MD14G1118100.v1.1

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0002044
Physical Location & Seq
Reverse (-)
19283088 .. 19288617
5530 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1118100.v1.1.491

Sequence Viewer

Length: 4305 bp
ATGTTCACATGCAAATTATCATCAAGGAAGGTTATGGCACCGTCACAGTCTCATACCATCTCTTCAGCGTCAATAATCTCGGCCACCTTCAATGCTGGTTTGGCTTTAGCTTACTTTGGTTTTGGGATATGGACAATCGTCAAGAAAGTAAATGCAGACCAGACCGTTTTTCCCCTCCATGGATGGCTAGCTTTGCTCTTCCAAGGGTTCACATGGTTGCTTCTAGCTTTTTTCATAAGCCTCAACAAGCCACAACCACAAGAAACTGTGATAACAAAATCTTGTTCAATACTTGGCTTCTTGATTGCAGTTTTTCTTTCAAGTTCATCAATTTGGAAAGCTATTGTGGAGGAGGCAGTATCGGTTAAGATTGTTTTAAACATTTTCTACTTCCCTGGATCAATTCTTTTGCTATTTAGTGCATTTCAGGGAAGCAATTTTGCAAAAGGCGATTCAGAGATCGACGGTGACGCCTTCTACAAACCATTACAAGGTGCAGAGTCTGATAAAATAGGTGAAATCAGTTCAGATGACAATGTAACACCTTTTGCAAAAGCAGGGTTATGCAGCTCAATGTCATTTTGGTGGTTGAATTCGTTAATGAAGAAAGGTAAGCAAAAGGTTCTCGAGAATGAAGATATTCCACAGCTGCGGCAGGATGATCAAGCAAGAACGTGGTACTTCATATTTATGGAGCAATTGAACAAAAGGAAGGAAGCAGATCCGTCTGTTCAACCTTCTATCTTGTCCATTATTTTTCATTGCCAGAGGAAAGCTATTTTGATTTCGGGATTATTTGCTCTGATCAAGACTCTCACCACGTCAACCAGTCCACTGTTTCTCATGGCCTTCATTAAGATTATTGAAGGCAATGCAGCTTTGAAATATGAAGGTTATGCACTGACTTTTGGCCTCTTTGTTGTGAAAATCATTGAGTCACTGTCGGAGAGGCAATGGTATTTTAAAACTAGACTGATGGGGCTTCAAGTGAGATCATTGGTGTCAGCAGCCATATATCAGAAGCAACTACGACTCTCGAATGCTGCCAAGATGACACATTCTCCTGGTGAGATAGTGAATTATGTGACGGTGGATGCTTACAGAATCGGCGAGTTTCCATACTGGTTTCATCAGATATGGACCACAAGCCTTCAGCTGTGCCTTTCATTACTTATCGTTTACTTCTCTGTGGGTCTGGCAATTGCTGCAGCTCTAGCTGTACTCTTATTGAGTGCACTAGCAAGCTCACCATTAGTGAAGTTGCAGCATGAGTATCAAACGAAGCTCATGGTAGCACAAAACAGAAGGTTGAAGGCCATAACAGAAGCACTTTCAAATATGAAAATCTTGAAATTGTATTCCTGGGAGACAAATTTTAGGAATGTGATAGAAGGTTTACGAACGGAAGAATTAAAATTGGTATATCAAGTGTTGTCACAAAAGGGATATAATATGGCTCTATTCTGGGCATCTCCTCTTTTCGTATCGGCAGTCACTTTTTGGACATGCTACTTCCTTGGGTTTACACTCTCTCCTAGTAATGTTTTCACATTTTTAGCAACTTTACGCCTTGTTCAGGAGCCTATTAGGTTGACTGCGGATGTTTTTGGAGCATTTATTGAAGCAAAGGTTTCATTTTCTCGGATTGAGAAGTTTCTCGATGCACCAGAGTTGGAGAACAGACATACAAGGAAAGAGAGCTGTGCCGCAGATGTTGAGCATTCCATTGTATTTAGAAGTCCTGAAATTTCATGGGGCGCTAATCCTTTAAAGGCTACATTAAGGAACATAAATTTGGTGGTGAAACCGGGTGAGAAGGTAGCAATTTGTGGAGAGGTTGGCTCCGGTAAATCAACCCTTTTGGCTGCAATTCTTGGAGAAGTTCCACGCATCAATGGCATTGTTCAAGTATATGGGAAGATAGCGTATGTTTCTCAGTCTGCATGGATTCAAACCGGAACTATTCAAGAAAACATTCTGTTTGGGTCTGTTATGGATCATGTTAGGTACCAAGAAACACTTGAGAAGTGTTCTCTAGTGAAGGACCTTGAGATGCTTCCGTTCCGCGATCTAACTCAGATAGGAGAAAAAGGTGTCAATCTAAGTGGTGGGCAGAAGCAGCGCATCCAACTTGCGCGTGCACTCTATCAAAATGCTGATGTCTATCTCTTGGATGATCCTTTCAGCGCAGTTGATGCCCATACGGCGACACACCTTTTCAATGAATATATCATGGGAGCTCTGTCAGGGAAGACGGTTTTACTTGTGACACACCAAGTGGATTTCCTTCCAGCTTTTAATTCTATCTTGTTGATATCTTCGGGGAAAATCTTTAGATCAGCTTCTTACGGAGAGTTACTCGCTTCTTGTGACGAATTCCAAGGCCTTGTCCATGCACACCACAGCACTGCTGGTTGCGAGAGGCAAGTGGAGTACGCTTCTACTAGACAACATAAATCATCTGGGGAGGAGATTGTGAAAGTTAAAACTGTAGTACAGCAAACGGAATCTTCAGGAGATCAATTAATTAAGAAAGAAGAGAGGGAGACCGGGGACACTGGTTTCAAACCATACATTCAGTACTTGAAACAACGCAAGGGATTTTTGTACTTCTCCTTGTCAATCTTTTTTCATTTGATATTCATAGTCGGCCAATTAATTCAATCCTATTGGTTGGCTTCCAAGCTTCAGGATTATAGCGTATCAAGAGTCAAACTATTCATTGTGTATACAATGATAATGTGCATCATGTCATTTGGTGTGCTTCTTAGAGTCTTCTGCTTAGTTGAATTAGGATGTGGAACATCAAAATCCATTTTCGACACACTACTCAACTCTCTTTTCCGAGCACCAATGCTGTTCTATGACTCGACACCAGTGGGAAGGATACTTAGTCGGGTCTCTAATGATATGAACATTGTCGACCTTGAAGTAGCTTTCAAGTTGGGGATTTCTGTTGGTTCAACTTTGATGACATACAGCGTTTATATAGTTTTGGTTTTGATTACTTGGCCAATCGTGCTTCTGATTATACCCACGATTTATGTTACTGTACTACTTCAGAATTACTACTTTGCTTCTGCAAAAGAGTTAATGCGGATGAATGGCACGACTAAGTCTGCGCTTGCAAGCCACCTTGCCGAATCTATTGCTGGATCCTTGACAATCAGAGCTTTTGGAGAGGAGGATCGGTTCTTCTCGAAAAACTTGGAATTTATTGATGCAAATGCAAGTGCTGACTTCAATAGGTTTTCAGTGAATGAGTGGTTGATCGAACGTCTTGAATTGCTATGTGCGATTATTCTCTCAGCCTCAGCACTTGCAATCACTTTGATTCAGTTTGACGCATCTTCCTCTGGTTTTATTGGGATGGCACTATCTTTTGGTCTGTCCTTAAATTTATACCTCGTAGTTTCAGTCCAATTCCAATGCATGCTAGAGAATTCAATGATATCAGTAGAAAGAGTAGAGCAATACATGCATATTCCCAGTGAGGCTCCAGAAATAATAGAAGAAAACCGACCTGTGCACAGTTGGCCAACTGTTGGTAAAGTGGAAATACATGATTTAAAGGTACGATATAGGCCAAATGCTCCGCTAGTTCTTCGTGGGATAAACTGCATAATTGAAGGAGGGTACAAAATTGGGATTGTTGGCCGGACTGGAAGTGGGAAGACTACTCTTATCAGCGTTTTGTTTCGTTTGGTGGAGCCTACGGAGGGAAGGGTCATTGTCGATGACTATGACATTTGCAAAATCGGGCTTCATGATTTAAGATCGCGTTTTGGGATCATACCACAAGATCCAACACTGTTCAATGGATCTGTGAGATTCAATCTAGACCCCTTATCAGAACATACTGATCATGAAATATGGGAGGTTTTAGAGAAATGTCAGTTACGCGAGGTCATTGAGGAAAAAGAAGAGGGCCTGGATTCTTTAGTTGTACAAGATGGAACAAACTGGAGCATGGGACAGCGACAACTATTTTGTTTGGGACGCGCTTTGTTGAAGAGGAGCCGGATACTAGTCCTTGATGAAGCTACTGCGTCAATGGACAATGCAACAGACTCTATTCTGCAGAAAACTATAAGAACAGAATTTGCTAACTGCACTGTAATAACCGTGGCTCATAGGATACCAACCGTGATGGACTGCACTAAAGTACTTGCTATTAGTGATGGGAGAATAGTAGAGTATGATGAGCCAATGAAGCTGATGAAGAATGAGGGCTCATTGTTTGGGCAGCTAGTCAAAGAATACTGGTCTCGCGCTGCCATTGCCGGCATCCACTCAGACGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1435

Amino Acids

160.6

Weight (kDa)

6.96

Isoelectric Point (pI)

34.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 2 - 146 3.4e-49 ABCC10 N-terminal domain
ABC_membrane PF00664 260 - 528 2.6e-26 ABC transporter transmembrane region
ABC_tran PF00005 594 - 728 9.5e-23 ABC transporter
ABC_membrane PF00664 873 - 1127 1.5e-28 ABC transporter transmembrane region
ABC_tran PF00005 1202 - 1350 2.5e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2007
AccB1I GGYRCC 2 cut(s) 37, 2007
AccB7I CCANNNNNTGG 1 cut(s) 3545
AccI GTMKAC 2 cut(s) 2729, 2922
AccII CGCG 6 cut(s) 2067, 2137, 3781, 3903, 4002, 4272
AciI CCGC 6 cut(s) 652, 1598, 1707, 2065, 3097, 3596
AcoI YGGCCR 5 cut(s) 81, 2650, 3011, 3536, 3655
AcsI RAATTY 9 cut(s) 592, 1372, 1746, 1792, 2375, 3212, 3397, 3442, 4100
AcuI CTGAAG 5 cut(s) 48, 1136, 2496, 2672, 3044
AcyI GRCGYC 1 cut(s) 471
AdeI CACNNNGTG 1 cut(s) 2278
AfiI CCNNNNNNNGG 5 cut(s) 179, 491, 1576, 3545, 3719
AhlI ACTAGT 1 cut(s) 4027
AjiI CACGTC 1 cut(s) 822
AjnI CCWGG 4 cut(s) 394, 1063, 1361, 3930
AjuI GAANNNNNNNTTGG 2 cut(s) 1778, 1810
AloI GAACNNNNNNTCC 2 cut(s) 3176, 3208
Alw21I GWGCWC 5 cut(s) 1237, 2143, 2242, 2851, 3531
Alw26I GTCTC 5 cut(s) 54, 1361, 2540, 2905, 4272
Alw44I GTGCAC 3 cut(s) 1233, 2139, 3527
AlwNI CAGNNNCTG 1 cut(s) 503
Ama87I CYCGRG 1 cut(s) 626
ApaLI GTGCAC 3 cut(s) 1233, 2139, 3527
ApoI RAATTY 9 cut(s) 592, 1372, 1746, 1792, 2375, 3212, 3397, 3442, 4100
ArsI GACNNNNNNTTYG 2 cut(s) 3972, 4004
AseI ATTAAT 2 cut(s) 2525, 2657
Asp700I GAANNNNTTC 2 cut(s) 639, 1974
Asp718I GGTACC 1 cut(s) 2007
AspLEI GCGC 7 cut(s) 1760, 2124, 2137, 2189, 3124, 4004, 4274
AspS9I GGNCC 3 cut(s) 1140, 2044, 3928
AsuC2I CCSGG 2 cut(s) 1809, 2551
AsuHPI GGTGA 7 cut(s) 479, 527, 808, 1079, 1239, 1813, 1823
AsuNHI GCTAGC 1 cut(s) 187
AvaI CYCGRG 1 cut(s) 626
AvaII GGWCC 2 cut(s) 1140, 2044
BaeGI GKGCMC 3 cut(s) 1237, 2143, 3531
BalI TGGCCA 2 cut(s) 3013, 3538
BamHI GGATCC 1 cut(s) 3155
BanI GGYRCC 2 cut(s) 37, 2007
BanII GRGCYC 2 cut(s) 2242, 4235
BbsI GAAGAC 3 cut(s) 2258, 2767, 3680
Bbv12I GWGCWC 5 cut(s) 1237, 2143, 2242, 2851, 3531
BbvCI CCTCAGC 1 cut(s) 3313
BccI CCATC 7 cut(s) 65, 177, 970, 3364, 3947, 4144, 4175
BceAI ACGGC 1 cut(s) 2220
BcgI CGANNNNNNTGC 2 cut(s) 3131, 3165
BciT130I CCWGG 4 cut(s) 396, 1065, 1363, 3932
BciVI GTATCC 3 cut(s) 2880, 4017, 4131
BclI TGATCA 3 cut(s) 661, 804, 3862
BcnI CCSGG 2 cut(s) 1809, 2551
BcoDI GTCTC 5 cut(s) 54, 1361, 2540, 2905, 4272
BcuI ACTAGT 1 cut(s) 4027
BfmI CTRYAG 3 cut(s) 1206, 2490, 4079
BfoI RGCGCY 1 cut(s) 1761
BfuI GTATCC 3 cut(s) 2880, 4017, 4131
BglI GCCNNNNNGGC 1 cut(s) 2204
BmcAI AGTACT 2 cut(s) 2582, 4167
Bme1390I CCNGG 6 cut(s) 396, 1065, 1363, 1809, 2551, 3932
Bme18I GGWCC 2 cut(s) 1140, 2044
BmeT110I CYCGRG 1 cut(s) 626
BmgBI CACGTC 1 cut(s) 822
BmgT120I GGNCC 3 cut(s) 1140, 2044, 3928
BmiI GGNNCC 8 cut(s) 39, 1581, 1843, 2009, 3157, 3498, 3711, 4019
BmrFI CCNGG 6 cut(s) 396, 1065, 1363, 1809, 2551, 3932
BmrI ACTGGG 1 cut(s) 3483
BmtI GCTAGC 1 cut(s) 191
BmuI ACTGGG 1 cut(s) 3483
BoxI GACNNNNGTC 1 cut(s) 137
BpiI GAAGAC 3 cut(s) 2258, 2767, 3680
BplI GAGNNNNNCTC 4 cut(s) 1826, 1858, 2343, 2375
BpmI CTGGAG 2 cut(s) 3483, 3985
Bpu10I CCTNAGC 1 cut(s) 3313
BpuEI CTTGAG 2 cut(s) 2042, 2069
BpuMI CCSGG 2 cut(s) 1809, 2551
BsaBI GATNNNNATC 1 cut(s) 2163
BsaHI GRCGYC 1 cut(s) 471
BsaI GGTCTC 3 cut(s) 2540, 2905, 4272
BsaJI CCNNGG 8 cut(s) 178, 202, 394, 1362, 1516, 2380, 2550, 4125
BsaWI WCCGGW 2 cut(s) 1844, 1955
BsaXI ACNNNNNCTCC 6 cut(s) 1045, 1075, 1516, 1546, 3176, 3206
Bsc4I CCNNNNNNNGG 5 cut(s) 179, 491, 1576, 3545, 3719
Bse118I RCCGGY 1 cut(s) 4283
Bse1I ACTGG 8 cut(s) 828, 1127, 2563, 2876, 3489, 3667, 3968, 4268
Bse3DI GCAATG 4 cut(s) 760, 877, 959, 4278
Bse8I GATNNNNATC 1 cut(s) 2163
BseBI CCWGG 4 cut(s) 396, 1065, 1363, 3932
BseDI CCNNGG 8 cut(s) 178, 202, 394, 1362, 1516, 2380, 2550, 4125
BseJI GATNNNNATC 1 cut(s) 2163
BseLI CCNNNNNNNGG 5 cut(s) 179, 491, 1576, 3545, 3719
BseMI GCAATG 4 cut(s) 760, 877, 959, 4278
BseMII CTCAG 4 cut(s) 1949, 2090, 3321, 3327
BseNI ACTGG 8 cut(s) 828, 1127, 2563, 2876, 3489, 3667, 3968, 4268
BseRI GAGGAG 5 cut(s) 365, 1464, 2483, 3197, 4030
BseSI GKGCMC 3 cut(s) 1237, 2143, 3531
BsgI GTGCAG 3 cut(s) 516, 4096, 4141
Bsh1236I CGCG 6 cut(s) 2067, 2137, 3781, 3903, 4002, 4272
BshNI GGYRCC 2 cut(s) 37, 2007
BsiHKAI GWGCWC 5 cut(s) 1237, 2143, 2242, 2851, 3531
BsiHKCI CYCGRG 1 cut(s) 626
BsiSI CCGG 7 cut(s) 1808, 1845, 1956, 2550, 3658, 4021, 4284
BslFI GGGAC 3 cut(s) 2567, 3987, 4011
BslI CCNNNNNNNGG 5 cut(s) 179, 491, 1576, 3545, 3719
BsmAI GTCTC 5 cut(s) 54, 1361, 2540, 2905, 4272
BsmFI GGGAC 3 cut(s) 2567, 3987, 4011
BsmI GAATGC 2 cut(s) 1045, 1720
Bso31I GGTCTC 3 cut(s) 2540, 2905, 4272
BsoBI CYCGRG 1 cut(s) 626
Bsp1286I GDGCHC 6 cut(s) 1237, 2143, 2242, 2851, 3531, 4235
Bsp1407I TGTACA 1 cut(s) 3946
Bsp19I CCATGG 1 cut(s) 178
BspACI CCGC 6 cut(s) 652, 1598, 1707, 2065, 3097, 3596
BspCNI CTCAG 4 cut(s) 1948, 2089, 3320, 3326
BspFNI CGCG 6 cut(s) 2067, 2137, 3781, 3903, 4002, 4272
BspHI TCATGA 2 cut(s) 3766, 3865
BspLI GGNNCC 8 cut(s) 39, 1581, 1843, 2009, 3157, 3498, 3711, 4019
BspMAI CTGCAG 2 cut(s) 1210, 4083
BspOI GCTAGC 1 cut(s) 191
BspQI GCTCTTC 1 cut(s) 203
BspT107I GGYRCC 2 cut(s) 37, 2007
BspTNI GGTCTC 3 cut(s) 2540, 2905, 4272
BsrDI GCAATG 4 cut(s) 760, 877, 959, 4278
BsrFI RCCGGY 1 cut(s) 4283
BsrGI TGTACA 1 cut(s) 3946
BsrI ACTGG 8 cut(s) 828, 1127, 2563, 2876, 3489, 3667, 3968, 4268
BssAI RCCGGY 1 cut(s) 4283
BssECI CCNNGG 8 cut(s) 178, 202, 394, 1362, 1516, 2380, 2550, 4125
BssNAI GTATAC 1 cut(s) 2730
BssNI GRCGYC 1 cut(s) 471
BssT1I CCWWGG 4 cut(s) 178, 202, 1516, 2380
Bst1107I GTATAC 1 cut(s) 2730
Bst2UI CCWGG 4 cut(s) 396, 1065, 1363, 3932
Bst6I CTCTTC 5 cut(s) 67, 203, 2532, 3918, 4007
BstACI GRCGYC 1 cut(s) 471
BstAPI GCANNNNNTGC 3 cut(s) 1205, 2195, 3478
BstAUI TGTACA 1 cut(s) 3946
BstC8I GCNNGC 7 cut(s) 189, 1243, 2139, 3126, 3130, 3434, 4285
BstDSI CCRYGG 2 cut(s) 178, 4125
BstENI CCTNNNNNAGG 1 cut(s) 1574
BstFNI CGCG 6 cut(s) 2067, 2137, 3781, 3903, 4002, 4272
BstH2I RGCGCY 1 cut(s) 1761
BstHHI GCGC 7 cut(s) 1760, 2124, 2137, 2189, 3124, 4004, 4274
BstMAI GTCTC 5 cut(s) 54, 1361, 2540, 2905, 4272
BstNI CCWGG 4 cut(s) 396, 1065, 1363, 3932
BstNSI RCATGY 4 cut(s) 12, 1509, 3436, 3481
BstPAI GACNNNNGTC 1 cut(s) 137
BstSCI CCNGG 6 cut(s) 394, 1063, 1361, 1807, 2549, 3930
BstSFI CTRYAG 3 cut(s) 1206, 2490, 4079
BstSLI GKGCMC 3 cut(s) 1237, 2143, 3531
BstUI CGCG 6 cut(s) 2067, 2137, 3781, 3903, 4002, 4272
BstV2I GAAGAC 3 cut(s) 2258, 2767, 3680
BstX2I RGATCY 4 cut(s) 721, 3155, 3802, 3821
BstYI RGATCY 4 cut(s) 721, 3155, 3802, 3821
BstZ17I GTATAC 1 cut(s) 2730
BsuI GTATCC 3 cut(s) 2880, 4017, 4131
BtgI CCRYGG 2 cut(s) 178, 4125
BtrI CACGTC 1 cut(s) 822
BtsI GCAGTG 1 cut(s) 2406
Cac8I GCNNGC 7 cut(s) 189, 1243, 2139, 3126, 3130, 3434, 4285
CaiI CAGNNNCTG 1 cut(s) 503
CciI TCATGA 2 cut(s) 3766, 3865
CfoI GCGC 7 cut(s) 1760, 2124, 2137, 2189, 3124, 4004, 4274
Cfr10I RCCGGY 1 cut(s) 4283
Cfr13I GGNCC 3 cut(s) 1140, 2044, 3928
CseI GACGC 5 cut(s) 57, 479, 3353, 4008, 4038
CspCI CAANNNNNGTGG 2 cut(s) 2086, 2121
DraI TTTAAA 4 cut(s) 378, 964, 1770, 3570
DraIII CACNNNGTG 1 cut(s) 2278
EaeI YGGCCR 5 cut(s) 81, 2650, 3011, 3536, 3655
Eam1104I CTCTTC 5 cut(s) 67, 203, 2532, 3918, 4007
EarI CTCTTC 5 cut(s) 67, 203, 2532, 3918, 4007
Ecl136II GAGCTC 1 cut(s) 2240
Eco130I CCWWGG 4 cut(s) 178, 202, 1516, 2380
Eco147I AGGCCT 1 cut(s) 2385
Eco24I GRGCYC 2 cut(s) 2242, 4235
Eco31I GGTCTC 3 cut(s) 2540, 2905, 4272
Eco32I GATATC 2 cut(s) 2316, 3453
Eco47I GGWCC 2 cut(s) 1140, 2044
Eco53kI GAGCTC 1 cut(s) 2240
Eco57I CTGAAG 5 cut(s) 48, 1136, 2496, 2672, 3044
Eco88I CYCGRG 1 cut(s) 626
EcoICRI GAGCTC 1 cut(s) 2240
EcoNI CCTNNNNNAGG 1 cut(s) 1574
EcoO109I RGGNCCY 2 cut(s) 2044, 3928
EcoRI GAATTC 3 cut(s) 592, 2375, 3442
EcoRII CCWGG 4 cut(s) 394, 1063, 1361, 3930
EcoRV GATATC 2 cut(s) 2316, 3453
EcoT14I CCWWGG 4 cut(s) 178, 202, 1516, 2380
EcoT22I ATGCAT 2 cut(s) 3434, 3483
EcoT38I GRGCYC 2 cut(s) 2242, 4235
ErhI CCWWGG 4 cut(s) 178, 202, 1516, 2380
FalI AAGNNNNNCTT 2 cut(s) 2004, 2036
FaqI GGGAC 3 cut(s) 2567, 3987, 4011
FbaI TGATCA 3 cut(s) 661, 804, 3862
FblI GTMKAC 2 cut(s) 2729, 2922
FriOI GRGCYC 2 cut(s) 2242, 4235
GlaI GCGC 7 cut(s) 1759, 2123, 2136, 2188, 3123, 4003, 4273
GsuI CTGGAG 2 cut(s) 3483, 3985
HaeII RGCGCY 1 cut(s) 1761
HapII CCGG 7 cut(s) 1808, 1845, 1956, 2550, 3658, 4021, 4284
HgaI GACGC 5 cut(s) 57, 479, 3353, 4008, 4038
HhaI GCGC 7 cut(s) 1760, 2124, 2137, 2189, 3124, 4004, 4274
Hin1I GRCGYC 1 cut(s) 471
Hin6I GCGC 7 cut(s) 1758, 2122, 2135, 2187, 3122, 4002, 4272
HinP1I GCGC 7 cut(s) 1758, 2122, 2135, 2187, 3122, 4002, 4272
HincII GTYRAC 3 cut(s) 825, 1593, 2923
HindII GTYRAC 3 cut(s) 825, 1593, 2923
HindIII AAGCTT 1 cut(s) 2684
HpaII CCGG 7 cut(s) 1808, 1845, 1956, 2550, 3658, 4021, 4284
HphI GGTGA 7 cut(s) 479, 527, 808, 1079, 1239, 1813, 1823
Hpy99I CGWCG 1 cut(s) 467
HpyCH4IV ACGT 3 cut(s) 674, 821, 3277
HpySE526I ACGT 3 cut(s) 674, 821, 3277
Hsp92I GRCGYC 1 cut(s) 471
HspAI GCGC 7 cut(s) 1758, 2122, 2135, 2187, 3122, 4002, 4272
KpnI GGTACC 1 cut(s) 2011
KroI GCCGGC 1 cut(s) 4283
KroNI GCCGGC 1 cut(s) 4285
Ksp22I TGATCA 3 cut(s) 661, 804, 3862
LguI GCTCTTC 1 cut(s) 203
MaeII ACGT 3 cut(s) 674, 821, 3277
MfeI CAATTG 2 cut(s) 698, 1200
MflI RGATCY 4 cut(s) 721, 3155, 3802, 3821
MhlI GDGCHC 6 cut(s) 1237, 2143, 2242, 2851, 3531, 4235
MlsI TGGCCA 2 cut(s) 3013, 3538
MluNI TGGCCA 2 cut(s) 3013, 3538
MlyI GAGTC 8 cut(s) 509, 805, 944, 1026, 2718, 2781, 2861, 4064
MmeI TCCRAC 4 cut(s) 924, 1653, 2152, 3830
Mox20I TGGCCA 2 cut(s) 3013, 3538
Mph1103I ATGCAT 2 cut(s) 3434, 3483
MroNI GCCGGC 1 cut(s) 4283
MroXI GAANNNNTTC 2 cut(s) 639, 1974
MscI TGGCCA 2 cut(s) 3013, 3538
MslI CAYNNNNRTG 2 cut(s) 583, 689
Msp20I TGGCCA 2 cut(s) 3013, 3538
MspA1I CMGCKG 2 cut(s) 649, 1156
MspI CCGG 7 cut(s) 1808, 1845, 1956, 2550, 3658, 4021, 4284
MspR9I CCNGG 6 cut(s) 396, 1065, 1363, 1809, 2551, 3932
MunI CAATTG 2 cut(s) 698, 1200
Mva1269I GAATGC 2 cut(s) 1045, 1720
MvaI CCWGG 4 cut(s) 396, 1065, 1363, 3932
MvnI CGCG 6 cut(s) 2067, 2137, 3781, 3903, 4002, 4272
NaeI GCCGGC 1 cut(s) 4285
NciI CCSGG 2 cut(s) 1809, 2551
NcoI CCATGG 1 cut(s) 178
NgoMIV GCCGGC 1 cut(s) 4283
NheI GCTAGC 1 cut(s) 187
NlaIV GGNNCC 8 cut(s) 39, 1581, 1843, 2009, 3157, 3498, 3711, 4019
NmeAIII GCCGAG 1 cut(s) 59
NmuCI GTSAC 8 cut(s) 42, 467, 936, 1084, 1434, 1492, 2266, 2369
NsiI ATGCAT 2 cut(s) 3434, 3483
NspI RCATGY 4 cut(s) 12, 1509, 3436, 3481
PacI TTAATTAA 1 cut(s) 2529
PaeI GCATGC 1 cut(s) 3436
PaeR7I CTCGAG 1 cut(s) 626
PagI TCATGA 2 cut(s) 3766, 3865
PceI AGGCCT 1 cut(s) 2385
PciSI GCTCTTC 1 cut(s) 203
PctI GAATGC 2 cut(s) 1045, 1720
PdiI GCCGGC 1 cut(s) 4285
PdmI GAANNNNTTC 2 cut(s) 639, 1974
PfeI GAWTC 8 cut(s) 452, 1104, 1948, 2507, 3143, 3334, 3831, 3935
PflFI GACNNNGTC 1 cut(s) 3115
PflMI CCANNNNNTGG 1 cut(s) 3545
PleI GAGTC 8 cut(s) 508, 805, 943, 1026, 2717, 2780, 2861, 4064
PpsI GAGTC 8 cut(s) 508, 805, 943, 1026, 2717, 2780, 2861, 4064
PpuMI RGGWCCY 1 cut(s) 2044
PshAI GACNNNNGTC 1 cut(s) 137
PshBI ATTAAT 2 cut(s) 2525, 2657
Psp124BI GAGCTC 1 cut(s) 2242
Psp5II RGGWCCY 1 cut(s) 2044
Psp6I CCWGG 4 cut(s) 394, 1063, 1361, 3930
PspGI CCWGG 4 cut(s) 394, 1063, 1361, 3930
PspN4I GGNNCC 8 cut(s) 39, 1581, 1843, 2009, 3157, 3498, 3711, 4019
PspPI GGNCC 3 cut(s) 1140, 2044, 3928
PspPPI RGGWCCY 1 cut(s) 2044
PstI CTGCAG 2 cut(s) 1210, 4083
PstNI CAGNNNCTG 1 cut(s) 503
PsuI RGATCY 4 cut(s) 721, 3155, 3802, 3821
PsyI GACNNNGTC 1 cut(s) 3115
PvuII CAGCTG 2 cut(s) 649, 1156
RseI CAYNNNNRTG 2 cut(s) 583, 689
SacI GAGCTC 1 cut(s) 2242
SalI GTCGAC 1 cut(s) 2921
SapI GCTCTTC 1 cut(s) 203
Sau96I GGNCC 3 cut(s) 1140, 2044, 3928
ScaI AGTACT 2 cut(s) 2582, 4167
SchI GAGTC 8 cut(s) 509, 805, 944, 1026, 2718, 2781, 2861, 4064
ScrFI CCNGG 6 cut(s) 396, 1065, 1363, 1809, 2551, 3932
SduI GDGCHC 6 cut(s) 1237, 2143, 2242, 2851, 3531, 4235
SfcI CTRYAG 3 cut(s) 1206, 2490, 4079
Sfr274I CTCGAG 1 cut(s) 626
SinI GGWCC 2 cut(s) 1140, 2044
SlaI CTCGAG 1 cut(s) 626
SmiMI CAYNNNNRTG 2 cut(s) 583, 689
SmlI CTYRAG 3 cut(s) 626, 2021, 2048
SmoI CTYRAG 3 cut(s) 626, 2021, 2048
SpeI ACTAGT 1 cut(s) 4027
SphI GCATGC 1 cut(s) 3436
SseBI AGGCCT 1 cut(s) 2385
SsiI CCGC 6 cut(s) 652, 1598, 1707, 2065, 3097, 3596
SstI GAGCTC 1 cut(s) 2242
StuI AGGCCT 1 cut(s) 2385
StyD4I CCNGG 6 cut(s) 394, 1063, 1361, 1807, 2549, 3930
StyI CCWWGG 4 cut(s) 178, 202, 1516, 2380
TaiI ACGT 3 cut(s) 677, 824, 3280
TatI WGTACW 7 cut(s) 1219, 2494, 2580, 2607, 3052, 3946, 4165
TauI GCSGC 2 cut(s) 655, 1709
TfiI GAWTC 8 cut(s) 452, 1104, 1948, 2507, 3143, 3334, 3831, 3935
TseFI GTSAC 8 cut(s) 42, 467, 936, 1084, 1434, 1492, 2266, 2369
Tsp45I GTSAC 8 cut(s) 42, 467, 936, 1084, 1434, 1492, 2266, 2369
TspGWI ACGGA 6 cut(s) 714, 1418, 2049, 2364, 2519, 3731
Tth111I GACNNNGTC 1 cut(s) 3115
Van91I CCANNNNNTGG 1 cut(s) 3545
VneI GTGCAC 3 cut(s) 1233, 2139, 3527
VpaK11BI GGWCC 2 cut(s) 1140, 2044
VspI ATTAAT 2 cut(s) 2525, 2657
XagI CCTNNNNNAGG 1 cut(s) 1574
XapI RAATTY 9 cut(s) 592, 1372, 1746, 1792, 2375, 3212, 3397, 3442, 4100
XbaI TCTAGA 1 cut(s) 3838
XceI RCATGY 4 cut(s) 12, 1509, 3436, 3481
XcmI CCANNNNNNNNNTGG 1 cut(s) 2408
XhoI CTCGAG 1 cut(s) 626
XmiI GTMKAC 2 cut(s) 2729, 2922
XmnI GAANNNNTTC 2 cut(s) 639, 1974
ZrmI AGTACT 2 cut(s) 2582, 4167
Zsp2I ATGCAT 2 cut(s) 3434, 3483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.