Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001052

Physical Location & Seq

Genomic Coordinates Reverse (-)

14453494 .. 14457850

Gene Structure 4357 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G014760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3024 bp

ATGAACAACCTCAAGCTAGGGGTGGATGTGGTTAGTGCCCACAATCTTTTGCCCAAAGATGGGCAAGGTTCATCCAATGCATTTGTGGAGCTGTATTTCGATGGCCAGAGGTTCCGCAGCACTATAAAAGAAAAGGATCTCAGCCCTGTTTGGAACGAGAGCTTCTACTTCAACATCTCTGATCCTTCAAACCTCCACTATCTTAGTCTCGAGGCCTATGTCTACAACGATGTCAAAGCTACTCACTTCAGGTCCTTTCTTGGAAAGATCAGCCTCACTGGAAATTCATTTGTCCCCTATTCTGATGCTGTTGTCTTGCATTACCCTTTGGAAAAGCGTGGCATCTTCTCACGTGTAAGAGGAGAGCTCGGCTTGAAGGTTTATGTTACTGATGACCCAACAATTAAGTCCTCCATCCCATTGCCTGCTTCTGAATCCGTTACTGATCAGGATCCAGGCCTTGCACAGACCCAAGGAGTTTCGACTCCTGGCATGAGCTCATTTCGGAGTGAGAAATCTCAGGCAAGACACACCTTTCACCATCTGCCGAATCCAGGTCAAGAGAGCCAACATCAGCATCATGCTTCTGCTGCACCAGATACTCATTATGTACCCAAGTATGAAACTGATCAAATGAAATCTGAACCGCAGCCTGCAAAGCTGGTTCGCATGTACTCTGCTTCAGCATCACAACCTGTTGACTATGCACTTAAAGAGACAAGCCCTTACCTTGGAGGTGGGAGAGTTGTTGGTGGACGTGTTATTCACGGAGACAAGACTGCAAGCACCTATGATCTAGTTGAAAGGATGTACTTTCTCTATGTAAGGGTTGTTAAAGCTCGCGAGCTTCCTGCCATGGATGTTACTGGAAGTCTAGATCCTTATGTTGAAGCTAGAATTGGAAACTACAAAGGGATTACAAAACACTACGAGAAGCAACAAAATCCAGTATGGAATCAAGTTTTCGCTTTTTCAAAGGACCGCATGCAAGCATCTGTGTTAGAAGTTGTGGTTAAAGACAAGGACCTGCTTAAAGATGACTTTGTGGGAATTGTGAGGTTCGACATCAATGAGGTTCCATTAAGAGTTCCACCTGACAGTCCTCTAGCTCCAGAGTGGTACCGACTTCAGGACAAAAAAGGCCAAAAGATTGAGGGGGAGTTGATGCTTGCAGTCTGGATTGGCACTCAAGCAGATGAGGCTTTTTCTGATGCATGGCACTCTGATGCTGCTACACCTGTTGATAGCTCACCAGCTGCATCCGCTGTGATTCGCTCAAAGGTGTATCATGCACCAAGGTTGTGGTATGTACGTGTGAATGTTATAGAGGCACAAGACCTGTTTGCATCAGAGAAGAATCGTTTCCCAGATGCATATGTCAAGGTACAGATTGGAAACCAGGTTATGAAGACAAGAACACTTCAGGCTCGGAATCTAAACCCACTTTGGAATGAAGACCTTTTATTTGTGGCTTCGGAGCCCTTTGAAGATCATCTGGTCATTTCAGTTGAGGACCGTGTTGGTCCTGGCAAGGATGAAATCCTTGGGAGGGTCATACTACCTCTAAACTCTGTAGATAGGCGTGCCGATGATCGTATGATCCATTCCAGATGGTTTAATCTCAAAAAGCCAGTTGCTGTGGATGTGGATCAGTTGAAAGAAGATAAGTTCTCAAGCCGCATTCATCTTCGAGTTTGTCTTGATGGAGGATACCATGTTCTTGATGAGTCCACTCATTATAGTAGTGACTTACGCCCCACGGCAAAGCAGCTCTGGAGGCCATCCATTGGGGTTTTAGAGCTGGGAATCTTGAATGCCGTGGGGCTGCACCCGATGAAAACAAGAGATGGAAGGGGCACTTCAGATACCTACTGTGTAGCAAAATATGGCCATAAATGGGTCAGGACACGAACCCTTGTTGACAACCTGTGTCCAAAGTACAATGAGCAGTACACCTGGGAGGTGTTTGATCCTTCTACAGTTCTTACAGTAGGTGTATTTGACAACAGCCAGCTTGGGGATAAGGATTCCAATGGTCACAAAGACTTGAAGATTGGAAAGGTTCGTATTCGTATCTCAACACTTGAAGCAGGCCGCATTTACACACACTCATATCCGCTGCTGGTTCTTCACCCAACTGGTGTTAAGAAGATGGGAGAGTTGCATTTGGCTATTCGGTTCTCATGCACATCTTTTGTAAACATGCTTTACACATACTCAAAACCACTGCTACCAAAGATGCACTACGTAAGGCCGTTCAATGTAATGCAGCTTGACATGCTACGTCACCAGGCTGTCAACATAGTTGCAGCAAGGCTAGGCCGAGCTGAGCCACCACTTAGGAAGGAGGTGGTGGAATACATGTCTGATGTGGACTCACATCTTTGGAGCATGAGACGGAGCAAAGCGAATTTCTTCAGGCTTATGACGGTTTTCTCTGGAGTATTTGCTATAGGCAAATGGTTTACTGATATTTGCATGTGGAAGAATCCCATAACCACTGTGCTTGTCCATGTTCTCTTCCTCATGCTTGTTTGCTTTCCAGAACTGATTCTACCCACAGCTTTTCTTTACATGTTTCTGATCGGGGTATGGAACTTCAGATACCGGCCTAGATATCCTCCTCACATGAACACAAAAATCTCACAAGCTGACCTTGTACACCCTGATGAGCTAGACGAGGAGTTCGACACATTTCCAACTAGCAGGAATCCTGAGCTGGTGAGAATGAGGTATGATCGCCTGAGGAGTGTGGCTGGTAGAATTCAGACCGTGGTTGGTGATGTAGCAACTCAAGGAGAGCGGCTTCAGTCACTGTTGAGCTGGCGTGATCCGCGAGCTACAGCACTCTTTGTCACATTATGCCTCATAGCTGCCTTGGTAATGTATGTGACACCATTCCAGGTGGTGGCAGCATTGGCAGGGTTCTTTATGATGAGGCATCCACGATTTCGACATAGGATGCCCTCAGCACCAATCAACTTCTTCCGCAGGCTGCCTGCTAGGACTGATAGTATGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1007

Amino Acids

114.74

Weight (kDa)

9.0

Isoelectric Point (pI)

42.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	5 - 96	2.6e-16	C2 domain
C2	PF00168	273 - 375	2.3e-20	C2 domain
C2	PF00168	436 - 541	1.4e-21	C2 domain
C2	PF00168	597 - 707	7.4e-19	C2 domain
PRT_C	PF08372	852 - 1007	1.4e-80	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11610 AT4G11610 AT4G11610
fragaria_vesca	FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_5g02110 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890 FvH4_7g13890
malus_domestica	MD01G1055400.v1.1 MD06G1081100.v1.1 MD07G1139900.v1.1 MD17G1025600.v1.1
prunus_persica	Prupe.2G165500_v2.0.a1 Prupe.2G165500_v2.0.a1 Prupe.5G098200_v2.0.a1 Prupe.5G098200_v2.0.a1
pyrus_communis	pycom01g08090 pycom06g07810 pycom07g13790 pycom14g09900 pycom17g16030
rosa_chinensis	RchiOBHm_Chr1g0354121 RchiOBHm_Chr1g0354261 RchiOBHm_Chr7g0198021
rosa_laevigata	RLG00000003892 RLG00000028225
rosa_multiflora	Rmu_co8337093.1_g000001 Rmu_co8489259.1_g000001 Rmu_co8505511.1_g000001 Rmu_sc0000221.1_g000032 Rmu_sc0001926.1_g000016 Rmu_sc0006991.1_g000004
rosa_roxburghii	Rroxscaffold_3G00258010 Rroxscaffold_4G00301210
rosa_rugosa	Rorug01G0241600 Rorug01G0241700 Rorug07G0045400 Rorug07G0045500
rosa_samantha	Rh1AG252300 Rh1BG224200 Rh1CG236900 Rh1DG251200 Rh7AG168800 Rh7BG171900 Rh7CG178400 Rh7DG171200
rosa_wichuraiana	Rw1G022010 Rw1G022130 Rw7G014760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1035
Acc65I	GGTACC	1 cut(s)	1119
AccB1I	GGYRCC	1 cut(s)	1119
AccB7I	CCANNNNNTGG	2 cut(s)	1787, 2908
AccBSI	CCGCTC	1 cut(s)	2803
AccI	GTMKAC	1 cut(s)	222
AccII	CGCG	2 cut(s)	843, 2836
AclWI	GGATC	9 cut(s)	144, 176, 446, 459, 872, 1594, 1656, 1964, 2825
AcoI	YGGCCR	2 cut(s)	103, 1888
AcsI	RAATTY	3 cut(s)	283, 2410, 2763
AcuI	CTGAAG	8 cut(s)	232, 666, 1112, 1406, 1845, 2401, 2584, 2792
AcvI	CACGTG	1 cut(s)	353
AfaI	GTAC	9 cut(s)	612, 674, 812, 1121, 1311, 1386, 1940, 1952, 2661
AflIII	ACRYGT	5 cut(s)	352, 757, 1312, 2361, 2574
AjiI	CACGTC	1 cut(s)	758
AjnI	CCWGG	8 cut(s)	454, 487, 553, 1398, 1525, 1955, 2289, 2901
AjuI	GAANNNNNNNTTGG	2 cut(s)	882, 914
AloI	GAACNNNNNNTCC	2 cut(s)	1701, 1733
Alw21I	GWGCWC	2 cut(s)	369, 500
Alw26I	GTCTC	4 cut(s)	212, 710, 765, 2389
AlwI	GGATC	9 cut(s)	144, 176, 446, 459, 872, 1594, 1656, 1964, 2825
AlwNI	CAGNNNCTG	2 cut(s)	1637, 2815
Ama87I	CYCGRG	1 cut(s)	209
ApoI	RAATTY	3 cut(s)	283, 2410, 2763
ArsI	GACNNNNNNTTYG	4 cut(s)	1448, 1480, 2669, 2701
Asp700I	GAANNNNTTC	3 cut(s)	1361, 2414, 2550
Asp718I	GGTACC	1 cut(s)	1119
AspS9I	GGNCC	5 cut(s)	252, 979, 1024, 1513, 1523
AsuHPI	GGTGA	6 cut(s)	530, 1242, 2123, 2279, 2734, 2792
AvaI	CYCGRG	1 cut(s)	209
AvaII	GGWCC	5 cut(s)	252, 979, 1024, 1513, 1523
AxyI	CCTNAGG	1 cut(s)	2744
BaeGI	GKGCMC	2 cut(s)	40, 1859
BalI	TGGCCA	2 cut(s)	105, 1890
BamHI	GGATCC	1 cut(s)	451
BanI	GGYRCC	1 cut(s)	1119
BanII	GRGCYC	3 cut(s)	369, 500, 1482
BbrPI	CACGTG	1 cut(s)	353
BbsI	GAAGAC	2 cut(s)	1415, 1461
Bbv12I	GWGCWC	2 cut(s)	369, 500
BbvCI	CCTCAGC	1 cut(s)	2968
BccI	CCATC	9 cut(s)	53, 95, 422, 549, 1605, 1697, 1789, 1841, 2146
BceAI	ACGGC	3 cut(s)	1776, 1802, 2239
BcgI	CGANNNNNNTGC	2 cut(s)	833, 867
BciT130I	CCWGG	8 cut(s)	456, 489, 555, 1400, 1527, 1957, 2291, 2903
BciVI	GTATCC	1 cut(s)	1703
BclI	TGATCA	2 cut(s)	445, 628
BcoDI	GTCTC	4 cut(s)	212, 710, 765, 2389
BfmI	CTRYAG	4 cut(s)	1572, 1977, 2451, 2841
BfuAI	ACCTGC	1 cut(s)	1035
BfuI	GTATCC	1 cut(s)	1703
BlpI	GCTNAGC	1 cut(s)	2328
Bme1390I	CCNGG	8 cut(s)	456, 489, 555, 1400, 1527, 1957, 2291, 2903
Bme18I	GGWCC	5 cut(s)	252, 979, 1024, 1513, 1523
BmeT110I	CYCGRG	1 cut(s)	209
BmgBI	CACGTC	1 cut(s)	758
BmgT120I	GGNCC	5 cut(s)	252, 979, 1024, 1513, 1523
BmiI	GGNNCC	5 cut(s)	113, 453, 1077, 1121, 1479
BmrFI	CCNGG	8 cut(s)	456, 489, 555, 1400, 1527, 1957, 2291, 2903
BpiI	GAAGAC	2 cut(s)	1415, 1461
BplI	GAGNNNNNCTC	2 cut(s)	351, 383
BpmI	CTGGAG	3 cut(s)	1095, 1795, 2460
Bpu10I	CCTNAGC	2 cut(s)	2715, 2968
Bpu1102I	GCTNAGC	1 cut(s)	2328
BpuEI	CTTGAG	3 cut(s)	1173, 1657, 2778
BsaAI	YACGTR	3 cut(s)	353, 1313, 2248
BsaBI	GATNNNNATC	2 cut(s)	450, 1647
Bse118I	RCCGGY	1 cut(s)	2607
Bse1I	ACTGG	5 cut(s)	283, 871, 947, 1631, 2143
Bse21I	CCTNAGG	1 cut(s)	2744
Bse3DI	GCAATG	1 cut(s)	419
Bse8I	GATNNNNATC	2 cut(s)	450, 1647
BseBI	CCWGG	8 cut(s)	456, 489, 555, 1400, 1527, 1957, 2291, 2903
BseJI	GATNNNNATC	2 cut(s)	450, 1647
BseMI	GCAATG	1 cut(s)	419
BseMII	CTCAG	6 cut(s)	154, 533, 2319, 2706, 2735, 2982
BseNI	ACTGG	5 cut(s)	283, 871, 947, 1631, 2143
BseRI	GAGGAG	4 cut(s)	375, 2613, 2696, 2761
BseSI	GKGCMC	2 cut(s)	40, 1859
BseYI	CCCAGC	1 cut(s)	1801
BsgI	GTGCAG	2 cut(s)	576, 1811
Bsh1236I	CGCG	2 cut(s)	843, 2836
BshNI	GGYRCC	1 cut(s)	1119
BsiHKAI	GWGCWC	2 cut(s)	369, 500
BsiHKCI	CYCGRG	1 cut(s)	209
BsiSI	CCGG	1 cut(s)	2608
BslFI	GGGAC	1 cut(s)	278
BsmAI	GTCTC	4 cut(s)	212, 710, 765, 2389
BsmBI	CGTCTC	1 cut(s)	2389
BsmFI	GGGAC	1 cut(s)	278
BsmI	GAATGC	2 cut(s)	1680, 1819
BsoBI	CYCGRG	1 cut(s)	209
Bsp1286I	GDGCHC	5 cut(s)	40, 369, 500, 1482, 1859
Bsp1407I	TGTACA	1 cut(s)	2659
Bsp1720I	GCTNAGC	1 cut(s)	2328
Bsp19I	CCATGG	1 cut(s)	855
Bsp68I	TCGCGA	1 cut(s)	843
BspCNI	CTCAG	6 cut(s)	153, 532, 2320, 2707, 2736, 2981
BspFNI	CGCG	2 cut(s)	843, 2836
BspLI	GGNNCC	5 cut(s)	113, 453, 1077, 1121, 1479
BspMI	ACCTGC	1 cut(s)	1035
BspPI	GGATC	9 cut(s)	144, 176, 446, 459, 872, 1594, 1656, 1964, 2825
BspT107I	GGYRCC	1 cut(s)	1119
BsrBI	CCGCTC	1 cut(s)	2803
BsrDI	GCAATG	1 cut(s)	419
BsrFI	RCCGGY	1 cut(s)	2607
BsrGI	TGTACA	1 cut(s)	2659
BsrI	ACTGG	5 cut(s)	283, 871, 947, 1631, 2143
BssAI	RCCGGY	1 cut(s)	2607
BssT1I	CCWWGG	6 cut(s)	472, 730, 855, 1295, 1543, 2877
Bst2UI	CCWGG	8 cut(s)	456, 489, 555, 1400, 1527, 1957, 2291, 2903
Bst4CI	ACNGT	9 cut(s)	1100, 1517, 1874, 1981, 1990, 2431, 2503, 2773, 2817
Bst6I	CTCTTC	1 cut(s)	2525
BstAUI	TGTACA	1 cut(s)	2659
BstBAI	YACGTR	3 cut(s)	353, 1313, 2248
BstDEI	CTNAG	8 cut(s)	140, 203, 519, 2328, 2339, 2715, 2744, 2968
BstDSI	CCRYGG	4 cut(s)	855, 1758, 1818, 2772
BstFNI	CGCG	2 cut(s)	843, 2836
BstMAI	GTCTC	4 cut(s)	212, 710, 765, 2389
BstMWI	GCNNNNNNNGC	8 cut(s)	590, 658, 1199, 1262, 1777, 2278, 2833, 2918
BstNI	CCWGG	8 cut(s)	456, 489, 555, 1400, 1527, 1957, 2291, 2903
BstNSI	RCATGY	7 cut(s)	673, 988, 2206, 2281, 2365, 2482, 2578
BstSCI	CCNGG	8 cut(s)	454, 487, 553, 1398, 1525, 1955, 2289, 2901
BstSFI	CTRYAG	4 cut(s)	1572, 1977, 2451, 2841
BstSLI	GKGCMC	2 cut(s)	40, 1859
BstSNI	TACGTA	1 cut(s)	2248
BstUI	CGCG	2 cut(s)	843, 2836
BstV2I	GAAGAC	2 cut(s)	1415, 1461
BstX2I	RGATCY	3 cut(s)	136, 451, 877
BstXI	CCANNNNNNTGG	1 cut(s)	1302
BstYI	RGATCY	3 cut(s)	136, 451, 877
Bsu36I	CCTNAGG	1 cut(s)	2744
BsuI	GTATCC	1 cut(s)	1703
BtgI	CCRYGG	4 cut(s)	855, 1758, 1818, 2772
BtrI	CACGTC	1 cut(s)	758
BtsI	GCAGTG	1 cut(s)	2225
BtsIMutI	CAGTG	4 cut(s)	276, 2225, 2499, 2813
BtuMI	TCGCGA	1 cut(s)	843
BveI	ACCTGC	1 cut(s)	1035
CaiI	CAGNNNCTG	2 cut(s)	1637, 2815
Cfr10I	RCCGGY	1 cut(s)	2607
Cfr13I	GGNCC	5 cut(s)	252, 979, 1024, 1513, 1523
CsiI	ACCWGGT	1 cut(s)	1398
Csp6I	GTAC	9 cut(s)	611, 673, 811, 1120, 1310, 1385, 1939, 1951, 2660
CspCI	CAANNNNNGTGG	2 cut(s)	2488, 2523
CviQI	GTAC	9 cut(s)	611, 673, 811, 1120, 1310, 1385, 1939, 1951, 2660
DdeI	CTNAG	8 cut(s)	140, 203, 519, 2328, 2339, 2715, 2744, 2968
EaeI	YGGCCR	2 cut(s)	103, 1888
Eam1104I	CTCTTC	1 cut(s)	2525
EarI	CTCTTC	1 cut(s)	2525
Ecl136II	GAGCTC	2 cut(s)	367, 498
Eco105I	TACGTA	1 cut(s)	2248
Eco130I	CCWWGG	6 cut(s)	472, 730, 855, 1295, 1543, 2877
Eco147I	AGGCCT	2 cut(s)	215, 459
Eco24I	GRGCYC	3 cut(s)	369, 500, 1482
Eco32I	GATATC	1 cut(s)	2618
Eco47I	GGWCC	5 cut(s)	252, 979, 1024, 1513, 1523
Eco53kI	GAGCTC	2 cut(s)	367, 498
Eco57I	CTGAAG	8 cut(s)	232, 666, 1112, 1406, 1845, 2401, 2584, 2792
Eco72I	CACGTG	1 cut(s)	353
Eco81I	CCTNAGG	1 cut(s)	2744
Eco88I	CYCGRG	1 cut(s)	209
EcoICRI	GAGCTC	2 cut(s)	367, 498
EcoO109I	RGGNCCY	2 cut(s)	252, 1024
EcoRI	GAATTC	1 cut(s)	2763
EcoRII	CCWGG	8 cut(s)	454, 487, 553, 1398, 1525, 1955, 2289, 2901
EcoRV	GATATC	1 cut(s)	2618
EcoT14I	CCWWGG	6 cut(s)	472, 730, 855, 1295, 1543, 2877
EcoT22I	ATGCAT	3 cut(s)	82, 1216, 1375
EcoT38I	GRGCYC	3 cut(s)	369, 500, 1482
ErhI	CCWWGG	6 cut(s)	472, 730, 855, 1295, 1543, 2877
Esp3I	CGTCTC	1 cut(s)	2389
FalI	AAGNNNNNCTT	4 cut(s)	1843, 1875, 2640, 2672
FaqI	GGGAC	1 cut(s)	278
FauNDI	CATATG	1 cut(s)	1375
FbaI	TGATCA	2 cut(s)	445, 628
FblI	GTMKAC	1 cut(s)	222
FriOI	GRGCYC	3 cut(s)	369, 500, 1482
GsaI	CCCAGC	1 cut(s)	1805
GsuI	CTGGAG	3 cut(s)	1095, 1795, 2460
HapII	CCGG	1 cut(s)	2608
HincII	GTYRAC	3 cut(s)	700, 1921, 2299
HindII	GTYRAC	3 cut(s)	700, 1921, 2299
HpaII	CCGG	1 cut(s)	2608
HphI	GGTGA	6 cut(s)	530, 1242, 2123, 2279, 2734, 2792
HpyAV	CCTTC	5 cut(s)	195, 370, 1845, 1983, 2338
HpyCH4III	ACNGT	9 cut(s)	1100, 1517, 1874, 1981, 1990, 2431, 2503, 2773, 2817
HpyCH4IV	ACGT	5 cut(s)	352, 757, 1312, 2247, 2284
HpyF10VI	GCNNNNNNNGC	8 cut(s)	590, 658, 1199, 1262, 1777, 2278, 2833, 2918
HpyF3I	CTNAG	8 cut(s)	140, 203, 519, 2328, 2339, 2715, 2744, 2968
HpySE526I	ACGT	5 cut(s)	352, 757, 1312, 2247, 2284
KpnI	GGTACC	1 cut(s)	1123
Ksp22I	TGATCA	2 cut(s)	445, 628
LmnI	GCTCC	5 cut(s)	88, 1114, 1477, 2388, 2400
MabI	ACCWGGT	1 cut(s)	1398
MaeII	ACGT	5 cut(s)	352, 757, 1312, 2247, 2284
MaeIII	GTNAC	9 cut(s)	385, 439, 862, 1745, 2036, 2285, 2811, 2854, 2890
MbiI	CCGCTC	1 cut(s)	2803
MflI	RGATCY	3 cut(s)	136, 451, 877
MhlI	GDGCHC	5 cut(s)	40, 369, 500, 1482, 1859
MlsI	TGGCCA	2 cut(s)	105, 1890
MluCI	AATT	6 cut(s)	283, 402, 897, 1050, 2410, 2763
MluNI	TGGCCA	2 cut(s)	105, 1890
MlyI	GAGTC	3 cut(s)	478, 1736, 2369
MmeI	TCCRAC	1 cut(s)	2723
Mox20I	TGGCCA	2 cut(s)	105, 1890
Mph1103I	ATGCAT	3 cut(s)	82, 1216, 1375
MroXI	GAANNNNTTC	3 cut(s)	1361, 2414, 2550
MscI	TGGCCA	2 cut(s)	105, 1890
MseI	TTAA	8 cut(s)	405, 711, 834, 1014, 1032, 1082, 1617, 2145
MslI	CAYNNNNRTG	2 cut(s)	1224, 2667
Msp20I	TGGCCA	2 cut(s)	105, 1890
MspA1I	CMGCKG	3 cut(s)	1256, 1265, 2119
MspI	CCGG	1 cut(s)	2608
MspR9I	CCNGG	8 cut(s)	456, 489, 555, 1400, 1527, 1957, 2291, 2903
Mva1269I	GAATGC	2 cut(s)	1680, 1819
MvaI	CCWGG	8 cut(s)	456, 489, 555, 1400, 1527, 1957, 2291, 2903
MvnI	CGCG	2 cut(s)	843, 2836
MwoI	GCNNNNNNNGC	8 cut(s)	590, 658, 1199, 1262, 1777, 2278, 2833, 2918
NcoI	CCATGG	1 cut(s)	855
NdeI	CATATG	1 cut(s)	1375
NlaIV	GGNNCC	5 cut(s)	113, 453, 1077, 1121, 1479
NmeAIII	GCCGAG	2 cut(s)	348, 2348
NmuCI	GTSAC	6 cut(s)	1745, 2036, 2285, 2811, 2854, 2890
NruI	TCGCGA	1 cut(s)	843
NsiI	ATGCAT	3 cut(s)	82, 1216, 1375
NspI	RCATGY	7 cut(s)	673, 988, 2206, 2281, 2365, 2482, 2578
PaeI	GCATGC	1 cut(s)	988
PaeR7I	CTCGAG	1 cut(s)	209
PceI	AGGCCT	2 cut(s)	215, 459
PciI	ACATGT	2 cut(s)	2361, 2574
PcsI	WCGNNNNNNNCGW	1 cut(s)	2685
PctI	GAATGC	2 cut(s)	1680, 1819
PdmI	GAANNNNTTC	3 cut(s)	1361, 2414, 2550
PflMI	CCANNNNNTGG	2 cut(s)	1787, 2908
PleI	GAGTC	3 cut(s)	478, 1735, 2369
PmaCI	CACGTG	1 cut(s)	353
PmlI	CACGTG	1 cut(s)	353
PpsI	GAGTC	3 cut(s)	478, 1735, 2369
Ppu21I	YACGTR	3 cut(s)	353, 1313, 2248
PpuMI	RGGWCCY	2 cut(s)	252, 1024
PscI	ACATGT	2 cut(s)	2361, 2574
Psp124BI	GAGCTC	2 cut(s)	369, 500
Psp5II	RGGWCCY	2 cut(s)	252, 1024
Psp6I	CCWGG	8 cut(s)	454, 487, 553, 1398, 1525, 1955, 2289, 2901
PspCI	CACGTG	1 cut(s)	353
PspFI	CCCAGC	1 cut(s)	1801
PspGI	CCWGG	8 cut(s)	454, 487, 553, 1398, 1525, 1955, 2289, 2901
PspN4I	GGNNCC	5 cut(s)	113, 453, 1077, 1121, 1479
PspPI	GGNCC	5 cut(s)	252, 979, 1024, 1513, 1523
PspPPI	RGGWCCY	2 cut(s)	252, 1024
PsrI	GAACNNNNNNTAC	4 cut(s)	2538, 2570, 2588, 2620
PstNI	CAGNNNCTG	2 cut(s)	1637, 2815
PsuI	RGATCY	3 cut(s)	136, 451, 877
PvuII	CAGCTG	1 cut(s)	1256
RruI	TCGCGA	1 cut(s)	843
RsaI	GTAC	9 cut(s)	612, 674, 812, 1121, 1311, 1386, 1940, 1952, 2661
RsaNI	GTAC	9 cut(s)	611, 673, 811, 1120, 1310, 1385, 1939, 1951, 2660
RseI	CAYNNNNRTG	2 cut(s)	1224, 2667
SacI	GAGCTC	2 cut(s)	369, 500
SaqAI	TTAA	8 cut(s)	405, 711, 834, 1014, 1032, 1082, 1617, 2145
Sau96I	GGNCC	5 cut(s)	252, 979, 1024, 1513, 1523
SchI	GAGTC	3 cut(s)	478, 1736, 2369
ScrFI	CCNGG	8 cut(s)	456, 489, 555, 1400, 1527, 1957, 2291, 2903
SduI	GDGCHC	5 cut(s)	40, 369, 500, 1482, 1859
SexAI	ACCWGGT	1 cut(s)	1398
SfcI	CTRYAG	4 cut(s)	1572, 1977, 2451, 2841
Sfr274I	CTCGAG	1 cut(s)	209
SinI	GGWCC	5 cut(s)	252, 979, 1024, 1513, 1523
SlaI	CTCGAG	1 cut(s)	209
SmiMI	CAYNNNNRTG	2 cut(s)	1224, 2667
SmlI	CTYRAG	5 cut(s)	11, 209, 1188, 1672, 2793
SmoI	CTYRAG	5 cut(s)	11, 209, 1188, 1672, 2793
SnaBI	TACGTA	1 cut(s)	2248
SphI	GCATGC	1 cut(s)	988
Sse9I	AATT	6 cut(s)	283, 402, 897, 1050, 2410, 2763
SseBI	AGGCCT	2 cut(s)	215, 459
SstI	GAGCTC	2 cut(s)	369, 500
StuI	AGGCCT	2 cut(s)	215, 459
StyD4I	CCNGG	8 cut(s)	454, 487, 553, 1398, 1525, 1955, 2289, 2901
StyI	CCWWGG	6 cut(s)	472, 730, 855, 1295, 1543, 2877
TaaI	ACNGT	9 cut(s)	1100, 1517, 1874, 1981, 1990, 2431, 2503, 2773, 2817
TaiI	ACGT	5 cut(s)	355, 760, 1315, 2250, 2287
TaqI	TCGA	7 cut(s)	99, 210, 482, 1062, 1690, 2688, 2953
TasI	AATT	6 cut(s)	283, 402, 897, 1050, 2410, 2763
TatI	WGTACW	5 cut(s)	672, 810, 1938, 1950, 2659
TauI	GCSGC	3 cut(s)	1680, 2097, 2806
Tru1I	TTAA	8 cut(s)	405, 711, 834, 1014, 1032, 1082, 1617, 2145
Tru9I	TTAA	8 cut(s)	405, 711, 834, 1014, 1032, 1082, 1617, 2145
TscAI	CASTG	4 cut(s)	283, 2232, 2506, 2820
TseFI	GTSAC	6 cut(s)	1745, 2036, 2285, 2811, 2854, 2890
Tsp45I	GTSAC	6 cut(s)	1745, 2036, 2285, 2811, 2854, 2890
TspGWI	ACGGA	3 cut(s)	427, 783, 2413
TspRI	CASTG	4 cut(s)	283, 2232, 2506, 2820
Van91I	CCANNNNNTGG	2 cut(s)	1787, 2908
VpaK11BI	GGWCC	5 cut(s)	252, 979, 1024, 1513, 1523
XapI	RAATTY	3 cut(s)	283, 2410, 2763
XbaI	TCTAGA	1 cut(s)	874
XceI	RCATGY	7 cut(s)	673, 988, 2206, 2281, 2365, 2482, 2578
XcmI	CCANNNNNNNNNTGG	1 cut(s)	82
XhoI	CTCGAG	1 cut(s)	209
XmiI	GTMKAC	1 cut(s)	222
XmnI	GAANNNNTTC	3 cut(s)	1361, 2414, 2550
Zsp2I	ATGCAT	3 cut(s)	82, 1216, 1375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.