Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Forward (+)

9082682 .. 9085678

Gene Structure 2997 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g08090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2997 bp

ATGACCTTATGCCCAAAGATGGGCAGGGCGCAGCCAGTGCATTTGTGGAGCTCCACTTTGATCGATCAGAGATACCAAACCACTACGAAAGAAAAAGATCTCAATCCTGTTTGGAATGAGAGCTTCTACTTCAACATTTCTGATCCAAACAACCTCTCTAACCTCAGTCTTGAAGCCTGTATTTACCACCATGGTAAAGGCAACTCCAAATCTTTCCTCGGAAAGGTTTGTCTTACTGGGACATCATTTGTTCCATATTCTGATGCTGTTGTTTTGCACTACCCTCTGGAGAAGCGAGGCCTTTTTTCACGCGTTAAAGGAGAGCTTGGTCTAAAAGTTTTTGTTACTGATGACCCGTCTATAAGATCCTCAAATCCACTTCCTGCACTGGATGCGTCTCTGGACAGAGATTCACGGTCTGCACATGTTCAATCACAATCACAAGTTGTTCCAAATGTTAACTCAAACATGTTGTCCAATGATAAAGCTGCGTCGAGACACACATTTCATCACCTTCCAAATCCCAACCTAGCACAGCAGCAGAATATTTCTTCAGCGGCAATGCAGCCGTCAGTGAACTATGGGATGCAGGAAATGAGGTCTGAACCACAGTCTTCTAAAGTTGTTCGCAGCATGTACTCAGGTTCATCAGCTCAAGTGCCTGATTATTCCCTTAAAGAGACGAGCCCTTACCTTGGAGGGGGGCAAATTGTTGGAGGGCGAGTCATACCTGGAGACAGGCCATCTGGCACCTATGACCTTGTTGAAAAGATGCAATACCTGTTTGTACGAGTTGTGAAAGCCCGTGACCTTCCTCACAAGGATATAACAGGTAGCCTTGATCCATATGTTGAAGTGAGAGTTGGTAACTACAAAGGAACTACAAGGCATTTTGAGAAAAGACAGAACCCTGAATGGAACGAGGTATTTGCTTTTGCAAAGGACAATCAGCAATCATCTGTTTTGGACGTTGTAGTCAAAGACAAGAATCTTTTGAAAGATGATTTTGTTGGGTTAGTACGGTTTGATCTCCATGAAGTTCCTCATCGAGTTCCACCAGACAGCCCATTGGCTCCAGAATGGTATCGGCTCGCAGACAAGGATGGAAGGAAGGACAAAGGAGAACTGATGCTTGCAGTATGGTTTGGCACACAAGCTGATGAGGCATTTCCAGAGGCCTGGCATTCAGATGCAATTGGTCCTGATGATGGTTCTTCGGTTGCTTATGGACACATCCGTTCAAAAGTTTACCATTCACCAAGACTATGGTATGTTCGAGTAAATGTGATTGAGGCACAGGACTTGGTTCTGCACGACAGGTCCCGCTTCCCAGATGCATATGCAAAAGTACAGATTGGTAATCAGGTTTTAAAGACAAAACCAGTTCAATCTCGAGCTCTGAACTCAGTGTGGAATGAGGACCTGATGTTTGTTGCTGCTGAACCCTTTGACGATCATCTGATTGTTTCAGTTGAAGATCGTGTAGGTCCAAGCAAAGATGAGACCTTAGGAAGGGTAGTTATACCATTGAACGCTGTTGAGAGGCGTGCAGATGATCGATTAATCCATGGCCGGTGGTTTAACCTTGAAAAGCACATGTCAGATGCCATGGAGGGGGAGCAACGGAAGAAAGATAAAGAAAAGTTTTCCAGTAGAATCCATCTCCGTGTTTGCCTTGATGGAGGGTACCATGTGCTTGATGAGTCAACTCACTACAGCAGTGACCTTCGACCCACAGCTAAGCAGCTATGGAAGTCACATATTGGTGTGTTGGAGCTTGGAATTCTAAATGCTGAAGGGTTGCACCCAATGAAAACAAGGGATGGGAAGGGTATGTCAGACACATATTGTGTAGCAAAGTATGGGCACAAATGGGTTCGTACTCGAACCATAAATAACAGCCTAAGCCCAAAATACAATGAGCAGTACACATGGGAGGTATATGATCCTGCCACAGTTCTCACTGTTGGGGTTTTTGATAACAGTCAGATTGGTAATATAAACGGCAGCGGCAGGGATTTGAAAATTGGCAAGGTCCGGATTCGAATCTCTACCCTTGAGACTGGCCGTGTCTACACACACAATTACCCATTACTAGTCCTTCATCCTTCAGGTGTCAAAAAGATGGGTGAATTGCATCTTGCAATTAGATTTACGTGCACTTCATTCGTTAACATGATGTTTAAATACTCTAAACCACTTTTGCCAAAGATGCATTATACAAGGCCATTGACTGTGATGCAGCAGGATATGTTACGTCACCAAGCTGTCAACATAGTTGCAGCTCGTGTTAGTCGGGCAGAACCACCTCTAAGGAAGGAAGTAGTTGAATACATGTCTGATGCAGACTCTCATCTTTGGAGCATGAGGCGAAGCAAGGCAAACTTTTTCAGACTGATGTCAGTTTTTTCAGGGTTGCTTGCTGTTGCAAAATGGTTCGGAGAAGTCTCTGCGTGGAAGAACCCCATCACTACCGTGCTAGTACATGTTCTTTTCGTGATGCTTGTGTGCTTCCCCGAATTGATTTTGCCAACTGTTTTCCTATACATGTTTCTGATAGGGATTTGGAACTGGAGGTACCGCCCAAGGTACCCTCCTCATATGAACACAAGGATCTCATATGCAGATGCTGTGCACCCTGATGAGCTTGATGAAGAATTTGACACATTCCCCACATCCCGGAGTTCAGATATAGTTCGAATGAGGTATGATCGCTTGAGGAGTGTTGCTGGAAGGATTCAAACTGTGGTGGGAGATGTTGCAACCCAAGGGGAGCGGCTTCAGGCACTTCTCAATTGGCGCGATCCTCGTGCCACTATTTTATATATTACCTTCTGTCTTGTGGCTTCTATTGTGTTGTACGTGACACCTTTCCAGGTTCTGGTTCTTCTTGGTGGTGTTTACCTCATGAGGCACCCGAGGTTCAGGGGTAAGATGCCATCAGCCCCGGTTAACTTCTTTAGAAGGCTGCCAGCAAGGACAGATAGTATGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

999

Amino Acids

113.61

Weight (kDa)

9.22

Isoelectric Point (pI)

46.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	22 - 80	3e-10	C2 domain
C2	PF00168	260 - 363	5.3e-22	C2 domain
C2	PF00168	424 - 527	9.5e-20	C2 domain
C2	PF00168	589 - 698	1.6e-20	C2 domain
PRT_C	PF08372	843 - 998	2.2e-80	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	974
Acc65I	GGTACC	3 cut(s)	1686, 2577, 2589
AccB1I	GGYRCC	5 cut(s)	749, 1686, 2577, 2589, 2913
AccB7I	CCANNNNNTGG	1 cut(s)	2881
AccBSI	CCGCTC	1 cut(s)	2776
AccI	GTMKAC	1 cut(s)	2073
AccII	CGCG	2 cut(s)	312, 2802
AccIII	TCCGGA	1 cut(s)	2037
AciI	CCGC	5 cut(s)	557, 1324, 2010, 2581, 2776
AclWI	GGATC	6 cut(s)	137, 360, 836, 1940, 2621, 2798
AcoI	YGGCCR	2 cut(s)	1570, 2065
AcsI	RAATTY	2 cut(s)	1782, 2657
AcuI	CTGAAG	4 cut(s)	537, 1815, 2094, 2765
AflIII	ACRYGT	7 cut(s)	310, 424, 468, 1596, 2334, 2485, 2547
AhlI	ACTAGT	1 cut(s)	2095
AjnI	CCWGG	3 cut(s)	730, 1178, 2874
AjuI	GAANNNNNNNTTGG	2 cut(s)	846, 878
AleI	CACNNNNGTG	1 cut(s)	2474
Alw21I	GWGCWC	4 cut(s)	53, 1399, 2162, 2637
Alw26I	GTCTC	7 cut(s)	402, 490, 674, 729, 1496, 2054, 2452
Alw44I	GTGCAC	2 cut(s)	2158, 2633
AlwI	GGATC	6 cut(s)	137, 360, 836, 1940, 2621, 2798
AlwNI	CAGNNNCTG	2 cut(s)	2630, 2881
Ama87I	CYCGRG	2 cut(s)	1392, 2917
Aor13HI	TCCGGA	1 cut(s)	2037
AoxI	GGCC	6 cut(s)	298, 740, 1176, 1570, 2065, 2225
ApaLI	GTGCAC	2 cut(s)	2158, 2633
ApoI	RAATTY	2 cut(s)	1782, 2657
ArsI	GACNNNNNNTTYG	4 cut(s)	458, 490, 1412, 1444
AseI	ATTAAT	1 cut(s)	1562
Asp718I	GGTACC	3 cut(s)	1686, 2577, 2589
AspLEI	GCGC	2 cut(s)	31, 2802
AspS9I	GGNCC	5 cut(s)	1199, 1320, 1420, 1487, 2035
AsuC2I	CCSGG	2 cut(s)	2680, 2948
AsuHPI	GGTGA	4 cut(s)	503, 1248, 2141, 2252
AsuII	TTCGAA	2 cut(s)	2044, 2698
AvaI	CYCGRG	2 cut(s)	1392, 2917
AvaII	GGWCC	5 cut(s)	1199, 1320, 1420, 1487, 2035
AxyI	CCTNAGG	1 cut(s)	1507
BaeGI	GKGCMC	3 cut(s)	1869, 2162, 2637
BanI	GGYRCC	5 cut(s)	749, 1686, 2577, 2589, 2913
BanII	GRGCYC	3 cut(s)	53, 689, 1399
BauI	CACGAG	2 cut(s)	2286, 2808
BbsI	GAAGAC	1 cut(s)	606
Bbv12I	GWGCWC	4 cut(s)	53, 1399, 2162, 2637
BceAI	ACGGC	3 cut(s)	553, 2020, 2052
BcgI	CGANNNNNNTGC	6 cut(s)	911, 945, 2149, 2183, 2792, 2826
BciT130I	CCWGG	3 cut(s)	732, 1180, 2876
BcnI	CCSGG	2 cut(s)	2680, 2948
BcoDI	GTCTC	7 cut(s)	402, 490, 674, 729, 1496, 2054, 2452
BcuI	ACTAGT	1 cut(s)	2095
BfaI	CTAG	3 cut(s)	530, 2096, 2480
BfmI	CTRYAG	1 cut(s)	1714
BglII	AGATCT	1 cut(s)	97
BlpI	GCTNAGC	1 cut(s)	1740
Bme1390I	CCNGG	5 cut(s)	732, 1180, 2680, 2876, 2948
Bme18I	GGWCC	5 cut(s)	1199, 1320, 1420, 1487, 2035
BmeT110I	CYCGRG	2 cut(s)	1392, 2917
BmgT120I	GGNCC	5 cut(s)	1199, 1320, 1420, 1487, 2035
BmiI	GGNNCC	7 cut(s)	751, 1074, 1322, 1688, 2579, 2591, 2915
BmrFI	CCNGG	5 cut(s)	732, 1180, 2680, 2876, 2948
BmrI	ACTGGG	1 cut(s)	246
BmuI	ACTGGG	1 cut(s)	246
BoxI	GACNNNNGTC	1 cut(s)	2398
BpiI	GAAGAC	1 cut(s)	606
BpmI	CTGGAG	4 cut(s)	308, 753, 1059, 2593
Bpu10I	CCTNAGC	1 cut(s)	1904
Bpu1102I	GCTNAGC	1 cut(s)	1740
Bpu14I	TTCGAA	2 cut(s)	2044, 2698
BpuEI	CTTGAG	3 cut(s)	639, 2078, 2737
BpuMI	CCSGG	2 cut(s)	2680, 2948
Bsa29I	ATCGAT	2 cut(s)	63, 1558
BsaAI	YACGTR	2 cut(s)	2157, 2863
BsaBI	GATNNNNATC	2 cut(s)	102, 2045
BsaI	GGTCTC	1 cut(s)	1496
BsaJI	CCNNGG	9 cut(s)	190, 217, 694, 1567, 1608, 2585, 2767, 2918, 2946
BsaWI	WCCGGW	1 cut(s)	2037
BsaXI	ACNNNNNCTCC	2 cut(s)	708, 738
Bse118I	RCCGGY	1 cut(s)	1572
Bse1I	ACTGG	7 cut(s)	35, 241, 393, 1382, 1650, 2068, 2576
Bse21I	CCTNAGG	1 cut(s)	1507
Bse3DI	GCAATG	1 cut(s)	567
Bse8I	GATNNNNATC	2 cut(s)	102, 2045
BseAI	TCCGGA	1 cut(s)	2037
BseBI	CCWGG	3 cut(s)	732, 1180, 2876
BseCI	ATCGAT	2 cut(s)	63, 1558
BseDI	CCNNGG	9 cut(s)	190, 217, 694, 1567, 1608, 2585, 2767, 2918, 2946
BseGI	GGATG	7 cut(s)	397, 591, 1108, 1233, 1828, 2104, 2675
BseJI	GATNNNNATC	2 cut(s)	102, 2045
BseMI	GCAATG	1 cut(s)	567
BseMII	CTCAG	3 cut(s)	178, 654, 1419
BseNI	ACTGG	7 cut(s)	35, 241, 393, 1382, 1650, 2068, 2576
BseRI	GAGGAG	2 cut(s)	2586, 2734
BseSI	GKGCMC	3 cut(s)	1869, 2162, 2637
BsgI	GTGCAG	4 cut(s)	369, 405, 1295, 1569
Bsh1236I	CGCG	2 cut(s)	312, 2802
BshFI	GGCC	6 cut(s)	300, 742, 1178, 1572, 2067, 2227
BshNI	GGYRCC	5 cut(s)	749, 1686, 2577, 2589, 2913
BshVI	ATCGAT	2 cut(s)	63, 1558
BsiHKAI	GWGCWC	4 cut(s)	53, 1399, 2162, 2637
BsiHKCI	CYCGRG	2 cut(s)	1392, 2917
BsiSI	CCGG	4 cut(s)	1573, 2038, 2680, 2948
BslFI	GGGAC	2 cut(s)	253, 1306
BsmAI	GTCTC	7 cut(s)	402, 490, 674, 729, 1496, 2054, 2452
BsmBI	CGTCTC	2 cut(s)	402, 674
BsmFI	GGGAC	2 cut(s)	253, 1306
BsmI	GAATGC	1 cut(s)	1183
BsnI	GGCC	6 cut(s)	300, 742, 1178, 1572, 2067, 2227
Bso31I	GGTCTC	1 cut(s)	1496
BsoBI	CYCGRG	2 cut(s)	1392, 2917
Bsp119I	TTCGAA	2 cut(s)	2044, 2698
Bsp1286I	GDGCHC	6 cut(s)	53, 689, 1399, 1869, 2162, 2637
Bsp13I	TCCGGA	1 cut(s)	2037
Bsp1720I	GCTNAGC	1 cut(s)	1740
Bsp19I	CCATGG	3 cut(s)	190, 1567, 1608
BspACI	CCGC	5 cut(s)	557, 1324, 2010, 2581, 2776
BspANI	GGCC	6 cut(s)	300, 742, 1178, 1572, 2067, 2227
BspCNI	CTCAG	3 cut(s)	177, 653, 1418
BspDI	ATCGAT	2 cut(s)	63, 1558
BspEI	TCCGGA	1 cut(s)	2037
BspFNI	CGCG	2 cut(s)	312, 2802
BspHI	TCATGA	1 cut(s)	2907
BspLI	GGNNCC	7 cut(s)	751, 1074, 1322, 1688, 2579, 2591, 2915
BspPI	GGATC	6 cut(s)	137, 360, 836, 1940, 2621, 2798
BspT104I	TTCGAA	2 cut(s)	2044, 2698
BspT107I	GGYRCC	5 cut(s)	749, 1686, 2577, 2589, 2913
BspTNI	GGTCTC	1 cut(s)	1496
BsrBI	CCGCTC	1 cut(s)	2776
BsrDI	GCAATG	1 cut(s)	567
BsrFI	RCCGGY	1 cut(s)	1572
BsrI	ACTGG	7 cut(s)	35, 241, 393, 1382, 1650, 2068, 2576
BssAI	RCCGGY	1 cut(s)	1572
BssECI	CCNNGG	9 cut(s)	190, 217, 694, 1567, 1608, 2585, 2767, 2918, 2946
BssSI	CACGAG	2 cut(s)	2286, 2808
BssT1I	CCWWGG	6 cut(s)	190, 694, 1567, 1608, 2585, 2767
Bst2BI	CACGAG	2 cut(s)	2286, 2808
Bst2UI	CCWGG	3 cut(s)	732, 1180, 2876
BstAPI	GCANNNNNTGC	2 cut(s)	37, 392
BstBAI	YACGTR	2 cut(s)	2157, 2863
BstBI	TTCGAA	2 cut(s)	2044, 2698
BstC8I	GCNNGC	5 cut(s)	1092, 1134, 1548, 2421, 2973
BstDEI	CTNAG	7 cut(s)	164, 640, 1405, 1507, 1740, 1904, 2312
BstDSI	CCRYGG	3 cut(s)	190, 1567, 1608
BstENI	CCTNNNNNAGG	2 cut(s)	221, 1510
BstF5I	GGATG	7 cut(s)	397, 591, 1108, 1233, 1828, 2104, 2675
BstFNI	CGCG	2 cut(s)	312, 2802
BstHHI	GCGC	2 cut(s)	31, 2802
BstMAI	GTCTC	7 cut(s)	402, 490, 674, 729, 1496, 2054, 2452
BstMWI	GCNNNNNNNGC	4 cut(s)	37, 392, 1163, 2212
BstNI	CCWGG	3 cut(s)	732, 1180, 2876
BstNSI	RCATGY	7 cut(s)	428, 472, 637, 1600, 2338, 2489, 2551
BstPAI	GACNNNNGTC	1 cut(s)	2398
BstSCI	CCNGG	5 cut(s)	730, 1178, 2678, 2874, 2946
BstSFI	CTRYAG	1 cut(s)	1714
BstSLI	GKGCMC	3 cut(s)	1869, 2162, 2637
BstUI	CGCG	2 cut(s)	312, 2802
BstV2I	GAAGAC	1 cut(s)	606
BstX2I	RGATCY	3 cut(s)	97, 365, 2613
BstXI	CCANNNNNNTGG	2 cut(s)	1179, 1266
BstYI	RGATCY	3 cut(s)	97, 365, 2613
Bsu15I	ATCGAT	2 cut(s)	63, 1558
Bsu36I	CCTNAGG	1 cut(s)	1507
BsuRI	GGCC	6 cut(s)	300, 742, 1178, 1572, 2067, 2227
BsuTUI	ATCGAT	2 cut(s)	63, 1558
BtgI	CCRYGG	3 cut(s)	190, 1567, 1608
BtsCI	GGATG	7 cut(s)	397, 591, 1108, 1233, 1828, 2104, 2675
BtsI	GCAGTG	1 cut(s)	1726
BtsIMutI	CAGTG	6 cut(s)	42, 386, 579, 1413, 1726, 1962
Cac8I	GCNNGC	5 cut(s)	1092, 1134, 1548, 2421, 2973
CaiI	CAGNNNCTG	2 cut(s)	2630, 2881
CciI	TCATGA	1 cut(s)	2907
CfoI	GCGC	2 cut(s)	31, 2802
Cfr10I	RCCGGY	1 cut(s)	1572
Cfr13I	GGNCC	5 cut(s)	1199, 1320, 1420, 1487, 2035
ClaI	ATCGAT	2 cut(s)	63, 1558
CseI	GACGC	2 cut(s)	384, 480
DdeI	CTNAG	7 cut(s)	164, 640, 1405, 1507, 1740, 1904, 2312
DraI	TTTAAA	2 cut(s)	1371, 2185
DrdI	GACNNNNNNGTC	1 cut(s)	974
DseDI	GACNNNNNNGTC	1 cut(s)	974
EaeI	YGGCCR	2 cut(s)	1570, 2065
Ecl136II	GAGCTC	2 cut(s)	51, 1397
Eco130I	CCWWGG	6 cut(s)	190, 694, 1567, 1608, 2585, 2767
Eco147I	AGGCCT	2 cut(s)	300, 1178
Eco24I	GRGCYC	3 cut(s)	53, 689, 1399
Eco31I	GGTCTC	1 cut(s)	1496
Eco47I	GGWCC	5 cut(s)	1199, 1320, 1420, 1487, 2035
Eco53kI	GAGCTC	2 cut(s)	51, 1397
Eco57I	CTGAAG	4 cut(s)	537, 1815, 2094, 2765
Eco81I	CCTNAGG	1 cut(s)	1507
Eco88I	CYCGRG	2 cut(s)	1392, 2917
EcoICRI	GAGCTC	2 cut(s)	51, 1397
EcoNI	CCTNNNNNAGG	2 cut(s)	221, 1510
EcoO109I	RGGNCCY	2 cut(s)	1320, 1420
EcoRI	GAATTC	1 cut(s)	1782
EcoRII	CCWGG	3 cut(s)	730, 1178, 2874
EcoT14I	CCWWGG	6 cut(s)	190, 694, 1567, 1608, 2585, 2767
EcoT22I	ATGCAT	2 cut(s)	1339, 2217
EcoT38I	GRGCYC	3 cut(s)	53, 689, 1399
ErhI	CCWWGG	6 cut(s)	190, 694, 1567, 1608, 2585, 2767
Esp3I	CGTCTC	2 cut(s)	402, 674
FalI	AAGNNNNNCTT	4 cut(s)	309, 341, 2369, 2401
FaqI	GGGAC	2 cut(s)	253, 1306
FauI	CCCGC	1 cut(s)	1331
FauNDI	CATATG	4 cut(s)	847, 1339, 2601, 2620
FblI	GTMKAC	1 cut(s)	2073
FokI	GGATG	7 cut(s)	404, 598, 1115, 1220, 1835, 2091, 2662
FriOI	GRGCYC	3 cut(s)	53, 689, 1399
FspBI	CTAG	3 cut(s)	530, 2096, 2480
GlaI	GCGC	2 cut(s)	30, 2801
GsuI	CTGGAG	4 cut(s)	308, 753, 1059, 2593
HaeIII	GGCC	6 cut(s)	300, 742, 1178, 1572, 2067, 2227
HapII	CCGG	4 cut(s)	1573, 2038, 2680, 2948
HgaI	GACGC	2 cut(s)	384, 480
HhaI	GCGC	2 cut(s)	31, 2802
Hin6I	GCGC	2 cut(s)	29, 2800
HinP1I	GCGC	2 cut(s)	29, 2800
HincII	GTYRAC	5 cut(s)	460, 1707, 2173, 2272, 2953
HindII	GTYRAC	5 cut(s)	460, 1707, 2173, 2272, 2953
HinfI	GANTC	9 cut(s)	410, 723, 988, 1656, 1703, 2041, 2046, 2348, 2737
HpaI	GTTAAC	3 cut(s)	460, 2173, 2953
HpaII	CCGG	4 cut(s)	1573, 2038, 2680, 2948
HphI	GGTGA	4 cut(s)	503, 1248, 2141, 2252
Hpy99I	CGWCG	1 cut(s)	496
HpyCH4IV	ACGT	4 cut(s)	969, 2156, 2257, 2862
HpyF10VI	GCNNNNNNNGC	4 cut(s)	37, 392, 1163, 2212
HpyF3I	CTNAG	7 cut(s)	164, 640, 1405, 1507, 1740, 1904, 2312
HpySE526I	ACGT	4 cut(s)	969, 2156, 2257, 2862
HspAI	GCGC	2 cut(s)	29, 2800
Kpn2I	TCCGGA	1 cut(s)	2037
KpnI	GGTACC	3 cut(s)	1690, 2581, 2593
KspAI	GTTAAC	3 cut(s)	460, 2173, 2953
LmnI	GCTCC	7 cut(s)	48, 56, 1078, 1618, 1774, 2361, 2773
MaeI	CTAG	3 cut(s)	530, 2096, 2480
MaeII	ACGT	4 cut(s)	969, 2156, 2257, 2862
MaeIII	GTNAC	8 cut(s)	343, 806, 866, 1721, 1755, 2253, 2258, 2863
MbiI	CCGCTC	1 cut(s)	2776
MboII	GAAGA	8 cut(s)	543, 606, 1206, 1487, 1639, 2470, 2666, 2879
MfeI	CAATTG	2 cut(s)	1194, 2794
MflI	RGATCY	3 cut(s)	97, 365, 2613
MhlI	GDGCHC	6 cut(s)	53, 689, 1399, 1869, 2162, 2637
MluI	ACGCGT	1 cut(s)	310
MlyI	GAGTC	3 cut(s)	732, 1712, 2342
MmeI	TCCRAC	2 cut(s)	694, 1752
Mph1103I	ATGCAT	2 cut(s)	1339, 2217
MroI	TCCGGA	1 cut(s)	2037
MseI	TTAA	9 cut(s)	315, 459, 675, 1370, 1562, 1581, 2172, 2184, 2952
MslI	CAYNNNNRTG	5 cut(s)	1188, 1665, 1764, 2474, 2640
MspA1I	CMGCKG	2 cut(s)	557, 2010
MspI	CCGG	4 cut(s)	1573, 2038, 2680, 2948
MspR9I	CCNGG	5 cut(s)	732, 1180, 2680, 2876, 2948
MunI	CAATTG	2 cut(s)	1194, 2794
Mva1269I	GAATGC	1 cut(s)	1183
MvaI	CCWGG	3 cut(s)	732, 1180, 2876
MvnI	CGCG	2 cut(s)	312, 2802
MwoI	GCNNNNNNNGC	4 cut(s)	37, 392, 1163, 2212
NciI	CCSGG	2 cut(s)	2680, 2948
NcoI	CCATGG	3 cut(s)	190, 1567, 1608
NdeI	CATATG	4 cut(s)	847, 1339, 2601, 2620
NlaIV	GGNNCC	7 cut(s)	751, 1074, 1322, 1688, 2579, 2591, 2915
NmuCI	GTSAC	5 cut(s)	806, 1721, 1755, 2258, 2863
NsiI	ATGCAT	2 cut(s)	1339, 2217
NspI	RCATGY	7 cut(s)	428, 472, 637, 1600, 2338, 2489, 2551
NspV	TTCGAA	2 cut(s)	2044, 2698
OliI	CACNNNNGTG	1 cut(s)	2474
PaeR7I	CTCGAG	1 cut(s)	1392
PagI	TCATGA	1 cut(s)	2907
PceI	AGGCCT	2 cut(s)	300, 1178
PciI	ACATGT	6 cut(s)	424, 468, 1596, 2334, 2485, 2547
PctI	GAATGC	1 cut(s)	1183
PfeI	GAWTC	6 cut(s)	410, 988, 1656, 2041, 2046, 2737
PflMI	CCANNNNNTGG	1 cut(s)	2881
PfoI	TCCNGGA	1 cut(s)	2678
PleI	GAGTC	3 cut(s)	731, 1711, 2342
PpsI	GAGTC	3 cut(s)	731, 1711, 2342
Ppu21I	YACGTR	2 cut(s)	2157, 2863
PpuMI	RGGWCCY	2 cut(s)	1320, 1420
PscI	ACATGT	6 cut(s)	424, 468, 1596, 2334, 2485, 2547
PshAI	GACNNNNGTC	1 cut(s)	2398
PshBI	ATTAAT	1 cut(s)	1562
Psp124BI	GAGCTC	2 cut(s)	53, 1399
Psp5II	RGGWCCY	2 cut(s)	1320, 1420
Psp6I	CCWGG	3 cut(s)	730, 1178, 2874
PspGI	CCWGG	3 cut(s)	730, 1178, 2874
PspN4I	GGNNCC	7 cut(s)	751, 1074, 1322, 1688, 2579, 2591, 2915
PspPI	GGNCC	5 cut(s)	1199, 1320, 1420, 1487, 2035
PspPPI	RGGWCCY	2 cut(s)	1320, 1420
PsrI	GAACNNNNNNTAC	2 cut(s)	2561, 2593
PstNI	CAGNNNCTG	2 cut(s)	2630, 2881
PsuI	RGATCY	3 cut(s)	97, 365, 2613
RseI	CAYNNNNRTG	5 cut(s)	1188, 1665, 1764, 2474, 2640
SacI	GAGCTC	2 cut(s)	53, 1399
SaqAI	TTAA	9 cut(s)	315, 459, 675, 1370, 1562, 1581, 2172, 2184, 2952
Sau96I	GGNCC	5 cut(s)	1199, 1320, 1420, 1487, 2035
SchI	GAGTC	3 cut(s)	732, 1712, 2342
ScrFI	CCNGG	5 cut(s)	732, 1180, 2680, 2876, 2948
SduI	GDGCHC	6 cut(s)	53, 689, 1399, 1869, 2162, 2637
SfcI	CTRYAG	1 cut(s)	1714
Sfr274I	CTCGAG	1 cut(s)	1392
SfuI	TTCGAA	2 cut(s)	2044, 2698
SinI	GGWCC	5 cut(s)	1199, 1320, 1420, 1487, 2035
SlaI	CTCGAG	1 cut(s)	1392
SmiMI	CAYNNNNRTG	5 cut(s)	1188, 1665, 1764, 2474, 2640
SmlI	CTYRAG	4 cut(s)	654, 1392, 2057, 2716
SmoI	CTYRAG	4 cut(s)	654, 1392, 2057, 2716
SpeI	ACTAGT	1 cut(s)	2095
SseBI	AGGCCT	2 cut(s)	300, 1178
SsiI	CCGC	5 cut(s)	557, 1324, 2010, 2581, 2776
SspI	AATATT	1 cut(s)	547
SspMI	CTAG	3 cut(s)	530, 2096, 2480
SstI	GAGCTC	2 cut(s)	53, 1399
StuI	AGGCCT	2 cut(s)	300, 1178
StyD4I	CCNGG	5 cut(s)	730, 1178, 2678, 2874, 2946
StyI	CCWWGG	6 cut(s)	190, 694, 1567, 1608, 2585, 2767
TaiI	ACGT	4 cut(s)	972, 2159, 2260, 2865
TatI	WGTACW	4 cut(s)	636, 1348, 1926, 2482
TauI	GCSGC	3 cut(s)	560, 2013, 2779
TfiI	GAWTC	6 cut(s)	410, 988, 1656, 2041, 2046, 2737
Tru1I	TTAA	9 cut(s)	315, 459, 675, 1370, 1562, 1581, 2172, 2184, 2952
Tru9I	TTAA	9 cut(s)	315, 459, 675, 1370, 1562, 1581, 2172, 2184, 2952
TscAI	CASTG	6 cut(s)	42, 393, 579, 1413, 1726, 1969
TseFI	GTSAC	5 cut(s)	806, 1721, 1755, 2258, 2863
Tsp45I	GTSAC	5 cut(s)	806, 1721, 1755, 2258, 2863
TspDTI	ATGAA	8 cut(s)	497, 636, 1050, 1826, 2093, 2154, 2618, 2667
TspGWI	ACGGA	3 cut(s)	1226, 1639, 1655
TspRI	CASTG	6 cut(s)	42, 393, 579, 1413, 1726, 1969
Van91I	CCANNNNNTGG	1 cut(s)	2881
VneI	GTGCAC	2 cut(s)	2158, 2633
VpaK11BI	GGWCC	5 cut(s)	1199, 1320, 1420, 1487, 2035
VspI	ATTAAT	1 cut(s)	1562
XagI	CCTNNNNNAGG	2 cut(s)	221, 1510
XapI	RAATTY	2 cut(s)	1782, 2657
XceI	RCATGY	7 cut(s)	428, 472, 637, 1600, 2338, 2489, 2551
XcmI	CCANNNNNNNNNTGG	1 cut(s)	42
XhoI	CTCGAG	1 cut(s)	1392
XmiI	GTMKAC	1 cut(s)	2073
XspI	CTAG	3 cut(s)	530, 2096, 2480
Zsp2I	ATGCAT	2 cut(s)	1339, 2217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.