Rroxscaffold_3G00260200

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0002044
Physical Location & Seq
Reverse (-)
54646734 .. 54652958
6225 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00260200.1

Sequence Viewer

Length: 4467 bp
ATGGCGGAAGGGTACTGGACCTTGTTCTGTGATTGTTCAACTGAGTCTGGAATTGAATGCAGTTCTGACATTGCAGCCATTATCAATCCAGATTCATGTATCAACAATATTGCGGTCATTGCAGTTGATATCTCGCTTCTATTCATCTTGTTTTGTATCTTCATCTATAGATTATCAAAGAAGGTTATAGCATCATCAGAGTCTTACACCTTCTCTGCTGTGTCAATTGTTTCAGCCACTTTCAATGCCTGTTTGTCTTTCACCTATTTGGGTTTTGGGATATGGAAAACGGTCGAGAAAGTAAACACAGATCAAACTTTTTTACCTCTGCATGGATGGCTAGTGTTTTTCTTTCAGGGGTTTACTTGGTTTGTGCTGGGATTAACCATAAACCTAAAGAAGCCACACCCTCTCCACATTGCAATAACAAAAGTTCTTTCAATTCTTGGCTTTTTTATTGCAGTTTTTCTTTGTGGTTCATCAATTTGGGAAGCTATTCTTGATGAAGCAGTATCGGTTATGATTGTTTTGAACATTCTTTGTTTCCCTGGATCAGTTCTCTTGCTTTTTAGTGCATTTGAGGGATACAATGTTGCTAAAGGTGATCCACAAGTCCATGTTGACGATGCTCTGGACACACCTTTGCTGGGTGCAGAATCGGATATTACAGGTGAAATTACTTCAAATCATGACAATGTTACTCCTTTTGCAAAAGCTGGTTTATTTAGTAGAATGTCATTTTGGTGGTTGAATCCATTACTGAAAAAAGGAAAGAGGAAGATTCTTGAGAATGAAGATATCCCACAGCTGAGAGAAGCTGATCAAGCACAAACATTGTACTTGATGTTTAAGGAGCAAATGCAGAAAAGGAAGGAAAACATTTCATCTGATGATGAACCTTCTATTTTGTCCACAGTTTTTTTCTGCCAGAGGAAAGCTATTCTGATTTCTGGTATCTTTGCACTCATCAAGGTTCTCACACTGACCAGCGGTCCACTGTTTCTGAGGGCCTTCATTAGGGTTGTTGGAGGAGAAGCAGCTTTTGAAGGTGAAGGCTATGCCCTGACTGCTGGTCTCTTTGTGGTTAAAGTCGTGGAGTCATTGTCGGAGAGGCAATGGTTCTTCAGAACTAGACTTATTGGTCTCCAGGTAAGATCATTGATATCAGCAGCAATATATCAGAAGCAACTAAGACTCTCAAATGCTGCCAAGATGACTCATTCTCCTGGTGAGATAGTGAATTATGTGAGCGTGGATGCTTATAGAATCGGTGAATTTCCATTCTGGTTTCATCAGATATGGTCCACAAGTCTTCAGTTGCTTCTTTCATTACTTATCTTTTATTACTGCGTGGGGATAGCAACTCTTGCAGCTATAACTGTAATCATAGTGACTCTGCTGGGAAGCTCTCCATTAGCAAAGTTGCAGCATGAGTATCAAACTAAGCTCATGGTAGCACAGAACAAGAGGCTGAAGGCCATTACAGAAGCACTTTCCAATATGAAGATTTTGAAGCTGTATTCTTGGGAGACAAATTTCAAGATGGTCATAGAAGGGTTGAGAACAGAAGAACTCAAATGGATAGCTAAAGTACTGTCACAAAAGGGATATTACAATGTTCTATTCTGGTCATCTCCTATTGTGGTAGCAGCTGTCACTTTTTGGACATGCTACTTCCTGGGATTTACACTCTCTGCTAGTAGTGCTTTCACATTTCTAGCAACTTTACGTATTGTTCAGGAGCCAATCAAGCTGATGCCGGATGTTTTTGGAGCATTTATCGAAGCCAAGGTTTCTTTCTCTCGGATCGTGAAGTTCCTTGATGCACCAGAGTTGGAGCACAGAGATACAAGGAAAGAGAGCAGTGAAAAAGAGGTTGAGCATTCCATTTTGTTTAAATCCTTTGAAATTTCATGGGATACTGCTGCTACAAAGGCCACATTGAGGGACATCAATTTGGTGGTAAAACCAGGAGAAAAAGTCGCTATTTGTGGTGAGGTTGGCTCAGGAAAATCAACCCTTTTAGCTGCAATTCTCGGAGAAGTTCCACGGATCAATGGTGTTGTTGAAGTATACGGCACAATAGCATATGTATCTCAGTCTGCATGGATCCAAACAGGAACTATACAAGAAAATATACTGTTTGGGACTCCCATGGATCATGTAAGATATCAAGAAACACTTCAAAAGTGTTCCTTGGTAAAGGACCTTGATATGCTTCCATTTGGGGATCGCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGCGGCCAGAAGCAGCGGATTCAACTTGCACGTGCACTCTATCAAAATGCTGATGTCTACCTCTTAGATGACCCTTTCAGTGCAGTTGATGCCCACACTGCGACCAGCCTGTTCAATGAATATGTCATGGAAGCTCTGGCTGAGAAGACAGTTCTGCTTGTCACACACCAAGTTGACTTCCTTCCTGCTTTTCATTCAATCTTGTTGATGTCGTCGGGGGAAATTTTAAAAGCAGCACCTTATGATGAGTTGCTAGCTTCTTGTCATGAGTTCCAAGACCTTGTGAATGCAAACAATGACACTGCTGGTTCAGAGAGGCCAAATGAAAATGCTTCTACAGAAAAACTTAAATCATCTGCGAAGGAGATTGAGAAAGTAACTACTGAGGTACAGCTACAAGAGTCTGCAGGGGATCAATTGATTAAGAGAGAAGAGAGAGAAACAGGGGACATTGGTTTCAAGCCATACATTCAGTATTTGAAGCAGGGCAGGGGATTTTTCAACTTCTCCTTGTCAATTTTTCTCTACTCGATGTTCATAGTTGGGCAGTTACTTCAGTTTTATTGGTTGGCTTTGAACATTCAGGATTATAGTATATCCAGAGTCAAACTCTATGCAGTTTATTCTGTGATCATGATTGTCATGATAGTCTCTTTGCTCATTCGATCTTTCTTTATAGTAGATTTAGGAGTTGGGGCAGGAAAGTCCATTTTTTTGACACTACTGAACTCTCTTTTCCGAGCACCAATGTTGTTTTATGACTCAACACCTGTGGGAAGAATACTTAGTCGGGTGTCGTCGGATATGAATATCATTGACCTTGAAGTAGCTTTCAAGTTGATAATTGCTGTTGGGGGAACCTTGAACACATACAGCATATTTCTAGTACTGGTTTATCTTACTTGGCCGATGGTGTTTCTAGTTGTCCCCACAATCTATATTACTATGCTCTTTCAGAACTACTACATGGCTTCTGCAAAAGAGTTGATGCGAATGAATGGCACAACTAAGTCTGCACTTGCAAGCCAGCTTGCCGAATCTATTGCTGGAGCCCTGACAATCAGAGCTTTCAGACAGGAGGACAGATTCTTCACAAAATACTTGGACTTTATCGATGCAAATGCTAGCACTGATTTCCATGGTTTTTCCACAAATGAGTGGTTGATCGAACGCCTGGAATTGCTATGTGCTATTGTTCTCTCAGCTGCAGCACTTGCCATTACTTTAACTCCATATTCCTCTTCTTCCTCTGGGTTTATTGGGATGACACTGTCATATGGTCTCTCCTTAAATGTTTTCCTCGTAATTTCTGTCAAATTTCAGTGCATGCTAGCAAATTCAATCATTTCTGTAGAAAGGGTAGAACAATACATGCATATTCCAAGTGAAGCCGCAGAAGTAATAGAAGACAATCGACCGATGCAAAATTGGCCTACTGTTGGTAAAGTGGAAATACATGATTTAAAGGTTAGATATAGGCCAAATGCTCCTCTCGTTCTTCGTGGGATAACTTGCACAATCGAAGGAGGGTACAAAGTTGGAATTGTTGGCCGGACTGGAAGTGGAAAGACAACTCTTATCAGCGTTTTGTTTCGACTTGTAGAGCCTACAGAGGGAAAGGTCATTGTAGATGGTTATGACATTTGCACAATTGGACTTCATGACTTAAGATCATGTTTTGGGATCATCCCTCAAGATCCAACTCTATTCAGTGGGTCTGTGAGGTTCAATCTAGACCCCTTATCGAAGCATACTGATCATGAGATATGGCTGGTGCTTGAGAAATGTCAGTTACGAGAGGCCATTCAAGAAAAAGCAGAGGGCCTGGATTCTTTAGTTGTACAAGATGGAACAAACTGGAGCATGGGACAGCGACAGCTGTTCTGTTTGGGGCGCGCTTTGTTAAAGAGGAGCCGAATACTAGTGCTTGATGAAGCCACTGCATCAATGGACAATGCAACAGACTCTATTCTCCAGAAAACTATTAGAACAGAATTTGCTGACTGCACTGTAATAACAGTGGCACATAGGATACCAACTGTCATGGACTGCACCAAGGTGCTTGCTATTGCTGATGGTAAACTGGTAGAGTATGATGAGCCAACCAAGCTGATGAACAATGAGGGATCATTATTTGGGCAGCTTGTCAAGGAATACTGGTCTCGTTCTGCCAATGTCGGCATCCACAGTGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1488

Amino Acids

166.23

Weight (kDa)

5.75

Isoelectric Point (pI)

32.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 3 - 197 1.5e-65 ABCC10 N-terminal domain
ABC_membrane PF00664 314 - 582 3.7e-23 ABC transporter transmembrane region
ABC_tran PF00005 648 - 782 4.6e-22 ABC transporter
ABC_membrane PF00664 929 - 1175 4.3e-25 ABC transporter transmembrane region
ABC_tran PF00005 1256 - 1404 1.1e-23 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1140
AccI GTMKAC 2 cut(s) 2073, 2325
AccII CGCG 1 cut(s) 4164
AciI CCGC 6 cut(s) 5, 113, 990, 2271, 2284, 3660
AcoI YGGCCR 3 cut(s) 2272, 3173, 3817
AcsI RAATTY 7 cut(s) 1274, 1534, 1908, 2490, 3584, 3604, 4262
AcuI CTGAAG 4 cut(s) 1108, 1298, 1493, 2807
AcvI CACGTG 1 cut(s) 2300
AfaI GTAC 7 cut(s) 14, 839, 1593, 2658, 3156, 3800, 4110
AfiI CCNNNNNNNGG 6 cut(s) 332, 647, 1017, 1944, 3707, 3881
AflII CTTAAG 1 cut(s) 3934
AhdI GACNNNNNGTC 2 cut(s) 990, 1071
AhlI ACTAGT 1 cut(s) 4189
AjnI CCWGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3441, 4092
AjuI GAANNNNNNNTTGG 4 cut(s) 724, 756, 1781, 1813
AleI CACNNNNGTG 1 cut(s) 4325
Alw21I GWGCWC 3 cut(s) 1842, 2305, 3013
Alw26I GTCTC 6 cut(s) 1079, 1148, 1523, 2923, 3554, 4434
Alw44I GTGCAC 1 cut(s) 2301
ApaLI GTGCAC 1 cut(s) 2301
ApoI RAATTY 7 cut(s) 1274, 1534, 1908, 2490, 3584, 3604, 4262
Asp700I GAANNNNTTC 2 cut(s) 495, 2181
AspLEI GCGC 2 cut(s) 4164, 4166
AspS9I GGNCC 6 cut(s) 18, 992, 1008, 1302, 2206, 4090
AsuHPI GGTGA 7 cut(s) 253, 614, 683, 1061, 1241, 1283, 2006
AsuNHI GCTAGC 3 cut(s) 2521, 3392, 3598
AvaII GGWCC 4 cut(s) 18, 992, 1302, 2206
BaeGI GKGCMC 1 cut(s) 2305
BamHI GGATCC 1 cut(s) 2109
BanII GRGCYC 1 cut(s) 3322
BbrPI CACGTG 1 cut(s) 2300
BbsI GAAGAC 3 cut(s) 1304, 2420, 3681
Bbv12I GWGCWC 3 cut(s) 1842, 2305, 3013
BccI CCATC 6 cut(s) 330, 1537, 3172, 3893, 4109, 4337
BceAI ACGGC 1 cut(s) 2092
BcgI CGANNNNNNTGC 4 cut(s) 3293, 3327, 3371, 3405
BciT130I CCWGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3443, 4094
BciVI GTATCC 3 cut(s) 578, 1912, 4293
BclI TGATCA 3 cut(s) 820, 2898, 4024
BcoDI GTCTC 6 cut(s) 1079, 1148, 1523, 2923, 3554, 4434
BcuI ACTAGT 1 cut(s) 4189
BfmI CTRYAG 6 cut(s) 166, 2604, 2673, 3474, 3618, 3876
BfrI CTTAAG 1 cut(s) 3934
BfuI GTATCC 3 cut(s) 578, 1912, 4293
BmcAI AGTACT 2 cut(s) 1593, 3156
Bme1390I CCNGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3443, 4094
Bme18I GGWCC 4 cut(s) 18, 992, 1302, 2206
BmeRI GACNNNNNGTC 2 cut(s) 990, 1071
BmgT120I GGNCC 6 cut(s) 18, 992, 1008, 1302, 2206, 4090
BmiI GGNNCC 5 cut(s) 1743, 2111, 3127, 3319, 4181
BmrFI CCNGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3443, 4094
BmtI GCTAGC 3 cut(s) 2525, 3396, 3602
BpiI GAAGAC 3 cut(s) 1304, 2420, 3681
BplI GAGNNNNNCTC 4 cut(s) 1988, 2020, 2862, 2894
BpmI CTGGAG 4 cut(s) 1130, 3336, 4147, 4226
Bpu10I CCTNAGC 1 cut(s) 2005
BpuEI CTTGAG 3 cut(s) 806, 3945, 4067
Bsa29I ATCGAT 1 cut(s) 3381
BsaAI YACGTR 2 cut(s) 1730, 2300
BsaI GGTCTC 4 cut(s) 1079, 1148, 3554, 4434
BsaJI CCNNGG 8 cut(s) 547, 1678, 1788, 2048, 2154, 2196, 3406, 4323
Bsc4I CCNNNNNNNGG 6 cut(s) 332, 647, 1017, 1944, 3707, 3881
Bse1I ACTGG 6 cut(s) 20, 3162, 3829, 4130, 4356, 4430
Bse3DI GCAATG 4 cut(s) 69, 117, 417, 1121
BseBI CCWGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3443, 4094
BseCI ATCGAT 1 cut(s) 3381
BseDI CCNNGG 8 cut(s) 547, 1678, 1788, 2048, 2154, 2196, 3406, 4323
BseGI GGATG 6 cut(s) 341, 1261, 1768, 3537, 3954, 4449
BseLI CCNNNNNNNGG 6 cut(s) 332, 647, 1017, 1944, 3707, 3881
BseMI GCAATG 4 cut(s) 69, 117, 417, 1121
BseMII CTCAG 9 cut(s) 33, 800, 995, 2019, 2111, 2252, 2400, 2643, 3483
BseNI ACTGG 6 cut(s) 20, 3162, 3829, 4130, 4356, 4430
BsePI GCGCGC 1 cut(s) 4162
BseRI GAGGAG 3 cut(s) 1044, 3747, 4192
BseSI GKGCMC 1 cut(s) 2305
BseYI CCCAGC 3 cut(s) 376, 646, 1399
BsgI GTGCAG 5 cut(s) 672, 2370, 3267, 4258, 4303
Bsh1236I CGCG 1 cut(s) 4164
Bsh1285I CGRYCG 2 cut(s) 294, 3686
BshVI ATCGAT 1 cut(s) 3381
BsiEI CGRYCG 2 cut(s) 294, 3686
BsiHKAI GWGCWC 3 cut(s) 1842, 2305, 3013
BsiSI CCGG 2 cut(s) 1760, 3820
BslFI GGGAC 5 cut(s) 1961, 2161, 2729, 3179, 4149
BslI CCNNNNNNNGG 6 cut(s) 332, 647, 1017, 1944, 3707, 3881
BsmAI GTCTC 6 cut(s) 1079, 1148, 1523, 2923, 3554, 4434
BsmFI GGGAC 5 cut(s) 1961, 2161, 2729, 3179, 4149
BsmI GAATGC 3 cut(s) 62, 1882, 2560
Bso31I GGTCTC 4 cut(s) 1079, 1148, 3554, 4434
Bsp1286I GDGCHC 4 cut(s) 1842, 2305, 3013, 3322
Bsp1407I TGTACA 1 cut(s) 4108
Bsp19I CCATGG 2 cut(s) 2154, 3406
BspACI CCGC 6 cut(s) 5, 113, 990, 2271, 2284, 3660
BspCNI CTCAG 9 cut(s) 34, 801, 996, 2018, 2110, 2251, 2401, 2644, 3482
BspDI ATCGAT 1 cut(s) 3381
BspFNI CGCG 1 cut(s) 4164
BspHI TCATGA 6 cut(s) 688, 2533, 2901, 2910, 3928, 4027
BspLI GGNNCC 5 cut(s) 1743, 2111, 3127, 3319, 4181
BspMAI CTGCAG 2 cut(s) 2677, 3478
BspOI GCTAGC 3 cut(s) 2525, 3396, 3602
BspTI CTTAAG 1 cut(s) 3934
BspTNI GGTCTC 4 cut(s) 1079, 1148, 3554, 4434
BsrDI GCAATG 4 cut(s) 69, 117, 417, 1121
BsrGI TGTACA 1 cut(s) 4108
BsrI ACTGG 6 cut(s) 20, 3162, 3829, 4130, 4356, 4430
BssECI CCNNGG 8 cut(s) 547, 1678, 1788, 2048, 2154, 2196, 3406, 4323
BssHII GCGCGC 1 cut(s) 4162
BssNAI GTATAC 1 cut(s) 2074
BssT1I CCWWGG 5 cut(s) 1788, 2154, 2196, 3406, 4323
Bst1107I GTATAC 1 cut(s) 2074
Bst2UI CCWGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3443, 4094
Bst6I CTCTTC 2 cut(s) 2694, 3514
BstAFI CTTAAG 1 cut(s) 3934
BstAPI GCANNNNNTGC 3 cut(s) 1367, 2357, 3482
BstAUI TGTACA 1 cut(s) 4108
BstBAI YACGTR 2 cut(s) 1730, 2300
BstC8I GCNNGC 9 cut(s) 2523, 3292, 3296, 3300, 3394, 3596, 3600, 4164, 4332
BstDSI CCRYGG 3 cut(s) 2048, 2154, 3406
BstENI CCTNNNNNAGG 1 cut(s) 1015
BstF5I GGATG 6 cut(s) 341, 1261, 1768, 3537, 3954, 4449
BstFNI CGCG 1 cut(s) 4164
BstHHI GCGC 2 cut(s) 4164, 4166
BstMAI GTCTC 6 cut(s) 1079, 1148, 1523, 2923, 3554, 4434
BstMCI CGRYCG 2 cut(s) 294, 3686
BstNI CCWGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3443, 4094
BstNSI RCATGY 3 cut(s) 1671, 3598, 3643
BstSCI CCNGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3441, 4092
BstSFI CTRYAG 6 cut(s) 166, 2604, 2673, 3474, 3618, 3876
BstSLI GKGCMC 1 cut(s) 2305
BstSNI TACGTA 1 cut(s) 1730
BstUI CGCG 1 cut(s) 4164
BstV2I GAAGAC 3 cut(s) 1304, 2420, 3681
BstX2I RGATCY 2 cut(s) 2109, 3964
BstYI RGATCY 2 cut(s) 2109, 3964
BstZ17I GTATAC 1 cut(s) 2074
Bsu15I ATCGAT 1 cut(s) 3381
BsuI GTATCC 3 cut(s) 578, 1912, 4293
BsuTUI ATCGAT 1 cut(s) 3381
BtgI CCRYGG 3 cut(s) 2048, 2154, 3406
BtsCI GGATG 6 cut(s) 341, 1261, 1768, 3537, 3954, 4449
BtsI GCAGTG 4 cut(s) 1870, 2364, 2568, 4206
Cac8I GCNNGC 9 cut(s) 2523, 3292, 3296, 3300, 3394, 3596, 3600, 4164, 4332
CciI TCATGA 6 cut(s) 688, 2533, 2901, 2910, 3928, 4027
CfoI GCGC 2 cut(s) 4164, 4166
Cfr13I GGNCC 6 cut(s) 18, 992, 1008, 1302, 2206, 4090
ClaI ATCGAT 1 cut(s) 3381
Csp6I GTAC 7 cut(s) 13, 838, 1592, 2657, 3155, 3799, 4109
CspCI CAANNNNNGTGG 4 cut(s) 2248, 2283, 3021, 3056
CviQI GTAC 7 cut(s) 13, 838, 1592, 2657, 3155, 3799, 4109
DraI TTTAAA 3 cut(s) 1897, 2496, 3732
DrdI GACNNNNNNGTC 1 cut(s) 1140
DriI GACNNNNNGTC 2 cut(s) 990, 1071
DseDI GACNNNNNNGTC 1 cut(s) 1140
EaeI YGGCCR 3 cut(s) 2272, 3173, 3817
Eam1104I CTCTTC 2 cut(s) 2694, 3514
Eam1105I GACNNNNNGTC 2 cut(s) 990, 1071
EarI CTCTTC 2 cut(s) 2694, 3514
EciI GGCGGA 1 cut(s) 20
Eco105I TACGTA 1 cut(s) 1730
Eco130I CCWWGG 5 cut(s) 1788, 2154, 2196, 3406, 4323
Eco24I GRGCYC 1 cut(s) 3322
Eco31I GGTCTC 4 cut(s) 1079, 1148, 3554, 4434
Eco32I GATATC 4 cut(s) 130, 799, 1164, 2171
Eco47I GGWCC 4 cut(s) 18, 992, 1302, 2206
Eco57I CTGAAG 4 cut(s) 1108, 1298, 1493, 2807
Eco72I CACGTG 1 cut(s) 2300
EcoNI CCTNNNNNAGG 1 cut(s) 1015
EcoO109I RGGNCCY 3 cut(s) 1008, 2206, 4090
EcoRII CCWGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3441, 4092
EcoRV GATATC 4 cut(s) 130, 799, 1164, 2171
EcoT14I CCWWGG 5 cut(s) 1788, 2154, 2196, 3406, 4323
EcoT22I ATGCAT 1 cut(s) 3645
EcoT38I GRGCYC 1 cut(s) 3322
ErhI CCWWGG 5 cut(s) 1788, 2154, 2196, 3406, 4323
FalI AAGNNNNNCTT 6 cut(s) 483, 515, 2166, 2198, 2180, 2212
FaqI GGGAC 5 cut(s) 1961, 2161, 2729, 3179, 4149
FauNDI CATATG 2 cut(s) 2089, 3544
FbaI TGATCA 3 cut(s) 820, 2898, 4024
FblI GTMKAC 2 cut(s) 2073, 2325
FokI GGATG 6 cut(s) 348, 1268, 1775, 3544, 3941, 4436
FriOI GRGCYC 1 cut(s) 3322
GlaI GCGC 2 cut(s) 4163, 4165
GsaI CCCAGC 3 cut(s) 380, 650, 1403
GsuI CTGGAG 4 cut(s) 1130, 3336, 4147, 4226
HapII CCGG 2 cut(s) 1760, 3820
HhaI GCGC 2 cut(s) 4164, 4166
Hin6I GCGC 2 cut(s) 4162, 4164
HinP1I GCGC 2 cut(s) 4162, 4164
HincII GTYRAC 2 cut(s) 622, 2443
HindII GTYRAC 2 cut(s) 622, 2443
HpaII CCGG 2 cut(s) 1760, 3820
HphI GGTGA 7 cut(s) 253, 614, 683, 1061, 1241, 1283, 2006
Hpy99I CGWCG 2 cut(s) 2485, 3070
HpyCH4IV ACGT 2 cut(s) 1729, 2299
HpySE526I ACGT 2 cut(s) 1729, 2299
HspAI GCGC 2 cut(s) 4162, 4164
Ksp22I TGATCA 3 cut(s) 820, 2898, 4024
LmnI GCTCC 8 cut(s) 853, 1741, 1772, 1837, 3317, 3760, 4128, 4179
MaeII ACGT 2 cut(s) 1729, 2299
MaeIII GTNAC 8 cut(s) 697, 1390, 1596, 1654, 2428, 2644, 2817, 4059
MfeI CAATTG 3 cut(s) 225, 2684, 3918
MflI RGATCY 2 cut(s) 2109, 3964
MhlI GDGCHC 4 cut(s) 1842, 2305, 3013, 3322
MmeI TCCRAC 6 cut(s) 1006, 1086, 1815, 3048, 3787, 3992
Mph1103I ATGCAT 1 cut(s) 3645
MroXI GAANNNNTTC 2 cut(s) 495, 2181
MslI CAYNNNNRTG 3 cut(s) 693, 742, 4325
MspA1I CMGCKG 6 cut(s) 808, 990, 1652, 2284, 3473, 4147
MspCI CTTAAG 1 cut(s) 3934
MspI CCGG 2 cut(s) 1760, 3820
MspR9I CCNGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3443, 4094
MunI CAATTG 3 cut(s) 225, 2684, 3918
Mva1269I GAATGC 3 cut(s) 62, 1882, 2560
MvaI CCWGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3443, 4094
MvnI CGCG 1 cut(s) 4164
NcoI CCATGG 2 cut(s) 2154, 3406
NdeI CATATG 2 cut(s) 2089, 3544
NheI GCTAGC 3 cut(s) 2521, 3392, 3598
NlaIV GGNNCC 5 cut(s) 1743, 2111, 3127, 3319, 4181
NmuCI GTSAC 4 cut(s) 1390, 1596, 1654, 2428
NsiI ATGCAT 1 cut(s) 3645
NspI RCATGY 3 cut(s) 1671, 3598, 3643
OliI CACNNNNGTG 1 cut(s) 4325
PaeI GCATGC 1 cut(s) 3598
PagI TCATGA 6 cut(s) 688, 2533, 2901, 2910, 3928, 4027
PauI GCGCGC 1 cut(s) 4162
PctI GAATGC 3 cut(s) 62, 1882, 2560
PdmI GAANNNNTTC 2 cut(s) 495, 2181
PfeI GAWTC 9 cut(s) 92, 656, 751, 781, 1266, 2287, 3305, 3354, 4097
PflFI GACNNNGTC 1 cut(s) 3538
PmaCI CACGTG 1 cut(s) 2300
PmlI CACGTG 1 cut(s) 2300
Ppu21I YACGTR 2 cut(s) 1730, 2300
PpuMI RGGWCCY 1 cut(s) 2206
Psp5II RGGWCCY 1 cut(s) 2206
Psp6I CCWGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3441, 4092
PspCI CACGTG 1 cut(s) 2300
PspFI CCCAGC 3 cut(s) 376, 646, 1399
PspGI CCWGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3441, 4092
PspN4I GGNNCC 5 cut(s) 1743, 2111, 3127, 3319, 4181
PspPI GGNCC 6 cut(s) 18, 992, 1008, 1302, 2206, 4090
PspPPI RGGWCCY 1 cut(s) 2206
PstI CTGCAG 2 cut(s) 2677, 3478
PsuI RGATCY 2 cut(s) 2109, 3964
PsyI GACNNNGTC 1 cut(s) 3538
PteI GCGCGC 1 cut(s) 4162
PvuII CAGCTG 4 cut(s) 808, 1652, 3473, 4147
RsaI GTAC 7 cut(s) 14, 839, 1593, 2658, 3156, 3800, 4110
RsaNI GTAC 7 cut(s) 13, 838, 1592, 2657, 3155, 3799, 4109
RseI CAYNNNNRTG 3 cut(s) 693, 742, 4325
Sau96I GGNCC 6 cut(s) 18, 992, 1008, 1302, 2206, 4090
ScaI AGTACT 2 cut(s) 1593, 3156
ScrFI CCNGG 7 cut(s) 549, 1148, 1227, 1679, 1971, 3443, 4094
SduI GDGCHC 4 cut(s) 1842, 2305, 3013, 3322
SfcI CTRYAG 6 cut(s) 166, 2604, 2673, 3474, 3618, 3876
SinI GGWCC 4 cut(s) 18, 992, 1302, 2206
SmiMI CAYNNNNRTG 3 cut(s) 693, 742, 4325
SmlI CTYRAG 4 cut(s) 785, 3934, 3960, 4046
SmoI CTYRAG 4 cut(s) 785, 3934, 3960, 4046
SnaBI TACGTA 1 cut(s) 1730
SpeI ACTAGT 1 cut(s) 4189
SphI GCATGC 1 cut(s) 3598
SsiI CCGC 6 cut(s) 5, 113, 990, 2271, 2284, 3660
SspI AATATT 1 cut(s) 109
StyD4I CCNGG 7 cut(s) 547, 1146, 1225, 1677, 1969, 3441, 4092
StyI CCWWGG 5 cut(s) 1788, 2154, 2196, 3406, 4323
TaiI ACGT 2 cut(s) 1732, 2302
TaqII GACCGA 1 cut(s) 3700
TatI WGTACW 4 cut(s) 837, 1591, 3154, 4108
TauI GCSGC 2 cut(s) 2274, 3662
TfiI GAWTC 9 cut(s) 92, 656, 751, 781, 1266, 2287, 3305, 3354, 4097
TseFI GTSAC 4 cut(s) 1390, 1596, 1654, 2428
Tsp45I GTSAC 4 cut(s) 1390, 1596, 1654, 2428
TspGWI ACGGA 1 cut(s) 2065
Tth111I GACNNNGTC 1 cut(s) 3538
Vha464I CTTAAG 1 cut(s) 3934
VneI GTGCAC 1 cut(s) 2301
VpaK11BI GGWCC 4 cut(s) 18, 992, 1302, 2206
XagI CCTNNNNNAGG 1 cut(s) 1015
XapI RAATTY 7 cut(s) 1274, 1534, 1908, 2490, 3584, 3604, 4262
XbaI TCTAGA 1 cut(s) 4000
XceI RCATGY 3 cut(s) 1671, 3598, 3643
XcmI CCANNNNNNNNNTGG 1 cut(s) 4213
XmiI GTMKAC 2 cut(s) 2073, 2325
XmnI GAANNNNTTC 2 cut(s) 495, 2181
ZrmI AGTACT 2 cut(s) 1593, 3156
Zsp2I ATGCAT 1 cut(s) 3645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.