1758
BseGI	GGATG	7 cut(s)	31, 71, 813, 865, 1259, 1540, 1648
BseJI	GATNNNNATC	2 cut(s)	450, 1647
BseLI	CCNNNNNNNGG	5 cut(s)	59, 554, 731, 1129, 1549
BseMI	GCAATG	1 cut(s)	419
BseMII	CTCAG	2 cut(s)	154, 533
BseNI	ACTGG	4 cut(s)	283, 871, 947, 1631
BseRI	GAGGAG	1 cut(s)	375
BseSI	GKGCMC	1 cut(s)	40
BseXI	GCAGC	7 cut(s)	129, 577, 661, 1216, 1243, 1759, 1762
BsgI	GTGCAG	1 cut(s)	576
Bsh1236I	CGCG	1 cut(s)	843
BshFI	GGCC	4 cut(s)	105, 215, 459, 1143
BshNI	GGYRCC	1 cut(s)	1119
BsiHKAI	GWGCWC	2 cut(s)	369, 500
BsiHKCI	CYCGRG	1 cut(s)	209
BslFI	GGGAC	1 cut(s)	278
BslI	CCNNNNNNNGG	5 cut(s)	59, 554, 731, 1129, 1549
BsmAI	GTCTC	3 cut(s)	212, 710, 765
BsmFI	GGGAC	1 cut(s)	278
BsmI	GAATGC	1 cut(s)	1680
BsnI	GGCC	4 cut(s)	105, 215, 459, 1143
BsoBI	CYCGRG	1 cut(s)	209
Bsp1286I	GDGCHC	4 cut(s)	40, 369, 500, 1482
Bsp19I	CCATGG	1 cut(s)	855
Bsp68I	TCGCGA	1 cut(s)	843
BspACI	CCGC	5 cut(s)	115, 647, 982, 1263, 1678
BspANI	GGCC	4 cut(s)	105, 215, 459, 1143
BspCNI	CTCAG	2 cut(s)	153, 532
BspFNI	CGCG	1 cut(s)	843
BspLI	GGNNCC	5 cut(s)	113, 453, 1077, 1121, 1479
BspMAI	CTGCAG	1 cut(s)	1770
BspMI	ACCTGC	1 cut(s)	1035
BspPI	GGATC	7 cut(s)	144, 176, 446, 459, 872, 1594, 1656
BspT107I	GGYRCC	1 cut(s)	1119
BsrDI	GCAATG	1 cut(s)	419
BsrI	ACTGG	4 cut(s)	283, 871, 947, 1631
BssECI	CCNNGG	6 cut(s)	472, 730, 855, 1295, 1543, 1758
BssT1I	CCWWGG	5 cut(s)	472, 730, 855, 1295, 1543
Bst2UI	CCWGG	6 cut(s)	250, 456, 489, 555, 1400, 1527
Bst4CI	ACNGT	2 cut(s)	1100, 1517
BstBAI	YACGTR	2 cut(s)	353, 1313
BstDEI	CTNAG	3 cut(s)	140, 203, 519
BstDSI	CCRYGG	2 cut(s)	855, 1758
BstF5I	GGATG	7 cut(s)	31, 71, 813, 865, 1259, 1540, 1648
BstFNI	CGCG	1 cut(s)	843
BstMAI	GTCTC	3 cut(s)	212, 710, 765
BstMWI	GCNNNNNNNGC	5 cut(s)	590, 658, 1199, 1262, 1769
BstNI	CCWGG	6 cut(s)	250, 456, 489, 555, 1400, 1527
BstNSI	RCATGY	2 cut(s)	673, 988
BstSCI	CCNGG	6 cut(s)	248, 454, 487, 553, 1398, 1525
BstSFI	CTRYAG	2 cut(s)	1572, 1766
BstSLI	GKGCMC	1 cut(s)	40
BstUI	CGCG	1 cut(s)	843
BstV1I	GCAGC	7 cut(s)	129, 577, 661, 1216, 1243, 1759, 1762
BstV2I	GAAGAC	2 cut(s)	1415, 1461
BstX2I	RGATCY	3 cut(s)	136, 451, 877
BstXI	CCANNNNNNTGG	1 cut(s)	1302
BstYI	RGATCY	3 cut(s)	136, 451, 877
BsuI	GTATCC	1 cut(s)	1703
BsuRI	GGCC	4 cut(s)	105, 215, 459, 1143
BtgI	CCRYGG	2 cut(s)	855, 1758
BtrI	CACGTC	1 cut(s)	758
BtsCI	GGATG	7 cut(s)	31, 71, 813, 865, 1259, 1540, 1648
BtsI	GCAGTG	2 cut(s)	1272, 1763
BtsIMutI	CAGTG	3 cut(s)	276, 1272, 1763
BtuMI	TCGCGA	1 cut(s)	843
BveI	ACCTGC	1 cut(s)	1035
CaiI	CAGNNNCTG	1 cut(s)	1637
Cfr13I	GGNCC	5 cut(s)	252, 979, 1024, 1513, 1523
CsiI	ACCWGGT	1 cut(s)	1398
Csp6I	GTAC	7 cut(s)	94, 611, 673, 811, 1120, 1310, 1385
CviAII	CATG	9 cut(s)	415, 493, 581, 670, 856, 985, 1215, 1289, 1715
CviQI	GTAC	7 cut(s)	94, 611, 673, 811, 1120, 1310, 1385
DdeI	CTNAG	3 cut(s)	140, 203, 519
EaeI	YGGCCR	1 cut(s)	103
Ecl136II	GAGCTC	2 cut(s)	367, 498
Eco130I	CCWWGG	5 cut(s)	472, 730, 855, 1295, 1543
Eco147I	AGGCCT	2 cut(s)	215, 459
Eco24I	GRGCYC	3 cut(s)	369, 500, 1482
Eco47I	GGWCC	5 cut(s)	252, 979, 1024, 1513, 1523
Eco53kI	GAGCTC	2 cut(s)	367, 498
Eco57I	CTGAAG	3 cut(s)	666, 1112, 1406
Eco72I	CACGTG	1 cut(s)	353
Eco88I	CYCGRG	1 cut(s)	209
EcoICRI	GAGCTC	2 cut(s)	367, 498
EcoO109I	RGGNCCY	2 cut(s)	252, 1024
EcoRII	CCWGG	6 cut(s)	248, 454, 487, 553, 1398, 1525
EcoT14I	CCWWGG	5 cut(s)	472, 730, 855, 1295, 1543
EcoT22I	ATGCAT	3 cut(s)	82, 1216, 1375
EcoT38I	GRGCYC	3 cut(s)	369, 500, 1482
ErhI	CCWWGG	5 cut(s)	472, 730, 855, 1295, 1543
FaeI	CATG	9 cut(s)	418, 496, 584, 673, 859, 988, 1218, 1292, 1718
FaqI	GGGAC	1 cut(s)	278
FatI	CATG	9 cut(s)	414, 492, 580, 669, 855, 984, 1214, 1288, 1714
FauNDI	CATATG	1 cut(s)	1375
FbaI	TGATCA	2 cut(s)	445, 628
FblI	GTMKAC	1 cut(s)	222
Fnu4HI	GCNGC	8 cut(s)	118, 591, 650, 1230, 1257, 1678, 1773, 1776
FokI	GGATG	7 cut(s)	38, 58, 820, 872, 1246, 1547, 1655
FriOI	GRGCYC	3 cut(s)	369, 500, 1482
Fsp4HI	GCNGC	8 cut(s)	118, 591, 650, 1230, 1257, 1678, 1773, 1776
FspBI	CTAG	5 cut(s)	17, 797, 875, 894, 1106
GluI	GCNGC	8 cut(s)	118, 591, 650, 1230, 1257, 1678, 1773, 1776
GsuI	CTGGAG	2 cut(s)	232, 1095
HaeIII	GGCC	4 cut(s)	105, 215, 459, 1143
Hin1II	CATG	9 cut(s)	418, 496, 584, 673, 859, 988, 1218, 1292, 1718
HincII	GTYRAC	1 cut(s)	700
HindII	GTYRAC	1 cut(s)	700
HinfI	GANTC	8 cut(s)	434, 484, 550, 955, 1270, 1357, 1432, 1727
HphI	GGTGA	2 cut(s)	530, 1242
Hpy166II	GTNNAC	4 cut(s)	223, 700, 755, 1731
Hpy8I	GTNNAC	4 cut(s)	223, 700, 755, 1731
HpyAV	CCTTC	2 cut(s)	195, 370
HpyCH4III	ACNGT	2 cut(s)	1100, 1517
HpyCH4IV	ACGT	3 cut(s)	352, 757, 1312
HpyF10VI	GCNNNNNNNGC	5 cut(s)	590, 658, 1199, 1262, 1769
HpyF3I	CTNAG	3 cut(s)	140, 203, 519
HpySE526I	ACGT	3 cut(s)	352, 757, 1312
Hsp92II	CATG	9 cut(s)	418, 496, 584, 673, 859, 988, 1218, 1292, 1718
KpnI	GGTACC	1 cut(s)	1123
Ksp22I	TGATCA	2 cut(s)	445, 628
LmnI	GCTCC	3 cut(s)	88, 1114, 1477
Lsp1109I	GCAGC	7 cut(s)	129, 577, 661, 1216, 1243, 1759, 1762
MabI	ACCWGGT	1 cut(s)	1398
MaeI	CTAG	5 cut(s)	17, 797, 875, 894, 1106
MaeII	ACGT	3 cut(s)	352, 757, 1312
MaeIII	GTNAC	4 cut(s)	385, 439, 862, 1745
MboII	GAAGA	7 cut(s)	337, 1366, 1420, 1466, 1499, 1673, 1679
MflI	RGATCY	3 cut(s)	136, 451, 877
MhlI	GDGCHC	4 cut(s)	40, 369, 500, 1482
MlsI	TGGCCA	1 cut(s)	105
MluCI	AATT	4 cut(s)	283, 402, 897, 1050
MluNI	TGGCCA	1 cut(s)	105
MlyI	GAGTC	2 cut(s)	478, 1736
Mox20I	TGGCCA	1 cut(s)	105
Mph1103I	ATGCAT	3 cut(s)	82, 1216, 1375
MroXI	GAANNNNTTC	1 cut(s)	1361
MscI	TGGCCA	1 cut(s)	105
MseI	TTAA	6 cut(s)	405, 711, 834, 1014, 1082, 1617
MslI	CAYNNNNRTG	1 cut(s)	1224
Msp20I	TGGCCA	1 cut(s)	105
MspA1I	CMGCKG	1 cut(s)	1256
MspR9I	CCNGG	6 cut(s)	250, 456, 489, 555, 1400, 1527
Mva1269I	GAATGC	1 cut(s)	1680
MvaI	CCWGG	6 cut(s)	250, 456, 489, 555, 1400, 1527
MvnI	CGCG	1 cut(s)	843
MwoI	GCNNNNNNNGC	5 cut(s)	590, 658, 1199, 1262, 1769
NcoI	CCATGG	1 cut(s)	855
NdeI	CATATG	1 cut(s)	1375
NlaIII	CATG	9 cut(s)	418, 496, 584, 673, 859, 988, 1218, 1292, 1718
NlaIV	GGNNCC	5 cut(s)	113, 453, 1077, 1121, 1479
NmeAIII	GCCGAG	1 cut(s)	348
NmuCI	GTSAC	1 cut(s)	1745
NruI	TCGCGA	1 cut(s)	843
NsiI	ATGCAT	3 cut(s)	82, 1216, 1375
NspI	RCATGY	2 cut(s)	673, 988
PaeI	GCATGC	1 cut(s)	988
PaeR7I	CTCGAG	1 cut(s)	209
PceI	AGGCCT	2 cut(s)	215, 459
PctI	GAATGC	1 cut(s)	1680
PdmI	GAANNNNTTC	1 cut(s)	1361
PfeI	GAWTC	6 cut(s)	434, 550, 955, 1270, 1357, 1432
PkrI	GCNGC	8 cut(s)	119, 592, 651, 1231, 1258, 1679, 1774, 1777
PleI	GAGTC	2 cut(s)	478, 1735
PmaCI	CACGTG	1 cut(s)	353
PmlI	CACGTG	1 cut(s)	353
PpsI	GAGTC	2 cut(s)	478, 1735
Ppu21I	YACGTR	2 cut(s)	353, 1313
PpuMI	RGGWCCY	2 cut(s)	252, 1024
Psp124BI	GAGCTC	2 cut(s)	369, 500
Psp5II	RGGWCCY	2 cut(s)	252, 1024
Psp6I	CCWGG	6 cut(s)	248, 454, 487, 553, 1398, 1525
PspCI	CACGTG	1 cut(s)	353
PspGI	CCWGG	6 cut(s)	248, 454, 487, 553, 1398, 1525
PspN4I	GGNNCC	5 cut(s)	113, 453, 1077, 1121, 1479
PspPI	GGNCC	5 cut(s)	252, 979, 1024, 1513, 1523
PspPPI	RGGWCCY	2 cut(s)	252, 1024
PstI	CTGCAG	1 cut(s)	1770
PstNI	CAGNNNCTG	1 cut(s)	1637
PsuI	RGATCY	3 cut(s)	136, 451, 877
PvuII	CAGCTG	1 cut(s)	1256
RruI	TCGCGA	1 cut(s)	843
RsaI	GTAC	7 cut(s)	95, 612, 674, 812, 1121, 1311, 1386
RsaNI	GTAC	7 cut(s)	94, 611, 673, 811, 1120, 1310, 1385
RseI	CAYNNNNRTG	1 cut(s)	1224
SacI	GAGCTC	2 cut(s)	369, 500
SaqAI	TTAA	6 cut(s)	405, 711, 834, 1014, 1082, 1617
SatI	GCNGC	8 cut(s)	118, 591, 650, 1230, 1257, 1678, 1773, 1776
Sau96I	GGNCC	5 cut(s)	252, 979, 1024, 1513, 1523
SchI	GAGTC	2 cut(s)	478, 1736
ScrFI	CCNGG	6 cut(s)	250, 456, 489, 555, 1400, 1527
SduI	GDGCHC	4 cut(s)	40, 369, 500, 1482
SexAI	ACCWGGT	1 cut(s)	1398
SfcI	CTRYAG	2 cut(s)	1572, 1766
Sfr274I	CTCGAG	1 cut(s)	209
SinI	GGWCC	5 cut(s)	252, 979, 1024, 1513, 1523
SlaI	CTCGAG	1 cut(s)	209
SmiMI	CAYNNNNRTG	1 cut(s)	1224
SmlI	CTYRAG	4 cut(s)	11, 209, 1188, 1672
SmoI	CTYRAG	4 cut(s)	11, 209, 1188, 1672
SphI	GCATGC	1 cut(s)	988
Sse9I	AATT	4 cut(s)	283, 402, 897, 1050
SseBI	AGGCCT	2 cut(s)	215, 459
SsiI	CCGC	5 cut(s)	115, 647, 982, 1263, 1678
SspMI	CTAG	5 cut(s)	17, 797, 875, 894, 1106
SstI	GAGCTC	2 cut(s)	369, 500
StuI	AGGCCT	2 cut(s)	215, 459
StyD4I	CCNGG	6 cut(s)	248, 454, 487, 553, 1398, 1525
StyI	CCWWGG	5 cut(s)	472, 730, 855, 1295, 1543
TaaI	ACNGT	2 cut(s)	1100, 1517
TaiI	ACGT	3 cut(s)	355, 760, 1315
TaqI	TCGA	5 cut(s)	99, 210, 482, 1062, 1690
TasI	AATT	4 cut(s)	283, 402, 897, 1050
TatI	WGTACW	3 cut(s)	93, 672, 810
TauI	GCSGC	1 cut(s)	1680
TfiI	GAWTC	6 cut(s)	434, 550, 955, 1270, 1357, 1432
Tru1I	TTAA	6 cut(s)	405, 711, 834, 1014, 1082, 1617
Tru9I	TTAA	6 cut(s)	405, 711, 834, 1014, 1082, 1617
TscAI	CASTG	3 cut(s)	283, 1272, 1770
TseFI	GTSAC	1 cut(s)	1745
TseI	GCWGC	7 cut(s)	117, 590, 649, 1229, 1256, 1772, 1775
Tsp45I	GTSAC	1 cut(s)	1745
TspDTI	ATGAA	9 cut(s)	17, 60, 276, 636, 650, 1421, 1467, 1551, 1673
TspGWI	ACGGA	2 cut(s)	427, 783
TspRI	CASTG	3 cut(s)	283, 1272, 1770
VpaK11BI	GGWCC	5 cut(s)	252, 979, 1024, 1513, 1523
XapI	RAATTY	1 cut(s)	283
XbaI	TCTAGA	1 cut(s)	874
XceI	RCATGY	2 cut(s)	673, 988
XcmI	CCANNNNNNNNNTGG	1 cut(s)	82
XhoI	CTCGAG	1 cut(s)	209
XmiI	GTMKAC	1 cut(s)	222
XmnI	GAANNNNTTC	1 cut(s)	1361
XspI	CTAG	5 cut(s)	17, 797, 875, 894, 1106
Zsp2I	ATGCAT	3 cut(s)	82, 1216, 1375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.