RchiOBHm_Chr7g0195711

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0002044
Physical Location & Seq
Forward (+)
13504984 .. 13510990
6007 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17504

Sequence Viewer

Length: 4461 bp
ATGGCGGGAGGTTACTGGACCTTGCTCTGTGATTGTTCAACTGAGTCTGGAATTGAATGCAGTTCTGACATTGCAGCCATTATCAATCCAGATTCATGTATCAACAATATTGCGGTCATTGCAGTTGATATCTCGCTTCTATTCATCTTGTTTTGTATCTTCATCTATAGATTATCAAAGAAGGTTATAGCATCATCAGAGCCTTACACCTTCTCTGCTGTGTCAGTTGTTTCGGCCACTTTCAATGCCTGTTTGTCTTTGGCCTATTTGGGTTTTGGGATATGGAAAATGGTCGAGAAAGTAAACACAGATCAGACTTTTTTACCTCTGCATGGATGGCTAGTGTTTTTCTTTCAGGGGTTTACTTGGTTTATACTGGGATTAACCATAAACCTAAAGAAGCCACACCCTCCCTACATTGCAATAACAAAAGTGCTTTCAATTCTTGGCTTTTTTATTGCAGTTTTGCTTTGTGGTTCATCAATTTGGGAAACTATTCTTGATGAAGCAGTATCGGTTATGATTGTTTTGAACATTCTTTGTTTCCCTGGATCTGTTCTCTTGCTTTTTAGTGCGTTTGAGGGATGCAATGTTGCTAAAGGTGATCCACAAGTCCATGTTGACAATGCTCTGGACACACCTCTGCTGGGTGCAGAATCGGATATCGCAGGTGAAATTACTTCAAATCATGACAATGTTACTCCTTTTGCAAAAGCTGGTTTATTTAGTAGAATGTCATTTTGGTGGTTGAATCCATTACTGAAAAAAGGAAAGGGGAAGATTCTTGAGAATGAAGATATCCCACAGCTGAGAGAAGCTGATCAAGCACGAACATTGTACTTGATGTTTAAGGAGGAAGTGCAGAAAAGGAAGGAAAACATTTCATCTGATGATGAACCTTCTATTTTGTCCACAATTTTTTTCTGCCAGAGGAAAGCTATTCTGATTTCTGGTATCTTTGCACTCATCAAGGTTCTCACACTGACCAGCGGTCCACTGTTTCTGAGGGCCTTCATTAGGGTTGTTGGAGGAGAAGCAGCTTTTGAAGGTGAAGGATATGCCCTGACTGCTGGTCTCTTTGTGGTTAAAGTCGTGGAGTCATTGTCGGAGAGGCAATGGTTCTTCAGAACTAGACTTATTGGTCTCCAGGTAAGATCATTGATATCAGCAGCAATATATCAGAAGCAACTAAGACTCTCAAATGCTGCCAAGATGACTCATTCTCCTGGTGAGATAGTGAATTATGTGAGCGTGGATGCTTATAGAATCGGTGAATTTCCATTCTGGTTTCATCAGATATGGTCCACAAGTCTTCAGTTGCTTCTTTCATTACTTATCTTTTACTACTGCGTGGGGATAGCAACTCTTTCAGCTATAACTGTAATCATAGTGACTCTGCTGGGAAGCTCTCCATTAGCAAAGTTGCAGCATGAGTATCAAACTAAGCTCATGGTAGCACAGAACAAGAGGCTGAAGGCCATTACAGAAGCACTTTCCAATATGAAGATTTTGAAGCTGTATTCTTGGGAGACAAATTTCAAGAAGGTCATAGAAGGGTTGAGAACAGAAGAACTCAAATGGATAGCTAAAGTATTGTCACAAAAGGGATATTACAATGTTCTATTCTGGTCATCTCCTATTGTGGTAGCAGCTGTCACTTTTTGGACATGCTACTTCCTGGGATTTACACTCTCTGCTAGTAGTGCTTTCACATTTCTAGCAACTTTACGTATTGTTCAGGAGCCAATCAAGCTGATGCCGGATGTTTTTGGAGCATTTATCGAAGCCAAGGTTTCATTCTCTCGGATCGTGAAGTTCCTTGATGCACCAGAGTTGGAGCACAGAGATACAAGGAAAGAGAGCAGTGAAAAAGAGGTTGAGCATTCCATTTTGTTTAAATCCTTTAAAACCTCATGGGATACTGATGCTACAAAGGCCACATTGAGGGACATCAATTTGGTGGTAAAACCAGGAGAAAAAGTTGCCATTTGTGGTGAGGTTGGCTCAGGAAAATCAACCCTTTTAGCTGCAATTCTCGGTGAAGTGCCACGGATCAATGGTGTTGTTGAAGTATACGGCACAATAGCATATGTATCTCAGTCTGCATGGATCCAAACAGGAACTATACAAGAAAATATACTTTTTGGGACTCCCATGGATCATGTAAGATATCAAGAAACACTTCAAAAGTGTTCCTTGGTAAAGGACCTTGATATGCTTCCATTTGGGGATCGCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGCGGCCAGAAGCAGCGGATTCAACTTGCACGTGCACTCTATCAAAATGCTGATGTCTACCTCTTAGATGACCCTTTCAGTGCAGTTGATGCCCACACTGCGACCAGCCTGTTCAATGAATATGTCATGGGAGCTCTGGCTGAGAAGACAGTTCTGCTTGTCACACACCAAGTTGACTTCCTTCCTGCTTTTCATTCAATCTTGCTGATGTCGTCGGGGGAAATTTTAAAAGCAGCGCCTTATGATGAGTTGCTAACTTCTTGTCATGAGTTCCAAGACCTTGTGAATGCAAACAATGACACTGCTGGTTCAGAGAGGCCAAATGAAAATGCTTCTACAGAAAAATCATCTGCAAAGGAGATTGAGAAAGTAACTACTGAGGTACAGCTACAAGAGTCTGCAGGGGATCAATTGATTAAGAGAGAAGAGAGAGAAACAGGGGACATTGGTTTCAAGCCATACATTCAGTATTTGAAGCAGGGCAGGGGATTTTTCAACTTCTCCTTGTCAATTTTTCTCTACTCGATGTTCATAGTTGGGCAGTTACTTCAGTTTTATTGGTTGGCTTTGAACATTCAGGATTATAGTGTATCCAGAGTCAACCTCTATGCAGTTTATTCTGTGATCATGACTGTCATGATAGTCTCTTTGCTCATTCGATCTTTCTTTATAGTAGATTTAGGAGTTGGGGCAGGAAAGTCCATTTTTTCGACACTACTGAACTCTCTTTTCCGAGCACCAATGTTGTTTTATGACTCGACACCTGTGGGAAGAATACTTAGTCGGGTGTCGTCGGATATGAATATCATTGACCTTGAAGTAGCTTTCAAGTTGATAATTGCTGTTGGGGGAACCTTGAACACATACAGCATATTTCTAGTACTGGTTTATCTTACTTGGCCGATGGTGTTTCTAGTTGTCCCCACAATCTATATTACTATGCTCTTTCAGAACTACTACATGGCTTCTGCAAAAGAGTTGATGCGAATGAATGGCACAACTAAGTCTGCACTTGCAAGCCAGCTTGCCGAATCTATTGCTGGAGCCCTGACAATCAGAGCTTTCAGACAGGAGGACAGATTCTTCACAAAATACTTGGACTTTATCGATGCAAATGCTAGCACTGATTTCCATGGTTTTTCCACAAATGAGTGGTTGATCGAACGCCTGGAATTGCTATGTGCTATTGTTCTCTCAGCTGCAGCACTTGCCATTACTTTAACTACATATTCCTCTTCTTCCTCTGGGTTTATTGGGATGACACTGTCATATGGTCTCTCCTTAAATGTTTTCCTCGTAATTTCTGTCAAATTTCAGTGCATGCTAGCAAATTCAATCATTTCTGTAGAAAGGGTAGAGCAATACATGCATATTCCAAGTGAAGCTGCAGAAGTTATAGAAGACAACCGACCAATGCAAAATTGGCCTACTGTTGGTAAAGTGGAAATACATGATTTAAAGGTTAGATATAGGCCAAATGCTCCTCTCGTTCTTCGTGGGATAACTTGCACAATTGAAGGAGGGTACAAAGTGGGAATTGTTGGCCGGACTGGAAGTGGAAAGACAACTCTTATCAGTGTTTTGTTTCGACTTGTAGAGCCTACAGAGGGAAAGGTCATTGTAGATGGTTATGACATTTGCACAATTGGACTTCACGACTTAAGATCATGTTTTGGGATCATCCCTCAAGATCCCACTCTATTCAGTGGGTCTGTGAGGTTCAATCTAGACCCCTTATCGAAGCATACTGATCATGAGATATGGCAGGTGCTTGAGAAATGTCAGTTACGAGAGGCCATTCAAGAAAAAGCAGAGGGCCTGGATTCTTTAGTTGTACAAGATGGAACAAACTGGAGCATGGGACAGCGACAACTGTTCTGTTTGGGGCGTGCTTTGTTAAAGAGGAGCAGAATACTAGTGCTCGATGAAGCTACTGCATCAATGGACAATGCAACAGACTCTATTCTCCAGAAAACTATAAGAACAGAATTTGCTGACTGCACTGTAATAACAGTGGCACATAGGATACCAACTGTCATGGACTGCACCAAGGTGCTTGCTATTGCTGATGGTAAACTGGTAGAGTATGATGAGCCAACGAAGCTGATGAACAATGAGGGATCATTATTTGGGCAGCTTGTCAAGGAATACTGGTCTCGTTCTGCCAATGTCGGCATCCACTCTGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1486

Amino Acids

165.64

Weight (kDa)

5.8

Isoelectric Point (pI)

32.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 4 - 197 6.7e-64 ABCC10 N-terminal domain
ABC_membrane PF00664 314 - 582 6.4e-24 ABC transporter transmembrane region
ABC_tran PF00005 648 - 782 4.6e-22 ABC transporter
ABC_membrane PF00664 926 - 1180 6.2e-25 ABC transporter transmembrane region
ABC_tran PF00005 1254 - 1402 2.6e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 659, 4024
AasI GACNNNNNNGTC 1 cut(s) 1140
Acc36I ACCTGC 2 cut(s) 659, 4024
AccI GTMKAC 2 cut(s) 2073, 2325
AciI CCGC 5 cut(s) 5, 113, 990, 2271, 2284
AcoI YGGCCR 4 cut(s) 234, 2272, 3167, 3811
AcsI RAATTY 6 cut(s) 1274, 1534, 2490, 3578, 3598, 4256
AcuI CTGAAG 4 cut(s) 1108, 1298, 1493, 2801
AcvI CACGTG 1 cut(s) 2300
AfaI GTAC 5 cut(s) 839, 2652, 3150, 3794, 4104
AfiI CCNNNNNNNGG 6 cut(s) 332, 647, 1017, 1944, 3701, 3875
AflII CTTAAG 1 cut(s) 3928
AhdI GACNNNNNGTC 2 cut(s) 990, 1071
AhlI ACTAGT 1 cut(s) 4183
AjnI CCWGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3435, 4086
AjuI GAANNNNNNNTTGG 4 cut(s) 724, 756, 1781, 1813
AleI CACNNNNGTG 1 cut(s) 4319
Alw21I GWGCWC 5 cut(s) 1842, 2305, 2404, 3007, 4191
Alw26I GTCTC 6 cut(s) 1079, 1148, 1523, 2917, 3548, 4428
Alw44I GTGCAC 1 cut(s) 2301
ApaLI GTGCAC 1 cut(s) 2301
ApoI RAATTY 6 cut(s) 1274, 1534, 2490, 3578, 3598, 4256
Asp700I GAANNNNTTC 2 cut(s) 495, 2181
AspLEI GCGC 1 cut(s) 2506
AspS9I GGNCC 6 cut(s) 18, 992, 1008, 1302, 2206, 4084
AsuHPI GGTGA 7 cut(s) 614, 683, 1061, 1241, 1283, 2006, 2051
AsuNHI GCTAGC 2 cut(s) 3386, 3592
AvaII GGWCC 4 cut(s) 18, 992, 1302, 2206
BaeGI GKGCMC 1 cut(s) 2305
BamHI GGATCC 1 cut(s) 2109
BanII GRGCYC 2 cut(s) 2404, 3316
BbrPI CACGTG 1 cut(s) 2300
BbsI GAAGAC 3 cut(s) 1304, 2420, 3675
Bbv12I GWGCWC 5 cut(s) 1842, 2305, 2404, 3007, 4191
BccI CCATC 5 cut(s) 330, 3166, 3887, 4103, 4331
BceAI ACGGC 1 cut(s) 2092
BcgI CGANNNNNNTGC 4 cut(s) 3287, 3321, 3365, 3399
BciT130I CCWGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3437, 4088
BciVI GTATCC 3 cut(s) 1912, 2869, 4287
BclI TGATCA 3 cut(s) 820, 2892, 4018
BcoDI GTCTC 6 cut(s) 1079, 1148, 1523, 2917, 3548, 4428
BcuI ACTAGT 1 cut(s) 4183
BfmI CTRYAG 7 cut(s) 166, 2604, 2667, 3468, 3612, 3654, 3870
BfoI RGCGCY 1 cut(s) 2507
BfrI CTTAAG 1 cut(s) 3928
BfuAI ACCTGC 2 cut(s) 659, 4024
BfuI GTATCC 3 cut(s) 1912, 2869, 4287
BmcAI AGTACT 1 cut(s) 3150
Bme1390I CCNGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3437, 4088
Bme18I GGWCC 4 cut(s) 18, 992, 1302, 2206
BmeRI GACNNNNNGTC 2 cut(s) 990, 1071
BmgT120I GGNCC 6 cut(s) 18, 992, 1008, 1302, 2206, 4084
BmiI GGNNCC 4 cut(s) 1743, 2111, 3121, 3313
BmrFI CCNGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3437, 4088
BmrI ACTGGG 1 cut(s) 386
BmtI GCTAGC 2 cut(s) 3390, 3596
BmuI ACTGGG 1 cut(s) 386
BpiI GAAGAC 3 cut(s) 1304, 2420, 3675
BplI GAGNNNNNCTC 4 cut(s) 1988, 2020, 2856, 2888
BpmI CTGGAG 4 cut(s) 1130, 3330, 4141, 4220
Bpu10I CCTNAGC 1 cut(s) 2005
BpuEI CTTGAG 3 cut(s) 806, 3939, 4061
Bsa29I ATCGAT 1 cut(s) 3375
BsaAI YACGTR 2 cut(s) 1730, 2300
BsaI GGTCTC 4 cut(s) 1079, 1148, 3548, 4428
BsaJI CCNNGG 8 cut(s) 547, 1678, 1788, 2048, 2154, 2196, 3400, 4317
BsaXI ACNNNNNCTCC 6 cut(s) 1088, 1118, 1207, 1237, 1965, 1995
Bsc4I CCNNNNNNNGG 6 cut(s) 332, 647, 1017, 1944, 3701, 3875
Bse1I ACTGG 7 cut(s) 20, 381, 3156, 3823, 4124, 4350, 4424
Bse3DI GCAATG 5 cut(s) 69, 117, 417, 595, 1121
BseBI CCWGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3437, 4088
BseCI ATCGAT 1 cut(s) 3375
BseDI CCNNGG 8 cut(s) 547, 1678, 1788, 2048, 2154, 2196, 3400, 4317
BseGI GGATG 7 cut(s) 341, 590, 1261, 1768, 3531, 3948, 4443
BseLI CCNNNNNNNGG 6 cut(s) 332, 647, 1017, 1944, 3701, 3875
BseMI GCAATG 5 cut(s) 69, 117, 417, 595, 1121
BseMII CTCAG 9 cut(s) 33, 800, 995, 2019, 2111, 2252, 2400, 2637, 3477
BseNI ACTGG 7 cut(s) 20, 381, 3156, 3823, 4124, 4350, 4424
BseRI GAGGAG 3 cut(s) 1044, 3741, 4186
BseSI GKGCMC 1 cut(s) 2305
BseYI CCCAGC 2 cut(s) 646, 1399
BsgI GTGCAG 6 cut(s) 672, 881, 2370, 3261, 4252, 4297
BshVI ATCGAT 1 cut(s) 3375
BsiHKAI GWGCWC 5 cut(s) 1842, 2305, 2404, 3007, 4191
BsiSI CCGG 2 cut(s) 1760, 3814
BslFI GGGAC 5 cut(s) 1961, 2161, 2723, 3173, 4143
BslI CCNNNNNNNGG 6 cut(s) 332, 647, 1017, 1944, 3701, 3875
BsmAI GTCTC 6 cut(s) 1079, 1148, 1523, 2917, 3548, 4428
BsmFI GGGAC 5 cut(s) 1961, 2161, 2723, 3173, 4143
BsmI GAATGC 3 cut(s) 62, 1882, 2560
Bso31I GGTCTC 4 cut(s) 1079, 1148, 3548, 4428
Bsp1286I GDGCHC 6 cut(s) 1842, 2305, 2404, 3007, 3316, 4191
Bsp1407I TGTACA 1 cut(s) 4102
Bsp19I CCATGG 2 cut(s) 2154, 3400
BspACI CCGC 5 cut(s) 5, 113, 990, 2271, 2284
BspCNI CTCAG 9 cut(s) 34, 801, 996, 2018, 2110, 2251, 2401, 2638, 3476
BspDI ATCGAT 1 cut(s) 3375
BspHI TCATGA 5 cut(s) 688, 2533, 2895, 2904, 4021
BspLI GGNNCC 4 cut(s) 1743, 2111, 3121, 3313
BspMAI CTGCAG 3 cut(s) 2671, 3472, 3658
BspMI ACCTGC 2 cut(s) 659, 4024
BspOI GCTAGC 2 cut(s) 3390, 3596
BspTI CTTAAG 1 cut(s) 3928
BspTNI GGTCTC 4 cut(s) 1079, 1148, 3548, 4428
BsrDI GCAATG 5 cut(s) 69, 117, 417, 595, 1121
BsrGI TGTACA 1 cut(s) 4102
BsrI ACTGG 7 cut(s) 20, 381, 3156, 3823, 4124, 4350, 4424
BssECI CCNNGG 8 cut(s) 547, 1678, 1788, 2048, 2154, 2196, 3400, 4317
BssNAI GTATAC 1 cut(s) 2074
BssT1I CCWWGG 5 cut(s) 1788, 2154, 2196, 3400, 4317
Bst1107I GTATAC 1 cut(s) 2074
Bst2UI CCWGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3437, 4088
Bst6I CTCTTC 2 cut(s) 2688, 3508
BstAFI CTTAAG 1 cut(s) 3928
BstAPI GCANNNNNTGC 3 cut(s) 2357, 3476, 3634
BstAUI TGTACA 1 cut(s) 4102
BstBAI YACGTR 2 cut(s) 1730, 2300
BstC8I GCNNGC 8 cut(s) 3286, 3290, 3294, 3388, 3590, 3594, 4158, 4326
BstDSI CCRYGG 3 cut(s) 2048, 2154, 3400
BstENI CCTNNNNNAGG 1 cut(s) 1015
BstF5I GGATG 7 cut(s) 341, 590, 1261, 1768, 3531, 3948, 4443
BstH2I RGCGCY 1 cut(s) 2507
BstHHI GCGC 1 cut(s) 2506
BstMAI GTCTC 6 cut(s) 1079, 1148, 1523, 2917, 3548, 4428
BstNI CCWGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3437, 4088
BstNSI RCATGY 3 cut(s) 1671, 3592, 3637
BstSCI CCNGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3435, 4086
BstSFI CTRYAG 7 cut(s) 166, 2604, 2667, 3468, 3612, 3654, 3870
BstSLI GKGCMC 1 cut(s) 2305
BstSNI TACGTA 1 cut(s) 1730
BstV2I GAAGAC 3 cut(s) 1304, 2420, 3675
BstX2I RGATCY 3 cut(s) 551, 2109, 3958
BstYI RGATCY 3 cut(s) 551, 2109, 3958
BstZ17I GTATAC 1 cut(s) 2074
Bsu15I ATCGAT 1 cut(s) 3375
BsuI GTATCC 3 cut(s) 1912, 2869, 4287
BsuTUI ATCGAT 1 cut(s) 3375
BtgI CCRYGG 3 cut(s) 2048, 2154, 3400
BtsCI GGATG 7 cut(s) 341, 590, 1261, 1768, 3531, 3948, 4443
BtsI GCAGTG 3 cut(s) 1870, 2364, 2568
BveI ACCTGC 2 cut(s) 659, 4024
Cac8I GCNNGC 8 cut(s) 3286, 3290, 3294, 3388, 3590, 3594, 4158, 4326
CciI TCATGA 5 cut(s) 688, 2533, 2895, 2904, 4021
CfoI GCGC 1 cut(s) 2506
Cfr13I GGNCC 6 cut(s) 18, 992, 1008, 1302, 2206, 4084
ClaI ATCGAT 1 cut(s) 3375
Csp6I GTAC 5 cut(s) 838, 2651, 3149, 3793, 4103
CspCI CAANNNNNGTGG 2 cut(s) 2248, 2283
CviQI GTAC 5 cut(s) 838, 2651, 3149, 3793, 4103
DraI TTTAAA 4 cut(s) 1897, 1906, 2496, 3726
DrdI GACNNNNNNGTC 1 cut(s) 1140
DriI GACNNNNNGTC 2 cut(s) 990, 1071
DseDI GACNNNNNNGTC 1 cut(s) 1140
EaeI YGGCCR 4 cut(s) 234, 2272, 3167, 3811
Eam1104I CTCTTC 2 cut(s) 2688, 3508
Eam1105I GACNNNNNGTC 2 cut(s) 990, 1071
EarI CTCTTC 2 cut(s) 2688, 3508
Ecl136II GAGCTC 1 cut(s) 2402
Eco105I TACGTA 1 cut(s) 1730
Eco130I CCWWGG 5 cut(s) 1788, 2154, 2196, 3400, 4317
Eco24I GRGCYC 2 cut(s) 2404, 3316
Eco31I GGTCTC 4 cut(s) 1079, 1148, 3548, 4428
Eco32I GATATC 5 cut(s) 130, 664, 799, 1164, 2171
Eco47I GGWCC 4 cut(s) 18, 992, 1302, 2206
Eco53kI GAGCTC 1 cut(s) 2402
Eco57I CTGAAG 4 cut(s) 1108, 1298, 1493, 2801
Eco72I CACGTG 1 cut(s) 2300
EcoICRI GAGCTC 1 cut(s) 2402
EcoNI CCTNNNNNAGG 1 cut(s) 1015
EcoO109I RGGNCCY 3 cut(s) 1008, 2206, 4084
EcoRII CCWGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3435, 4086
EcoRV GATATC 5 cut(s) 130, 664, 799, 1164, 2171
EcoT14I CCWWGG 5 cut(s) 1788, 2154, 2196, 3400, 4317
EcoT22I ATGCAT 1 cut(s) 3639
EcoT38I GRGCYC 2 cut(s) 2404, 3316
ErhI CCWWGG 5 cut(s) 1788, 2154, 2196, 3400, 4317
FalI AAGNNNNNCTT 4 cut(s) 2166, 2198, 2180, 2212
FaqI GGGAC 5 cut(s) 1961, 2161, 2723, 3173, 4143
FauNDI CATATG 2 cut(s) 2089, 3538
FbaI TGATCA 3 cut(s) 820, 2892, 4018
FblI GTMKAC 2 cut(s) 2073, 2325
FokI GGATG 7 cut(s) 348, 597, 1268, 1775, 3538, 3935, 4430
FriOI GRGCYC 2 cut(s) 2404, 3316
GlaI GCGC 1 cut(s) 2505
GsaI CCCAGC 2 cut(s) 650, 1403
GsuI CTGGAG 4 cut(s) 1130, 3330, 4141, 4220
HaeII RGCGCY 1 cut(s) 2507
HapII CCGG 2 cut(s) 1760, 3814
HhaI GCGC 1 cut(s) 2506
Hin6I GCGC 1 cut(s) 2504
HinP1I GCGC 1 cut(s) 2504
HincII GTYRAC 3 cut(s) 622, 2443, 2869
HindII GTYRAC 3 cut(s) 622, 2443, 2869
HpaII CCGG 2 cut(s) 1760, 3814
HphI GGTGA 7 cut(s) 614, 683, 1061, 1241, 1283, 2006, 2051
Hpy99I CGWCG 2 cut(s) 2485, 3064
HpyCH4IV ACGT 2 cut(s) 1729, 2299
HpySE526I ACGT 2 cut(s) 1729, 2299
HspAI GCGC 1 cut(s) 2504
Ksp22I TGATCA 3 cut(s) 820, 2892, 4018
LmnI GCTCC 8 cut(s) 1741, 1772, 1837, 2399, 3311, 3754, 4122, 4173
MaeII ACGT 2 cut(s) 1729, 2299
MaeIII GTNAC 9 cut(s) 11, 697, 1390, 1596, 1654, 2428, 2638, 2811, 4053
MfeI CAATTG 3 cut(s) 2678, 3780, 3912
MflI RGATCY 3 cut(s) 551, 2109, 3958
MhlI GDGCHC 6 cut(s) 1842, 2305, 2404, 3007, 3316, 4191
MmeI TCCRAC 4 cut(s) 1006, 1086, 1815, 3042
Mph1103I ATGCAT 1 cut(s) 3639
MroXI GAANNNNTTC 2 cut(s) 495, 2181
MslI CAYNNNNRTG 3 cut(s) 693, 742, 4319
MspA1I CMGCKG 5 cut(s) 808, 990, 1652, 2284, 3467
MspCI CTTAAG 1 cut(s) 3928
MspI CCGG 2 cut(s) 1760, 3814
MspR9I CCNGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3437, 4088
MunI CAATTG 3 cut(s) 2678, 3780, 3912
Mva1269I GAATGC 3 cut(s) 62, 1882, 2560
MvaI CCWGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3437, 4088
NcoI CCATGG 2 cut(s) 2154, 3400
NdeI CATATG 2 cut(s) 2089, 3538
NheI GCTAGC 2 cut(s) 3386, 3592
NlaIV GGNNCC 4 cut(s) 1743, 2111, 3121, 3313
NmuCI GTSAC 4 cut(s) 1390, 1596, 1654, 2428
NsiI ATGCAT 1 cut(s) 3639
NspI RCATGY 3 cut(s) 1671, 3592, 3637
OliI CACNNNNGTG 1 cut(s) 4319
PaeI GCATGC 1 cut(s) 3592
PagI TCATGA 5 cut(s) 688, 2533, 2895, 2904, 4021
PaqCI CACCTGC 2 cut(s) 659, 4024
PctI GAATGC 3 cut(s) 62, 1882, 2560
PdmI GAANNNNTTC 2 cut(s) 495, 2181
PfeI GAWTC 9 cut(s) 92, 656, 751, 781, 1266, 2287, 3299, 3348, 4091
PflFI GACNNNGTC 1 cut(s) 3532
PmaCI CACGTG 1 cut(s) 2300
PmlI CACGTG 1 cut(s) 2300
Ppu21I YACGTR 2 cut(s) 1730, 2300
PpuMI RGGWCCY 1 cut(s) 2206
Psp124BI GAGCTC 1 cut(s) 2404
Psp5II RGGWCCY 1 cut(s) 2206
Psp6I CCWGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3435, 4086
PspCI CACGTG 1 cut(s) 2300
PspFI CCCAGC 2 cut(s) 646, 1399
PspGI CCWGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3435, 4086
PspN4I GGNNCC 4 cut(s) 1743, 2111, 3121, 3313
PspPI GGNCC 6 cut(s) 18, 992, 1008, 1302, 2206, 4084
PspPPI RGGWCCY 1 cut(s) 2206
PstI CTGCAG 3 cut(s) 2671, 3472, 3658
PsuI RGATCY 3 cut(s) 551, 2109, 3958
PsyI GACNNNGTC 1 cut(s) 3532
PvuII CAGCTG 3 cut(s) 808, 1652, 3467
RsaI GTAC 5 cut(s) 839, 2652, 3150, 3794, 4104
RsaNI GTAC 5 cut(s) 838, 2651, 3149, 3793, 4103
RseI CAYNNNNRTG 3 cut(s) 693, 742, 4319
SacI GAGCTC 1 cut(s) 2404
Sau96I GGNCC 6 cut(s) 18, 992, 1008, 1302, 2206, 4084
ScaI AGTACT 1 cut(s) 3150
ScrFI CCNGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3437, 4088
SduI GDGCHC 6 cut(s) 1842, 2305, 2404, 3007, 3316, 4191
SfcI CTRYAG 7 cut(s) 166, 2604, 2667, 3468, 3612, 3654, 3870
SinI GGWCC 4 cut(s) 18, 992, 1302, 2206
SmiMI CAYNNNNRTG 3 cut(s) 693, 742, 4319
SmlI CTYRAG 4 cut(s) 785, 3928, 3954, 4040
SmoI CTYRAG 4 cut(s) 785, 3928, 3954, 4040
SnaBI TACGTA 1 cut(s) 1730
SpeI ACTAGT 1 cut(s) 4183
SphI GCATGC 1 cut(s) 3592
SsiI CCGC 5 cut(s) 5, 113, 990, 2271, 2284
SspI AATATT 1 cut(s) 109
SstI GAGCTC 1 cut(s) 2404
StyD4I CCNGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3435, 4086
StyI CCWWGG 5 cut(s) 1788, 2154, 2196, 3400, 4317
TaiI ACGT 2 cut(s) 1732, 2302
TatI WGTACW 3 cut(s) 837, 3148, 4102
TauI GCSGC 1 cut(s) 2274
TfiI GAWTC 9 cut(s) 92, 656, 751, 781, 1266, 2287, 3299, 3348, 4091
TseFI GTSAC 4 cut(s) 1390, 1596, 1654, 2428
Tsp45I GTSAC 4 cut(s) 1390, 1596, 1654, 2428
TspGWI ACGGA 1 cut(s) 2065
Tth111I GACNNNGTC 1 cut(s) 3532
Vha464I CTTAAG 1 cut(s) 3928
VneI GTGCAC 1 cut(s) 2301
VpaK11BI GGWCC 4 cut(s) 18, 992, 1302, 2206
XagI CCTNNNNNAGG 1 cut(s) 1015
XapI RAATTY 6 cut(s) 1274, 1534, 2490, 3578, 3598, 4256
XbaI TCTAGA 1 cut(s) 3994
XceI RCATGY 3 cut(s) 1671, 3592, 3637
XcmI CCANNNNNNNNNTGG 1 cut(s) 3687
XmiI GTMKAC 2 cut(s) 2073, 2325
XmnI GAANNNNTTC 2 cut(s) 495, 2181
ZrmI AGTACT 1 cut(s) 3150
Zsp2I ATGCAT 1 cut(s) 3639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.