RLG00000004092

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0002044
Physical Location & Seq
Reverse (-)
56125207 .. 56131086
5880 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004092

Sequence Viewer

Length: 4236 bp
ATGGCGGAAGGTTTCTGGACCTTGTTTTGTGATTGTTCAACTGAGTCTGGAATTGAATGCAGCTCTGACATTGCAGCCATTATCAATCCAGATTCATGTATCAACAATATTGCGGTCATTGCAGTTGATATCTTGCTTCTGTTCATCTTGTTTTGTATCTTCATCTATAGAACATTATCAAAGAAGGTTATTGCGTCATCAGAGTCTTACACCTTCTCTGCTGTGTCAATTGTTTCAGCCACTTTCAATGCCTGTTTGTCTTTGGCCTATTTGGGTTTTGGGATATGGAAAACGATCGAGAAAGTAAATACAGATCAGACTTGTTTACCTCTGCATGGATGGATAGTATTTTTCTTTCAGGGGTTTACTTGGTTGGTGCTGGGATTAACCATAAACCTGAAGAAGCCAAACCCTCCCCAAATTGCGATAACGAAAGTTCTTTCAATTCTTGGCTTTTTTATTGCAGTTTTTCTTTGTGGTTCATCGATTTGGGAAGCAACTCTTGATGAAGCAGTATCGGTTATGATTGTTTTGGACGTTCTTTGTTTTCCTGGATCAGTTCTCTTGCTTTTTAGTGCATTTGATGGAAGCAATGTTGCTAAAGGTGATCCACAAGTCCATGTTGACGATGCTTTGCATACACCTTTGCTGGGTGCAGAATCGGATATCGCAGGTGAAATCACTTCAAATCATGACAATAGGAAAGCTATATTAATTTCTGGTATATTTGCACTCATCAAGGTTCTCACACTGACTAGCGGTCCTCTGTTTCTGATGGCCTTCATTAGTGTCGTTGAAGGAGAAGCAGCTTTTGAAGGTGAAGGCTATGCACTGACAGCTGGTCTCTTTGTGGTTAAAGTCGTGGAGTCATTGTCGGAGAGGCAATGGTTCTTCAGAACTAGACTTATTGGTCTCCAGGTAAGATCATTGATATCTGCAGCAATATATCAGAAGCAACTAAGACTCTCAAATGCTGCCAAGATGACTCATTCTCCTGGTGAGATAGTGAATTATGTGAGCGTGGATGCTTACAGAATCGGTGAATTTCCATTCTGGTTTCATCAGATATGGTCCACAAGCCTTCAGCTCTGTCTCTCATTACTTATTGTTTACTTCTCTGTTGGAATAGCAACTCTCGCAGCTCTAACTGTGCTCATATTGATTGTGCTGGCAAGCTCTCCATTGGTCAAGTTGCAGCATGAGTATCAAACAAAGTTCATGGTGGCTCAAAATAAGAGGCTGAAGGCCATAACAGAAGCACTATCAAATATGAAGATCTTGAAGCTGTATTCATGGGAGACAAATTTCAAGAAAGTCATAGAAGGGTTAAGAGCAGAAGAACTCAAATGGATAAATAAAGTACTGTTACAAAAGGGGTATTATATCACTTTGTTCTGGTCATCTCCTATTTTGGTAGCAGCCGTTACCTTTTGGACGTGCTACTTCCTGGGAATTACACTCACTGCTAGTAATGTTTTCACATTTCTAGCAACTTTGCGTATTGTTCAGGAGCCAATTAGGCTTATCCCAGATATTTTTGGATCATTTATTGAAGCCAAGGTCTCATTCTCGCGCATTGTGAAGTTCCTTGATGCACAGGAGTTGGAGAACAGAGATACAAGGAAAGAGAATACTGGCAAAGAGGCTGAGCATTCCATTTTCATTAGAGCCTCCGAAATTTCATGGGACACTAATGCAACCAAGGCCACATTAAGGAACTTGAACTTGGTGGTTGAACCGGGAGAAAAAGTAGCTCTTTGTGGAGAGGTTGGCTCCGGTAAATCAACCCTTTTAGCTGCAATTCTCGGAGAAGTTCCCCTTATCAATGGTGTTGTTCAAGTGCATGGGAAGATAGCATATGTTCCTCAATCGGCATGGATTCAAACAGGAAGTATACAAGAAAATATTCTGTTTGGATCCACCATGGATCATGTCAGGTACCAAGAGACGCTTGATAAGTGTTCGCTAGTTAAGGATCTAGAGATCCTTCCATTTGGAGATCTCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGTGGCCAAAAGCAGCGCATTCAACTTGCGCGTGCCCTCTATCAAAATGCTGATGTCTATCTCTTGGATGACCCTTTCAGTGCAGTTGATGCTCATACTGCAAGCAGCCTATTCAATGATTATGTCATGGGAGCTCTGGCAAAGAAGACGGTGTTGCTTGTGACACATCAAGTTGACTTCCTTCCGGTTTTTAGTTCTATTTTGTTGATGTCTTCAGGGCAAATTTTAAGGGCAGGACCTTACAAAGAGTTGTTGGCTTCTTGTCAAGAGTTCCAAGACCTTGTCAATGCACATAATGACACTGCTGGTTCCGAGAGTCAAGTTGAATATGCTGCTACCAGAAAACATAAATCATCTGACAAGGAGGTTGAAAAAATTAATACTGAGATACAGTTCAAAGAATCTTCAGGAGATCAATTGATTAAAAAAGAAGAGAGAGAAACAGGAGACACTGGTTTCAAGCCATACATTCAGTATTTGAAGCATAGCAAGGGATTTTTTCACTTCTCCTCATCAATCTTTTTCCACGTGATATTCATACTGGGGCAATTAGTACAGGCTTATTGGTTGGCTTCGAATCTTCAGGATTATAAGGTATCAAGAGTCGAGCTCTTCGGAGTTTATTCATTGATCATGTGTATCATTTCATTCTGTTTGCTTCTACGCTCTCTTAAGGTAGTCCAATTAGGATGTGGAGCATCAAGATCCATTTTCTTTACACTACTGAACTCCCTTTTCCGAGCACCAATGCTGTTTTACGATTCAACACCTCTGGGGAGGATACTTAGTCGAGTATCTCTAGATATGAATATCATTGACCTTGAAGTAGCTTTAAAGCTATCCATAGCTGTTGGGACAACTCTGAATGCTTATAGCATATTCTTAGTGATGATTTATCTTACTTGGCCACTCGTGTTTCTGATTATACCGACACTTTATGCTACCTTTCGCTTTCAGAAATACTACTTTTCATCTGCAAAAGAGTTAATGCGAATGAATGGCACGACTAAGTCTGCACTTGCAAGCCACATTTCTGAATCTGTTGCTGGAGCTGTGACAATCAGAGCTTTTGGAGAGGAGGAAAGATTTTTCTCCAAAAACTTGGAATTCATTGATGCAAATTCTAGTGCTGACTTCAATAGCTTTTCAACAAATGAATGGTTAATTCAACGTCTAGAATTGCTTAGCGCCATTGTTCTCTCAGCCTCAACACTTGCCATTACTTTGACTCAATTTGATGCTTCTTCCTCTGGATTTATTGGGATGACACTATCATATGGCCTTTCATTAAATGTATTCCTAGTAATTTCTGTCCAATATCAGTGCATGCTAGCAAATTCAATAATTTCTGTAGAAAGGGTGGAACAATACATGCACATTCCCAGCGAAGCCGATGAAGTAATAGAAGAAAACCGACCCGCACACAATTGGCCTATTGTTGGTAAAGTGGAAATACATGACTTAAAGGTAAGATATAGGCCAAATTCTCCTTTTGTTCTCCACGGGATAAATTGCATCATTGAGGGAGGCTACAAAATTGGAATTGTTGGCCGGACTGGAAGTGGAAAGACAACTCTTGTCAGCGTTTTGTTTCGTCTGGTAGAGCCAACAGAGGGAAAAGTCATTGTAGATGGCTATGACATTTGTACAATTGGCCTTCATGATTTGAGATCACGTTTTGGGATCATCCCTCAAGATCCAACATTATTCAGTGGGTCTGTGAGATTCAATCTGGACCCCTTATCAGAGCATACTGATCGTGAGATATGGGAGGTTCTTGAGAAATGTCAGTTACGAGAGGCCATCAGAGAAAAAGAAGAGGGCTTGGATTCTTTAGTTGTGGAAGATGGAACAAACTGGAGCATGGGACAGCGACAGCTATTCTGCTTGGGGCGCGCTTTATTGAAGAGGAGCCGAATACTAGTGCTGGATGAAGCTACTGCATCGATGGACAATACAACAGACTCTATTCTGCAGAAAACTATAAGTGCGGAATTTGTAGACTCCACTGTTATAACAGTGGCCCATAGGATACCAACCGTGATGGACTGCACTAAGGTGCTTGCTCTTAGTGATGGTAAAGTAGTGGAGTATGATGAGCCAATCAAGCTGATGAACAATGAGGGATCACTGTTCGGGCAGCTTGTCAAGGAATATTGGTCTCGTTCTGCCAAAGCTAGTATGCACTCAGAGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1412

Amino Acids

157.06

Weight (kDa)

5.73

Isoelectric Point (pI)

31.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 3 - 198 3.2e-69 ABCC10 N-terminal domain
ABC_membrane PF00664 237 - 505 2.3e-26 ABC transporter transmembrane region
ABC_tran PF00005 571 - 705 3.4e-22 ABC transporter
ABC_membrane PF00664 851 - 1104 8.6e-26 ABC transporter transmembrane region
ABC_tran PF00005 1179 - 1327 1.2e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2628, 4052
AarI CACCTGC 1 cut(s) 662
AasI GACNNNNNNGTC 1 cut(s) 909
Acc36I ACCTGC 1 cut(s) 662
Acc65I GGTACC 1 cut(s) 1938
AccB1I GGYRCC 1 cut(s) 1938
AccI GTMKAC 2 cut(s) 1894, 4038
AccII CGCG 3 cut(s) 1573, 2068, 3933
AciI CCGC 5 cut(s) 5, 113, 759, 3456, 4028
AcoI YGGCCR 3 cut(s) 2041, 2942, 3586
AcsI RAATTY 9 cut(s) 1043, 1303, 1677, 2259, 3143, 3157, 3373, 3520, 4031
AcuI CTGAAG 7 cut(s) 419, 877, 1067, 1262, 2235, 2427, 2603
AcvI CACGTG 1 cut(s) 2566
AfaI GTAC 4 cut(s) 1362, 1940, 2592, 3685
AfiI CCNNNNNNNGG 5 cut(s) 335, 650, 1713, 3476, 3650
AflII CTTAAG 1 cut(s) 2708
AhdI GACNNNNNGTC 2 cut(s) 759, 840
AhlI ACTAGT 1 cut(s) 3958
AjiI CACGTC 1 cut(s) 1437
AjnI CCWGG 4 cut(s) 550, 915, 994, 1446
AjuI GAANNNNNNNTTGG 4 cut(s) 1550, 1582, 1709, 1741
AleI CACNNNNGTG 1 cut(s) 4094
Alw21I GWGCWC 4 cut(s) 1155, 2173, 2649, 2782
Alw26I GTCTC 8 cut(s) 848, 917, 1097, 1292, 1567, 1940, 2478, 4203
ApoI RAATTY 9 cut(s) 1043, 1303, 1677, 2259, 3143, 3157, 3373, 3520, 4031
AseI ATTAAT 2 cut(s) 713, 2415
Asp700I GAANNNNTTC 1 cut(s) 1905
Asp718I GGTACC 1 cut(s) 1938
AspLEI GCGC 6 cut(s) 1575, 2055, 2068, 3227, 3933, 3935
AspS9I GGNCC 6 cut(s) 18, 761, 1071, 2273, 3772, 4060
AsuC2I CCSGG 1 cut(s) 1740
AsuHPI GGTGA 5 cut(s) 617, 686, 830, 1010, 1052
AsuII TTCGAA 1 cut(s) 2612
AsuNHI GCTAGC 1 cut(s) 3367
AvaII GGWCC 5 cut(s) 18, 761, 1071, 2273, 3772
BaeGI GKGCMC 1 cut(s) 2074
BalI TGGCCA 2 cut(s) 2043, 2944
BamHI GGATCC 1 cut(s) 1916
BanI GGYRCC 1 cut(s) 1938
BanII GRGCYC 2 cut(s) 2173, 2649
BauI CACGAG 1 cut(s) 2948
BbrPI CACGTG 1 cut(s) 2566
BbsI GAAGAC 2 cut(s) 2189, 2241
Bbv12I GWGCWC 4 cut(s) 1155, 2173, 2649, 2782
BccI CCATC 9 cut(s) 333, 578, 769, 3662, 3848, 3878, 3979, 4075, 4106
BceAI ACGGC 1 cut(s) 1406
BcgI CGANNNNNNTGC 2 cut(s) 3776, 3810
BciT130I CCWGG 4 cut(s) 552, 917, 996, 1448
BciVI GTATCC 2 cut(s) 2811, 4062
BclI TGATCA 1 cut(s) 2667
BcnI CCSGG 1 cut(s) 1740
BcoDI GTCTC 8 cut(s) 848, 917, 1097, 1292, 1567, 1940, 2478, 4203
BcuI ACTAGT 1 cut(s) 3958
BfmI CTRYAG 4 cut(s) 166, 936, 3387, 4010
BfoI RGCGCY 1 cut(s) 3228
BfrI CTTAAG 1 cut(s) 2708
BfuAI ACCTGC 1 cut(s) 662
BfuI GTATCC 2 cut(s) 2811, 4062
BglI GCCNNNNNGGC 1 cut(s) 1519
BglII AGATCT 2 cut(s) 1275, 1999
BlpI GCTNAGC 2 cut(s) 1647, 3221
BmcAI AGTACT 1 cut(s) 1362
Bme1390I CCNGG 5 cut(s) 552, 917, 996, 1448, 1740
Bme18I GGWCC 5 cut(s) 18, 761, 1071, 2273, 3772
BmeRI GACNNNNNGTC 2 cut(s) 759, 840
BmgBI CACGTC 1 cut(s) 1437
BmgT120I GGNCC 6 cut(s) 18, 761, 1071, 2273, 3772, 4060
BmiI GGNNCC 7 cut(s) 1512, 1774, 1918, 1940, 2347, 3774, 3950
BmrFI CCNGG 5 cut(s) 552, 917, 996, 1448, 1740
BmrI ACTGGG 1 cut(s) 2588
BmsI GCATC 9 cut(s) 619, 1015, 1582, 2116, 2744, 3142, 3265, 3561, 3989
BmtI GCTAGC 1 cut(s) 3371
BmuI ACTGGG 1 cut(s) 2588
BpiI GAAGAC 2 cut(s) 2189, 2241
BplI GAGNNNNNCTC 4 cut(s) 1757, 1789, 2631, 2663
BpmI CTGGAG 3 cut(s) 899, 3105, 3916
Bpu1102I GCTNAGC 2 cut(s) 1647, 3221
Bpu14I TTCGAA 1 cut(s) 2612
BpuEI CTTGAG 2 cut(s) 3714, 3836
BpuMI CCSGG 1 cut(s) 1740
Bsa29I ATCGAT 2 cut(s) 485, 3983
BsaAI YACGTR 1 cut(s) 2566
BsaBI GATNNNNATC 1 cut(s) 2094
BsaI GGTCTC 4 cut(s) 848, 917, 1567, 4203
BsaJI CCNNGG 5 cut(s) 1447, 1557, 1701, 1923, 3538
BsaWI WCCGGW 2 cut(s) 1775, 2221
BsaXI ACNNNNNCTCC 6 cut(s) 857, 887, 976, 1006, 1734, 1764
Bsc4I CCNNNNNNNGG 5 cut(s) 335, 650, 1713, 3476, 3650
Bse1I ACTGG 5 cut(s) 1639, 2494, 2583, 3598, 3899
Bse3DI GCAATG 4 cut(s) 69, 117, 598, 890
Bse8I GATNNNNATC 1 cut(s) 2094
BseBI CCWGG 4 cut(s) 552, 917, 996, 1448
BseCI ATCGAT 2 cut(s) 485, 3983
BseDI CCNNGG 5 cut(s) 1447, 1557, 1701, 1923, 3538
BseGI GGATG 7 cut(s) 344, 1030, 2110, 2732, 3306, 3723, 3973
BseJI GATNNNNATC 1 cut(s) 2094
BseLI CCNNNNNNNGG 5 cut(s) 335, 650, 1713, 3476, 3650
BseMI GCAATG 4 cut(s) 69, 117, 598, 890
BseMII CTCAG 5 cut(s) 33, 1638, 2021, 2412, 3252
BseNI ACTGG 5 cut(s) 1639, 2494, 2583, 3598, 3899
BsePI GCGCGC 1 cut(s) 3931
BseRI GAGGAG 3 cut(s) 2536, 3128, 3961
BseSI GKGCMC 1 cut(s) 2074
BseYI CCCAGC 3 cut(s) 379, 649, 3419
BsgI GTGCAG 4 cut(s) 675, 2139, 3036, 4072
Bsh1236I CGCG 3 cut(s) 1573, 2068, 3933
Bsh1285I CGRYCG 1 cut(s) 297
BshNI GGYRCC 1 cut(s) 1938
BshVI ATCGAT 2 cut(s) 485, 3983
BsiEI CGRYCG 1 cut(s) 297
BsiHKAI GWGCWC 4 cut(s) 1155, 2173, 2649, 2782
BsiSI CCGG 4 cut(s) 1739, 1776, 2222, 3589
BslFI GGGAC 3 cut(s) 1700, 2905, 3918
BslI CCNNNNNNNGG 5 cut(s) 335, 650, 1713, 3476, 3650
BsmAI GTCTC 8 cut(s) 848, 917, 1097, 1292, 1567, 1940, 2478, 4203
BsmBI CGTCTC 1 cut(s) 1940
BsmFI GGGAC 3 cut(s) 1700, 2905, 3918
BsmI GAATGC 4 cut(s) 62, 1651, 2055, 2908
Bso31I GGTCTC 4 cut(s) 848, 917, 1567, 4203
Bsp119I TTCGAA 1 cut(s) 2612
Bsp1286I GDGCHC 5 cut(s) 1155, 2074, 2173, 2649, 2782
Bsp1407I TGTACA 1 cut(s) 3683
Bsp1720I GCTNAGC 2 cut(s) 1647, 3221
Bsp19I CCATGG 1 cut(s) 1923
BspACI CCGC 5 cut(s) 5, 113, 759, 3456, 4028
BspCNI CTCAG 5 cut(s) 34, 1639, 2020, 2413, 3251
BspDI ATCGAT 2 cut(s) 485, 3983
BspFNI CGCG 3 cut(s) 1573, 2068, 3933
BspHI TCATGA 2 cut(s) 691, 3697
BspLI GGNNCC 7 cut(s) 1512, 1774, 1918, 1940, 2347, 3774, 3950
BspMAI CTGCAG 2 cut(s) 940, 4014
BspMI ACCTGC 1 cut(s) 662
BspOI GCTAGC 1 cut(s) 3371
BspQI GCTCTTC 1 cut(s) 2654
BspT104I TTCGAA 1 cut(s) 2612
BspT107I GGYRCC 1 cut(s) 1938
BspTI CTTAAG 1 cut(s) 2708
BspTNI GGTCTC 4 cut(s) 848, 917, 1567, 4203
BsrDI GCAATG 4 cut(s) 69, 117, 598, 890
BsrGI TGTACA 1 cut(s) 3683
BsrI ACTGG 5 cut(s) 1639, 2494, 2583, 3598, 3899
BssECI CCNNGG 5 cut(s) 1447, 1557, 1701, 1923, 3538
BssHII GCGCGC 1 cut(s) 3931
BssNAI GTATAC 1 cut(s) 1895
BssSI CACGAG 1 cut(s) 2948
BssT1I CCWWGG 3 cut(s) 1557, 1701, 1923
Bst1107I GTATAC 1 cut(s) 1895
Bst2BI CACGAG 1 cut(s) 2948
Bst2UI CCWGG 4 cut(s) 552, 917, 996, 1448
Bst4CI ACNGT 8 cut(s) 1150, 1365, 2188, 2430, 4048, 4057, 4078, 4170
Bst6I CTCTTC 4 cut(s) 2463, 2654, 3849, 3938
BstAFI CTTAAG 1 cut(s) 2708
BstAPI GCANNNNNTGC 1 cut(s) 2126
BstAUI TGTACA 1 cut(s) 3683
BstBAI YACGTR 1 cut(s) 2566
BstBI TTCGAA 1 cut(s) 2612
BstC8I GCNNGC 9 cut(s) 1170, 1174, 2070, 2140, 3061, 3365, 3369, 3933, 4101
BstDSI CCRYGG 2 cut(s) 1923, 3538
BstF5I GGATG 7 cut(s) 344, 1030, 2110, 2732, 3306, 3723, 3973
BstFNI CGCG 3 cut(s) 1573, 2068, 3933
BstH2I RGCGCY 1 cut(s) 3228
BstHHI GCGC 6 cut(s) 1575, 2055, 2068, 3227, 3933, 3935
BstMAI GTCTC 8 cut(s) 848, 917, 1097, 1292, 1567, 1940, 2478, 4203
BstMCI CGRYCG 1 cut(s) 297
BstMWI GCNNNNNNNGC 9 cut(s) 119, 836, 1136, 1519, 1703, 2126, 2135, 3930, 4144
BstNI CCWGG 4 cut(s) 552, 917, 996, 1448
BstNSI RCATGY 2 cut(s) 3367, 3412
BstSCI CCNGG 5 cut(s) 550, 915, 994, 1446, 1738
BstSFI CTRYAG 4 cut(s) 166, 936, 3387, 4010
BstSLI GKGCMC 1 cut(s) 2074
BstUI CGCG 3 cut(s) 1573, 2068, 3933
BstV2I GAAGAC 2 cut(s) 2189, 2241
BstX2I RGATCY 7 cut(s) 1275, 1916, 1975, 1983, 1999, 2741, 3733
BstXI CCANNNNNNTGG 1 cut(s) 3139
BstYI RGATCY 7 cut(s) 1275, 1916, 1975, 1983, 1999, 2741, 3733
BstZ17I GTATAC 1 cut(s) 1895
Bsu15I ATCGAT 2 cut(s) 485, 3983
BsuI GTATCC 2 cut(s) 2811, 4062
BsuTUI ATCGAT 2 cut(s) 485, 3983
BtgI CCRYGG 2 cut(s) 1923, 3538
BtrI CACGTC 1 cut(s) 1437
BtsCI GGATG 7 cut(s) 344, 1030, 2110, 2732, 3306, 3723, 3973
BtsI GCAGTG 2 cut(s) 1461, 2337
BveI ACCTGC 1 cut(s) 662
Cac8I GCNNGC 9 cut(s) 1170, 1174, 2070, 2140, 3061, 3365, 3369, 3933, 4101
CciI TCATGA 2 cut(s) 691, 3697
CfoI GCGC 6 cut(s) 1575, 2055, 2068, 3227, 3933, 3935
Cfr13I GGNCC 6 cut(s) 18, 761, 1071, 2273, 3772, 4060
ClaI ATCGAT 2 cut(s) 485, 3983
CseI GACGC 2 cut(s) 183, 1957
Csp6I GTAC 4 cut(s) 1361, 1939, 2591, 3684
CspCI CAANNNNNGTGG 2 cut(s) 2017, 2052
CviQI GTAC 4 cut(s) 1361, 1939, 2591, 3684
DraI TTTAAA 1 cut(s) 2871
DrdI GACNNNNNNGTC 1 cut(s) 909
DriI GACNNNNNGTC 2 cut(s) 759, 840
DseDI GACNNNNNNGTC 1 cut(s) 909
EaeI YGGCCR 3 cut(s) 2041, 2942, 3586
Eam1104I CTCTTC 4 cut(s) 2463, 2654, 3849, 3938
Eam1105I GACNNNNNGTC 2 cut(s) 759, 840
EarI CTCTTC 4 cut(s) 2463, 2654, 3849, 3938
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 2171, 2647
Eco130I CCWWGG 3 cut(s) 1557, 1701, 1923
Eco24I GRGCYC 2 cut(s) 2173, 2649
Eco31I GGTCTC 4 cut(s) 848, 917, 1567, 4203
Eco32I GATATC 3 cut(s) 130, 667, 933
Eco47I GGWCC 5 cut(s) 18, 761, 1071, 2273, 3772
Eco53kI GAGCTC 2 cut(s) 2171, 2647
Eco57I CTGAAG 7 cut(s) 419, 877, 1067, 1262, 2235, 2427, 2603
Eco72I CACGTG 1 cut(s) 2566
EcoICRI GAGCTC 2 cut(s) 2171, 2647
EcoO109I RGGNCCY 1 cut(s) 2273
EcoRI GAATTC 1 cut(s) 3143
EcoRII CCWGG 4 cut(s) 550, 915, 994, 1446
EcoRV GATATC 3 cut(s) 130, 667, 933
EcoT14I CCWWGG 3 cut(s) 1557, 1701, 1923
EcoT38I GRGCYC 2 cut(s) 2173, 2649
ErhI CCWWGG 3 cut(s) 1557, 1701, 1923
Esp3I CGTCTC 1 cut(s) 1940
FalI AAGNNNNNCTT 8 cut(s) 486, 518, 1740, 1772, 1803, 1835, 1935, 1967
FaqI GGGAC 3 cut(s) 1700, 2905, 3918
FauI CCCGC 1 cut(s) 3463
FauNDI CATATG 2 cut(s) 1858, 3313
FbaI TGATCA 1 cut(s) 2667
FblI GTMKAC 2 cut(s) 1894, 4038
FokI GGATG 7 cut(s) 351, 1037, 2117, 2739, 3313, 3710, 3980
FriOI GRGCYC 2 cut(s) 2173, 2649
GlaI GCGC 6 cut(s) 1574, 2054, 2067, 3226, 3932, 3934
GsaI CCCAGC 3 cut(s) 383, 653, 3423
GsuI CTGGAG 3 cut(s) 899, 3105, 3916
HaeII RGCGCY 1 cut(s) 3228
HapII CCGG 4 cut(s) 1739, 1776, 2222, 3589
HgaI GACGC 2 cut(s) 183, 1957
HhaI GCGC 6 cut(s) 1575, 2055, 2068, 3227, 3933, 3935
Hin6I GCGC 6 cut(s) 1573, 2053, 2066, 3225, 3931, 3933
HinP1I GCGC 6 cut(s) 1573, 2053, 2066, 3225, 3931, 3933
HincII GTYRAC 2 cut(s) 625, 2212
HindII GTYRAC 2 cut(s) 625, 2212
HpaII CCGG 4 cut(s) 1739, 1776, 2222, 3589
HphI GGTGA 5 cut(s) 617, 686, 830, 1010, 1052
Hpy166II GTNNAC 8 cut(s) 326, 366, 625, 1074, 1111, 1895, 2212, 4039
Hpy8I GTNNAC 8 cut(s) 326, 366, 625, 1074, 1111, 1895, 2212, 4039
HpyCH4III ACNGT 8 cut(s) 1150, 1365, 2188, 2430, 4048, 4057, 4078, 4170
HpyCH4IV ACGT 5 cut(s) 537, 1436, 2565, 3208, 3712
HpyF10VI GCNNNNNNNGC 9 cut(s) 119, 836, 1136, 1519, 1703, 2126, 2135, 3930, 4144
HpySE526I ACGT 5 cut(s) 537, 1436, 2565, 3208, 3712
HspAI GCGC 6 cut(s) 1573, 2053, 2066, 3225, 3931, 3933
KpnI GGTACC 1 cut(s) 1942
Ksp22I TGATCA 1 cut(s) 2667
LguI GCTCTTC 1 cut(s) 2654
LmnI GCTCC 7 cut(s) 1510, 1778, 2168, 2732, 3086, 3897, 3948
LweI GCATC 9 cut(s) 619, 1015, 1582, 2116, 2744, 3142, 3265, 3561, 3989
MaeII ACGT 5 cut(s) 537, 1436, 2565, 3208, 3712
MaeIII GTNAC 5 cut(s) 1365, 1423, 2197, 3091, 3828
MfeI CAATTG 4 cut(s) 228, 2453, 3463, 3687
MflI RGATCY 7 cut(s) 1275, 1916, 1975, 1983, 1999, 2741, 3733
MhlI GDGCHC 5 cut(s) 1155, 2074, 2173, 2649, 2782
MlsI TGGCCA 2 cut(s) 2043, 2944
MluNI TGGCCA 2 cut(s) 2043, 2944
MmeI TCCRAC 4 cut(s) 855, 1102, 1584, 3761
Mox20I TGGCCA 2 cut(s) 2043, 2944
MroXI GAANNNNTTC 1 cut(s) 1905
MscI TGGCCA 2 cut(s) 2043, 2944
MslI CAYNNNNRTG 1 cut(s) 4094
Msp20I TGGCCA 2 cut(s) 2043, 2944
MspA1I CMGCKG 1 cut(s) 839
MspCI CTTAAG 1 cut(s) 2708
MspI CCGG 4 cut(s) 1739, 1776, 2222, 3589
MspR9I CCNGG 5 cut(s) 552, 917, 996, 1448, 1740
MunI CAATTG 4 cut(s) 228, 2453, 3463, 3687
Mva1269I GAATGC 4 cut(s) 62, 1651, 2055, 2908
MvaI CCWGG 4 cut(s) 552, 917, 996, 1448
MvnI CGCG 3 cut(s) 1573, 2068, 3933
MwoI GCNNNNNNNGC 9 cut(s) 119, 836, 1136, 1519, 1703, 2126, 2135, 3930, 4144
NciI CCSGG 1 cut(s) 1740
NcoI CCATGG 1 cut(s) 1923
NdeI CATATG 2 cut(s) 1858, 3313
NheI GCTAGC 1 cut(s) 3367
NlaIV GGNNCC 7 cut(s) 1512, 1774, 1918, 1940, 2347, 3774, 3950
NmuCI GTSAC 2 cut(s) 2197, 3091
NspI RCATGY 2 cut(s) 3367, 3412
NspV TTCGAA 1 cut(s) 2612
OliI CACNNNNGTG 1 cut(s) 4094
PaeI GCATGC 1 cut(s) 3367
PagI TCATGA 2 cut(s) 691, 3697
PaqCI CACCTGC 1 cut(s) 662
PauI GCGCGC 1 cut(s) 3931
PciSI GCTCTTC 1 cut(s) 2654
PctI GAATGC 4 cut(s) 62, 1651, 2055, 2908
PdmI GAANNNNTTC 1 cut(s) 1905
PflFI GACNNNGTC 2 cut(s) 2318, 3046
PfoI TCCNGGA 1 cut(s) 550
Ple19I CGATCG 1 cut(s) 297
PmaCI CACGTG 1 cut(s) 2566
PmlI CACGTG 1 cut(s) 2566
Ppu21I YACGTR 1 cut(s) 2566
PpuMI RGGWCCY 1 cut(s) 2273
PshBI ATTAAT 2 cut(s) 713, 2415
PsiI TTATAA 2 cut(s) 2628, 4052
Psp124BI GAGCTC 2 cut(s) 2173, 2649
Psp5II RGGWCCY 1 cut(s) 2273
Psp6I CCWGG 4 cut(s) 550, 915, 994, 1446
PspCI CACGTG 1 cut(s) 2566
PspFI CCCAGC 3 cut(s) 379, 649, 3419
PspGI CCWGG 4 cut(s) 550, 915, 994, 1446
PspN4I GGNNCC 7 cut(s) 1512, 1774, 1918, 1940, 2347, 3774, 3950
PspPI GGNCC 6 cut(s) 18, 761, 1071, 2273, 3772, 4060
PspPPI RGGWCCY 1 cut(s) 2273
PstI CTGCAG 2 cut(s) 940, 4014
PsuI RGATCY 7 cut(s) 1275, 1916, 1975, 1983, 1999, 2741, 3733
PsyI GACNNNGTC 2 cut(s) 2318, 3046
PteI GCGCGC 1 cut(s) 3931
PvuI CGATCG 1 cut(s) 297
PvuII CAGCTG 1 cut(s) 839
RsaI GTAC 4 cut(s) 1362, 1940, 2592, 3685
RsaNI GTAC 4 cut(s) 1361, 1939, 2591, 3684
RseI CAYNNNNRTG 1 cut(s) 4094
SacI GAGCTC 2 cut(s) 2173, 2649
SapI GCTCTTC 1 cut(s) 2654
Sau96I GGNCC 6 cut(s) 18, 761, 1071, 2273, 3772, 4060
ScaI AGTACT 1 cut(s) 1362
ScrFI CCNGG 5 cut(s) 552, 917, 996, 1448, 1740
SduI GDGCHC 5 cut(s) 1155, 2074, 2173, 2649, 2782
SfaNI GCATC 9 cut(s) 619, 1015, 1582, 2116, 2744, 3142, 3265, 3561, 3989
SfcI CTRYAG 4 cut(s) 166, 936, 3387, 4010
SfuI TTCGAA 1 cut(s) 2612
SinI GGWCC 5 cut(s) 18, 761, 1071, 2273, 3772
SmiMI CAYNNNNRTG 1 cut(s) 4094
SmlI CTYRAG 3 cut(s) 2708, 3729, 3815
SmoI CTYRAG 3 cut(s) 2708, 3729, 3815
SpeI ACTAGT 1 cut(s) 3958
SphI GCATGC 1 cut(s) 3367
SsiI CCGC 5 cut(s) 5, 113, 759, 3456, 4028
SspI AATATT 3 cut(s) 109, 1906, 4193
SstI GAGCTC 2 cut(s) 2173, 2649
StyD4I CCNGG 5 cut(s) 550, 915, 994, 1446, 1738
StyI CCWWGG 3 cut(s) 1557, 1701, 1923
TaaI ACNGT 8 cut(s) 1150, 1365, 2188, 2430, 4048, 4057, 4078, 4170
TaiI ACGT 5 cut(s) 540, 1439, 2568, 3211, 3715
TaqI TCGA 6 cut(s) 297, 485, 2612, 2643, 2827, 3983
TatI WGTACW 3 cut(s) 1360, 2590, 3683
TseFI GTSAC 2 cut(s) 2197, 3091
Tsp45I GTSAC 2 cut(s) 2197, 3091
Tth111I GACNNNGTC 2 cut(s) 2318, 3046
Vha464I CTTAAG 1 cut(s) 2708
VpaK11BI GGWCC 5 cut(s) 18, 761, 1071, 2273, 3772
VspI ATTAAT 2 cut(s) 713, 2415
XapI RAATTY 9 cut(s) 1043, 1303, 1677, 2259, 3143, 3157, 3373, 3520, 4031
XbaI TCTAGA 3 cut(s) 1978, 2836, 3211
XceI RCATGY 2 cut(s) 3367, 3412
XcmI CCANNNNNNNNNTGG 1 cut(s) 2726
XmiI GTMKAC 2 cut(s) 1894, 4038
XmnI GAANNNNTTC 1 cut(s) 1905
ZrmI AGTACT 1 cut(s) 1362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.