Rh7CG159800

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0002044
Physical Location & Seq
Forward (+)
13104728 .. 13112050
7323 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG159800.1

Sequence Viewer

Length: 4467 bp
ATGGGGGAGGGTTTCTGGACCTTATTCTGCACCAGTTCTGAGTGTTCAAATGGGTCTGGAAATGAATGCAGTTCTGGCATTCTAGCCATTATCAATCCAAATTCATGTATCAACAATATTGTCGTCATTGCAGTTGATATTTTGCTCCTACTCATCTTGTTATGTTTCCTTATGTATAGAATAGCATCAAAGAAGATTATAGCACCATCACAGCCTCAAACCTTCTCTCCAGTATCAGTTGTGTCAATCAGTTTCAATGCAGGTTTGGCTTTGGTCTACTTGGGGTCTGGGATATGGACAATCACTGAGAAAGTATATACATATCACATGGTTTTACCTCTACATGGATGGCTAGTATATTTTTTTCAAGGGTTTACATGGTTGGGCCTGGGTTTTACCATAAACCTCTCAAAACCACACCTTCCGCATAACGCAATAATGAAATTCTTTTCAATTTTTGGTTTCTTAATTGCAGTTTTCCTTTGTGGTTCATCAATTTGGAAATCTATTCTGGATGGGGCCTTATCAGTTCTGATTGTTTTAAACATTCTTTGTTTCCCTGGATCAATTCTCTTGCTCTTTAGTGCATTTGAAGGAACAAATAATGCAAAAGGTGATCCAGAAGTCCATAATGGTCATGCTTTCTACACACCTTTGCCAGGTGCAGAACCAGATATCACAGGTGATATCAGTCCAAATGACACTGTAACTCCTTTTGCAAAAGCTGGATTGTTTAGTAAAATGTCATTTTGGTGGTTGAATCCATTAATGAAGAAAGGTAAGGAAAAGATCCTTGAGAATGAAGATATTCCACAATTGCGAGAAGCTGATCGAGCACGAACATTGCACTCAATATTCAGGGAGCAATTGCATAAAAGAAAGGAAAGACATCCGTCTAGTGACCCTTCTATTCTGACCATAATTTTTTTCTGCCAGTGGAAAGCAATTTTGGTTTCAGGGTTCTTTGCACTCCTCAAGATTCTCGCAATGACTGCCTCCCCACTGTTTCTCATAGCTTTCATCAAGGTTGTTGATGGCGATGCAGCTTTTAAATATGAGGTTTATGCACTGACTGCTGGTCTGTTCGTTGTGAAAATCGTGGAGTCACTGTCAGAGAGGCAATGGTTCTTTAGAACTAGACTTATTGGACTCCAGGTAAGATCATTGATATCTGCAGCAGTTTATCAGAAGCAACTAAGACTCTCAAATGCTGTCAAGACGACTCATTCTCCTGGTGAGATAGTGAACTATGTAACAGTGGATGCTTACAGAATCGGTGAATTTCCTTACTGGTTTCATCAGATATGGTCCACAAACCTTCAATTGTGTCTCTCATTACTTATTATTTACTTCGCTGTTGGGGCAGCAACTCTTGCAGCTCTAACTGTTCTCATATTGACTATGGTGGTAAGCTCTCCATTGGCGAAGTTGCAGCATGAGTACCAAACAAAGTTCATGATTGCACAAAACAAGAGGTTGAGGGCCATTACAGAAGCACTATCAAATATGAAAATCTTGAAGCTGTATTCTTGGGAGACAAATTTCAAGAAAGTCATAGAAGGTTTTAGAGCAGAAGAACTCAAATGGATAGCTAAAGTACTGTCACAAAAGGGATATTGTAATGCTTTATTCTGGACAGCTCCTGTTTTGGCAGCAGCTGTCACCTTTTGGACATGTTACTTCCTGGGATTTACACTCACAGCTAGTAATGTTTTCACGTTTCTAGCAACTTTGCGTATACTTCAGGAGCCAATTAGGCTAATCCCAGACGTCTTTGGAGCATTTATTGAAGCAAAGGTTTCATTTTCTCGGATTGTGAAGTTCCTTGATGCCCCAGAGTTGGAGAACAGACATACAAGGAAACAGAGCTGTGGCAAGGAGGTTGAGCATTCAATTTTCATTAGAGCCTCTGAAATTTCATGGGATATAGAAGCTACAAGGGCCACATTGAGGGACATTAATTTAGTGGTTAAGCAAGGAGAAAAAGTAGCTATTTGTGGAGAGGTTGGCTCAGGAAAATCAACCCTTTTAGCTGCAATTCTTGGAGAGGTTCCACGCATCAATGGCATTGTTCAAGTATATGGCACGATAGCATATGTCTCTCAGTCTGCATGGATCCAAACAGGAACTATACAAGATAATATTCTGTTTGGGACTCCCATGGATCATGTTAGATACCAAGAAACTCTTGAGAAGTGTTCTCTCATAAAGGACCTCAATATTCTTCCATTCGGCGATCTCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGTGGCCAGAAACAGCGCATTCAACTTGCACGTGCATTGTATCAAAATGCTGAAGTCTACTTATTGGATGATCCCTTCAGTGCTGTTGATGCTCATACTGCCATAAGCCTGTTCAATGAATATGTCATGGGAGCTCTGGCAGAGAAGACAGTGTTGCTTGTTACACACCAAGTCGACTTCCTTCCAGCTTTTAATTCAATATTGTTGATGTCTTGGGGAAAAATTTCAAGAGCAGCTCCTTTCGACGAGTTACTGGCTTCTTGTCAAGAGTTCCAAGACCTTGTCAATGCACATAATGACACTGCTGGTTCCGGGAGGCAAGTTGAATATGCTTCTACTAGGAAACAGAAATTGGCTGCAGAGGAGATTGAGAAAGAAAGAACTGAGGTAGAGCTAAAAGAATCTTCAGGAGATCAATTGATTAAGAAAGAAGAGAGAGAAACAGGAGACACAGGGTTCAAGCCATACATTCAGTATTTGAAGCATAGCAGGGGCTTTTTGCATTTCTCCTTATCAGTTCTTTTCTTGTTTCTGTTCATTGTTGGGCAATTAATTCAGAATTATTGGTTGGCTTTGAATCTTCAGGATTATAGCGTGTCCAGAGTCAAACTCTTCACAGTTTATTCTGTGATCTTCTGTATAATGTCATTCTTTTTGCTTCTTCGATCTTTTATGATAGTTGATTTAGGATGTGGAGCTTCAGAATCTATTTTCTCTGCACTACTGAACTCTCTTTTCCGAGCACCAATGCTGTTTTATGATTCAACACCTGTGGGGAGGATACTTAGTCGGGTATCTACTGATATGAATATCATCGACCTTGAAGTAGGTTTAAAGTTGGCATTTGCTGCTGGGGCGATTGTTAGCGCCTACAGCATATTTTTGGTATTGGTTGTTCTTGCTTGGCCACTCGTGTTTCTGATTGCACCTACAATTTATCTTACTTATCTGTTTCAGAATTACTACTTTGCTTCTGCAAAAGAGTTAATGCGAATGAATGGCACGACTAAGTCTGCGATTGCAAGCCAACTTTCTGAATCTATTGCTGGAGCAATGACAATCAGAGCTTTTGGAGAGGAGAAACGATTCTATTCAAAAAACTTGGAATTTATTGATGCAAATTCTAGTGCTGACTTCAATAGTTTCTCAACAAATGAGTGGTTAACCGAACGTCTGGAATTTCTGTGTGCTATTGTTCTCTCAGCCTCAGCCATTGCCATTACTTGGATAGATGCTTCTTCCTCTGGATTTGTTGGGATGACACTATCATATGGTCTCTCATTAAATGTATTCCTCGTAACTTCTGTCCAACTTCAGTGCATGATAGGAAATTCAATTGTTTCTGTTGAAAGGGTAGAACAATACATGCATATTACCAGTGAATCTGCACAAATAATAGAAGAAAACCGACCTGCACACAATTGGCCTGTTGTTGGTAAAGTGGAAATATGTGACTTAAAGGTCAGATATAGGCCAAATTCTCCTTTGGTTCTTCGTGGGATAAATTGCATAATTGAAGGAGGGTACAAAGTTGGAATCGTTGGCCGGACTGGAAGTGGAAAGACAACTCTTATCAGCGTTTTGTTTCGTCTGGTAGAGCCTACAGAGGGAAAAGTCATTATAGACGATTATGACATTTGTACCATTGGTCTTCATGATTTAAGATCACGTTTGGGGATCATCCCACAAGAGCCAACCTTATTCGGTGGCTCTGTGAGATTCAACCTTGACCCCTTATCAGAGCATACTGATCTTCAAATATGGGAGGTTCTTGAGAAATGCCAGTTACGAAAGGCCATTGAAGAGAAAGAAGAGGGTCTGGACACCTTTGTTGTGCAAGATGGAACAAACTGGAGCACGGGGCAGCGTCAACTATTCTGTTTGGGACGTGCTTTACTGAAGAGGAGCCGAATACTAGTGCTGGATGAAGCCACTGCATCAATGGACAATGCAACAGACTCTATTCTCCAGAAAACTATAAGAAAGGAATTTGCAGACTGCACTGTAATAACAGTGGCCCATAGGATACCAACCGTGATGGACTGCACTAAAGTTCTTGCCATAAGTGATGGGCTATTAGTAGAGTATGATGAGCCAGCGAAGCTGATGAACAATGAGGGGTCACTGTTTGGGCAGCTTGTGAAGGAATACTGGTCGCGTTCTGCCAATGCTGGCATCCATTCAGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1488

Amino Acids

166.19

Weight (kDa)

6.41

Isoelectric Point (pI)

35.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 3 - 201 5.7e-69 ABCC10 N-terminal domain
ABC_membrane PF00664 317 - 584 7e-27 ABC transporter transmembrane region
ABC_tran PF00005 650 - 784 1.7e-21 ABC transporter
ABC_membrane PF00664 929 - 1181 1.6e-26 ABC transporter transmembrane region
ABC_tran PF00005 1256 - 1404 8.1e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 3734
AatII GACGTC 1 cut(s) 1773
Acc36I ACCTGC 2 cut(s) 251, 3694
AccB7I CCANNNNNTGG 1 cut(s) 3498
AccI GTMKAC 4 cut(s) 276, 1738, 2331, 2448
AccII CGCG 1 cut(s) 4432
AciI CCGC 1 cut(s) 425
AclWI GGATC 8 cut(s) 571, 611, 784, 2110, 2123, 2172, 2339, 3959
AcoI YGGCCR 3 cut(s) 2278, 3179, 3817
AcuI CTGAAG 8 cut(s) 1727, 2335, 2346, 2664, 2840, 2958, 3572, 4193
AcvI CACGTG 1 cut(s) 2306
AcyI GRCGYC 1 cut(s) 1770
AfaI GTAC 4 cut(s) 1442, 1599, 3800, 3916
AfiI CCNNNNNNNGG 7 cut(s) 344, 659, 1840, 1950, 3498, 3707, 3881
AflIII ACRYGT 1 cut(s) 1673
AhdI GACNNNNNGTC 1 cut(s) 1077
AhlI ACTAGT 1 cut(s) 4189
AjiI CACGTC 1 cut(s) 4163
AjnI CCWGG 6 cut(s) 387, 559, 658, 1152, 1231, 1683
AjuI GAANNNNNNNTTGG 6 cut(s) 932, 964, 2609, 2641, 2825, 2857
Alw21I GWGCWC 4 cut(s) 838, 2410, 3019, 4133
Alw26I GTCTC 5 cut(s) 1334, 1529, 2104, 2715, 3554
AlwI GGATC 8 cut(s) 571, 611, 784, 2110, 2123, 2172, 2339, 3959
AlwNI CAGNNNCTG 2 cut(s) 1643, 1658
AseI ATTAAT 3 cut(s) 767, 1959, 2825
Asp700I GAANNNNTTC 3 cut(s) 807, 2497, 3359
AspLEI GCGC 2 cut(s) 2292, 3143
AspS9I GGNCC 8 cut(s) 18, 385, 519, 1308, 1482, 1941, 2212, 4291
AsuC2I CCSGG 1 cut(s) 2587
AsuHPI GGTGA 5 cut(s) 626, 695, 1247, 1289, 1654
AvaII GGWCC 3 cut(s) 18, 1308, 2212
BaeI ACNNNNGTAYC 2 cut(s) 3898, 3931
BalI TGGCCA 2 cut(s) 2280, 3181
BamHI GGATCC 1 cut(s) 2115
BanII GRGCYC 1 cut(s) 2410
BauI CACGAG 1 cut(s) 3185
BbrPI CACGTG 1 cut(s) 2306
BbsI GAAGAC 2 cut(s) 2426, 3917
Bbv12I GWGCWC 4 cut(s) 838, 2410, 3019, 4133
BbvCI CCTCAGC 1 cut(s) 3481
BccI CCATC 7 cut(s) 214, 342, 509, 1028, 4109, 4306, 4337
BciT130I CCWGG 6 cut(s) 389, 561, 660, 1154, 1233, 1685
BciVI GTATCC 2 cut(s) 3048, 4293
BcnI CCSGG 1 cut(s) 2587
BcoDI GTCTC 5 cut(s) 1334, 1529, 2104, 2715, 3554
BcuI ACTAGT 1 cut(s) 4189
BfaI CTAG 9 cut(s) 83, 353, 897, 1137, 1704, 1724, 2613, 3399, 4190
BfmI CTRYAG 4 cut(s) 1173, 2631, 3145, 3876
BfoI RGCGCY 1 cut(s) 3144
BfuAI ACCTGC 2 cut(s) 251, 3694
BfuI GTATCC 2 cut(s) 3048, 4293
BglI GCCNNNNNGGC 1 cut(s) 1756
BmcAI AGTACT 1 cut(s) 1599
Bme1390I CCNGG 7 cut(s) 389, 561, 660, 1154, 1233, 1685, 2587
Bme18I GGWCC 3 cut(s) 18, 1308, 2212
BmeRI GACNNNNNGTC 1 cut(s) 1077
BmgBI CACGTC 1 cut(s) 4163
BmgT120I GGNCC 8 cut(s) 18, 385, 519, 1308, 1482, 1941, 2212, 4291
BmiI GGNNCC 6 cut(s) 520, 1749, 2052, 2117, 2584, 4181
BmrFI CCNGG 7 cut(s) 389, 561, 660, 1154, 1233, 1685, 2587
BoxI GACNNNNGTC 1 cut(s) 892
BpiI GAAGAC 2 cut(s) 2426, 3917
BplI GAGNNNNNCTC 4 cut(s) 1994, 2026, 2868, 2900
BpmI CTGGAG 5 cut(s) 213, 1136, 3342, 4147, 4226
Bpu10I CCTNAGC 2 cut(s) 2011, 3481
BpuEI CTTGAG 4 cut(s) 815, 959, 2210, 4067
BpuMI CCSGG 1 cut(s) 2587
BsaAI YACGTR 1 cut(s) 2306
BsaHI GRCGYC 1 cut(s) 1770
BsaI GGTCTC 1 cut(s) 3554
BsaJI CCNNGG 4 cut(s) 388, 559, 1684, 2160
Bsc4I CCNNNNNNNGG 7 cut(s) 344, 659, 1840, 1950, 3498, 3707, 3881
Bse3DI GCAATG 6 cut(s) 126, 842, 993, 1127, 3333, 3486
BseBI CCWGG 6 cut(s) 389, 561, 660, 1154, 1233, 1685
BseDI CCNNGG 4 cut(s) 388, 559, 1684, 2160
BseLI CCNNNNNNNGG 7 cut(s) 344, 659, 1840, 1950, 3498, 3707, 3881
BseMI GCAATG 6 cut(s) 126, 842, 993, 1127, 3333, 3486
BseMII CTCAG 8 cut(s) 30, 297, 2025, 2117, 2258, 2649, 3489, 3495
BseRI GAGGAG 4 cut(s) 962, 2651, 3365, 4192
BseYI CCCAGC 1 cut(s) 3125
BsgI GTGCAG 7 cut(s) 13, 684, 2976, 3645, 3672, 4258, 4303
Bsh1236I CGCG 1 cut(s) 4432
BsiHKAI GWGCWC 4 cut(s) 838, 2410, 3019, 4133
BsiSI CCGG 2 cut(s) 2586, 3820
BslFI GGGAC 3 cut(s) 1967, 2167, 4173
BslI CCNNNNNNNGG 7 cut(s) 344, 659, 1840, 1950, 3498, 3707, 3881
BsmAI GTCTC 5 cut(s) 1334, 1529, 2104, 2715, 3554
BsmFI GGGAC 3 cut(s) 1967, 2167, 4173
BsmI GAATGC 4 cut(s) 71, 78, 1888, 2292
Bso31I GGTCTC 1 cut(s) 3554
Bsp1286I GDGCHC 4 cut(s) 838, 2410, 3019, 4133
Bsp19I CCATGG 1 cut(s) 2160
BspACI CCGC 1 cut(s) 425
BspCNI CTCAG 8 cut(s) 31, 298, 2024, 2116, 2257, 2650, 3488, 3494
BspFNI CGCG 1 cut(s) 4432
BspHI TCATGA 2 cut(s) 1455, 3928
BspLI GGNNCC 6 cut(s) 520, 1749, 2052, 2117, 2584, 4181
BspMAI CTGCAG 2 cut(s) 1177, 2635
BspMI ACCTGC 2 cut(s) 251, 3694
BspPI GGATC 8 cut(s) 571, 611, 784, 2110, 2123, 2172, 2339, 3959
BspTNI GGTCTC 1 cut(s) 3554
BsrDI GCAATG 6 cut(s) 126, 842, 993, 1127, 3333, 3486
BssECI CCNNGG 4 cut(s) 388, 559, 1684, 2160
BssNAI GTATAC 1 cut(s) 1739
BssNI GRCGYC 1 cut(s) 1770
BssSI CACGAG 1 cut(s) 3185
BssT1I CCWWGG 1 cut(s) 2160
Bst1107I GTATAC 1 cut(s) 1739
Bst2BI CACGAG 1 cut(s) 3185
Bst2UI CCWGG 6 cut(s) 389, 561, 660, 1154, 1233, 1685
Bst6I CTCTTC 5 cut(s) 2700, 2891, 4071, 4080, 4169
BstACI GRCGYC 1 cut(s) 1770
BstAPI GCANNNNNTGC 4 cut(s) 992, 1073, 1373, 3122
BstBAI YACGTR 1 cut(s) 2306
BstC8I GCNNGC 3 cut(s) 3298, 4371, 4447
BstDSI CCRYGG 1 cut(s) 2160
BstENI CCTNNNNNAGG 1 cut(s) 657
BstFNI CGCG 1 cut(s) 4432
BstH2I RGCGCY 1 cut(s) 3144
BstHHI GCGC 2 cut(s) 2292, 3143
BstMAI GTCTC 5 cut(s) 1334, 1529, 2104, 2715, 3554
BstNI CCWGG 6 cut(s) 389, 561, 660, 1154, 1233, 1685
BstNSI RCATGY 2 cut(s) 1677, 3643
BstPAI GACNNNNGTC 1 cut(s) 892
BstSCI CCNGG 7 cut(s) 387, 559, 658, 1152, 1231, 1683, 2585
BstSFI CTRYAG 4 cut(s) 1173, 2631, 3145, 3876
BstUI CGCG 1 cut(s) 4432
BstV2I GAAGAC 2 cut(s) 2426, 3917
BstX2I RGATCY 2 cut(s) 789, 2115
BstYI RGATCY 2 cut(s) 789, 2115
BstZ17I GTATAC 1 cut(s) 1739
BsuI GTATCC 2 cut(s) 3048, 4293
BtgI CCRYGG 1 cut(s) 2160
BtgZI GCGATG 1 cut(s) 1053
BtrI CACGTC 1 cut(s) 4163
BtsI GCAGTG 2 cut(s) 2574, 4206
BveI ACCTGC 2 cut(s) 251, 3694
Cac8I GCNNGC 3 cut(s) 3298, 4371, 4447
CaiI CAGNNNCTG 2 cut(s) 1643, 1658
CciI TCATGA 2 cut(s) 1455, 3928
CfoI GCGC 2 cut(s) 2292, 3143
Cfr13I GGNCC 8 cut(s) 18, 385, 519, 1308, 1482, 1941, 2212, 4291
CseI GACGC 1 cut(s) 4130
Csp6I GTAC 4 cut(s) 1441, 1598, 3799, 3915
CspCI CAANNNNNGTGG 4 cut(s) 2254, 2289, 3027, 3062
CviQI GTAC 4 cut(s) 1441, 1598, 3799, 3915
DraI TTTAAA 3 cut(s) 543, 1051, 3108
DrdI GACNNNNNNGTC 1 cut(s) 3734
DriI GACNNNNNGTC 1 cut(s) 1077
DseDI GACNNNNNNGTC 1 cut(s) 3734
EaeI YGGCCR 3 cut(s) 2278, 3179, 3817
Eam1104I CTCTTC 5 cut(s) 2700, 2891, 4071, 4080, 4169
Eam1105I GACNNNNNGTC 1 cut(s) 1077
EarI CTCTTC 5 cut(s) 2700, 2891, 4071, 4080, 4169
Ecl136II GAGCTC 1 cut(s) 2408
Eco130I CCWWGG 1 cut(s) 2160
Eco24I GRGCYC 1 cut(s) 2410
Eco31I GGTCTC 1 cut(s) 3554
Eco32I GATATC 3 cut(s) 676, 688, 1170
Eco47I GGWCC 3 cut(s) 18, 1308, 2212
Eco53kI GAGCTC 1 cut(s) 2408
Eco57I CTGAAG 8 cut(s) 1727, 2335, 2346, 2664, 2840, 2958, 3572, 4193
Eco72I CACGTG 1 cut(s) 2306
EcoICRI GAGCTC 1 cut(s) 2408
EcoNI CCTNNNNNAGG 1 cut(s) 657
EcoO109I RGGNCCY 2 cut(s) 519, 2212
EcoRII CCWGG 6 cut(s) 387, 559, 658, 1152, 1231, 1683
EcoRV GATATC 3 cut(s) 676, 688, 1170
EcoT14I CCWWGG 1 cut(s) 2160
EcoT22I ATGCAT 1 cut(s) 3645
EcoT38I GRGCYC 1 cut(s) 2410
ErhI CCWWGG 1 cut(s) 2160
FalI AAGNNNNNCTT 2 cut(s) 2172, 2204
FaqI GGGAC 3 cut(s) 1967, 2167, 4173
FauNDI CATATG 2 cut(s) 2095, 3544
FblI GTMKAC 4 cut(s) 276, 1738, 2331, 2448
FriOI GRGCYC 1 cut(s) 2410
FspBI CTAG 9 cut(s) 83, 353, 897, 1137, 1704, 1724, 2613, 3399, 4190
GlaI GCGC 2 cut(s) 2291, 3142
GsaI CCCAGC 1 cut(s) 3129
GsuI CTGGAG 5 cut(s) 213, 1136, 3342, 4147, 4226
HaeII RGCGCY 1 cut(s) 3144
HapII CCGG 2 cut(s) 2586, 3820
HgaI GACGC 1 cut(s) 4130
HhaI GCGC 2 cut(s) 2292, 3143
Hin1I GRCGYC 1 cut(s) 1770
Hin6I GCGC 2 cut(s) 2290, 3141
HinP1I GCGC 2 cut(s) 2290, 3141
HincII GTYRAC 3 cut(s) 2449, 3438, 4145
HindII GTYRAC 3 cut(s) 2449, 3438, 4145
HpaI GTTAAC 1 cut(s) 3438
HpaII CCGG 2 cut(s) 2586, 3820
HphI GGTGA 5 cut(s) 626, 695, 1247, 1289, 1654
Hpy166II GTNNAC 9 cut(s) 277, 375, 1246, 1311, 1739, 2332, 2449, 3438, 4145
Hpy8I GTNNAC 9 cut(s) 277, 375, 1246, 1311, 1739, 2332, 2449, 3438, 4145
Hpy99I CGWCG 1 cut(s) 2522
HpyCH4IV ACGT 6 cut(s) 1718, 1770, 2305, 3445, 3943, 4162
HpySE526I ACGT 6 cut(s) 1718, 1770, 2305, 3445, 3943, 4162
Hsp92I GRCGYC 1 cut(s) 1770
HspAI GCGC 2 cut(s) 2290, 3141
KspAI GTTAAC 1 cut(s) 3438
MaeI CTAG 9 cut(s) 83, 353, 897, 1137, 1704, 1724, 2613, 3399, 4190
MaeII ACGT 6 cut(s) 1718, 1770, 2305, 3445, 3943, 4162
MfeI CAATTG 6 cut(s) 815, 866, 1322, 2690, 3609, 3694
MflI RGATCY 2 cut(s) 789, 2115
MhlI GDGCHC 4 cut(s) 838, 2410, 3019, 4133
MlsI TGGCCA 2 cut(s) 2280, 3181
MluNI TGGCCA 2 cut(s) 2280, 3181
MlyI GAGTC 7 cut(s) 1112, 1143, 1194, 1216, 2149, 2886, 4226
MmeI TCCRAC 3 cut(s) 1821, 3607, 3787
Mox20I TGGCCA 2 cut(s) 2280, 3181
Mph1103I ATGCAT 1 cut(s) 3645
MroXI GAANNNNTTC 3 cut(s) 807, 2497, 3359
MscI TGGCCA 2 cut(s) 2280, 3181
MslI CAYNNNNRTG 1 cut(s) 751
Msp20I TGGCCA 2 cut(s) 2280, 3181
MspA1I CMGCKG 1 cut(s) 1658
MspI CCGG 2 cut(s) 2586, 3820
MspR9I CCNGG 7 cut(s) 389, 561, 660, 1154, 1233, 1685, 2587
MunI CAATTG 6 cut(s) 815, 866, 1322, 2690, 3609, 3694
Mva1269I GAATGC 4 cut(s) 71, 78, 1888, 2292
MvaI CCWGG 6 cut(s) 389, 561, 660, 1154, 1233, 1685
MvnI CGCG 1 cut(s) 4432
NciI CCSGG 1 cut(s) 2587
NcoI CCATGG 1 cut(s) 2160
NdeI CATATG 2 cut(s) 2095, 3544
NlaIV GGNNCC 6 cut(s) 520, 1749, 2052, 2117, 2584, 4181
NmuCI GTSAC 6 cut(s) 899, 1104, 1602, 1660, 3725, 4395
NsiI ATGCAT 1 cut(s) 3645
NspI RCATGY 2 cut(s) 1677, 3643
PagI TCATGA 2 cut(s) 1455, 3928
PciI ACATGT 1 cut(s) 1673
PctI GAATGC 4 cut(s) 71, 78, 1888, 2292
PdmI GAANNNNTTC 3 cut(s) 807, 2497, 3359
PflFI GACNNNGTC 2 cut(s) 2555, 3283
PflMI CCANNNNNTGG 1 cut(s) 3498
PfoI TCCNGGA 1 cut(s) 2585
PleI GAGTC 7 cut(s) 1111, 1143, 1194, 1216, 2149, 2885, 4226
PmaCI CACGTG 1 cut(s) 2306
PmlI CACGTG 1 cut(s) 2306
PpsI GAGTC 7 cut(s) 1111, 1143, 1194, 1216, 2149, 2885, 4226
Ppu21I YACGTR 1 cut(s) 2306
PpuMI RGGWCCY 1 cut(s) 2212
PscI ACATGT 1 cut(s) 1673
PshAI GACNNNNGTC 1 cut(s) 892
PshBI ATTAAT 3 cut(s) 767, 1959, 2825
Psp124BI GAGCTC 1 cut(s) 2410
Psp5II RGGWCCY 1 cut(s) 2212
Psp6I CCWGG 6 cut(s) 387, 559, 658, 1152, 1231, 1683
PspCI CACGTG 1 cut(s) 2306
PspFI CCCAGC 1 cut(s) 3125
PspGI CCWGG 6 cut(s) 387, 559, 658, 1152, 1231, 1683
PspN4I GGNNCC 6 cut(s) 520, 1749, 2052, 2117, 2584, 4181
PspPI GGNCC 8 cut(s) 18, 385, 519, 1308, 1482, 1941, 2212, 4291
PspPPI RGGWCCY 1 cut(s) 2212
PsrI GAACNNNNNNTAC 2 cut(s) 3153, 3185
PstI CTGCAG 2 cut(s) 1177, 2635
PstNI CAGNNNCTG 2 cut(s) 1643, 1658
PsuI RGATCY 2 cut(s) 789, 2115
PsyI GACNNNGTC 2 cut(s) 2555, 3283
PvuII CAGCTG 1 cut(s) 1658
RsaI GTAC 4 cut(s) 1442, 1599, 3800, 3916
RsaNI GTAC 4 cut(s) 1441, 1598, 3799, 3915
RseI CAYNNNNRTG 1 cut(s) 751
SacI GAGCTC 1 cut(s) 2410
SalI GTCGAC 1 cut(s) 2447
Sau96I GGNCC 8 cut(s) 18, 385, 519, 1308, 1482, 1941, 2212, 4291
ScaI AGTACT 1 cut(s) 1599
SchI GAGTC 7 cut(s) 1112, 1143, 1194, 1216, 2149, 2886, 4226
ScrFI CCNGG 7 cut(s) 389, 561, 660, 1154, 1233, 1685, 2587
SduI GDGCHC 4 cut(s) 838, 2410, 3019, 4133
SfcI CTRYAG 4 cut(s) 1173, 2631, 3145, 3876
SinI GGWCC 3 cut(s) 18, 1308, 2212
SmiMI CAYNNNNRTG 1 cut(s) 751
SmlI CTYRAG 4 cut(s) 794, 974, 2189, 4046
SmoI CTYRAG 4 cut(s) 794, 974, 2189, 4046
SpeI ACTAGT 1 cut(s) 4189
SsiI CCGC 1 cut(s) 425
SspI AATATT 5 cut(s) 118, 855, 2143, 2221, 2475
SspMI CTAG 9 cut(s) 83, 353, 897, 1137, 1704, 1724, 2613, 3399, 4190
SstI GAGCTC 1 cut(s) 2410
StyD4I CCNGG 7 cut(s) 387, 559, 658, 1152, 1231, 1683, 2585
StyI CCWWGG 1 cut(s) 2160
TaiI ACGT 6 cut(s) 1721, 1773, 2308, 3448, 3946, 4165
TaqI TCGA 5 cut(s) 832, 2448, 2517, 2938, 3090
TatI WGTACW 1 cut(s) 1597
TseFI GTSAC 6 cut(s) 899, 1104, 1602, 1660, 3725, 4395
Tsp45I GTSAC 6 cut(s) 899, 1104, 1602, 1660, 3725, 4395
TspGWI ACGGA 1 cut(s) 882
Tth111I GACNNNGTC 2 cut(s) 2555, 3283
Van91I CCANNNNNTGG 1 cut(s) 3498
VpaK11BI GGWCC 3 cut(s) 18, 1308, 2212
VspI ATTAAT 3 cut(s) 767, 1959, 2825
XagI CCTNNNNNAGG 1 cut(s) 657
XceI RCATGY 2 cut(s) 1677, 3643
XcmI CCANNNNNNNNNTGG 1 cut(s) 4213
XmiI GTMKAC 4 cut(s) 276, 1738, 2331, 2448
XmnI GAANNNNTTC 3 cut(s) 807, 2497, 3359
XspI CTAG 9 cut(s) 83, 353, 897, 1137, 1704, 1724, 2613, 3399, 4190
ZraI GACGTC 1 cut(s) 1771
ZrmI AGTACT 1 cut(s) 1599
Zsp2I ATGCAT 1 cut(s) 3645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.