FvH4_5g03782

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0002044
Physical Location & Seq
Reverse (-)
2235501 .. 2240641
5141 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g03782.t1

Sequence Viewer

Length: 4005 bp
ATGAAATTCTTTGCGATTTTTAGTTTCTTAATTGCATTGTTTGTTTGTGGTTCTGCTACTTGGGAATGTGCACTAGATGAGGAAGTATCAGTTAATATTGTTTTGAACATTCTTTGTTTCCCTGGATCAATTCTCTTGCTCTTTACTGCATCTGAGGGAAACAGTTGCGCACAAGGTGATCTGGAAGTCCATTATGGTGATGCATTCTACACACCTTTGCCTGGTGAAGAACCGAAAATCACAGGTGCAATCAGTTCAGATGACAATGTGACTCCTTTTGCGAAGGCTGGATTGTTCAGTAAAATGACATTCTGGTGGTTGAATCCATTGATGAAGAAAGGTAAGGAAAAGATTCTTGAGAATGAAGATATTCCACAATTGCGAGAAGCTGATCGAGCAAGAACGTTGCACTCAATATTTAGGGAGCAATTGCAGAAAAGAAAGGAAAGACATCCATCCAGTGGTGACCCTTCTGTTCTGACCATAATTTTTTTCTGCCAGTGGAAAGCAATTTTGGTTTCAGGGTTCTTTGCACTCCTCAAGATTCTCGCAATGACTGTCTCCCCACTGTTTCTCATAGCTTTCATCAAGGTTGTTGATGCCAATGCAGCTTCTAGATATGAGGTTTATGCACTGACCGCTGGTCTGTTCTTTGTGAAAATTGTGGAGTCACTGTCGGAGAGGCAATGGTTCTTTAGAACTAGACTTATTGGACTCCAGATAAGATCATTGATATCTGCAGAAGTTTATCAGAAGCAACTAAGACTCTCAAATGCTGCCAAGATGACTCATTCTCCTGGTGAGATGGTGAATTATGTAACAGTGGATGCTTACAGGGTTGGTGAATTTCCATTCTGGTTGCATCAGATTTGGTCCACAACCCTCCAGTTGTGTCTCTCTTTGATTATTATTTACTTCGCTGTTGGGGCAGCAACAGTTGCAGCTGTAACTGCTCTCATATTGACTGTGGTGGTAAGCTCTCCATTGGCAAAGTTGCAGCATGAATATCAAACAAAGTTCATGATTGCACAAAAGAAGAGGCTGAAGGCCATGACGGAAGCACTATCAAATATGAAGATCTTGAAGCTGTATTCTTGGGAGAAAAATTTCAAGAAGGTCATAGAAGAGCTTAGAGTAGAAGAACTCAAATGGATATCTAAAGTAGTCTCACAAAAGGGTTATTGTAATGCTTTATTCTGGACAGCACCTGTTTTGGCAGCAGCTGTCACCTTTTGGACATGCTACTTGCTTGGATTTGCACTCTCTCCAAGTAATGTCTTCACTTTTTTAGCAACTTTGCGTATTCTTCAGGAGCCAATAAGGTTTATCCCAGATGTTTTGGGAGCATTCATTGAAGCACAGGTGTCCTTCTCTCAGATTGTGAAGTTCCTTGATGCACCAGAGTTGGAGAACAGACATACAAGGAAAGTGAGCAGTGGCAAGGAGGTTGAACATTCCATTTTCATTAGATCTTCAGAAATTTCATGGGATACTAGTCCTACAAAGCCTACATTGAGGAACATAGATTTAGTGGTGAAACAAGGAGAAAAAGTAGCTATTTGTGGAGAGGTTGGCTCAGGAAAATCAACTCTTTTGGCTGCTATTCTTGGAGAAGTTCCACATATCACTGGCATTGTTCAAGTATATGGCACGATAGCATATGTTTCTCAGTCTGCTTGGATTGAAACAGGAACTATACAAGATAATATTCTGTTTGGGACTCCCATGGATCATGTTAGATACCATGAAACTCTTAGGAAGTGTTCTCTTGTAAAGGACTTAGATATACTTCCATTCCGAGATCTCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGTGGCCAGAAGCAACGCATCCAACTGGCACGTGCATTGTATCAAAATGCAGATGTCTACCTCTTGGATGATCCATTCAGTGCGGACTATGTCATGGGTGCTCTGGCAGAGAAGACAGTGTTGCTTGTGACACACCAAGTCGACTTCCTTCAATCTTTTGATTCAATATTGTTGATGTCTTCAGGGACGATTTCAGGAGCAGCTCCTTACGAAGAGTTGCTGGCTTTTTGTCAAGAATTTCGAGAACCTGTTAATGCACACAATAAGAATTTTGGTTCCCAGAGGCAAGTTGAATATGCCTCCACTAGAAAACATAAATCGTCTGCAGAGGAGATTGAGAATGTTAGAACTGACGTACAACTTATAGAATTTTCGGGAGATCAATTGATTAAGAAAGAAGAGAGAGAAACAGGAGACACTGGGTTCAAGCCATGCATTCAGTATTTGAAGCATGGCAAGGGATTCTTGCACTTCTCTTTATCAGTTGTTTTCTTGTTTCTATTCATAGTTGGGCAGTTACTTCAAAACTTTTGGTTGGCTTTGAATCTTCAGGATTACAGCATTTCCAGGGTCAAACTCTTCACAGTTTACTCTGTGATCTTTTGTATTATGGCCTTCTGTATGCTTCTTCGATCTTTTAGGATTGTCGATTTAGGATGTGGAGCATCAGAATCCATTTTCTCCACCCTACTGAACTCCCTTTTCCGAGCACCAATGCTGTTTTATGATTCAACACCTTTGGGGAGGATACTTAGTCGGGTATCTACTGATATGAATATCATCGACCTTGAAGTAGCGCTAAGGTTAACAGTAGCTGTTGGAGCAACTCTGAACACATTTAGCATATTCTTAGTCATGGTTTTTCTTACTTGGCCACTACTATTCCTGATTGTACCTACAGTTTATGTTACTTTTCGCCTTCAGAGTTACTACTTTGCATCTTCAAAAGAGTTGATGCGCATGAATGGCACGACTAAGTCTGCACTTGCAAGCCACCTTTCAGAATCTATTGCTGGAGCAGTGACAATCAGAGCTTTTGGACAGGAGGAAAGATTCTTCTCCAAAAACTTAGAATTCATTGATGCAAATTCTAGTGCTGACTTCAATAGCTTCTCAACCAACGAGTGGTTAATTGAACGTCTAGAATTGCTTTGTGCTATTGTTCTCTCAGCCTCAGCATTTGCCATTACTTCGATTCAGTCCGGTGCTTCTTCATCTGGATTTATTGGGATGACACTATCATATGGCCTTTCACTGAATATCTTTCTAGTACTTTTGGTCCAATTTCATTGCTTTTTAGCAAATTCAATCATTTCTGTAGAAAGGGTAGAACAATACATGCACATTCCTAGCGAAGCTGCAGAAGTGATAAAAGACAACCGACCTGCACACAATTGGCCTATTGTTGGTAAAGTGGAAATACATGACTTAGAGGTAAGATATAGGCCAAATTCTCCTTTGGTTCTCCATGGGATAAACTGCATCATTGAGGGAGGCCACAAAATTGGAATTGTTGGCCGGACTGGAAGTGGAAAGACAACTCTTATCAGTGTTTTGTTTCGTCTGGTAGAGCCTACAGGGGGAAGGGTCATCGTTGATGGCTATGACATATGCACAATTGGCCTTTATGATTTAAGATCACGTTTTGGGATCATCCCTCAAGATCCGACATTGTTTGGCGGGTCTGTGAGATACAACCTCGATCCCTTGGCAGAGCATACCGATCATGAAATATGGGAGGTTCTTGAGAAATGTCAGCTACGGGAGGCCATTGGAGAGGAAGAAGGGGGCCTGGATTCTTTAGTTGTGCAAGACGGAACAAACTGGAGCATGGGACAACGACAACTGTTCTGCTTGGGGCGTGCTTTACTGAAGAAAAGCCGAATTCTAGTGCTTGATGAAGCCACAGCATCAATGGACAATGCAACAGACTCTTTTCTCCAAAAAACTATAAGAACAGAATTTGCAGACTGCACTGTAATAACAGTGGCACATAGGATACCCACCGTGATGGACTGCACTAAGGTTCTCGCTCTTAGTGATGGCAAAGTAGTAGAGTATGATGAGCCAATGAAGCTGATGAACAATGAGGGATCACTATTCGGGCAGCTTGTTAAGGAATACTGGTCTCGTTCTGCCAATGCTAGCATGCACTCAGAAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1335

Amino Acids

149.33

Weight (kDa)

6.19

Isoelectric Point (pI)

37.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 2 - 54 1.2e-10 ABCC10 N-terminal domain
ABC_membrane PF00664 172 - 439 1.4e-25 ABC transporter transmembrane region
ABC_tran PF00005 505 - 639 4.5e-21 ABC transporter
ABC_membrane PF00664 773 - 1028 8.4e-28 ABC transporter transmembrane region
ABC_tran PF00005 1102 - 1250 5.6e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 169, 2798
Acc36I ACCTGC 1 cut(s) 3232
AccB7I CCANNNNNTGG 2 cut(s) 461, 2964
AccI GTMKAC 2 cut(s) 1896, 1980
AciI CCGC 3 cut(s) 639, 1922, 3519
AclI AACGTT 1 cut(s) 404
AclWI GGATC 7 cut(s) 133, 1737, 1904, 3497, 3497, 3536, 3940
AcoI YGGCCR 3 cut(s) 1843, 2711, 3355
AcuI CTGAAG 7 cut(s) 1064, 1292, 1458, 2004, 2372, 2744, 3731
AcvI CACGTG 1 cut(s) 1871
AdeI CACNNNGTG 1 cut(s) 176
AfaI GTAC 3 cut(s) 2196, 2733, 3111
AfeI AGCGCT 1 cut(s) 2637
AfiI CCNNNNNNNGG 5 cut(s) 221, 461, 2964, 3245, 3419
AhdI GACNNNNNGTC 1 cut(s) 642
AhlI ACTAGT 1 cut(s) 1493
AjnI CCWGG 5 cut(s) 121, 220, 796, 2405, 3630
AjuI GAANNNNNNNTTGG 2 cut(s) 497, 529
Alw21I GWGCWC 3 cut(s) 73, 1942, 2551
Alw26I GTCTC 5 cut(s) 565, 899, 1171, 2247, 3972
Alw44I GTGCAC 1 cut(s) 69
AlwI GGATC 7 cut(s) 133, 1737, 1904, 3497, 3497, 3536, 3940
AlwNI CAGNNNCTG 3 cut(s) 1208, 1223, 2654
Aor51HI AGCGCT 1 cut(s) 2637
ApaLI GTGCAC 1 cut(s) 69
Asp700I GAANNNNTTC 3 cut(s) 351, 369, 1106
AspLEI GCGC 3 cut(s) 170, 2638, 2799
AspS9I GGNCC 3 cut(s) 873, 3118, 3628
AsuHPI GGTGA 9 cut(s) 188, 209, 236, 476, 812, 820, 854, 1219, 1546
AsuNHI GCTAGC 1 cut(s) 3983
AvaII GGWCC 2 cut(s) 873, 3118
BaeGI GKGCMC 1 cut(s) 73
BalI TGGCCA 2 cut(s) 1845, 2713
BbrPI CACGTG 1 cut(s) 1871
BbsI GAAGAC 3 cut(s) 1270, 1958, 2010
Bbv12I GWGCWC 3 cut(s) 73, 1942, 2551
BbvCI CCTCAGC 1 cut(s) 3013
BccI CCATC 5 cut(s) 463, 799, 3431, 3844, 3875
BciT130I CCWGG 5 cut(s) 123, 222, 798, 2407, 3632
BciVI GTATCC 3 cut(s) 1483, 2580, 3831
BcoDI GTCTC 5 cut(s) 565, 899, 1171, 2247, 3972
BcuI ACTAGT 1 cut(s) 1493
BfmI CTRYAG 6 cut(s) 738, 2163, 2736, 3156, 3198, 3414
BfoI RGCGCY 1 cut(s) 2639
BfuAI ACCTGC 1 cut(s) 3232
BfuI GTATCC 3 cut(s) 1483, 2580, 3831
BglII AGATCT 3 cut(s) 1077, 1469, 1801
BmcAI AGTACT 1 cut(s) 3111
Bme1390I CCNGG 5 cut(s) 123, 222, 798, 2407, 3632
Bme18I GGWCC 2 cut(s) 873, 3118
BmeRI GACNNNNNGTC 1 cut(s) 642
BmgT120I GGNCC 3 cut(s) 873, 3118, 3628
BmiI GGNNCC 3 cut(s) 1314, 2116, 3629
BmrFI CCNGG 5 cut(s) 123, 222, 798, 2407, 3632
BmrI ACTGGG 1 cut(s) 2268
BmtI GCTAGC 1 cut(s) 3987
BmuI ACTGGG 1 cut(s) 2268
BpiI GAAGAC 3 cut(s) 1270, 1958, 2010
BplI GAGNNNNNCTC 2 cut(s) 1559, 1591
BpmI CTGGAG 4 cut(s) 701, 869, 2874, 3685
Bpu10I CCTNAGC 3 cut(s) 1576, 2639, 3013
BpuEI CTTGAG 4 cut(s) 377, 524, 3483, 3605
BsaAI YACGTR 1 cut(s) 1871
BsaI GGTCTC 1 cut(s) 3972
BsaJI CCNNGG 5 cut(s) 121, 1725, 2406, 3307, 3546
BsaWI WCCGGW 1 cut(s) 3041
BsaXI ACNNNNNCTCC 6 cut(s) 659, 689, 778, 808, 1536, 1566
Bsc4I CCNNNNNNNGG 5 cut(s) 221, 461, 2964, 3245, 3419
Bse1I ACTGG 9 cut(s) 459, 499, 886, 1633, 1869, 2263, 3367, 3668, 3968
Bse3DI GCAATG 3 cut(s) 558, 692, 3127
BseBI CCWGG 5 cut(s) 123, 222, 798, 2407, 3632
BseDI CCNNGG 5 cut(s) 121, 1725, 2406, 3307, 3546
BseGI GGATG 8 cut(s) 451, 455, 832, 1857, 1912, 2501, 3075, 3492
BseLI CCNNNNNNNGG 5 cut(s) 221, 461, 2964, 3245, 3419
BseMI GCAATG 3 cut(s) 558, 692, 3127
BseMII CTCAG 7 cut(s) 144, 1388, 1590, 1682, 1823, 3021, 3027
BseNI ACTGG 9 cut(s) 459, 499, 886, 1633, 1869, 2263, 3367, 3668, 3968
BseRI GAGGAG 2 cut(s) 527, 2183
BseSI GKGCMC 1 cut(s) 73
BsgI GTGCAG 4 cut(s) 2805, 3210, 3796, 3841
BsiHKAI GWGCWC 3 cut(s) 73, 1942, 2551
BsiSI CCGG 2 cut(s) 3042, 3358
BslFI GGGAC 3 cut(s) 1732, 2038, 3687
BslI CCNNNNNNNGG 5 cut(s) 221, 461, 2964, 3245, 3419
BsmAI GTCTC 5 cut(s) 565, 899, 1171, 2247, 3972
BsmFI GGGAC 3 cut(s) 1732, 2038, 3687
BsmI GAATGC 3 cut(s) 203, 1346, 2274
Bso31I GGTCTC 1 cut(s) 3972
Bsp1286I GDGCHC 3 cut(s) 73, 1942, 2551
Bsp19I CCATGG 2 cut(s) 1725, 3307
BspACI CCGC 3 cut(s) 639, 1922, 3519
BspCNI CTCAG 7 cut(s) 145, 1387, 1589, 1681, 1822, 3020, 3026
BspHI TCATGA 2 cut(s) 1020, 3565
BspLI GGNNCC 3 cut(s) 1314, 2116, 3629
BspMAI CTGCAG 3 cut(s) 742, 2167, 3202
BspMI ACCTGC 1 cut(s) 3232
BspOI GCTAGC 1 cut(s) 3987
BspPI GGATC 7 cut(s) 133, 1737, 1904, 3497, 3497, 3536, 3940
BspQI GCTCTTC 1 cut(s) 1119
BspTNI GGTCTC 1 cut(s) 3972
BsrDI GCAATG 3 cut(s) 558, 692, 3127
BsrI ACTGG 9 cut(s) 459, 499, 886, 1633, 1869, 2263, 3367, 3668, 3968
BssECI CCNNGG 5 cut(s) 121, 1725, 2406, 3307, 3546
BssT1I CCWWGG 3 cut(s) 1725, 3307, 3546
Bst2UI CCWGG 5 cut(s) 123, 222, 798, 2407, 3632
Bst6I CTCTTC 5 cut(s) 1031, 1119, 2046, 2232, 2423
BstAPI GCANNNNNTGC 1 cut(s) 938
BstBAI YACGTR 1 cut(s) 1871
BstC8I GCNNGC 5 cut(s) 2061, 2830, 3702, 3985, 3989
BstDSI CCRYGG 2 cut(s) 1725, 3307
BstEII GGTNACC 1 cut(s) 464
BstF5I GGATG 8 cut(s) 451, 455, 832, 1857, 1912, 2501, 3075, 3492
BstH2I RGCGCY 1 cut(s) 2639
BstHHI GCGC 3 cut(s) 170, 2638, 2799
BstMAI GTCTC 5 cut(s) 565, 899, 1171, 2247, 3972
BstNI CCWGG 5 cut(s) 123, 222, 798, 2407, 3632
BstNSI RCATGY 3 cut(s) 1242, 3181, 3991
BstPI GGTNACC 1 cut(s) 464
BstSCI CCNGG 5 cut(s) 121, 220, 796, 2405, 3630
BstSFI CTRYAG 6 cut(s) 738, 2163, 2736, 3156, 3198, 3414
BstSLI GKGCMC 1 cut(s) 73
BstV2I GAAGAC 3 cut(s) 1270, 1958, 2010
BstX2I RGATCY 4 cut(s) 1077, 1469, 1801, 3502
BstXI CCANNNNNNTGG 2 cut(s) 3344, 3850
BstYI RGATCY 4 cut(s) 1077, 1469, 1801, 3502
BsuI GTATCC 3 cut(s) 1483, 2580, 3831
BtgI CCRYGG 2 cut(s) 1725, 3307
BtsCI GGATG 8 cut(s) 451, 455, 832, 1857, 1912, 2501, 3075, 3492
BtsI GCAGTG 2 cut(s) 1441, 2865
BveI ACCTGC 1 cut(s) 3232
Cac8I GCNNGC 5 cut(s) 2061, 2830, 3702, 3985, 3989
CaiI CAGNNNCTG 3 cut(s) 1208, 1223, 2654
CciI TCATGA 2 cut(s) 1020, 3565
CfoI GCGC 3 cut(s) 170, 2638, 2799
Cfr13I GGNCC 3 cut(s) 873, 3118, 3628
Csp6I GTAC 3 cut(s) 2195, 2732, 3110
CspCI CAANNNNNGTGG 2 cut(s) 1819, 1854
CviQI GTAC 3 cut(s) 2195, 2732, 3110
DraIII CACNNNGTG 1 cut(s) 176
DriI GACNNNNNGTC 1 cut(s) 642
EaeI YGGCCR 3 cut(s) 1843, 2711, 3355
Eam1104I CTCTTC 5 cut(s) 1031, 1119, 2046, 2232, 2423
Eam1105I GACNNNNNGTC 1 cut(s) 642
EarI CTCTTC 5 cut(s) 1031, 1119, 2046, 2232, 2423
Eco130I CCWWGG 3 cut(s) 1725, 3307, 3546
Eco31I GGTCTC 1 cut(s) 3972
Eco32I GATATC 2 cut(s) 735, 1155
Eco47I GGWCC 2 cut(s) 873, 3118
Eco47III AGCGCT 1 cut(s) 2637
Eco57I CTGAAG 7 cut(s) 1064, 1292, 1458, 2004, 2372, 2744, 3731
Eco72I CACGTG 1 cut(s) 1871
Eco91I GGTNACC 1 cut(s) 464
EcoO109I RGGNCCY 1 cut(s) 3628
EcoO65I GGTNACC 1 cut(s) 464
EcoRI GAATTC 2 cut(s) 2912, 3723
EcoRII CCWGG 5 cut(s) 121, 220, 796, 2405, 3630
EcoRV GATATC 2 cut(s) 735, 1155
EcoT14I CCWWGG 3 cut(s) 1725, 3307, 3546
EcoT22I ATGCAT 2 cut(s) 205, 2276
ErhI CCWWGG 3 cut(s) 1725, 3307, 3546
FalI AAGNNNNNCTT 2 cut(s) 2288, 2320
FaqI GGGAC 3 cut(s) 1732, 2038, 3687
FauI CCCGC 1 cut(s) 3512
FauNDI CATATG 3 cut(s) 1660, 3082, 3449
FblI GTMKAC 2 cut(s) 1896, 1980
FokI GGATG 8 cut(s) 438, 442, 839, 1844, 1919, 2508, 3082, 3479
FspAI RTGCGCAY 1 cut(s) 2798
FspI TGCGCA 2 cut(s) 169, 2798
GlaI GCGC 3 cut(s) 169, 2637, 2798
GsuI CTGGAG 4 cut(s) 701, 869, 2874, 3685
HaeII RGCGCY 1 cut(s) 2639
HapII CCGG 2 cut(s) 3042, 3358
HhaI GCGC 3 cut(s) 170, 2638, 2799
Hin6I GCGC 3 cut(s) 168, 2636, 2797
HinP1I GCGC 3 cut(s) 168, 2636, 2797
HincII GTYRAC 2 cut(s) 1981, 2646
HindII GTYRAC 2 cut(s) 1981, 2646
HpaI GTTAAC 1 cut(s) 2646
HpaII CCGG 2 cut(s) 3042, 3358
HphI GGTGA 9 cut(s) 188, 209, 236, 476, 812, 820, 854, 1219, 1546
Hpy166II GTNNAC 6 cut(s) 71, 876, 1897, 1981, 2428, 2646
Hpy8I GTNNAC 6 cut(s) 71, 876, 1897, 1981, 2428, 2646
HpyCH4IV ACGT 5 cut(s) 404, 1870, 2193, 2977, 3481
HpySE526I ACGT 5 cut(s) 404, 1870, 2193, 2977, 3481
HspAI GCGC 3 cut(s) 168, 2636, 2797
KspAI GTTAAC 1 cut(s) 2646
LguI GCTCTTC 1 cut(s) 1119
LmnI GCTCC 9 cut(s) 424, 1312, 1343, 2036, 2047, 2501, 2660, 2855, 3666
MaeII ACGT 5 cut(s) 404, 1870, 2193, 2977, 3481
MfeI CAATTG 5 cut(s) 377, 428, 2222, 3232, 3456
MflI RGATCY 4 cut(s) 1077, 1469, 1801, 3502
MhlI GDGCHC 3 cut(s) 73, 1942, 2551
MlsI TGGCCA 2 cut(s) 1845, 2713
MluNI TGGCCA 2 cut(s) 1845, 2713
MlyI GAGTC 7 cut(s) 265, 677, 708, 759, 781, 1714, 3764
MmeI TCCRAC 5 cut(s) 657, 1386, 1885, 2638, 3530
Mox20I TGGCCA 2 cut(s) 1845, 2713
Mph1103I ATGCAT 2 cut(s) 205, 2276
MroXI GAANNNNTTC 3 cut(s) 351, 369, 1106
MscI TGGCCA 2 cut(s) 1845, 2713
MseI TTAA 8 cut(s) 29, 93, 2091, 2229, 2645, 2969, 3473, 3954
MslI CAYNNNNRTG 3 cut(s) 195, 313, 3848
Msp20I TGGCCA 2 cut(s) 1845, 2713
MspA1I CMGCKG 3 cut(s) 641, 944, 1223
MspI CCGG 2 cut(s) 3042, 3358
MspR9I CCNGG 5 cut(s) 123, 222, 798, 2407, 3632
MunI CAATTG 5 cut(s) 377, 428, 2222, 3232, 3456
Mva1269I GAATGC 3 cut(s) 203, 1346, 2274
MvaI CCWGG 5 cut(s) 123, 222, 798, 2407, 3632
NcoI CCATGG 2 cut(s) 1725, 3307
NdeI CATATG 3 cut(s) 1660, 3082, 3449
NheI GCTAGC 1 cut(s) 3983
NlaIV GGNNCC 3 cut(s) 1314, 2116, 3629
NmuCI GTSAC 6 cut(s) 268, 464, 669, 1225, 1966, 2860
NsbI TGCGCA 2 cut(s) 169, 2798
NsiI ATGCAT 2 cut(s) 205, 2276
NspI RCATGY 3 cut(s) 1242, 3181, 3991
PaeI GCATGC 1 cut(s) 3991
PagI TCATGA 2 cut(s) 1020, 3565
PciSI GCTCTTC 1 cut(s) 1119
PctI GAATGC 3 cut(s) 203, 1346, 2274
PdmI GAANNNNTTC 3 cut(s) 351, 369, 1106
PflFI GACNNNGTC 2 cut(s) 1928, 2815
PflMI CCANNNNNTGG 2 cut(s) 461, 2964
PleI GAGTC 7 cut(s) 265, 676, 708, 759, 781, 1714, 3764
PmaCI CACGTG 1 cut(s) 1871
PmlI CACGTG 1 cut(s) 1871
PpsI GAGTC 7 cut(s) 265, 676, 708, 759, 781, 1714, 3764
Ppu21I YACGTR 1 cut(s) 1871
Psp1406I AACGTT 1 cut(s) 404
Psp6I CCWGG 5 cut(s) 121, 220, 796, 2405, 3630
PspCI CACGTG 1 cut(s) 1871
PspEI GGTNACC 1 cut(s) 464
PspGI CCWGG 5 cut(s) 121, 220, 796, 2405, 3630
PspN4I GGNNCC 3 cut(s) 1314, 2116, 3629
PspPI GGNCC 3 cut(s) 873, 3118, 3628
PstI CTGCAG 3 cut(s) 742, 2167, 3202
PstNI CAGNNNCTG 3 cut(s) 1208, 1223, 2654
PsuI RGATCY 4 cut(s) 1077, 1469, 1801, 3502
PsyI GACNNNGTC 2 cut(s) 1928, 2815
PvuII CAGCTG 2 cut(s) 944, 1223
RsaI GTAC 3 cut(s) 2196, 2733, 3111
RsaNI GTAC 3 cut(s) 2195, 2732, 3110
RseI CAYNNNNRTG 3 cut(s) 195, 313, 3848
SalI GTCGAC 1 cut(s) 1979
SapI GCTCTTC 1 cut(s) 1119
SaqAI TTAA 8 cut(s) 29, 93, 2091, 2229, 2645, 2969, 3473, 3954
Sau96I GGNCC 3 cut(s) 873, 3118, 3628
ScaI AGTACT 1 cut(s) 3111
SchI GAGTC 7 cut(s) 265, 677, 708, 759, 781, 1714, 3764
ScrFI CCNGG 5 cut(s) 123, 222, 798, 2407, 3632
SduI GDGCHC 3 cut(s) 73, 1942, 2551
SfcI CTRYAG 6 cut(s) 738, 2163, 2736, 3156, 3198, 3414
SinI GGWCC 2 cut(s) 873, 3118
SmiMI CAYNNNNRTG 3 cut(s) 195, 313, 3848
SmlI CTYRAG 4 cut(s) 356, 539, 3498, 3584
SmoI CTYRAG 4 cut(s) 356, 539, 3498, 3584
SpeI ACTAGT 1 cut(s) 1493
SphI GCATGC 1 cut(s) 3991
SsiI CCGC 3 cut(s) 639, 1922, 3519
SspI AATATT 4 cut(s) 97, 417, 1708, 2007
StyD4I CCNGG 5 cut(s) 121, 220, 796, 2405, 3630
StyI CCWWGG 3 cut(s) 1725, 3307, 3546
TaiI ACGT 5 cut(s) 407, 1873, 2196, 2980, 3484
TaqI TCGA 8 cut(s) 394, 1980, 2080, 2470, 2487, 2622, 3032, 3540
TatI WGTACW 1 cut(s) 3109
Tru1I TTAA 8 cut(s) 29, 93, 2091, 2229, 2645, 2969, 3473, 3954
Tru9I TTAA 8 cut(s) 29, 93, 2091, 2229, 2645, 2969, 3473, 3954
TseFI GTSAC 6 cut(s) 268, 464, 669, 1225, 1966, 2860
Tsp45I GTSAC 6 cut(s) 268, 464, 669, 1225, 1966, 2860
TspGWI ACGGA 2 cut(s) 1070, 3669
Tth111I GACNNNGTC 2 cut(s) 1928, 2815
Van91I CCANNNNNTGG 2 cut(s) 461, 2964
VneI GTGCAC 1 cut(s) 69
VpaK11BI GGWCC 2 cut(s) 873, 3118
XbaI TCTAGA 2 cut(s) 614, 2980
XceI RCATGY 3 cut(s) 1242, 3181, 3991
XcmI CCANNNNNNNNNTGG 1 cut(s) 3751
XmiI GTMKAC 2 cut(s) 1896, 1980
XmnI GAANNNNTTC 3 cut(s) 351, 369, 1106
ZrmI AGTACT 1 cut(s) 3111
Zsp2I ATGCAT 2 cut(s) 205, 2276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.