Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002044

Physical Location & Seq

Genomic Coordinates Reverse (-)

1829639 .. 1831840

Gene Structure 2202 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0025900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGGGTGGAAATGGAAAGCACAGGTGGAAGATCTCCTTCTACCGCTCCACCTCCTCCGCAAAGCAGCCGCCCAAAGAGTTCCTGTGTCCTATTTCCGGGTCTTTAATGTCCGACCCGGTCATCGTCGCCTCCGGCCAGACATTCGAGCGCCGCTCCGTCCAAGTCTGCCGCCAATTCGGCTACGCGCCCGAGCTCCCCGACGGCACCCGGCCCGATTTCTCCAACTTAATCCCTAACATGGCAATCAAGACCACCATCCTCAATTGGTGCGACCAACACCACTCCGACCGCCCCCAGCCCCCGGATTTGGCCTCCGTCGAGAAGAACGTCCGGGCCCTGATGGAGGAGAGCAGGGTCGATCAGGGAATTAGGGTTTCGGAGAGGGAATTGCTTAAAGGCGTGGCGGAGCGGCCGCCGATTATGTTCTCTCACGCCGCCACCGAGCTCGGCCGCGGCCGCGTCGACCATTTCTACTCCAGCTCGTCGGAAGAGTCCGTCGTCATCGCCTCCCCAAGTCCTTACACTCCTCTTCCCTTCGCGACTCGGCCGTCGTGTTACTCCTCCTCGCCTTCTTCGTCCGAAATTGTGGAACTCGAAACCCTAAATCCCAATTCGATTAATCTAAGTGCGGAGGAGGAAGAATTGATGACTAAGCTCGGTAGCTCCGTCATAGTCGAGCAAGAAGAGGCGGTGATTTCACTGAGGAAGCTGACCAGAACCAAAGAGGAGCTCAGGGTTTCGCTCTGCACGCCGCGGCTGCTCTCGTCCCTCCGATCTCTGATCGTCTCGCGCTACAGCACCGTCCAAGTCAACGCCGCCGCGTCGCTGGTCAACCTCTCGCTGGAGAAGCCGAACAAGGTGAAGATCGTGCGGTCGGGATTCGTCCCGCCGCTGGTCGACGTTTTGAAAAGCGGATCCGGCGAGTCCCAGGAGCACGCCGCCGGCGCGCTCTTCAGCCTGGCCTTGGAAGAAGACAACAAGATGGCGATCGGGGTCCTCGGCGCGTTGCCGCCGCTCATGCACGCGCTGGTAAGGTCGGAGAGTGAGCGCACGCGCCACGACTCGGCTCTGGCGCTCTACCACCTGACGCTGGTGGAGAGCAACCGAATCAAACTCGTGAAGCTGAACGCGGTGCCGACGCTTCTGGCGCTGTCGAAGGCGCCCGGGTCGGCGGGTCGGGTTTTGTTGATACTGTGCAACCTGGCGATCTGCGGCGAGGGGAGGTCGGCGATGCTGGACGCGAACGCGGTGGAGTGTTTGGTCGGGATGCTGAGGAGGAACGAGTTGGACTCGGAGTCGACGCGCGAGAACTGCGTGGCGGCGCTGTACGCGCTGAGCCACGGGTCGATGAGGTTCCGGGGGCTGGCGAGGGAGGCGAAGGCGGTGGAGGTGTTGAGTGAGGTGGAGAAGAGAGGGAGCGAGAGGGCGAGGGAGAAGGCCAAGAGGCTGTTGATGATCATGAGAGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGGAGGGCGGAGGATGGTCAGCCGGATTGGGAGGGGGTTTTGGATTCGGGTACTGGAGTTGGGCTCGGCGCGGGAACCCGGTACCGAGTTGGGCCTGGTAGGAGCTTGCATACTGCCAACTCAACAACCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

542

Amino Acids

58.54

Weight (kDa)

8.49

Isoelectric Point (pI)

54.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	24 - 94	1.3e-10	U-box domain
ARM_PUB	PF25598	226 - 487	1.7e-06	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	248 - 466	1.1e-10	ARMC5
Arm	PF00514	284 - 321	4.1e-06	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002044)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g03781 FvH4_5g03782 FvH4_5g03784 FvH4_5g03800
malus_domestica	MD06G1098900.v1.1 MD06G1099000.v1.1 MD06G1099100.v1.1 MD14G1118100.v1.1 MD14G1118200.v1.1
prunus_persica	Prupe.5G112700_v2.0.a1 Prupe.5G112700_v2.0.a1 Prupe.5G112700_v2.0.a1 Prupe.5G112700_v2.0.a1 Prupe.5G112800_v2.0.a1
pyrus_communis	pycom06g09410 pycom06g09420 pycom06g09460
rosa_chinensis	RchiOBHm_Chr7g0195711 RchiOBHm_Chr7g0195721 RchiOBHm_Chr7g0195751 RchiOBHm_Chr7g0195781 RchiOBHm_Chr7g0195801
rosa_laevigata	RLG00000004087 RLG00000004090 RLG00000004092 RLG00000004093
rosa_multiflora	Rmu_sc0003314.1_g000027 Rmu_sc0003314.1_g000031
rosa_roxburghii	Rroxscaffold_3G00260080 Rroxscaffold_3G00260190 Rroxscaffold_3G00260200
rosa_rugosa	Rorug07G0025800.1 Rorug07G0025900 Rorug07G0026000 Rorug07G0026300
rosa_samantha	Rh7BG155600 Rh7BG155700 Rh7BG155900 Rh7BG156000 Rh7CG159600 Rh7CG159800
rosa_wichuraiana	Rw7G013140 Rw7G013150 Rw7G013160 Rw7G013180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	547
Acc65I	GGTACC	1 cut(s)	1575
AccB1I	GGYRCC	4 cut(s)	203, 1132, 1159, 1575
AccBSI	CCGCTC	4 cut(s)	45, 153, 409, 1015
AccI	GTMKAC	3 cut(s)	462, 897, 1298
AclWI	GGATC	2 cut(s)	909, 922
AcoI	YGGCCR	5 cut(s)	133, 410, 448, 454, 545
AcuI	CTGAAG	1 cut(s)	937
AcyI	GRCGYC	1 cut(s)	1160
AfaI	GTAC	3 cut(s)	1328, 1546, 1577
AgsI	TTSAA	1 cut(s)	907
AhdI	GACNNNNNGTC	1 cut(s)	1294
AjnI	CCWGG	4 cut(s)	927, 957, 1200, 1588
AluBI	AGCT	9 cut(s)	193, 445, 480, 655, 663, 709, 730, 1123, 1599
AluI	AGCT	9 cut(s)	193, 445, 480, 655, 663, 709, 730, 1123, 1599
Alw21I	GWGCWC	4 cut(s)	195, 447, 732, 936
Alw26I	GTCTC	1 cut(s)	790
AlwI	GGATC	2 cut(s)	909, 922
Ama87I	CYCGRG	2 cut(s)	188, 1163
ApaI	GGGCCC	1 cut(s)	337
ApeKI	GCWGC	2 cut(s)	64, 757
AseI	ATTAAT	1 cut(s)	618
Asp718I	GGTACC	1 cut(s)	1575
AspS9I	GGNCC	5 cut(s)	210, 333, 334, 994, 1586
AsuC2I	CCSGG	9 cut(s)	97, 116, 208, 302, 332, 1164, 1165, 1358, 1573
AsuHPI	GGTGA	2 cut(s)	703, 871
AvaI	CYCGRG	2 cut(s)	188, 1163
AvaII	GGWCC	1 cut(s)	994
BaeGI	GKGCMC	1 cut(s)	337
BaeI	ACNNNNGTAYC	2 cut(s)	1536, 1569
BamHI	GGATCC	1 cut(s)	914
BanI	GGYRCC	4 cut(s)	203, 1132, 1159, 1575
BanII	GRGCYC	5 cut(s)	195, 337, 447, 732, 1560
BauI	CACGAG	1 cut(s)	1115
BbsI	GAAGAC	1 cut(s)	978
Bbv12I	GWGCWC	4 cut(s)	195, 447, 732, 936
BbvCI	CCTCAGC	1 cut(s)	1271
BbvI	GCAGC	2 cut(s)	76, 744
BccI	CCATC	4 cut(s)	263, 334, 976, 1502
BceAI	ACGGC	2 cut(s)	217, 532
BciT130I	CCWGG	4 cut(s)	929, 959, 1202, 1590
BclI	TGATCA	1 cut(s)	1455
BcnI	CCSGG	9 cut(s)	97, 116, 208, 302, 332, 1164, 1165, 1358, 1573
BcoDI	GTCTC	1 cut(s)	790
BfmI	CTRYAG	1 cut(s)	793
BfoI	RGCGCY	5 cut(s)	151, 1076, 1151, 1163, 1325
BglI	GCCNNNNNGGC	1 cut(s)	177
BglII	AGATCT	1 cut(s)	30
BlpI	GCTNAGC	1 cut(s)	1334
Bme18I	GGWCC	1 cut(s)	994
BmeRI	GACNNNNNGTC	1 cut(s)	1294
BmeT110I	CYCGRG	2 cut(s)	188, 1163
BmgT120I	GGNCC	5 cut(s)	210, 333, 334, 994, 1586
BmiI	GGNNCC	9 cut(s)	205, 335, 916, 995, 1134, 1161, 1355, 1570, 1577
BmsI	GCATC	2 cut(s)	1221, 1257
BpiI	GAAGAC	1 cut(s)	978
BplI	GAGNNNNNCTC	6 cut(s)	137, 169, 1274, 1306, 1542, 1574
BpmI	CTGGAG	3 cut(s)	460, 863, 1569
Bpu10I	CCTNAGC	2 cut(s)	731, 1271
Bpu1102I	GCTNAGC	1 cut(s)	1334
BpuMI	CCSGG	9 cut(s)	97, 116, 208, 302, 332, 1164, 1165, 1358, 1573
BsaBI	GATNNNNATC	1 cut(s)	986
BsaHI	GRCGYC	1 cut(s)	1160
BsaJI	CCNNGG	9 cut(s)	300, 451, 752, 927, 963, 997, 1163, 1339, 1357
Bse118I	RCCGGY	1 cut(s)	941
Bse1I	ACTGG	1 cut(s)	1552
Bse8I	GATNNNNATC	1 cut(s)	986
BseBI	CCWGG	4 cut(s)	929, 959, 1202, 1590
BseDI	CCNNGG	9 cut(s)	300, 451, 752, 927, 963, 997, 1163, 1339, 1357
BseGI	GGATG	3 cut(s)	255, 1272, 1513
BseJI	GATNNNNATC	1 cut(s)	986
BseMII	CTCAG	4 cut(s)	692, 745, 1262, 1325
BseNI	ACTGG	1 cut(s)	1552
BsePI	GCGCGC	1 cut(s)	945
BseSI	GKGCMC	1 cut(s)	337
BseX3I	CGGCCG	4 cut(s)	410, 448, 454, 545
BseXI	GCAGC	2 cut(s)	76, 744
BseYI	CCCAGC	1 cut(s)	294
BsgI	GTGCAG	1 cut(s)	730
Bsh1285I	CGRYCG	7 cut(s)	289, 413, 451, 457, 548, 875, 990
BshNI	GGYRCC	4 cut(s)	203, 1132, 1159, 1575
BsiEI	CGRYCG	7 cut(s)	289, 413, 451, 457, 548, 875, 990
BsiHKAI	GWGCWC	4 cut(s)	195, 447, 732, 936
BsiHKCI	CYCGRG	2 cut(s)	188, 1163
BslFI	GGGAC	3 cut(s)	751, 869, 910
BsmAI	GTCTC	1 cut(s)	790
BsmBI	CGTCTC	1 cut(s)	790
BsmFI	GGGAC	3 cut(s)	751, 869, 910
BsoBI	CYCGRG	2 cut(s)	188, 1163
Bsp120I	GGGCCC	1 cut(s)	333
Bsp1286I	GDGCHC	6 cut(s)	195, 337, 447, 732, 936, 1560
Bsp143I	GATC	9 cut(s)	30, 358, 773, 780, 864, 914, 987, 1206, 1455
Bsp1720I	GCTNAGC	1 cut(s)	1334
Bsp68I	TCGCGA	1 cut(s)	539
BspCNI	CTCAG	4 cut(s)	693, 744, 1263, 1326
BspHI	TCATGA	1 cut(s)	1458
BspLI	GGNNCC	9 cut(s)	205, 335, 916, 995, 1134, 1161, 1355, 1570, 1577
BspPI	GGATC	2 cut(s)	909, 922
BspQI	GCTCTTC	1 cut(s)	956
BspT107I	GGYRCC	4 cut(s)	203, 1132, 1159, 1575
BsrBI	CCGCTC	4 cut(s)	45, 153, 409, 1015
BsrFI	RCCGGY	1 cut(s)	941
BsrI	ACTGG	1 cut(s)	1552
BssAI	RCCGGY	1 cut(s)	941
BssECI	CCNNGG	9 cut(s)	300, 451, 752, 927, 963, 997, 1163, 1339, 1357
BssHII	GCGCGC	1 cut(s)	945
BssMI	GATC	9 cut(s)	30, 358, 773, 780, 864, 914, 987, 1206, 1455
BssNI	GRCGYC	1 cut(s)	1160
BssSI	CACGAG	1 cut(s)	1115
BssT1I	CCWWGG	1 cut(s)	963
Bst2BI	CACGAG	1 cut(s)	1115
Bst2UI	CCWGG	4 cut(s)	929, 959, 1202, 1590
Bst4CI	ACNGT	2 cut(s)	802, 1194
Bst6I	CTCTTC	5 cut(s)	483, 534, 678, 956, 1403
BstACI	GRCGYC	1 cut(s)	1160
BstC8I	GCNNGC	8 cut(s)	749, 936, 943, 947, 1023, 1052, 1365, 1601
BstDEI	CTNAG	6 cut(s)	623, 651, 701, 731, 1271, 1334
BstDSI	CCRYGG	3 cut(s)	451, 752, 1339
BstENI	CCTNNNNNAGG	1 cut(s)	341
BstF5I	GGATG	3 cut(s)	255, 1272, 1513
BstH2I	RGCGCY	5 cut(s)	151, 1076, 1151, 1163, 1325
BstKTI	GATC	9 cut(s)	33, 361, 776, 783, 867, 917, 990, 1209, 1458
BstMAI	GTCTC	1 cut(s)	790
BstMBI	GATC	9 cut(s)	30, 358, 773, 780, 864, 914, 987, 1206, 1455
BstMCI	CGRYCG	7 cut(s)	289, 413, 451, 457, 548, 875, 990
BstNI	CCWGG	4 cut(s)	929, 959, 1202, 1590
BstSFI	CTRYAG	1 cut(s)	793
BstSLI	GKGCMC	1 cut(s)	337
BstV1I	GCAGC	2 cut(s)	76, 744
BstV2I	GAAGAC	1 cut(s)	978
BstX2I	RGATCY	2 cut(s)	30, 914
BstYI	RGATCY	2 cut(s)	30, 914
BstZI	CGGCCG	4 cut(s)	410, 448, 454, 545
BtgI	CCRYGG	3 cut(s)	451, 752, 1339
BtgZI	GCGATG	2 cut(s)	487, 1244
BtsCI	GGATG	3 cut(s)	255, 1272, 1513
BtsIMutI	CAGTG	1 cut(s)	698
BtuMI	TCGCGA	1 cut(s)	539
Cac8I	GCNNGC	8 cut(s)	749, 936, 943, 947, 1023, 1052, 1365, 1601
CciI	TCATGA	1 cut(s)	1458
CciNI	GCGGCCGC	2 cut(s)	410, 454
Cfr10I	RCCGGY	1 cut(s)	941
Cfr13I	GGNCC	5 cut(s)	210, 333, 334, 994, 1586
Cfr42I	CCGCGG	2 cut(s)	454, 755
Cfr9I	CCCGGG	1 cut(s)	1163
CseI	GACGC	6 cut(s)	448, 810, 1096, 1147, 1247, 1309
Csp6I	GTAC	3 cut(s)	1327, 1545, 1576
CviAII	CATG	3 cut(s)	238, 1018, 1459
CviQI	GTAC	3 cut(s)	1327, 1545, 1576
DdeI	CTNAG	6 cut(s)	623, 651, 701, 731, 1271, 1334
DinI	GGCGCC	1 cut(s)	1161
DpnI	GATC	9 cut(s)	32, 360, 775, 782, 866, 916, 989, 1208, 1457
DpnII	GATC	9 cut(s)	30, 358, 773, 780, 864, 914, 987, 1206, 1455
DrdI	GACNNNNNNGTC	1 cut(s)	547
DriI	GACNNNNNGTC	1 cut(s)	1294
DseDI	GACNNNNNNGTC	1 cut(s)	547
EaeI	YGGCCR	5 cut(s)	133, 410, 448, 454, 545
EagI	CGGCCG	4 cut(s)	410, 448, 454, 545
Eam1104I	CTCTTC	5 cut(s)	483, 534, 678, 956, 1403
Eam1105I	GACNNNNNGTC	1 cut(s)	1294
EarI	CTCTTC	5 cut(s)	483, 534, 678, 956, 1403
EciI	GGCGGA	3 cut(s)	419, 1488, 1517
Ecl136II	GAGCTC	3 cut(s)	193, 445, 730
EclXI	CGGCCG	4 cut(s)	410, 448, 454, 545
Eco130I	CCWWGG	1 cut(s)	963
Eco24I	GRGCYC	5 cut(s)	195, 337, 447, 732, 1560
Eco47I	GGWCC	1 cut(s)	994
Eco52I	CGGCCG	4 cut(s)	410, 448, 454, 545
Eco53kI	GAGCTC	3 cut(s)	193, 445, 730
Eco57I	CTGAAG	1 cut(s)	937
Eco88I	CYCGRG	2 cut(s)	188, 1163
EcoICRI	GAGCTC	3 cut(s)	193, 445, 730
EcoNI	CCTNNNNNAGG	1 cut(s)	341
EcoO109I	RGGNCCY	2 cut(s)	334, 994
EcoRII	CCWGG	4 cut(s)	927, 957, 1200, 1588
EcoT14I	CCWWGG	1 cut(s)	963
EcoT38I	GRGCYC	5 cut(s)	195, 337, 447, 732, 1560
EgeI	GGCGCC	1 cut(s)	1161
EheI	GGCGCC	1 cut(s)	1161
ErhI	CCWWGG	1 cut(s)	963
Esp3I	CGTCTC	1 cut(s)	790
FaeI	CATG	3 cut(s)	241, 1021, 1462
FaiI	YATR	6 cut(s)	239, 422, 671, 1019, 1460, 1605
FalI	AAGNNNNNCTT	2 cut(s)	20, 52
FaqI	GGGAC	3 cut(s)	751, 869, 910
FatI	CATG	3 cut(s)	237, 1017, 1458
FauI	CCCGC	3 cut(s)	894, 1165, 1558
FbaI	TGATCA	1 cut(s)	1455
FblI	GTMKAC	3 cut(s)	462, 897, 1298
FokI	GGATG	3 cut(s)	242, 1279, 1520
FriOI	GRGCYC	5 cut(s)	195, 337, 447, 732, 1560
GsaI	CCCAGC	1 cut(s)	298
GsuI	CTGGAG	3 cut(s)	460, 863, 1569
HaeII	RGCGCY	5 cut(s)	151, 1076, 1151, 1163, 1325
HgaI	GACGC	6 cut(s)	448, 810, 1096, 1147, 1247, 1309
Hin1I	GRCGYC	1 cut(s)	1160
Hin1II	CATG	3 cut(s)	241, 1021, 1462
HincII	GTYRAC	5 cut(s)	463, 811, 832, 898, 1299
HindII	GTYRAC	5 cut(s)	463, 811, 832, 898, 1299
HinfI	GANTC	9 cut(s)	491, 541, 879, 923, 1061, 1107, 1289, 1295, 1538
HphI	GGTGA	2 cut(s)	703, 871
Hpy166II	GTNNAC	5 cut(s)	463, 811, 832, 898, 1299
Hpy188I	TCNGA	9 cut(s)	112, 286, 379, 487, 580, 773, 780, 1039, 1294
Hpy188III	TCNNGA	7 cut(s)	247, 319, 538, 876, 1117, 1264, 1459
Hpy8I	GTNNAC	5 cut(s)	463, 811, 832, 898, 1299
HpyAV	CCTTC	6 cut(s)	46, 544, 579, 1150, 1372, 1429
HpyCH4III	ACNGT	2 cut(s)	802, 1194
HpyCH4IV	ACGT	2 cut(s)	327, 900
HpyCH4V	TGCA	4 cut(s)	747, 1021, 1197, 1603
HpyF3I	CTNAG	6 cut(s)	623, 651, 701, 731, 1271, 1334
HpySE526I	ACGT	2 cut(s)	327, 900
Hsp92I	GRCGYC	1 cut(s)	1160
Hsp92II	CATG	3 cut(s)	241, 1021, 1462
KasI	GGCGCC	1 cut(s)	1159
KpnI	GGTACC	1 cut(s)	1579
KroI	GCCGGC	1 cut(s)	941
KroNI	GCCGGC	1 cut(s)	943
Ksp22I	TGATCA	1 cut(s)	1455
KspI	CCGCGG	2 cut(s)	454, 755
Kzo9I	GATC	9 cut(s)	30, 358, 773, 780, 864, 914, 987, 1206, 1455
LguI	GCTCTTC	1 cut(s)	956
LmnI	GCTCC	9 cut(s)	50, 158, 198, 406, 668, 727, 931, 1416, 1596
Lsp1109I	GCAGC	2 cut(s)	76, 744
LweI	GCATC	2 cut(s)	1221, 1257
MaeII	ACGT	2 cut(s)	327, 900
MaeIII	GTNAC	1 cut(s)	554
MalI	GATC	9 cut(s)	32, 360, 775, 782, 866, 916, 989, 1208, 1457
MbiI	CCGCTC	4 cut(s)	45, 153, 409, 1015
MboI	GATC	9 cut(s)	30, 358, 773, 780, 864, 914, 987, 1206, 1455
MfeI	CAATTG	1 cut(s)	262
MflI	RGATCY	2 cut(s)	30, 914
MhlI	GDGCHC	6 cut(s)	195, 337, 447, 732, 936, 1560
MluCI	AATT	7 cut(s)	173, 262, 366, 386, 582, 610, 641
Mly113I	GGCGCC	1 cut(s)	1160
MlyI	GAGTC	6 cut(s)	500, 535, 932, 1055, 1283, 1304
MmeI	TCCRAC	6 cut(s)	135, 246, 309, 465, 1017, 1266
MreI	CGCCGGCG	1 cut(s)	941
MroNI	GCCGGC	1 cut(s)	941
MseI	TTAA	4 cut(s)	104, 227, 393, 618
MspA1I	CMGCKG	3 cut(s)	453, 754, 892
MunI	CAATTG	1 cut(s)	262
MvaI	CCWGG	4 cut(s)	929, 959, 1202, 1590
NaeI	GCCGGC	1 cut(s)	943
NarI	GGCGCC	1 cut(s)	1160
NciI	CCSGG	9 cut(s)	97, 116, 208, 302, 332, 1164, 1165, 1358, 1573
NdeII	GATC	9 cut(s)	30, 358, 773, 780, 864, 914, 987, 1206, 1455
NgoMIV	GCCGGC	1 cut(s)	941
NlaIII	CATG	3 cut(s)	241, 1021, 1462
NlaIV	GGNNCC	9 cut(s)	205, 335, 916, 995, 1134, 1161, 1355, 1570, 1577
NmeAIII	GCCGAG	5 cut(s)	426, 523, 978, 1043, 1539
NotI	GCGGCCGC	2 cut(s)	410, 454
NruI	TCGCGA	1 cut(s)	539
PagI	TCATGA	1 cut(s)	1458
PauI	GCGCGC	1 cut(s)	945
PciSI	GCTCTTC	1 cut(s)	956
PcsI	WCGNNNNNNNCGW	4 cut(s)	324, 438, 572, 663
PdiI	GCCGGC	1 cut(s)	943
PfeI	GAWTC	3 cut(s)	879, 1107, 1538
PflFI	GACNNNGTC	1 cut(s)	116
Ple19I	CGATCG	1 cut(s)	990
PleI	GAGTC	6 cut(s)	499, 535, 931, 1055, 1283, 1303
PluTI	GGCGCC	1 cut(s)	1163
PpsI	GAGTC	6 cut(s)	499, 535, 931, 1055, 1283, 1303
PpuMI	RGGWCCY	1 cut(s)	994
PshBI	ATTAAT	1 cut(s)	618
Psp124BI	GAGCTC	3 cut(s)	195, 447, 732
Psp5II	RGGWCCY	1 cut(s)	994
Psp6I	CCWGG	4 cut(s)	927, 957, 1200, 1588
PspFI	CCCAGC	1 cut(s)	294
PspGI	CCWGG	4 cut(s)	927, 957, 1200, 1588
PspN4I	GGNNCC	9 cut(s)	205, 335, 916, 995, 1134, 1161, 1355, 1570, 1577
PspOMI	GGGCCC	1 cut(s)	333
PspPI	GGNCC	5 cut(s)	210, 333, 334, 994, 1586
PspPPI	RGGWCCY	1 cut(s)	994
PsuI	RGATCY	2 cut(s)	30, 914
PsyI	GACNNNGTC	1 cut(s)	116
PteI	GCGCGC	1 cut(s)	945
PvuI	CGATCG	1 cut(s)	990
RruI	TCGCGA	1 cut(s)	539
RsaI	GTAC	3 cut(s)	1328, 1546, 1577
RsaNI	GTAC	3 cut(s)	1327, 1545, 1576
SacI	GAGCTC	3 cut(s)	195, 447, 732
SacII	CCGCGG	2 cut(s)	454, 755
SalI	GTCGAC	3 cut(s)	461, 896, 1297
SapI	GCTCTTC	1 cut(s)	956
SaqAI	TTAA	4 cut(s)	104, 227, 393, 618
Sau3AI	GATC	9 cut(s)	30, 358, 773, 780, 864, 914, 987, 1206, 1455
Sau96I	GGNCC	5 cut(s)	210, 333, 334, 994, 1586
SchI	GAGTC	6 cut(s)	500, 535, 932, 1055, 1283, 1304
SduI	GDGCHC	6 cut(s)	195, 337, 447, 732, 936, 1560
SfaNI	GCATC	2 cut(s)	1221, 1257
SfcI	CTRYAG	1 cut(s)	793
SfoI	GGCGCC	1 cut(s)	1161
Sfr303I	CCGCGG	2 cut(s)	454, 755
SgrAI	CRCCGGYG	1 cut(s)	941
SgrBI	CCGCGG	2 cut(s)	454, 755
SinI	GGWCC	1 cut(s)	994
SmaI	CCCGGG	1 cut(s)	1165
Sse9I	AATT	7 cut(s)	173, 262, 366, 386, 582, 610, 641
SspDI	GGCGCC	1 cut(s)	1159
SstI	GAGCTC	3 cut(s)	195, 447, 732
StyI	CCWWGG	1 cut(s)	963
TaaI	ACNGT	2 cut(s)	802, 1194
TaiI	ACGT	2 cut(s)	330, 903
TasI	AATT	7 cut(s)	173, 262, 366, 386, 582, 610, 641
TfiI	GAWTC	3 cut(s)	879, 1107, 1538
Tru1I	TTAA	4 cut(s)	104, 227, 393, 618
Tru9I	TTAA	4 cut(s)	104, 227, 393, 618
TscAI	CASTG	1 cut(s)	705
TseI	GCWGC	2 cut(s)	64, 757
TspGWI	ACGGA	4 cut(s)	145, 304, 484, 655
TspMI	CCCGGG	1 cut(s)	1163
TspRI	CASTG	1 cut(s)	705
Tth111I	GACNNNGTC	1 cut(s)	116
VpaK11BI	GGWCC	1 cut(s)	994
VspI	ATTAAT	1 cut(s)	618
XagI	CCTNNNNNAGG	1 cut(s)	341
XmaI	CCCGGG	1 cut(s)	1163
XmiI	GTMKAC	3 cut(s)	462, 897, 1298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.