Rw7G013140

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0002044
Physical Location & Seq
Forward (+)
12455750 .. 12461143
5394 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G013140.1

Sequence Viewer

Length: 4254 bp
ATGTATCAACAATATTGCGTTGTTTCGGCCACTTTCAATGCCTGTTTGTCTTTGGCCTATTTGGGTTTTGGGATATGGAAAATGGTCGAGAAAGTAAACACAGATCAGACTTTTTTACCTCTGCATGGATGGCTAGTGTTTTTCTTTCAGGGGTTTACTTGGTTTATACTGGGATTAACCATAAACCTAAAGAAGCCACACCCTCCCCACATTGCAATAACAAAAGTGCTTTCAATTCTTGGCTTTTTTATTGCAGTTTTGCTTTGTGGTTCATCAATTTGGGAAACTATTCTTGATGAAGCAGTATCGGTTATGATTGTTTTGAACATTCTTTGTTTCCCTGGATCTGTTCTCTTGCTTTTTAGTGCATTTGAGGGATGCAATGTTGCTAAAGGTGATCCACAAGTCCATGTTGACAATGCTCTGGACACACCTCTGCTGGGTGCAGAATCGGATATCGCAGGTGAAATTACTTCAAATCATGCCAATGTTACTCCTTTTGCAAAAGCTGGTTTATTTAGTAGAATGTCATTTTGGTGGTTGAATCCATTACTGAAAAAAGGAAAGGGGAAGATTCTTGAGAATGAAGATATCCCACAGCTGAGAGAAGCTGATCAAGCACGAACATTGTACTTGATGTTTAAGGAGGAAGTGCAGAAAAGGAAGGAAAACATTTCATCTGATGATGAACCTTCTATTTTGTCCACAATTTTTTTCTGCCAGAGGAAAGCTATTCTGATTTCTGGTATCTTTGCACTCATCAAGGTTCTCACACTGACCAGCGGTCCACTGTTTCTGAGGGCCTTCATTAGGGTTGTTGGAGGAGAAGCAGCTTTTGAAGGTGAAGGCTATGCCCTGACTGCTGGTCTCTTTGTGGTTAAAGTCGTGGAGTCATTGTCGGAGAGGCAATGGTTCTTCAGAACTAGACTTATTGGTCTCCAGGTAAGATCATTGATATCAGCAGCAATATATCAGAAGCAACTAAGACTCTCAAATGCTGCCAAGATGACTCATTCTCCTGGTGAGATAGTGAATTATGTGAGCGTGGATGCTTATAGAATCGGTGAATTTCCATTCTGGTTTCATCAGATATGGTCCACAAGTCTTCAGTTGCTTCTTTCATTACTTATCTTTTACTACTGCGTGGGGATAGCAACTCTTGCAGCTATAACTGTAATCATAGTGACTCTGCTGGGAAGCTCTCCATTAGCAAAGTTGCAGCATGAGTATCAAACTAAGCTCATGGTAGCACAGAACAAGAGGCTGAAGGCCATTACAGAAGCACTTTCCAATATGAAGATTTTGAAGCTGTATTCTTGGGAGACAAATTTCAAGAAGGTCATAGAAGGGTTGAGAACAGAAGAACTCAAATGGATAGCTAAAGTATTGTCACAAAAGGGATATTACAATGTTCTATTCTGGTCATCTCCTATTGTGGTAGCAGCTGTCACTTTTTGGACATGCTACTTCCTGGGATTTACACTCTCTGCTAGTAGTGCTTTCACATTTCTAGCAACTTTACGTATTGTTCAGGAGCCAATCAAGCTGATGCCGGATGTTTTTGGAGCATTTATCGAAGCCAAGGTTTCATTCTCTCGGATCGTGAAGTTCCTTGATGCACCAGAGTTGGAGCACAGAGATACAAGGAAAGGGAGCAGTGAAAAAGAGGTTGAGCATTCCATTTTGTTTAAATCCCTTGAAATTTCATGGGATACTGATGCTACAAAGGCCACATTGAGGGACATCAATTTGGTGGTAAAACCAGGAGAAAAAGTTGCCATTTGTGGTGAGGTTGGCTCAGGAAAATCAACCCTTTTAGCTGCAATTCTCGGTGAAGTGCCACGGATCAATGGTGTTGTTGAAGTATACGGCACAATAGCATATGTATCTCAGTCTGCATGGATCCAAACAGGAACTATACAAGAAAATATACTTTTTGGGACTCCCATGGATCATGTAAGATATCAAGAAACACTTCAAAAGTGTTCCTTGGTAAAGGACCTTGATATGCTTCCATTTGGGGATCGCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGCGGCCAGAAGCAGCGGATTCAACTTGCACGTGCACTCTATCAAAATGCTGATGTCTACCTCTTAGATGACCCTTTCAGTGCAGTTGATGCCCACACTGCGACCAGCCTGTTCAATGAATATGTCATGGGAGCTCTGGCTGAGAAGACAGTTCTGCTTGTCACACACCAAGTTGACTTCCTTCCTGCTTTTCATTCAATCTTGCTGATGTCGTCGGGGGAAATTTTAAAAGCAGCGCCTTATGATGAGTTGCTAACTTCTTGTCATGAGTTCCAAGACCTTGTGAATGCAAACAATGACACTGCTGGTTCAGAGAGGCCAAATGAAAATGCTTCTACAGAAAAATCATCTGCAAAGGAGATTGAGAAAGTAACTACTGAGGTACAGCTACAAGAGTCTGCAGGGGATCAATTGATTAAGAGAGAAGAGAGAGAAACAGGGGACATTGGTTTCAAGCCATACATTCAGTATTTGAAGCAGGGCAGGGGATTTTTCAACTTCTCCTTGTCAATTTTTCTCTACTCGATGTTCATAGTTGGGCAGTTACTTCAGTTTTATTGGTTGGCTTTGAACATTCAGGATTATAGTGTATCCAGAGTCAACCTCTATGCAGTTTATTCTGTGATCATGACTGTCATGATAGTCTCTTTGCTCATTCGATCTTTCTTTATAGTAGATTTAGGAGTTGGGGCAGGAAAGTCCATTTTTTCGACACTACTGAACTCTCTTTTCCGAGCACCAATGTTGTTTTATGACTCGACACCTGTGGGAAGAATACTTAGTCGGGTGTCGTCGGATATGAATATCATTGACCTTGAAGTAGCTTTCAAGTTGATAATTGCTGTTGGGGGAACCTTGAACACATACAGCATATTTCTAGTACTGGTTTATCTTACTTGGCCGATGGTGTTTCTAGTTGTCCCCACAATCTATATTACTATGCTCTTTCAGAACTACTACATGGCTTCTGCAAAAGAGTTGATGCGAATGAATGGCACAACTAAGTCTGCACTTGCAAGCCAGCTTGCCGAATCTATTGCTGGAGCCCTGACAATCAGAGCTTTCAGACAGGAGGACAGATTCTTCACAAAATACTTGGACTTTATCGATGCAAATGCTAGCACTGATTTCCATGGTTTTTCCACAAATGAGTGGTTGATCGAACGCCTGGAATTGCTATGTGCTATTGTTCTCTCAGCTGCAGCACTTGCCATTACTTTAACTACATATTCCTCTTCTTCCTCTGGGTTTATTGGGATGACACTGTCATATGGTCTCTCCTTAAATGTTTTCCTCGTAATTTCTGTCAAATTTCAGTGCATGCTAGCAAATTCAATCATTTCTGTAGAAAGGGTAGAGCAATACATGCATATTCCAAGTGAAGCCGCAGAAGTTATAGAAGACAACCGACCGATGCAAAATTGGCCTACTGTTGGTAAAGTGGAAATACATGATTTAAAGGTTAGATATAGGCCAAATGCTCCTCTCGTTCTTCGTGGGATAACTTGCACAATTGAAGGAGGGTACAAAGTGGGAATTGTTGGCCGGACTGGAAGTGGAAAGACAACTCTTATCAGTGTTTTGTTTCGACTTGTAGAGCCTACAGAGGGAAAGGTCATTGTAGATGGTTATGACATTTGCACAATTGGACTTCACGACTTAAGATCATGTTTTGGGATCATCCCTCAAGATCCCACTCTATTCAGTGGGTCTGTGAGGTTCAATCTAGACCCCTTATCGAAGCATACTGATCATGAGATATGGCAGGTGCTTGAGAAATGTCAGTTACGAGAGGCCATTCAAGAAAAAGCAGAGGGCCTGGATTCTTTAGTTGTACAAGATGGAACAAACTGGAGCATGGGACAGCGACAACTGTTCTGTTTGGGGCGCGCTTTGTTAAAGAGGAGCCGAATACTAGTGCTCGATGAAGCTACTGCATCAATGGACAATGCAACAGACTCTATTCTCCAGAAAACTATAAGAACAGAATTTGCTGACTGCACTGTAATAACAGTGGCACATAGGATACCAACTGTCATGGACTGCACCAAGGTGCTTGCTATTGCTGATGGTAAACTGGTAGAGTATGATGAGCCAACAAAGCTGATGAACAATGAGGGATCATTATTTGGGCAGCTTGTCAAGGAATACTGGTCTCGTTCTGCCAATGTCGGCATCCACTCTGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1417

Amino Acids

158.2

Weight (kDa)

6.0

Isoelectric Point (pI)

32.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 6 - 128 5.2e-44 ABCC10 N-terminal domain
ABC_membrane PF00664 245 - 513 2.2e-24 ABC transporter transmembrane region
ABC_tran PF00005 579 - 713 4.3e-22 ABC transporter
ABC_membrane PF00664 857 - 1111 5.7e-25 ABC transporter transmembrane region
ABC_tran PF00005 1185 - 1333 2.5e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 452, 3817
AasI GACNNNNNNGTC 1 cut(s) 933
Acc36I ACCTGC 2 cut(s) 452, 3817
AccI GTMKAC 2 cut(s) 1866, 2118
AccII CGCG 1 cut(s) 3951
AciI CCGC 4 cut(s) 783, 2064, 2077, 3447
AcoI YGGCCR 4 cut(s) 27, 2065, 2960, 3604
AcsI RAATTY 7 cut(s) 1067, 1327, 1701, 2283, 3371, 3391, 4049
AcuI CTGAAG 4 cut(s) 901, 1091, 1286, 2594
AcvI CACGTG 1 cut(s) 2093
AfaI GTAC 5 cut(s) 632, 2445, 2943, 3587, 3897
AfiI CCNNNNNNNGG 6 cut(s) 125, 440, 810, 1737, 3494, 3668
AflII CTTAAG 1 cut(s) 3721
AhdI GACNNNNNGTC 2 cut(s) 783, 864
AhlI ACTAGT 1 cut(s) 3976
AjnI CCWGG 7 cut(s) 340, 939, 1018, 1470, 1762, 3228, 3879
AjuI GAANNNNNNNTTGG 4 cut(s) 517, 549, 1574, 1606
AleI CACNNNNGTG 1 cut(s) 4112
Alw21I GWGCWC 5 cut(s) 1635, 2098, 2197, 2800, 3984
Alw26I GTCTC 6 cut(s) 872, 941, 1316, 2710, 3341, 4221
Alw44I GTGCAC 1 cut(s) 2094
ApaLI GTGCAC 1 cut(s) 2094
ApoI RAATTY 7 cut(s) 1067, 1327, 1701, 2283, 3371, 3391, 4049
Asp700I GAANNNNTTC 2 cut(s) 288, 1974
AspLEI GCGC 3 cut(s) 2299, 3951, 3953
AspS9I GGNCC 5 cut(s) 785, 801, 1095, 1999, 3877
AsuHPI GGTGA 7 cut(s) 407, 476, 854, 1034, 1076, 1799, 1844
AsuNHI GCTAGC 2 cut(s) 3179, 3385
AvaII GGWCC 3 cut(s) 785, 1095, 1999
BaeGI GKGCMC 1 cut(s) 2098
BamHI GGATCC 1 cut(s) 1902
BanII GRGCYC 2 cut(s) 2197, 3109
BbrPI CACGTG 1 cut(s) 2093
BbsI GAAGAC 3 cut(s) 1097, 2213, 3468
Bbv12I GWGCWC 5 cut(s) 1635, 2098, 2197, 2800, 3984
BccI CCATC 5 cut(s) 123, 2959, 3680, 3896, 4124
BceAI ACGGC 1 cut(s) 1885
BcgI CGANNNNNNTGC 4 cut(s) 3080, 3114, 3158, 3192
BciT130I CCWGG 7 cut(s) 342, 941, 1020, 1472, 1764, 3230, 3881
BciVI GTATCC 3 cut(s) 1705, 2662, 4080
BclI TGATCA 3 cut(s) 613, 2685, 3811
BcoDI GTCTC 6 cut(s) 872, 941, 1316, 2710, 3341, 4221
BcuI ACTAGT 1 cut(s) 3976
BfmI CTRYAG 5 cut(s) 2397, 2460, 3261, 3405, 3663
BfoI RGCGCY 1 cut(s) 2300
BfrI CTTAAG 1 cut(s) 3721
BfuAI ACCTGC 2 cut(s) 452, 3817
BfuI GTATCC 3 cut(s) 1705, 2662, 4080
BmcAI AGTACT 1 cut(s) 2943
Bme1390I CCNGG 7 cut(s) 342, 941, 1020, 1472, 1764, 3230, 3881
Bme18I GGWCC 3 cut(s) 785, 1095, 1999
BmeRI GACNNNNNGTC 2 cut(s) 783, 864
BmgT120I GGNCC 5 cut(s) 785, 801, 1095, 1999, 3877
BmiI GGNNCC 5 cut(s) 1536, 1904, 2914, 3106, 3968
BmrFI CCNGG 7 cut(s) 342, 941, 1020, 1472, 1764, 3230, 3881
BmrI ACTGGG 1 cut(s) 179
BmtI GCTAGC 2 cut(s) 3183, 3389
BmuI ACTGGG 1 cut(s) 179
BpiI GAAGAC 3 cut(s) 1097, 2213, 3468
BplI GAGNNNNNCTC 4 cut(s) 1781, 1813, 2649, 2681
BpmI CTGGAG 4 cut(s) 923, 3123, 3934, 4013
Bpu10I CCTNAGC 1 cut(s) 1798
BpuEI CTTGAG 3 cut(s) 599, 3732, 3854
Bsa29I ATCGAT 1 cut(s) 3168
BsaAI YACGTR 2 cut(s) 1523, 2093
BsaI GGTCTC 4 cut(s) 872, 941, 3341, 4221
BsaJI CCNNGG 8 cut(s) 340, 1471, 1581, 1841, 1947, 1989, 3193, 4110
BsaXI ACNNNNNCTCC 6 cut(s) 881, 911, 1000, 1030, 1758, 1788
Bsc4I CCNNNNNNNGG 6 cut(s) 125, 440, 810, 1737, 3494, 3668
Bse1I ACTGG 6 cut(s) 174, 2949, 3616, 3917, 4143, 4217
Bse3DI GCAATG 3 cut(s) 210, 388, 914
BseBI CCWGG 7 cut(s) 342, 941, 1020, 1472, 1764, 3230, 3881
BseCI ATCGAT 1 cut(s) 3168
BseDI CCNNGG 8 cut(s) 340, 1471, 1581, 1841, 1947, 1989, 3193, 4110
BseGI GGATG 7 cut(s) 134, 383, 1054, 1561, 3324, 3741, 4236
BseLI CCNNNNNNNGG 6 cut(s) 125, 440, 810, 1737, 3494, 3668
BseMI GCAATG 3 cut(s) 210, 388, 914
BseMII CTCAG 8 cut(s) 593, 788, 1812, 1904, 2045, 2193, 2430, 3270
BseNI ACTGG 6 cut(s) 174, 2949, 3616, 3917, 4143, 4217
BsePI GCGCGC 1 cut(s) 3949
BseRI GAGGAG 3 cut(s) 837, 3534, 3979
BseSI GKGCMC 1 cut(s) 2098
BseYI CCCAGC 2 cut(s) 439, 1192
BsgI GTGCAG 6 cut(s) 465, 674, 2163, 3054, 4045, 4090
Bsh1236I CGCG 1 cut(s) 3951
Bsh1285I CGRYCG 1 cut(s) 3473
BshVI ATCGAT 1 cut(s) 3168
BsiEI CGRYCG 1 cut(s) 3473
BsiHKAI GWGCWC 5 cut(s) 1635, 2098, 2197, 2800, 3984
BsiSI CCGG 2 cut(s) 1553, 3607
BslFI GGGAC 5 cut(s) 1754, 1954, 2516, 2966, 3936
BslI CCNNNNNNNGG 6 cut(s) 125, 440, 810, 1737, 3494, 3668
BsmAI GTCTC 6 cut(s) 872, 941, 1316, 2710, 3341, 4221
BsmFI GGGAC 5 cut(s) 1754, 1954, 2516, 2966, 3936
BsmI GAATGC 2 cut(s) 1675, 2353
Bso31I GGTCTC 4 cut(s) 872, 941, 3341, 4221
Bsp1286I GDGCHC 6 cut(s) 1635, 2098, 2197, 2800, 3109, 3984
Bsp1407I TGTACA 1 cut(s) 3895
Bsp19I CCATGG 2 cut(s) 1947, 3193
BspACI CCGC 4 cut(s) 783, 2064, 2077, 3447
BspCNI CTCAG 8 cut(s) 594, 789, 1811, 1903, 2044, 2194, 2431, 3269
BspDI ATCGAT 1 cut(s) 3168
BspFNI CGCG 1 cut(s) 3951
BspHI TCATGA 4 cut(s) 2326, 2688, 2697, 3814
BspLI GGNNCC 5 cut(s) 1536, 1904, 2914, 3106, 3968
BspMAI CTGCAG 2 cut(s) 2464, 3265
BspMI ACCTGC 2 cut(s) 452, 3817
BspOI GCTAGC 2 cut(s) 3183, 3389
BspTI CTTAAG 1 cut(s) 3721
BspTNI GGTCTC 4 cut(s) 872, 941, 3341, 4221
BsrDI GCAATG 3 cut(s) 210, 388, 914
BsrGI TGTACA 1 cut(s) 3895
BsrI ACTGG 6 cut(s) 174, 2949, 3616, 3917, 4143, 4217
BssECI CCNNGG 8 cut(s) 340, 1471, 1581, 1841, 1947, 1989, 3193, 4110
BssHII GCGCGC 1 cut(s) 3949
BssNAI GTATAC 1 cut(s) 1867
BssT1I CCWWGG 5 cut(s) 1581, 1947, 1989, 3193, 4110
Bst1107I GTATAC 1 cut(s) 1867
Bst2UI CCWGG 7 cut(s) 342, 941, 1020, 1472, 1764, 3230, 3881
Bst6I CTCTTC 2 cut(s) 2481, 3301
BstAFI CTTAAG 1 cut(s) 3721
BstAPI GCANNNNNTGC 4 cut(s) 1160, 2150, 3269, 3427
BstAUI TGTACA 1 cut(s) 3895
BstBAI YACGTR 2 cut(s) 1523, 2093
BstC8I GCNNGC 8 cut(s) 3079, 3083, 3087, 3181, 3383, 3387, 3951, 4119
BstDSI CCRYGG 3 cut(s) 1841, 1947, 3193
BstENI CCTNNNNNAGG 1 cut(s) 808
BstF5I GGATG 7 cut(s) 134, 383, 1054, 1561, 3324, 3741, 4236
BstFNI CGCG 1 cut(s) 3951
BstH2I RGCGCY 1 cut(s) 2300
BstHHI GCGC 3 cut(s) 2299, 3951, 3953
BstMAI GTCTC 6 cut(s) 872, 941, 1316, 2710, 3341, 4221
BstMCI CGRYCG 1 cut(s) 3473
BstNI CCWGG 7 cut(s) 342, 941, 1020, 1472, 1764, 3230, 3881
BstNSI RCATGY 3 cut(s) 1464, 3385, 3430
BstSCI CCNGG 7 cut(s) 340, 939, 1018, 1470, 1762, 3228, 3879
BstSFI CTRYAG 5 cut(s) 2397, 2460, 3261, 3405, 3663
BstSLI GKGCMC 1 cut(s) 2098
BstSNI TACGTA 1 cut(s) 1523
BstUI CGCG 1 cut(s) 3951
BstV2I GAAGAC 3 cut(s) 1097, 2213, 3468
BstX2I RGATCY 3 cut(s) 344, 1902, 3751
BstYI RGATCY 3 cut(s) 344, 1902, 3751
BstZ17I GTATAC 1 cut(s) 1867
Bsu15I ATCGAT 1 cut(s) 3168
BsuI GTATCC 3 cut(s) 1705, 2662, 4080
BsuTUI ATCGAT 1 cut(s) 3168
BtgI CCRYGG 3 cut(s) 1841, 1947, 3193
BtsCI GGATG 7 cut(s) 134, 383, 1054, 1561, 3324, 3741, 4236
BtsI GCAGTG 3 cut(s) 1663, 2157, 2361
BveI ACCTGC 2 cut(s) 452, 3817
Cac8I GCNNGC 8 cut(s) 3079, 3083, 3087, 3181, 3383, 3387, 3951, 4119
CciI TCATGA 4 cut(s) 2326, 2688, 2697, 3814
CfoI GCGC 3 cut(s) 2299, 3951, 3953
Cfr13I GGNCC 5 cut(s) 785, 801, 1095, 1999, 3877
ClaI ATCGAT 1 cut(s) 3168
Csp6I GTAC 5 cut(s) 631, 2444, 2942, 3586, 3896
CspCI CAANNNNNGTGG 2 cut(s) 2041, 2076
CviQI GTAC 5 cut(s) 631, 2444, 2942, 3586, 3896
DraI TTTAAA 3 cut(s) 1690, 2289, 3519
DrdI GACNNNNNNGTC 1 cut(s) 933
DriI GACNNNNNGTC 2 cut(s) 783, 864
DseDI GACNNNNNNGTC 1 cut(s) 933
EaeI YGGCCR 4 cut(s) 27, 2065, 2960, 3604
Eam1104I CTCTTC 2 cut(s) 2481, 3301
Eam1105I GACNNNNNGTC 2 cut(s) 783, 864
EarI CTCTTC 2 cut(s) 2481, 3301
Ecl136II GAGCTC 1 cut(s) 2195
Eco105I TACGTA 1 cut(s) 1523
Eco130I CCWWGG 5 cut(s) 1581, 1947, 1989, 3193, 4110
Eco24I GRGCYC 2 cut(s) 2197, 3109
Eco31I GGTCTC 4 cut(s) 872, 941, 3341, 4221
Eco32I GATATC 4 cut(s) 457, 592, 957, 1964
Eco47I GGWCC 3 cut(s) 785, 1095, 1999
Eco53kI GAGCTC 1 cut(s) 2195
Eco57I CTGAAG 4 cut(s) 901, 1091, 1286, 2594
Eco72I CACGTG 1 cut(s) 2093
EcoICRI GAGCTC 1 cut(s) 2195
EcoNI CCTNNNNNAGG 1 cut(s) 808
EcoO109I RGGNCCY 3 cut(s) 801, 1999, 3877
EcoRII CCWGG 7 cut(s) 340, 939, 1018, 1470, 1762, 3228, 3879
EcoRV GATATC 4 cut(s) 457, 592, 957, 1964
EcoT14I CCWWGG 5 cut(s) 1581, 1947, 1989, 3193, 4110
EcoT22I ATGCAT 1 cut(s) 3432
EcoT38I GRGCYC 2 cut(s) 2197, 3109
ErhI CCWWGG 5 cut(s) 1581, 1947, 1989, 3193, 4110
FalI AAGNNNNNCTT 4 cut(s) 1959, 1991, 1973, 2005
FaqI GGGAC 5 cut(s) 1754, 1954, 2516, 2966, 3936
FauNDI CATATG 2 cut(s) 1882, 3331
FbaI TGATCA 3 cut(s) 613, 2685, 3811
FblI GTMKAC 2 cut(s) 1866, 2118
FokI GGATG 7 cut(s) 141, 390, 1061, 1568, 3331, 3728, 4223
FriOI GRGCYC 2 cut(s) 2197, 3109
GlaI GCGC 3 cut(s) 2298, 3950, 3952
GsaI CCCAGC 2 cut(s) 443, 1196
GsuI CTGGAG 4 cut(s) 923, 3123, 3934, 4013
HaeII RGCGCY 1 cut(s) 2300
HapII CCGG 2 cut(s) 1553, 3607
HhaI GCGC 3 cut(s) 2299, 3951, 3953
Hin6I GCGC 3 cut(s) 2297, 3949, 3951
HinP1I GCGC 3 cut(s) 2297, 3949, 3951
HincII GTYRAC 3 cut(s) 415, 2236, 2662
HindII GTYRAC 3 cut(s) 415, 2236, 2662
HpaII CCGG 2 cut(s) 1553, 3607
HphI GGTGA 7 cut(s) 407, 476, 854, 1034, 1076, 1799, 1844
Hpy99I CGWCG 2 cut(s) 2278, 2857
HpyCH4IV ACGT 2 cut(s) 1522, 2092
HpySE526I ACGT 2 cut(s) 1522, 2092
HspAI GCGC 3 cut(s) 2297, 3949, 3951
Ksp22I TGATCA 3 cut(s) 613, 2685, 3811
LmnI GCTCC 9 cut(s) 1534, 1565, 1630, 1653, 2192, 3104, 3547, 3915, 3966
MaeII ACGT 2 cut(s) 1522, 2092
MaeIII GTNAC 8 cut(s) 490, 1183, 1389, 1447, 2221, 2431, 2604, 3846
MfeI CAATTG 3 cut(s) 2471, 3573, 3705
MflI RGATCY 3 cut(s) 344, 1902, 3751
MhlI GDGCHC 6 cut(s) 1635, 2098, 2197, 2800, 3109, 3984
MlyI GAGTC 9 cut(s) 899, 981, 1003, 1180, 1936, 2465, 2667, 2810, 4013
MmeI TCCRAC 4 cut(s) 799, 879, 1608, 2835
Mph1103I ATGCAT 1 cut(s) 3432
MroXI GAANNNNTTC 2 cut(s) 288, 1974
MslI CAYNNNNRTG 3 cut(s) 486, 535, 4112
MspA1I CMGCKG 5 cut(s) 601, 783, 1445, 2077, 3260
MspCI CTTAAG 1 cut(s) 3721
MspI CCGG 2 cut(s) 1553, 3607
MspR9I CCNGG 7 cut(s) 342, 941, 1020, 1472, 1764, 3230, 3881
MunI CAATTG 3 cut(s) 2471, 3573, 3705
Mva1269I GAATGC 2 cut(s) 1675, 2353
MvaI CCWGG 7 cut(s) 342, 941, 1020, 1472, 1764, 3230, 3881
MvnI CGCG 1 cut(s) 3951
NcoI CCATGG 2 cut(s) 1947, 3193
NdeI CATATG 2 cut(s) 1882, 3331
NheI GCTAGC 2 cut(s) 3179, 3385
NlaIV GGNNCC 5 cut(s) 1536, 1904, 2914, 3106, 3968
NmuCI GTSAC 4 cut(s) 1183, 1389, 1447, 2221
NsiI ATGCAT 1 cut(s) 3432
NspI RCATGY 3 cut(s) 1464, 3385, 3430
OliI CACNNNNGTG 1 cut(s) 4112
PaeI GCATGC 1 cut(s) 3385
PagI TCATGA 4 cut(s) 2326, 2688, 2697, 3814
PaqCI CACCTGC 2 cut(s) 452, 3817
PauI GCGCGC 1 cut(s) 3949
PctI GAATGC 2 cut(s) 1675, 2353
PdmI GAANNNNTTC 2 cut(s) 288, 1974
PfeI GAWTC 8 cut(s) 449, 544, 574, 1059, 2080, 3092, 3141, 3884
PflFI GACNNNGTC 1 cut(s) 3325
PleI GAGTC 9 cut(s) 898, 981, 1003, 1180, 1936, 2464, 2666, 2810, 4013
PmaCI CACGTG 1 cut(s) 2093
PmlI CACGTG 1 cut(s) 2093
PpsI GAGTC 9 cut(s) 898, 981, 1003, 1180, 1936, 2464, 2666, 2810, 4013
Ppu21I YACGTR 2 cut(s) 1523, 2093
PpuMI RGGWCCY 1 cut(s) 1999
Psp124BI GAGCTC 1 cut(s) 2197
Psp5II RGGWCCY 1 cut(s) 1999
Psp6I CCWGG 7 cut(s) 340, 939, 1018, 1470, 1762, 3228, 3879
PspCI CACGTG 1 cut(s) 2093
PspFI CCCAGC 2 cut(s) 439, 1192
PspGI CCWGG 7 cut(s) 340, 939, 1018, 1470, 1762, 3228, 3879
PspN4I GGNNCC 5 cut(s) 1536, 1904, 2914, 3106, 3968
PspPI GGNCC 5 cut(s) 785, 801, 1095, 1999, 3877
PspPPI RGGWCCY 1 cut(s) 1999
PstI CTGCAG 2 cut(s) 2464, 3265
PsuI RGATCY 3 cut(s) 344, 1902, 3751
PsyI GACNNNGTC 1 cut(s) 3325
PteI GCGCGC 1 cut(s) 3949
PvuII CAGCTG 3 cut(s) 601, 1445, 3260
RsaI GTAC 5 cut(s) 632, 2445, 2943, 3587, 3897
RsaNI GTAC 5 cut(s) 631, 2444, 2942, 3586, 3896
RseI CAYNNNNRTG 3 cut(s) 486, 535, 4112
SacI GAGCTC 1 cut(s) 2197
Sau96I GGNCC 5 cut(s) 785, 801, 1095, 1999, 3877
ScaI AGTACT 1 cut(s) 2943
SchI GAGTC 9 cut(s) 899, 981, 1003, 1180, 1936, 2465, 2667, 2810, 4013
ScrFI CCNGG 7 cut(s) 342, 941, 1020, 1472, 1764, 3230, 3881
SduI GDGCHC 6 cut(s) 1635, 2098, 2197, 2800, 3109, 3984
SfcI CTRYAG 5 cut(s) 2397, 2460, 3261, 3405, 3663
SinI GGWCC 3 cut(s) 785, 1095, 1999
SmiMI CAYNNNNRTG 3 cut(s) 486, 535, 4112
SmlI CTYRAG 4 cut(s) 578, 3721, 3747, 3833
SmoI CTYRAG 4 cut(s) 578, 3721, 3747, 3833
SnaBI TACGTA 1 cut(s) 1523
SpeI ACTAGT 1 cut(s) 3976
SphI GCATGC 1 cut(s) 3385
SsiI CCGC 4 cut(s) 783, 2064, 2077, 3447
SspI AATATT 1 cut(s) 14
SstI GAGCTC 1 cut(s) 2197
StyD4I CCNGG 7 cut(s) 340, 939, 1018, 1470, 1762, 3228, 3879
StyI CCWWGG 5 cut(s) 1581, 1947, 1989, 3193, 4110
TaiI ACGT 2 cut(s) 1525, 2095
TaqII GACCGA 1 cut(s) 3487
TatI WGTACW 3 cut(s) 630, 2941, 3895
TauI GCSGC 2 cut(s) 2067, 3449
TfiI GAWTC 8 cut(s) 449, 544, 574, 1059, 2080, 3092, 3141, 3884
TseFI GTSAC 4 cut(s) 1183, 1389, 1447, 2221
Tsp45I GTSAC 4 cut(s) 1183, 1389, 1447, 2221
TspGWI ACGGA 1 cut(s) 1858
Tth111I GACNNNGTC 1 cut(s) 3325
Vha464I CTTAAG 1 cut(s) 3721
VneI GTGCAC 1 cut(s) 2094
VpaK11BI GGWCC 3 cut(s) 785, 1095, 1999
XagI CCTNNNNNAGG 1 cut(s) 808
XapI RAATTY 7 cut(s) 1067, 1327, 1701, 2283, 3371, 3391, 4049
XbaI TCTAGA 1 cut(s) 3787
XceI RCATGY 3 cut(s) 1464, 3385, 3430
XmiI GTMKAC 2 cut(s) 1866, 2118
XmnI GAANNNNTTC 2 cut(s) 288, 1974
ZrmI AGTACT 1 cut(s) 2943
Zsp2I ATGCAT 1 cut(s) 3432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.