RLG00000004093

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0002044
Physical Location & Seq
Reverse (-)
56133654 .. 56139151
5498 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004093

Sequence Viewer

Length: 4233 bp
ATGGCGGAAGGTTACTGGACCTTGTTCTGTGATTGTTCAACTGAGTCTGGAATTGAATGCAGTTCTGACATTGCAGCCATTATCAATCCAGATTCATGTATCAACAATATTGCGGTCATTGCAGTTGATATCTTGCTTCTATTCATCTTGTTTTGTATCTTCATCTATAGATTATCAAAGAAGGTTATAGCATCATCAGAGTCTTACACCTTCTCTGCTGTGTCAATTGTTTCAGCCACTTTCAATGCCTGTTTGTCTTTGGCCTATTTGGGTTTTGGGATATGGAAAACGGTCGAGAAAGTAAACACAGATCAGACTTTTTTACCTCTGCATGGATGGCTAGTGTTTTTCTTTCAGGGGTTTACTTGGCTTGTGCTGGGATTAACCATAAACCTAAAGAAGCCACACCCTCCCCACATTGCAATAACAAAAGTTCTTTCAATTCTTGGCTTTTTTATTGCAGTTTTTCTTTGTGGTTCATCAATTTGGGAAGCTATTCTTGATGAAGCAGTATCGGTTATGATTGTTTTGAACATTCTTTGTTTCCCTGGATCAGTTCTCTTGCTTTTTAGTGCATTTGAGGGATACAATGTTGCTAAAGGTGATCCACAAGTCCATGTTGACGATGCTCTGGACACGCCTTTGCTGGGTGCAGAATCGGATATTGCAGCTGAAATTACTTCAAATCATGACAATAGGAAAGCTATTCTGATTTCTGGTATCTTTGCACTCATCAAGGTTCTCACACTGACCAGCGGTCCACTGTTTCTGAGGGCCTTCATTAGGGTTGTTGGAGGAGAAGCAGCTTTTGAAGGTGAAGGCTATGCCCTGACTGCTGGTCTCTTTGTGGTTAAAGTCGTGGAGTCATTGTCGGAGAGGCAATGGTTCTTCAGAACTAGACTTATTGGTCTCCAGGTAAGATCATTGATATCAGCAGCAATATATCAGAAGCAACTAAGACTCTCAAATGCTGCCAAGATGACTCATTCTCCTGGTGAGATAGTGAATTATGTGAGCGTGGATGCTTATAGAATCGGTGAATTTCCATTCTGGTTTCATCAGATATGGTCCACAAGTCTTCAGTTGCTTCTTTCATTACTTATCTTTTACTACTGCGTGGGGATAGCAACTCTTGCAGCTATAACTGTAATCATAGTGACTCTGCTGGGAAGCTCTCCATTAGCAAAGTTGCAGCATGAGTATCAAACTAGGCTCATGGTAGCACAGAACAAGAGGCTGAAGGCCATTACAGAAGCACTTTCCAATATGAAGATTTTGAAGCTGTATTCTTGGGAGACAAATTTCAAGAAGGTCATAGAAGGGTTGAGAACAGAAGAACTCAAATGGATAGCTAAAGTACTGTCACAAAAGGGATATTATAATGTTCTATTCTGGTCATCTCCTATTGTGGTAGCAGCTGTCACTTTTTGGACATGCTACTTCCTGGGATTTACACTCTCTGCTAGTAGTGCTTTCACATTTCTAGCAACTTTACGTATTGTTCAGGAGCCAATCAAGCTGATGCCGGATGTTTTTGGAGCATTTATCGAAGCCAAGGTTTCATTCTCTCGGATCGTGACGTTCCTTGATGCACCAGAGTTGGAGCACAGAGATACAAGGAAAGAGAGCAGTGTAAAAGAGGTTGAGCATTCCATTTTGTTTAAATCCTTTGAAATTTCATGGGATACTGATGCTACAAAGGCCACATTGAGGGACATCAATTTGGTGGTAAAACCAGGAGAAAAAGTTGCTATTTGTGGTGAGGTTGGCTCAGGAAAATCAACCCTTTTAGCTGCAATTCTCGGTGAAGTTCCACGGATCAATGGTGTTGTTGAAGTATACGGCACAATAGCATATGTATCTCAGTCTGCATGGATCCAAACAGGAACTATACAAGAAAATATACTGTTTGGGACTCCCATGGATCATGTAAGATATCAAGAAACACTTCAAAAGTGTTCCTTGGTAAAGGACCTTGATATGCTTCCATTTGGGGATCGCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGCGGCCAGAAGCAGCGGATTCAACTTGCACGTGCACTCTATCAAAATGCTGATGTCTACCTCTTAGATGACCCTTTCAGCGCAGTTGATGCCCACACTGCGACCAGCCTGTTCAATGAATATGTCATGGGAGCTCTGGCTGAGAAGACAGTTCTGCTTGTCACACACCAAGTTGACTTCCTTCCTGCTTTTCATTCAATCTTGTTGATGTCGTCGGGGGAAATTTTAAAAGCAGCGCCTTATGAAGAGTTGCTAGCTTCTTGTCATGAGTTCCAAGACCTTGTGAATGCAAACAATGACACTGCTGGTTCAGAGAGGCCAAATGAAAATTCTTCTACAGAAAAACTTAAATCATCTGCAAAGGAGATTGAGAAAGTAACTACTGAGGTACAGCTACAAGAGTCTGCAGGGGATCAATTGATTAAGAGAGAAGAGAGAGAAACAGGGGACATTGGTTTCAAGCCATACATTCAGTATTTGAAGCAGGGCAGGGGATTTTTCAACTTCTCCTTGTCAATTTTTCTCTATTCGATGTTCATAGTTGGGCAGTTACTTCAATTTTATTGGTTGGCTTTGAACATTCAGGATTATAGTGTATCCAGAGTCAAACTCTATGCAGTTTATTCTGTGATCATGACTGTCATGATAGTCTCTTTGCTCATTCGATCTTTCTTTATAGTAGATTTAGGAGTAGGGGCAGGAAAGTCCATTTTTTCGACACTACTGAACTCTCTTTTCCGAGCACCAATGTTGTTTTATGACTCAACACCTGTGGGAAGAATACTTAGTCGGGTGTCGTCAGATATGAATATCATTGACCTTGAAGTAGCTTTCAAGTTGATAATTGCTGTTGGGGGAACCTTGAACACATACAGCATATTTCTAGTACTGGTTTATCTTACTTGGCCGATGGTGTTTCTAGTTGTCCCCACAATCTATATTACTATGCTCTTTCAGAACTACTACATGGCTTCTGCAAAAGAGTTGATGCGAATGAATGGCACAACTAAGTCTGCACTTGCAAGCCAGCTTGCCGAATCTATTGCTGGAGCCCTGACAATCAGAGCTTTCAGACAGGAGGACAGATTCTTCACAAAATACTTGGACTTTATCGATGCAAATGCTAGCACTGATTTTCATGGTTTTTCCACAAATGAGTGGTTGATCGAACGCCTGGAATTGCTATGTGCTATTGTTCTCTCAGCTGCAGCACTTGCTATTACTTTAACTCCATATTCCTCTTCTTCCTCTGGGTTTATTGGGATGACACTGTCATATGGTCTCTCCTTAAATGTTTTCCTCGTAATTTCTGTCAAATTTCAGTGCATGCTAGCAAATTCAATCATTTCTGTAGAAAGGGTAGAGCAATACATGCATATTCCAAGTGAAGCCGCAGAAGTAATAGAAGACAATCGACCGATGCAAAACTGGCCTACTGTTGGTAAAGTGGAAATATATGATTTAAAGGTTAGATATAGGCCAAATGCTCCTCTCGTTCTTCGTGGGATAACTTGCACAATTGAAGGAGGGTACAAAGTTGGAATTGTTGGCAGGACTGGAAGTGGAAAGACAACTCTTATCAGCGTTTTGTTTCGACTTGTAGAGCCTACAGAGGGAAAGGTCATTGTAGATGGTTATGACATTTGCACAATTGGACTTCATGACTTAAGATCATGTTTTGGGATCATCCCTCAAGATCCAACTCTATTCAGTGGGTCTGTGAGGTTCAATCTAGACCCCTTATCCAAGCATACTGATCATGAGATATGGCAGGTGCTTGAGAAATGTCAGTTACGAGAGGCCATTCAAGAAAAAGCAGAGGGCCTGGATTCTTTAGTTGTACAAGATGGAACAAACTGGAGCATGGGACAGCGACAACTGTTCTGTTTGGGGCGCGCTTTGTTAAAGAGGAGCCGAATACTAGTGCTTGATGAAGCCACTGCATCAATGGACAATGCAACAGACTCTATTCTCCAGAAAACTATAAGAACAGAATTTGCTGACTGCACTGTAATAACAGTGGCACATAGGATACCAACTGTCATGGACTGCACCAAGGTGCTTGCTATTGCTGATGGTAAACTGGTAGAGTATGATGAGCCAACAAAGCTGATGAACAATGAGGGATCATTATTTGGGCAGCTTGTCAAGGAATACTGGTCTCGTTCTGCCAATGTCGGCATCCACTCTGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1411

Amino Acids

156.89

Weight (kDa)

5.66

Isoelectric Point (pI)

32.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 3 - 197 5.7e-69 ABCC10 N-terminal domain
ABC_membrane PF00664 236 - 504 3.2e-24 ABC transporter transmembrane region
ABC_tran PF00005 570 - 704 4.3e-22 ABC transporter
ABC_membrane PF00664 850 - 1097 3.1e-25 ABC transporter transmembrane region
ABC_tran PF00005 1178 - 1326 2.5e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1380
AarI CACCTGC 1 cut(s) 3796
AasI GACNNNNNNGTC 1 cut(s) 906
Acc36I ACCTGC 1 cut(s) 3796
AccI GTMKAC 2 cut(s) 1839, 2091
AccII CGCG 1 cut(s) 3930
AciI CCGC 6 cut(s) 5, 113, 756, 2037, 2050, 3426
AcoI YGGCCR 2 cut(s) 2038, 2939
AcsI RAATTY 8 cut(s) 1040, 1300, 1674, 2256, 2362, 3350, 3370, 4028
AcuI CTGAAG 3 cut(s) 874, 1064, 1259
AcvI CACGTG 1 cut(s) 2066
AfaI GTAC 5 cut(s) 1359, 2424, 2922, 3566, 3876
AfiI CCNNNNNNNGG 6 cut(s) 332, 647, 783, 1710, 3473, 3647
AflII CTTAAG 1 cut(s) 3700
AhdI GACNNNNNGTC 2 cut(s) 756, 837
AhlI ACTAGT 1 cut(s) 3955
AjnI CCWGG 7 cut(s) 547, 912, 991, 1443, 1735, 3207, 3858
AjuI GAANNNNNNNTTGG 4 cut(s) 1547, 1579, 2347, 2379
AleI CACNNNNGTG 1 cut(s) 4091
Alw21I GWGCWC 4 cut(s) 1608, 2071, 2170, 2779
Alw26I GTCTC 6 cut(s) 845, 914, 1289, 2689, 3320, 4200
Alw44I GTGCAC 1 cut(s) 2067
ApaLI GTGCAC 1 cut(s) 2067
ApoI RAATTY 8 cut(s) 1040, 1300, 1674, 2256, 2362, 3350, 3370, 4028
Asp700I GAANNNNTTC 2 cut(s) 495, 1947
AspLEI GCGC 4 cut(s) 2117, 2272, 3930, 3932
AspS9I GGNCC 6 cut(s) 18, 758, 774, 1068, 1972, 3856
AsuHPI GGTGA 6 cut(s) 614, 827, 1007, 1049, 1772, 1817
AsuNHI GCTAGC 3 cut(s) 2287, 3158, 3364
AvaII GGWCC 4 cut(s) 18, 758, 1068, 1972
BaeGI GKGCMC 1 cut(s) 2071
BamHI GGATCC 1 cut(s) 1875
BanII GRGCYC 2 cut(s) 2170, 3088
BbrPI CACGTG 1 cut(s) 2066
BbsI GAAGAC 3 cut(s) 1070, 2186, 3447
Bbv12I GWGCWC 4 cut(s) 1608, 2071, 2170, 2779
BccI CCATC 5 cut(s) 330, 2938, 3659, 3875, 4103
BceAI ACGGC 1 cut(s) 1858
BcgI CGANNNNNNTGC 4 cut(s) 3059, 3093, 3137, 3171
BciT130I CCWGG 7 cut(s) 549, 914, 993, 1445, 1737, 3209, 3860
BciVI GTATCC 4 cut(s) 578, 1678, 2641, 4059
BclI TGATCA 2 cut(s) 2664, 3790
BcoDI GTCTC 6 cut(s) 845, 914, 1289, 2689, 3320, 4200
BcuI ACTAGT 1 cut(s) 3955
BfmI CTRYAG 6 cut(s) 166, 2370, 2439, 3240, 3384, 3642
BfoI RGCGCY 1 cut(s) 2273
BfrI CTTAAG 1 cut(s) 3700
BfuAI ACCTGC 1 cut(s) 3796
BfuI GTATCC 4 cut(s) 578, 1678, 2641, 4059
BmcAI AGTACT 2 cut(s) 1359, 2922
Bme1390I CCNGG 7 cut(s) 549, 914, 993, 1445, 1737, 3209, 3860
Bme18I GGWCC 4 cut(s) 18, 758, 1068, 1972
BmeRI GACNNNNNGTC 2 cut(s) 756, 837
BmgT120I GGNCC 6 cut(s) 18, 758, 774, 1068, 1972, 3856
BmiI GGNNCC 5 cut(s) 1509, 1877, 2893, 3085, 3947
BmrFI CCNGG 7 cut(s) 549, 914, 993, 1445, 1737, 3209, 3860
BmtI GCTAGC 3 cut(s) 2291, 3162, 3368
BpiI GAAGAC 3 cut(s) 1070, 2186, 3447
BplI GAGNNNNNCTC 4 cut(s) 1754, 1786, 2628, 2660
BpmI CTGGAG 4 cut(s) 896, 3102, 3913, 3992
Bpu10I CCTNAGC 1 cut(s) 1771
BpuEI CTTGAG 2 cut(s) 3711, 3833
Bsa29I ATCGAT 1 cut(s) 3147
BsaAI YACGTR 2 cut(s) 1496, 2066
BsaI GGTCTC 4 cut(s) 845, 914, 3320, 4200
BsaJI CCNNGG 7 cut(s) 547, 1444, 1554, 1814, 1920, 1962, 4089
BsaXI ACNNNNNCTCC 8 cut(s) 854, 884, 973, 1003, 1731, 1761, 3247, 3277
Bsc4I CCNNNNNNNGG 6 cut(s) 332, 647, 783, 1710, 3473, 3647
Bse1I ACTGG 7 cut(s) 20, 2928, 3467, 3595, 3896, 4122, 4196
Bse3DI GCAATG 4 cut(s) 69, 117, 417, 887
BseBI CCWGG 7 cut(s) 549, 914, 993, 1445, 1737, 3209, 3860
BseCI ATCGAT 1 cut(s) 3147
BseDI CCNNGG 7 cut(s) 547, 1444, 1554, 1814, 1920, 1962, 4089
BseGI GGATG 6 cut(s) 341, 1027, 1534, 3303, 3720, 4215
BseLI CCNNNNNNNGG 6 cut(s) 332, 647, 783, 1710, 3473, 3647
BseMI GCAATG 4 cut(s) 69, 117, 417, 887
BseMII CTCAG 8 cut(s) 33, 761, 1785, 1877, 2018, 2166, 2409, 3249
BseNI ACTGG 7 cut(s) 20, 2928, 3467, 3595, 3896, 4122, 4196
BsePI GCGCGC 1 cut(s) 3928
BseRI GAGGAG 3 cut(s) 810, 3513, 3958
BseSI GKGCMC 1 cut(s) 2071
BseYI CCCAGC 3 cut(s) 376, 646, 1165
BsgI GTGCAG 4 cut(s) 672, 3033, 4024, 4069
Bsh1236I CGCG 1 cut(s) 3930
Bsh1285I CGRYCG 2 cut(s) 294, 3452
BshVI ATCGAT 1 cut(s) 3147
BsiEI CGRYCG 2 cut(s) 294, 3452
BsiHKAI GWGCWC 4 cut(s) 1608, 2071, 2170, 2779
BsiSI CCGG 1 cut(s) 1526
BslFI GGGAC 5 cut(s) 1727, 1927, 2495, 2945, 3915
BslI CCNNNNNNNGG 6 cut(s) 332, 647, 783, 1710, 3473, 3647
BsmAI GTCTC 6 cut(s) 845, 914, 1289, 2689, 3320, 4200
BsmFI GGGAC 5 cut(s) 1727, 1927, 2495, 2945, 3915
BsmI GAATGC 3 cut(s) 62, 1648, 2326
Bso31I GGTCTC 4 cut(s) 845, 914, 3320, 4200
Bsp1286I GDGCHC 5 cut(s) 1608, 2071, 2170, 2779, 3088
Bsp1407I TGTACA 1 cut(s) 3874
Bsp19I CCATGG 1 cut(s) 1920
BspACI CCGC 6 cut(s) 5, 113, 756, 2037, 2050, 3426
BspCNI CTCAG 8 cut(s) 34, 762, 1784, 1876, 2017, 2167, 2410, 3248
BspDI ATCGAT 1 cut(s) 3147
BspFNI CGCG 1 cut(s) 3930
BspHI TCATGA 6 cut(s) 688, 2299, 2667, 2676, 3694, 3793
BspLI GGNNCC 5 cut(s) 1509, 1877, 2893, 3085, 3947
BspMAI CTGCAG 2 cut(s) 2443, 3244
BspMI ACCTGC 1 cut(s) 3796
BspOI GCTAGC 3 cut(s) 2291, 3162, 3368
BspTI CTTAAG 1 cut(s) 3700
BspTNI GGTCTC 4 cut(s) 845, 914, 3320, 4200
BsrDI GCAATG 4 cut(s) 69, 117, 417, 887
BsrGI TGTACA 1 cut(s) 3874
BsrI ACTGG 7 cut(s) 20, 2928, 3467, 3595, 3896, 4122, 4196
BssECI CCNNGG 7 cut(s) 547, 1444, 1554, 1814, 1920, 1962, 4089
BssHII GCGCGC 1 cut(s) 3928
BssNAI GTATAC 1 cut(s) 1840
BssT1I CCWWGG 4 cut(s) 1554, 1920, 1962, 4089
Bst1107I GTATAC 1 cut(s) 1840
Bst2UI CCWGG 7 cut(s) 549, 914, 993, 1445, 1737, 3209, 3860
Bst6I CTCTTC 3 cut(s) 2274, 2460, 3280
BstAFI CTTAAG 1 cut(s) 3700
BstAPI GCANNNNNTGC 4 cut(s) 1133, 2123, 3248, 3406
BstAUI TGTACA 1 cut(s) 3874
BstBAI YACGTR 2 cut(s) 1496, 2066
BstC8I GCNNGC 9 cut(s) 2289, 3058, 3062, 3066, 3160, 3362, 3366, 3930, 4098
BstDSI CCRYGG 2 cut(s) 1814, 1920
BstENI CCTNNNNNAGG 1 cut(s) 781
BstF5I GGATG 6 cut(s) 341, 1027, 1534, 3303, 3720, 4215
BstFNI CGCG 1 cut(s) 3930
BstH2I RGCGCY 1 cut(s) 2273
BstHHI GCGC 4 cut(s) 2117, 2272, 3930, 3932
BstMAI GTCTC 6 cut(s) 845, 914, 1289, 2689, 3320, 4200
BstMCI CGRYCG 2 cut(s) 294, 3452
BstNI CCWGG 7 cut(s) 549, 914, 993, 1445, 1737, 3209, 3860
BstNSI RCATGY 3 cut(s) 1437, 3364, 3409
BstSCI CCNGG 7 cut(s) 547, 912, 991, 1443, 1735, 3207, 3858
BstSFI CTRYAG 6 cut(s) 166, 2370, 2439, 3240, 3384, 3642
BstSLI GKGCMC 1 cut(s) 2071
BstSNI TACGTA 1 cut(s) 1496
BstUI CGCG 1 cut(s) 3930
BstV2I GAAGAC 3 cut(s) 1070, 2186, 3447
BstX2I RGATCY 2 cut(s) 1875, 3730
BstYI RGATCY 2 cut(s) 1875, 3730
BstZ17I GTATAC 1 cut(s) 1840
Bsu15I ATCGAT 1 cut(s) 3147
BsuI GTATCC 4 cut(s) 578, 1678, 2641, 4059
BsuTUI ATCGAT 1 cut(s) 3147
BtgI CCRYGG 2 cut(s) 1814, 1920
BtsCI GGATG 6 cut(s) 341, 1027, 1534, 3303, 3720, 4215
BtsI GCAGTG 4 cut(s) 1636, 2130, 2334, 3972
BveI ACCTGC 1 cut(s) 3796
Cac8I GCNNGC 9 cut(s) 2289, 3058, 3062, 3066, 3160, 3362, 3366, 3930, 4098
CciI TCATGA 6 cut(s) 688, 2299, 2667, 2676, 3694, 3793
CfoI GCGC 4 cut(s) 2117, 2272, 3930, 3932
Cfr13I GGNCC 6 cut(s) 18, 758, 774, 1068, 1972, 3856
ClaI ATCGAT 1 cut(s) 3147
Csp6I GTAC 5 cut(s) 1358, 2423, 2921, 3565, 3875
CspCI CAANNNNNGTGG 4 cut(s) 2014, 2049, 2787, 2822
CviQI GTAC 5 cut(s) 1358, 2423, 2921, 3565, 3875
DraI TTTAAA 3 cut(s) 1663, 2262, 3498
DrdI GACNNNNNNGTC 1 cut(s) 906
DriI GACNNNNNGTC 2 cut(s) 756, 837
DseDI GACNNNNNNGTC 1 cut(s) 906
EaeI YGGCCR 2 cut(s) 2038, 2939
Eam1104I CTCTTC 3 cut(s) 2274, 2460, 3280
Eam1105I GACNNNNNGTC 2 cut(s) 756, 837
EarI CTCTTC 3 cut(s) 2274, 2460, 3280
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 2168
Eco105I TACGTA 1 cut(s) 1496
Eco130I CCWWGG 4 cut(s) 1554, 1920, 1962, 4089
Eco24I GRGCYC 2 cut(s) 2170, 3088
Eco31I GGTCTC 4 cut(s) 845, 914, 3320, 4200
Eco32I GATATC 3 cut(s) 130, 930, 1937
Eco47I GGWCC 4 cut(s) 18, 758, 1068, 1972
Eco53kI GAGCTC 1 cut(s) 2168
Eco57I CTGAAG 3 cut(s) 874, 1064, 1259
Eco72I CACGTG 1 cut(s) 2066
EcoICRI GAGCTC 1 cut(s) 2168
EcoNI CCTNNNNNAGG 1 cut(s) 781
EcoO109I RGGNCCY 3 cut(s) 774, 1972, 3856
EcoRII CCWGG 7 cut(s) 547, 912, 991, 1443, 1735, 3207, 3858
EcoRV GATATC 3 cut(s) 130, 930, 1937
EcoT14I CCWWGG 4 cut(s) 1554, 1920, 1962, 4089
EcoT22I ATGCAT 1 cut(s) 3411
EcoT38I GRGCYC 2 cut(s) 2170, 3088
ErhI CCWWGG 4 cut(s) 1554, 1920, 1962, 4089
FalI AAGNNNNNCTT 6 cut(s) 483, 515, 1932, 1964, 1946, 1978
FaqI GGGAC 5 cut(s) 1727, 1927, 2495, 2945, 3915
FauNDI CATATG 2 cut(s) 1855, 3310
FbaI TGATCA 2 cut(s) 2664, 3790
FblI GTMKAC 2 cut(s) 1839, 2091
FokI GGATG 6 cut(s) 348, 1034, 1541, 3310, 3707, 4202
FriOI GRGCYC 2 cut(s) 2170, 3088
GlaI GCGC 4 cut(s) 2116, 2271, 3929, 3931
GsaI CCCAGC 3 cut(s) 380, 650, 1169
GsuI CTGGAG 4 cut(s) 896, 3102, 3913, 3992
HaeII RGCGCY 1 cut(s) 2273
HapII CCGG 1 cut(s) 1526
HhaI GCGC 4 cut(s) 2117, 2272, 3930, 3932
Hin6I GCGC 4 cut(s) 2115, 2270, 3928, 3930
HinP1I GCGC 4 cut(s) 2115, 2270, 3928, 3930
HincII GTYRAC 2 cut(s) 622, 2209
HindII GTYRAC 2 cut(s) 622, 2209
HpaII CCGG 1 cut(s) 1526
HphI GGTGA 6 cut(s) 614, 827, 1007, 1049, 1772, 1817
Hpy99I CGWCG 1 cut(s) 2251
HpyCH4IV ACGT 3 cut(s) 1495, 1580, 2065
HpySE526I ACGT 3 cut(s) 1495, 1580, 2065
HspAI GCGC 4 cut(s) 2115, 2270, 3928, 3930
Ksp22I TGATCA 2 cut(s) 2664, 3790
LmnI GCTCC 8 cut(s) 1507, 1538, 1603, 2165, 3083, 3526, 3894, 3945
MaeII ACGT 3 cut(s) 1495, 1580, 2065
MaeIII GTNAC 9 cut(s) 11, 1156, 1362, 1420, 1576, 2194, 2410, 2583, 3825
MfeI CAATTG 4 cut(s) 225, 2450, 3552, 3684
MflI RGATCY 2 cut(s) 1875, 3730
MhlI GDGCHC 5 cut(s) 1608, 2071, 2170, 2779, 3088
MmeI TCCRAC 5 cut(s) 772, 852, 1581, 3553, 3758
Mph1103I ATGCAT 1 cut(s) 3411
MroXI GAANNNNTTC 2 cut(s) 495, 1947
MslI CAYNNNNRTG 1 cut(s) 4091
MspA1I CMGCKG 5 cut(s) 671, 756, 1418, 2050, 3239
MspCI CTTAAG 1 cut(s) 3700
MspI CCGG 1 cut(s) 1526
MspR9I CCNGG 7 cut(s) 549, 914, 993, 1445, 1737, 3209, 3860
MunI CAATTG 4 cut(s) 225, 2450, 3552, 3684
Mva1269I GAATGC 3 cut(s) 62, 1648, 2326
MvaI CCWGG 7 cut(s) 549, 914, 993, 1445, 1737, 3209, 3860
MvnI CGCG 1 cut(s) 3930
NcoI CCATGG 1 cut(s) 1920
NdeI CATATG 2 cut(s) 1855, 3310
NheI GCTAGC 3 cut(s) 2287, 3158, 3364
NlaIV GGNNCC 5 cut(s) 1509, 1877, 2893, 3085, 3947
NmuCI GTSAC 5 cut(s) 1156, 1362, 1420, 1576, 2194
NsiI ATGCAT 1 cut(s) 3411
NspI RCATGY 3 cut(s) 1437, 3364, 3409
OliI CACNNNNGTG 1 cut(s) 4091
PaeI GCATGC 1 cut(s) 3364
PagI TCATGA 6 cut(s) 688, 2299, 2667, 2676, 3694, 3793
PaqCI CACCTGC 1 cut(s) 3796
PauI GCGCGC 1 cut(s) 3928
PctI GAATGC 3 cut(s) 62, 1648, 2326
PdmI GAANNNNTTC 2 cut(s) 495, 1947
PfeI GAWTC 7 cut(s) 92, 656, 1032, 2053, 3071, 3120, 3863
PflFI GACNNNGTC 1 cut(s) 3304
PmaCI CACGTG 1 cut(s) 2066
PmlI CACGTG 1 cut(s) 2066
Ppu21I YACGTR 2 cut(s) 1496, 2066
PpuMI RGGWCCY 1 cut(s) 1972
PsiI TTATAA 1 cut(s) 1380
Psp124BI GAGCTC 1 cut(s) 2170
Psp5II RGGWCCY 1 cut(s) 1972
Psp6I CCWGG 7 cut(s) 547, 912, 991, 1443, 1735, 3207, 3858
PspCI CACGTG 1 cut(s) 2066
PspFI CCCAGC 3 cut(s) 376, 646, 1165
PspGI CCWGG 7 cut(s) 547, 912, 991, 1443, 1735, 3207, 3858
PspN4I GGNNCC 5 cut(s) 1509, 1877, 2893, 3085, 3947
PspPI GGNCC 6 cut(s) 18, 758, 774, 1068, 1972, 3856
PspPPI RGGWCCY 1 cut(s) 1972
PstI CTGCAG 2 cut(s) 2443, 3244
PsuI RGATCY 2 cut(s) 1875, 3730
PsyI GACNNNGTC 1 cut(s) 3304
PteI GCGCGC 1 cut(s) 3928
PvuII CAGCTG 3 cut(s) 671, 1418, 3239
RsaI GTAC 5 cut(s) 1359, 2424, 2922, 3566, 3876
RsaNI GTAC 5 cut(s) 1358, 2423, 2921, 3565, 3875
RseI CAYNNNNRTG 1 cut(s) 4091
SacI GAGCTC 1 cut(s) 2170
Sau96I GGNCC 6 cut(s) 18, 758, 774, 1068, 1972, 3856
ScaI AGTACT 2 cut(s) 1359, 2922
ScrFI CCNGG 7 cut(s) 549, 914, 993, 1445, 1737, 3209, 3860
SduI GDGCHC 5 cut(s) 1608, 2071, 2170, 2779, 3088
SfcI CTRYAG 6 cut(s) 166, 2370, 2439, 3240, 3384, 3642
SinI GGWCC 4 cut(s) 18, 758, 1068, 1972
SmiMI CAYNNNNRTG 1 cut(s) 4091
SmlI CTYRAG 3 cut(s) 3700, 3726, 3812
SmoI CTYRAG 3 cut(s) 3700, 3726, 3812
SnaBI TACGTA 1 cut(s) 1496
SpeI ACTAGT 1 cut(s) 3955
SphI GCATGC 1 cut(s) 3364
SsiI CCGC 6 cut(s) 5, 113, 756, 2037, 2050, 3426
SspI AATATT 1 cut(s) 109
SstI GAGCTC 1 cut(s) 2170
StyD4I CCNGG 7 cut(s) 547, 912, 991, 1443, 1735, 3207, 3858
StyI CCWWGG 4 cut(s) 1554, 1920, 1962, 4089
TaiI ACGT 3 cut(s) 1498, 1583, 2068
TaqI TCGA 9 cut(s) 294, 1548, 2564, 2698, 2750, 3147, 3201, 3448, 3628
TaqII GACCGA 1 cut(s) 3466
TatI WGTACW 3 cut(s) 1357, 2920, 3874
TauI GCSGC 2 cut(s) 2040, 3428
TfiI GAWTC 7 cut(s) 92, 656, 1032, 2053, 3071, 3120, 3863
TseFI GTSAC 5 cut(s) 1156, 1362, 1420, 1576, 2194
Tsp45I GTSAC 5 cut(s) 1156, 1362, 1420, 1576, 2194
TspGWI ACGGA 1 cut(s) 1831
Tth111I GACNNNGTC 1 cut(s) 3304
Vha464I CTTAAG 1 cut(s) 3700
VneI GTGCAC 1 cut(s) 2067
VpaK11BI GGWCC 4 cut(s) 18, 758, 1068, 1972
XagI CCTNNNNNAGG 1 cut(s) 781
XapI RAATTY 8 cut(s) 1040, 1300, 1674, 2256, 2362, 3350, 3370, 4028
XbaI TCTAGA 1 cut(s) 3766
XceI RCATGY 3 cut(s) 1437, 3364, 3409
XcmI CCANNNNNNNNNTGG 1 cut(s) 3979
XmiI GTMKAC 2 cut(s) 1839, 2091
XmnI GAANNNNTTC 2 cut(s) 495, 1947
ZrmI AGTACT 2 cut(s) 1359, 2922
Zsp2I ATGCAT 1 cut(s) 3411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.