Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Reverse (-)

20305963 .. 20310851

Gene Structure 4889 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1139900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3030 bp

ATGAACTTTAAGTTAGGGGTGGAGGTTGTGGCTGCCCATGACCTTATGCCCAAAGATGGGCAGGGCGCTGCCAACGCATTTGTGGAGCTCCACTTTGATCATCAGAGATTCCGAACCACCATAAAAGAAAAAGATCTCAATCCCGTTTGGAACGAGAGCTTCTACTTCAACATCTCTGATCCAAACGATCTCTCTAACCTCAGTCTTGAAGCCTATATATATCACCATGGTAAGGGCAACTCCAATTCTTTCCTCGGAAAGGTTTGTCTTACTGGGACATCATTTGTTCCATATTCTGATGCTGTTGTTTTGCACTACCCTCTGGAGAAGCGAGGCCTTTTCTCACGCGTTAAGGGAGAGCTTGGTCTAAAAGTTTTTGTTACCGATGACCCGTCTATAAGATCCTCAAATCCACTTCCTGCACTGGATTCACCTCTGGACAGAGATTCACGCTCTGCACGTGTTCTATTACAATCGCCACAAGTTCCAAATGTTATCTCAAACATGATGTCCAATGGAAAATCTGAGTCGAGACGTACATTTCACCACCTTCCAAACCCCAACGTAGCACAGCAGCAGAATATTCCTTCAGCACCAATGCAGTCGTCAGTGAACTATGGGATGCAGGAAATGAGGTCTCAACCACAGCCTCCAGTTGTTCGCAGCACGTACCCAGGTTCATCAGCTCAAGCTCCTGATTATTCCCTTAAAGAGACAAGTCCTTACCTTGGAGGGGGGCGAATTGTTGGAGGGCGAGTCATACCTGGAGACAGGCCATCCGGCACCTATGACCTTGTTGAAAAGATGGAGTACCTGTTTGTACGAGTTGTGAAAGCCCGTGACCTCCCTCACATGGATATAACAGGTAGCCTTGACCCATATGTTGAAGTAAGAGTTGGGAACTTCAAAGGAATTACAAGGCATTTTGAGAAAAGGCAGAACCCTGAATGGAACCAGGTATTTGCTTTTGCAAAGGATAATCAGCAATCATCTGTTTTGGACGTTGTAGTCAAAGACAAGGATCTTTTGAAAGATGACTTTGTTGGGTTTGTGCGGTTTGAGATCCTTGAAGTTCCTCGTCGATTTCCACCAGACAGCCCATTGGCTCCAGAATGGTATCGGCTTGCAGATAAGGATGGGAAGAAGGACAAAGGAGAGCTGATGCTTGCTGTATGGATTGGCACACAAGCTGATGAGGCTTTTCCAGAGGCCTGGCATTCTGATGCAATTGGTCCTGATGATGGTTCTTTGGTTGCTTATGGACACATCCGTTCAAAAGTTTACCATTCACCAAGACTATGGTATGTTCGAGTAAATGTGATTGAGGCACAGGACTTGGTTCTATCTGACAGGTCCCGCTTTCCAGATGCATATGCAAAAGTACAGATCGGTAATCAGGTTTTAAAGACAAAACCAGTTCAATCTCGAGCTATGAACCCAATGTGGAACGAGGACCTAATGTTTGTTGCTGCTGAACCCTTTGACGATCATCTGATCATTTCAGTTGAAGATCGCGTAGGTCCAAGCAAAGATGAGATCCTAGGAAGGGTTGTTATACCATTGAACGCTGTTGAGAGGCGTGCTGATGATCGATTAATTCGTGGCCGGTGGTTTAACCTTGAAAAGCATATGTCAGATGCCATGGAGGGGGAACAGCGGAAGAAAGATAAAGATAAGTTTTCCAGTAGAATCCATCTCCGTGTTTGCCTTGATGGAGGGTACCATGTGCTTGATGAGTCAACTCACTACAGCAGCGACCTTCGACCTACAGCTAAGCAGCTATGGAAGTCACATATTGGTATGTTGGAGCTCGGAATTCTAAATGCTGAAGGGCTACACCCAATGAAAACAAGGGATGGGAAGGGTGTATCAGACACATATTGTGTAGCAAAGTATGGGCAAAAATGGGTTCGTACTCGAACTATAAATAACAGCCTGAGCCCAAAATACAATGAGCAGTACACTTGGGAGGTTTATGATCCTGCCACGGTTCTCACTGTGGGGGTTTTTGATAACAGTCAGATTGGTAATACAAATGGCAGTGGCAGGGATGTGAAAATTGGCAAGGTCCGGATTCGAATCTCTACCCTTGAGACTGGCCGTGTCTACACACACAATTACCCATTACTAGTTCTTCATCCTTCAGGTGTAAAAAAGATGGGTGAATTGCATCTTGCAATCAGATTTTCATGCACATCATTCGTTAACATGATGTTTAAATACTCGAAACCCCTTTTGCCAAAGATGCATTATGCAAGGCCATTGAGTGTGATTCAGCAAGATATGTTACGTCATCAAGCTGTCAACATAGTGGCAGCTCGTCTTAGTCGGGCAGAACCACCTCTCAGGAAGGAAGTAGTAGAATACATGTCGGATGCAGACTCTCATCTTTGGAGCATGAGGCGCAGCAAGGCAAACTTTTTCAGACTGATGGCAGTTTTTTCAGGGTTGTTTGCTGTTGCAAAATGGTTTGGAGAAGTCTGCAAATGGAAAAACCCCATCACAACAGTACTAGTACATGTTCTGTTCATGATGCTCGTGTGTTTCCCAGAACTGATTTTACCAACTGTGTTCCTATACATGTTTCTGATAGGGATTTGGAACTGGAGGTACCGCCCAAGGTACCCTCCTCACATGAACACAAGAATCTCATATGCAGATGCTGTGCACCCTGACGAGCTTGATGAGGAATTTGACACATTCCCAACATCACGGGGTTCAGATATAGTTCGAATGAGGTATGACCGCTTGAGGAGTGTTGCTGGAAGAATTCAAACCGTGGTGGGTGATGTTGCAACCCAAGGGGAGAGGCTTCAGGCACTTCTCAGTTGGCGTGATCCTCGTGCCACTACTTTATATATTACTTTCTGTCTCGTGGCTGCTATTGTGTTGTACGTGACCCCTTTCCAGGTCCTGGTTCTTCTCGGTGGCATTTACCTCATGAGGCACCCGAGGTTCAGGGGTAAGATGCCATCAGCCCCGATTAACTTCTTCAGAAGGCTGCCAGCAAGAACGGATAGTATGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1010

Amino Acids

114.96

Weight (kDa)

9.21

Isoelectric Point (pI)

44.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	4 - 92	3.9e-19	C2 domain
C2	PF00168	271 - 374	4.7e-20	C2 domain
C2	PF00168	435 - 538	7.5e-21	C2 domain
C2	PF00168	601 - 709	1.4e-20	C2 domain
PRT_C	PF08372	854 - 1009	5.2e-81	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1007
Acc65I	GGTACC	3 cut(s)	1719, 2610, 2622
AccB1I	GGYRCC	5 cut(s)	782, 1719, 2610, 2622, 2946
AccB7I	CCANNNNNTGG	1 cut(s)	2914
AccI	GTMKAC	1 cut(s)	2106
AccII	CGCG	2 cut(s)	348, 1515
AccIII	TCCGGA	1 cut(s)	2070
AciI	CCGC	5 cut(s)	1054, 1357, 1657, 2614, 2746
AclWI	GGATC	7 cut(s)	173, 396, 1029, 1057, 1531, 1973, 2831
AcoI	YGGCCR	2 cut(s)	1603, 2098
AcsI	RAATTY	3 cut(s)	1815, 2690, 2769
AcuI	CTGAAG	5 cut(s)	573, 1848, 2127, 2798, 2977
AcvI	CACGTG	1 cut(s)	461
AflIII	ACRYGT	5 cut(s)	346, 460, 2367, 2518, 2580
AhlI	ACTAGT	2 cut(s)	2128, 2512
AjnI	CCWGG	6 cut(s)	673, 763, 954, 1211, 2907, 2913
AjuI	GAANNNNNNNTTGG	2 cut(s)	879, 911
Alw21I	GWGCWC	3 cut(s)	90, 1812, 2670
Alw26I	GTCTC	6 cut(s)	526, 642, 707, 762, 2087, 2876
Alw44I	GTGCAC	1 cut(s)	2666
AlwI	GGATC	7 cut(s)	173, 396, 1029, 1057, 1531, 1973, 2831
AlwNI	CAGNNNCTG	2 cut(s)	2663, 2914
Ama87I	CYCGRG	2 cut(s)	1425, 2950
Aor13HI	TCCGGA	1 cut(s)	2070
AoxI	GGCC	6 cut(s)	334, 773, 1209, 1603, 2098, 2258
ApaLI	GTGCAC	1 cut(s)	2666
ApoI	RAATTY	3 cut(s)	1815, 2690, 2769
ArsI	GACNNNNNNTTYG	4 cut(s)	494, 526, 1445, 1477
AseI	ATTAAT	1 cut(s)	1595
Asp718I	GGTACC	3 cut(s)	1719, 2610, 2622
AspA2I	CCTAGG	1 cut(s)	1540
AspLEI	GCGC	2 cut(s)	68, 2406
AspS9I	GGNCC	6 cut(s)	1232, 1353, 1453, 1520, 2068, 2911
AsuHPI	GGTGA	6 cut(s)	215, 423, 536, 1281, 2174, 2798
AsuII	TTCGAA	2 cut(s)	2077, 2731
AvaI	CYCGRG	2 cut(s)	1425, 2950
AvaII	GGWCC	6 cut(s)	1232, 1353, 1453, 1520, 2068, 2911
AvrII	CCTAGG	1 cut(s)	1540
BaeGI	GKGCMC	1 cut(s)	2670
BanI	GGYRCC	5 cut(s)	782, 1719, 2610, 2622, 2946
BanII	GRGCYC	3 cut(s)	90, 1812, 1943
BauI	CACGAG	3 cut(s)	2537, 2841, 2873
BbrPI	CACGTG	1 cut(s)	461
Bbv12I	GWGCWC	3 cut(s)	90, 1812, 2670
BceAI	ACGGC	1 cut(s)	2085
BcgI	CGANNNNNNTGC	2 cut(s)	2182, 2216
BciT130I	CCWGG	6 cut(s)	675, 765, 956, 1213, 2909, 2915
BclI	TGATCA	2 cut(s)	97, 1494
BcoDI	GTCTC	6 cut(s)	526, 642, 707, 762, 2087, 2876
BcuI	ACTAGT	2 cut(s)	2128, 2512
BfaI	CTAG	3 cut(s)	1541, 2129, 2513
BfmI	CTRYAG	2 cut(s)	1747, 1767
BfoI	RGCGCY	1 cut(s)	69
BglII	AGATCT	1 cut(s)	133
BlnI	CCTAGG	1 cut(s)	1540
BlpI	GCTNAGC	1 cut(s)	1773
BmcAI	AGTACT	1 cut(s)	2511
Bme1390I	CCNGG	6 cut(s)	675, 765, 956, 1213, 2909, 2915
Bme18I	GGWCC	6 cut(s)	1232, 1353, 1453, 1520, 2068, 2911
BmeT110I	CYCGRG	2 cut(s)	1425, 2950
BmgT120I	GGNCC	6 cut(s)	1232, 1353, 1453, 1520, 2068, 2911
BmiI	GGNNCC	8 cut(s)	784, 953, 1107, 1355, 1721, 2612, 2624, 2948
BmrFI	CCNGG	6 cut(s)	675, 765, 956, 1213, 2909, 2915
BmrI	ACTGGG	1 cut(s)	282
BmuI	ACTGGG	1 cut(s)	282
BpmI	CTGGAG	5 cut(s)	344, 636, 786, 1092, 2626
Bpu10I	CCTNAGC	1 cut(s)	1937
Bpu1102I	GCTNAGC	1 cut(s)	1773
Bpu14I	TTCGAA	2 cut(s)	2077, 2731
BpuEI	CTTGAG	3 cut(s)	672, 2111, 2770
Bsa29I	ATCGAT	1 cut(s)	1591
BsaAI	YACGTR	3 cut(s)	461, 669, 2896
BsaBI	GATNNNNATC	2 cut(s)	138, 2078
BsaI	GGTCTC	1 cut(s)	642
BsaWI	WCCGGW	1 cut(s)	2070
BsaXI	ACNNNNNCTCC	4 cut(s)	741, 771, 800, 830
Bse118I	RCCGGY	1 cut(s)	1605
Bse1I	ACTGG	7 cut(s)	277, 429, 653, 1415, 1683, 2101, 2609
Bse8I	GATNNNNATC	2 cut(s)	138, 2078
BseAI	TCCGGA	1 cut(s)	2070
BseBI	CCWGG	6 cut(s)	675, 765, 956, 1213, 2909, 2915
BseCI	ATCGAT	1 cut(s)	1591
BseGI	GGATG	8 cut(s)	627, 776, 1141, 1266, 1861, 2056, 2137, 2380
BseJI	GATNNNNATC	2 cut(s)	138, 2078
BseMII	CTCAG	5 cut(s)	214, 516, 1928, 2359, 2839
BseNI	ACTGG	7 cut(s)	277, 429, 653, 1415, 1683, 2101, 2609
BseRI	GAGGAG	2 cut(s)	2619, 2767
BseSI	GKGCMC	1 cut(s)	2670
BsgI	GTGCAG	2 cut(s)	405, 441
Bsh1236I	CGCG	2 cut(s)	348, 1515
BshFI	GGCC	6 cut(s)	336, 775, 1211, 1605, 2100, 2260
BshNI	GGYRCC	5 cut(s)	782, 1719, 2610, 2622, 2946
BshVI	ATCGAT	1 cut(s)	1591
BsiHKAI	GWGCWC	3 cut(s)	90, 1812, 2670
BsiHKCI	CYCGRG	2 cut(s)	1425, 2950
BsiSI	CCGG	3 cut(s)	780, 1606, 2071
BslFI	GGGAC	2 cut(s)	289, 1339
BsmAI	GTCTC	6 cut(s)	526, 642, 707, 762, 2087, 2876
BsmBI	CGTCTC	1 cut(s)	526
BsmFI	GGGAC	2 cut(s)	289, 1339
BsmI	GAATGC	1 cut(s)	1216
BsnI	GGCC	6 cut(s)	336, 775, 1211, 1605, 2100, 2260
Bso31I	GGTCTC	1 cut(s)	642
BsoBI	CYCGRG	2 cut(s)	1425, 2950
Bsp119I	TTCGAA	2 cut(s)	2077, 2731
Bsp1286I	GDGCHC	4 cut(s)	90, 1812, 1943, 2670
Bsp13I	TCCGGA	1 cut(s)	2070
Bsp1720I	GCTNAGC	1 cut(s)	1773
Bsp19I	CCATGG	2 cut(s)	226, 1641
BspACI	CCGC	5 cut(s)	1054, 1357, 1657, 2614, 2746
BspANI	GGCC	6 cut(s)	336, 775, 1211, 1605, 2100, 2260
BspCNI	CTCAG	5 cut(s)	213, 517, 1929, 2358, 2838
BspDI	ATCGAT	1 cut(s)	1591
BspEI	TCCGGA	1 cut(s)	2070
BspFNI	CGCG	2 cut(s)	348, 1515
BspHI	TCATGA	2 cut(s)	2529, 2940
BspLI	GGNNCC	8 cut(s)	784, 953, 1107, 1355, 1721, 2612, 2624, 2948
BspPI	GGATC	7 cut(s)	173, 396, 1029, 1057, 1531, 1973, 2831
BspT104I	TTCGAA	2 cut(s)	2077, 2731
BspT107I	GGYRCC	5 cut(s)	782, 1719, 2610, 2622, 2946
BspTNI	GGTCTC	1 cut(s)	642
BsrFI	RCCGGY	1 cut(s)	1605
BsrI	ACTGG	7 cut(s)	277, 429, 653, 1415, 1683, 2101, 2609
BssAI	RCCGGY	1 cut(s)	1605
BssSI	CACGAG	3 cut(s)	2537, 2841, 2873
BssT1I	CCWWGG	6 cut(s)	226, 727, 1540, 1641, 2618, 2800
Bst2BI	CACGAG	3 cut(s)	2537, 2841, 2873
Bst2UI	CCWGG	6 cut(s)	675, 765, 956, 1213, 2909, 2915
Bst4CI	ACNGT	6 cut(s)	1990, 1999, 2018, 2509, 2569, 2779
BstBAI	YACGTR	3 cut(s)	461, 669, 2896
BstBI	TTCGAA	2 cut(s)	2077, 2731
BstC8I	GCNNGC	4 cut(s)	1125, 1167, 1581, 3006
BstDEI	CTNAG	7 cut(s)	200, 525, 1773, 1937, 2324, 2345, 2825
BstDSI	CCRYGG	4 cut(s)	226, 1641, 1986, 2778
BstENI	CCTNNNNNAGG	1 cut(s)	257
BstF5I	GGATG	8 cut(s)	627, 776, 1141, 1266, 1861, 2056, 2137, 2380
BstFNI	CGCG	2 cut(s)	348, 1515
BstH2I	RGCGCY	1 cut(s)	69
BstHHI	GCGC	2 cut(s)	68, 2406
BstMAI	GTCTC	6 cut(s)	526, 642, 707, 762, 2087, 2876
BstMWI	GCNNNNNNNGC	4 cut(s)	74, 1196, 2245, 2403
BstNI	CCWGG	6 cut(s)	675, 765, 956, 1213, 2909, 2915
BstNSI	RCATGY	3 cut(s)	2371, 2522, 2584
BstSCI	CCNGG	6 cut(s)	673, 763, 954, 1211, 2907, 2913
BstSFI	CTRYAG	2 cut(s)	1747, 1767
BstSLI	GKGCMC	1 cut(s)	2670
BstUI	CGCG	2 cut(s)	348, 1515
BstX2I	RGATCY	5 cut(s)	133, 401, 1021, 1062, 1536
BstXI	CCANNNNNNTGG	2 cut(s)	1212, 1299
BstYI	RGATCY	5 cut(s)	133, 401, 1021, 1062, 1536
Bsu15I	ATCGAT	1 cut(s)	1591
BsuRI	GGCC	6 cut(s)	336, 775, 1211, 1605, 2100, 2260
BsuTUI	ATCGAT	1 cut(s)	1591
BtgI	CCRYGG	4 cut(s)	226, 1641, 1986, 2778
BtsCI	GGATG	8 cut(s)	627, 776, 1141, 1266, 1861, 2056, 2137, 2380
BtsI	GCAGTG	1 cut(s)	2047
BtsIMutI	CAGTG	4 cut(s)	422, 615, 1995, 2047
Cac8I	GCNNGC	4 cut(s)	1125, 1167, 1581, 3006
CaiI	CAGNNNCTG	2 cut(s)	2663, 2914
CciI	TCATGA	2 cut(s)	2529, 2940
CfoI	GCGC	2 cut(s)	68, 2406
Cfr10I	RCCGGY	1 cut(s)	1605
Cfr13I	GGNCC	6 cut(s)	1232, 1353, 1453, 1520, 2068, 2911
ClaI	ATCGAT	1 cut(s)	1591
CsiI	ACCWGGT	1 cut(s)	954
DdeI	CTNAG	7 cut(s)	200, 525, 1773, 1937, 2324, 2345, 2825
DraI	TTTAAA	2 cut(s)	1404, 2218
DrdI	GACNNNNNNGTC	1 cut(s)	1007
DseDI	GACNNNNNNGTC	1 cut(s)	1007
EaeI	YGGCCR	2 cut(s)	1603, 2098
Ecl136II	GAGCTC	2 cut(s)	88, 1810
Eco130I	CCWWGG	6 cut(s)	226, 727, 1540, 1641, 2618, 2800
Eco147I	AGGCCT	2 cut(s)	336, 1211
Eco24I	GRGCYC	3 cut(s)	90, 1812, 1943
Eco31I	GGTCTC	1 cut(s)	642
Eco47I	GGWCC	6 cut(s)	1232, 1353, 1453, 1520, 2068, 2911
Eco53kI	GAGCTC	2 cut(s)	88, 1810
Eco57I	CTGAAG	5 cut(s)	573, 1848, 2127, 2798, 2977
Eco72I	CACGTG	1 cut(s)	461
Eco88I	CYCGRG	2 cut(s)	1425, 2950
EcoICRI	GAGCTC	2 cut(s)	88, 1810
EcoNI	CCTNNNNNAGG	1 cut(s)	257
EcoO109I	RGGNCCY	3 cut(s)	1353, 1453, 2911
EcoRI	GAATTC	2 cut(s)	1815, 2769
EcoRII	CCWGG	6 cut(s)	673, 763, 954, 1211, 2907, 2913
EcoT14I	CCWWGG	6 cut(s)	226, 727, 1540, 1641, 2618, 2800
EcoT22I	ATGCAT	2 cut(s)	1372, 2250
EcoT38I	GRGCYC	3 cut(s)	90, 1812, 1943
ErhI	CCWWGG	6 cut(s)	226, 727, 1540, 1641, 2618, 2800
Esp3I	CGTCTC	1 cut(s)	526
FalI	AAGNNNNNCTT	2 cut(s)	2402, 2434
FaqI	GGGAC	2 cut(s)	289, 1339
FauI	CCCGC	1 cut(s)	1364
FauNDI	CATATG	4 cut(s)	880, 1372, 1629, 2653
FbaI	TGATCA	2 cut(s)	97, 1494
FblI	GTMKAC	1 cut(s)	2106
FokI	GGATG	8 cut(s)	634, 763, 1148, 1253, 1868, 2063, 2124, 2387
FriOI	GRGCYC	3 cut(s)	90, 1812, 1943
FspBI	CTAG	3 cut(s)	1541, 2129, 2513
GlaI	GCGC	2 cut(s)	67, 2405
GsuI	CTGGAG	5 cut(s)	344, 636, 786, 1092, 2626
HaeII	RGCGCY	1 cut(s)	69
HaeIII	GGCC	6 cut(s)	336, 775, 1211, 1605, 2100, 2260
HapII	CCGG	3 cut(s)	780, 1606, 2071
HhaI	GCGC	2 cut(s)	68, 2406
Hin6I	GCGC	2 cut(s)	66, 2404
HinP1I	GCGC	2 cut(s)	66, 2404
HincII	GTYRAC	3 cut(s)	1740, 2206, 2305
HindII	GTYRAC	3 cut(s)	1740, 2206, 2305
HpaI	GTTAAC	1 cut(s)	2206
HpaII	CCGG	3 cut(s)	780, 1606, 2071
HphI	GGTGA	6 cut(s)	215, 423, 536, 1281, 2174, 2798
Hpy166II	GTNNAC	8 cut(s)	613, 1282, 1740, 1962, 2107, 2206, 2305, 2668
Hpy8I	GTNNAC	8 cut(s)	613, 1282, 1740, 1962, 2107, 2206, 2305, 2668
Hpy99I	CGWCG	1 cut(s)	1083
HpyCH4III	ACNGT	6 cut(s)	1990, 1999, 2018, 2509, 2569, 2779
HpyCH4IV	ACGT	7 cut(s)	460, 535, 564, 668, 1002, 2290, 2895
HpyF10VI	GCNNNNNNNGC	4 cut(s)	74, 1196, 2245, 2403
HpyF3I	CTNAG	7 cut(s)	200, 525, 1773, 1937, 2324, 2345, 2825
HpySE526I	ACGT	7 cut(s)	460, 535, 564, 668, 1002, 2290, 2895
HspAI	GCGC	2 cut(s)	66, 2404
Kpn2I	TCCGGA	1 cut(s)	2070
KpnI	GGTACC	3 cut(s)	1723, 2614, 2626
Ksp22I	TGATCA	2 cut(s)	97, 1494
KspAI	GTTAAC	1 cut(s)	2206
LmnI	GCTCC	6 cut(s)	85, 93, 697, 1111, 1807, 2394
MabI	ACCWGGT	1 cut(s)	954
MaeI	CTAG	3 cut(s)	1541, 2129, 2513
MaeII	ACGT	7 cut(s)	460, 535, 564, 668, 1002, 2290, 2895
MaeIII	GTNAC	5 cut(s)	379, 839, 1788, 2286, 2896
MboII	GAAGA	7 cut(s)	1153, 1520, 1672, 2126, 2778, 2912, 2983
MfeI	CAATTG	1 cut(s)	1227
MflI	RGATCY	5 cut(s)	133, 401, 1021, 1062, 1536
MhlI	GDGCHC	4 cut(s)	90, 1812, 1943, 2670
MluI	ACGCGT	1 cut(s)	346
MlyI	GAGTC	4 cut(s)	536, 765, 1745, 2375
MmeI	TCCRAC	3 cut(s)	727, 1785, 2352
Mph1103I	ATGCAT	2 cut(s)	1372, 2250
MroI	TCCGGA	1 cut(s)	2070
MseI	TTAA	9 cut(s)	9, 351, 708, 1403, 1595, 1614, 2205, 2217, 2985
MslI	CAYNNNNRTG	2 cut(s)	1221, 1698
MspA1I	CMGCKG	1 cut(s)	1657
MspI	CCGG	3 cut(s)	780, 1606, 2071
MspR9I	CCNGG	6 cut(s)	675, 765, 956, 1213, 2909, 2915
MunI	CAATTG	1 cut(s)	1227
Mva1269I	GAATGC	1 cut(s)	1216
MvaI	CCWGG	6 cut(s)	675, 765, 956, 1213, 2909, 2915
MvnI	CGCG	2 cut(s)	348, 1515
MwoI	GCNNNNNNNGC	4 cut(s)	74, 1196, 2245, 2403
NcoI	CCATGG	2 cut(s)	226, 1641
NdeI	CATATG	4 cut(s)	880, 1372, 1629, 2653
NlaIV	GGNNCC	8 cut(s)	784, 953, 1107, 1355, 1721, 2612, 2624, 2948
NmuCI	GTSAC	3 cut(s)	839, 1788, 2896
NsiI	ATGCAT	2 cut(s)	1372, 2250
NspI	RCATGY	3 cut(s)	2371, 2522, 2584
NspV	TTCGAA	2 cut(s)	2077, 2731
PaeR7I	CTCGAG	1 cut(s)	1425
PagI	TCATGA	2 cut(s)	2529, 2940
PceI	AGGCCT	2 cut(s)	336, 1211
PciI	ACATGT	3 cut(s)	2367, 2518, 2580
PcsI	WCGNNNNNNNCGW	2 cut(s)	457, 1597
PctI	GAATGC	1 cut(s)	1216
PfeI	GAWTC	8 cut(s)	108, 428, 446, 1689, 2074, 2079, 2272, 2646
PflMI	CCANNNNNTGG	1 cut(s)	2914
PleI	GAGTC	4 cut(s)	535, 764, 1744, 2375
PmaCI	CACGTG	1 cut(s)	461
PmlI	CACGTG	1 cut(s)	461
PpsI	GAGTC	4 cut(s)	535, 764, 1744, 2375
Ppu21I	YACGTR	3 cut(s)	461, 669, 2896
PpuMI	RGGWCCY	3 cut(s)	1353, 1453, 2911
PscI	ACATGT	3 cut(s)	2367, 2518, 2580
PshBI	ATTAAT	1 cut(s)	1595
Psp124BI	GAGCTC	2 cut(s)	90, 1812
Psp5II	RGGWCCY	3 cut(s)	1353, 1453, 2911
Psp6I	CCWGG	6 cut(s)	673, 763, 954, 1211, 2907, 2913
PspCI	CACGTG	1 cut(s)	461
PspGI	CCWGG	6 cut(s)	673, 763, 954, 1211, 2907, 2913
PspN4I	GGNNCC	8 cut(s)	784, 953, 1107, 1355, 1721, 2612, 2624, 2948
PspPI	GGNCC	6 cut(s)	1232, 1353, 1453, 1520, 2068, 2911
PspPPI	RGGWCCY	3 cut(s)	1353, 1453, 2911
PsrI	GAACNNNNNNTAC	4 cut(s)	2544, 2576, 2594, 2626
PstNI	CAGNNNCTG	2 cut(s)	2663, 2914
PsuI	RGATCY	5 cut(s)	133, 401, 1021, 1062, 1536
RseI	CAYNNNNRTG	2 cut(s)	1221, 1698
SacI	GAGCTC	2 cut(s)	90, 1812
SaqAI	TTAA	9 cut(s)	9, 351, 708, 1403, 1595, 1614, 2205, 2217, 2985
Sau96I	GGNCC	6 cut(s)	1232, 1353, 1453, 1520, 2068, 2911
ScaI	AGTACT	1 cut(s)	2511
SchI	GAGTC	4 cut(s)	536, 765, 1745, 2375
ScrFI	CCNGG	6 cut(s)	675, 765, 956, 1213, 2909, 2915
SduI	GDGCHC	4 cut(s)	90, 1812, 1943, 2670
SexAI	ACCWGGT	1 cut(s)	954
SfcI	CTRYAG	2 cut(s)	1747, 1767
Sfr274I	CTCGAG	1 cut(s)	1425
SfuI	TTCGAA	2 cut(s)	2077, 2731
SinI	GGWCC	6 cut(s)	1232, 1353, 1453, 1520, 2068, 2911
SlaI	CTCGAG	1 cut(s)	1425
SmiMI	CAYNNNNRTG	2 cut(s)	1221, 1698
SmlI	CTYRAG	4 cut(s)	687, 1425, 2090, 2749
SmoI	CTYRAG	4 cut(s)	687, 1425, 2090, 2749
SpeI	ACTAGT	2 cut(s)	2128, 2512
SseBI	AGGCCT	2 cut(s)	336, 1211
SsiI	CCGC	5 cut(s)	1054, 1357, 1657, 2614, 2746
SspI	AATATT	1 cut(s)	583
SspMI	CTAG	3 cut(s)	1541, 2129, 2513
SstI	GAGCTC	2 cut(s)	90, 1812
StuI	AGGCCT	2 cut(s)	336, 1211
StyD4I	CCNGG	6 cut(s)	673, 763, 954, 1211, 2907, 2913
StyI	CCWWGG	6 cut(s)	226, 727, 1540, 1641, 2618, 2800
TaaI	ACNGT	6 cut(s)	1990, 1999, 2018, 2509, 2569, 2779
TaiI	ACGT	7 cut(s)	463, 538, 567, 671, 1005, 2293, 2898
TatI	WGTACW	4 cut(s)	1381, 1959, 2509, 2515
TfiI	GAWTC	8 cut(s)	108, 428, 446, 1689, 2074, 2079, 2272, 2646
Tru1I	TTAA	9 cut(s)	9, 351, 708, 1403, 1595, 1614, 2205, 2217, 2985
Tru9I	TTAA	9 cut(s)	9, 351, 708, 1403, 1595, 1614, 2205, 2217, 2985
TscAI	CASTG	4 cut(s)	429, 615, 2002, 2047
TseFI	GTSAC	3 cut(s)	839, 1788, 2896
Tsp45I	GTSAC	3 cut(s)	839, 1788, 2896
TspDTI	ATGAA	8 cut(s)	17, 669, 1448, 1859, 2126, 2178, 2518, 2651
TspGWI	ACGGA	3 cut(s)	1259, 1688, 3029
TspRI	CASTG	4 cut(s)	429, 615, 2002, 2047
Van91I	CCANNNNNTGG	1 cut(s)	2914
VneI	GTGCAC	1 cut(s)	2666
VpaK11BI	GGWCC	6 cut(s)	1232, 1353, 1453, 1520, 2068, 2911
VspI	ATTAAT	1 cut(s)	1595
XagI	CCTNNNNNAGG	1 cut(s)	257
XapI	RAATTY	3 cut(s)	1815, 2690, 2769
XceI	RCATGY	3 cut(s)	2371, 2522, 2584
XcmI	CCANNNNNNNNNTGG	1 cut(s)	79
XhoI	CTCGAG	1 cut(s)	1425
XmaJI	CCTAGG	1 cut(s)	1540
XmiI	GTMKAC	1 cut(s)	2106
XspI	CTAG	3 cut(s)	1541, 2129, 2513
ZrmI	AGTACT	1 cut(s)	2511
Zsp2I	ATGCAT	2 cut(s)	1372, 2250

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.