RchiOBHm_Chr7g0195801

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0002044
Physical Location & Seq
Forward (+)
13662599 .. 13669987
7389 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17513

Sequence Viewer

Length: 4332 bp
ATGGGGGAGGGTTTCTGGACCTTATTCTGCACCAGTTCCGAGTGTTCAAATGGGTCTGGAAATGAATGCAGCTCTGGCATTCTAGCCATTATCGATCCAAATTCATGTATCAACAATATTGTCGTCATTGCAGTTGATATTTTGCTCCTACTCATCTTGTTATGTTTCCTTATGTATAGAATAGCATCAAAGAAGATTATAGCACCATCACAGCCTCAAACGTTCTCTCCAGTATCAGTTGTGTCAATCAGTTTCAATGCAGGTTTGGCATTGGCCTACTTGGGGTCTGGGATATGGACAATCATTGAGAAAGTATATACGTATCACATGGTTTTACCTCTACATGGATGGCTAGTATATTTTTTTCAAGGGTTTACATGGTTGGGCCTGGGTTTTACCATAAACCTCTCAAAACCACACCTTCCGCATAACGCAATAATGAAATTCTTTTCAATTTTTGGTTTCTTAATTGCAGTTTTCCTTTGTGGTTCATCAATTTGGGAATCTATTCTGGATGGGGCCTTATCAGTTCTGATTGTTTTAAACATTCTTTGTTTCCCGGGATCAATTCTCTTGCTCTTTAGTGCATTTGAAGGAACAAATAATGCAAAAGGTGATCCAGAAGTCCATAATGGTCATGCTTTCTACACACCTTTGCCAGGTGCAGAACCAGATATCACAGGTGATATCAGTCCGAATGACACTGTAACTCCTTTTGCAAAAGCTGGATTATTTAGTAAAATGTCATTTTGGTGGTTGAATCCATTAATGAAGAAAGGTAAGGAAAAGATCCTTGAGAATGAAGATATTCCACAATTGCGAGAAGCTGATCGAGCACGAACATTGCACTCAATATTCAGGGAGCAATTGCATAAAAGAAAGGAAAGTCATCCGTCTAGTGACCCTTCTATTCTGACCATAATTTTTTTCTGCCAGTGGAAAGCAATTTTGGTTTCAGGGTTCTTTGCACTCCTCAAGATTCTCGCAATGACTGCCTCCCCACTGTTTCTCATAGCTTTCATTAAGGTTGTTGATGGCGATGCAGCTTTTAAATATGAGGTTTATGCACTGACTGCTGGTCTGTTCGTTGTGAAAATCGTGGAGTCACTGTCAGAGAGGCAATGGTTCTTTAGAACTAGACTTATTGGACTCCAGGTAAGATCATTGATATCTGCAGCGGTTTATCAGAAGCAACTAAGACTCTCAAATGCTGCCAAGACGACTCATTCTCCTGGTGAGATAGTGAACTATGTAACAGTGGATGCTTACAGAATCGGTGAATTTCCTTACTGGTTTCATCAGATATGGTCCACAAACCTTCAATTGTGTCTCTCACTACTTATTATTTACTTCTCTGTTGGGGCAGCAACTCTTGCAGCTCTAACTGTTCTCATATTGACTATGGTGGTAAGCTCTCCATTGGCGAAGTTGCAGCATGAGTACCAAACAAAGTTCATGATTGCACAAAACAAGAGGTTGAGGGCCATTACAGAAGCACTATCAAATATGAAAATCTTGAAGCTGTATTCTTGGGAGACAAATTTCAAGAAAGTCATAGAAGGTTTTAGAGCAGAAGAACTCAAATGGATAGCTAAAGTACTGTCACAAAAGGGATATTGTAATGCTTTATTCTGGACGGCTCCTGTTTTGGCAGCAGCTGTCACCTTTTGGACATGTTACTTCCTGGGATTTACACTCACAGCTAGCAATGTTTTCACGTTTCTAGCAACTTTGCGTATACTTCAGGAGCCAATTAGGCTAATCCCAGACGTCTTTGGAGCATTTATTGAAGCAAAGGTTTCATTTTCTCGGATTGTGAAGTTTCTTGATGCCCCAGAGTTGGAGAACAGACATACAAGGAAACAGAGCTGTGACAGGGAGGTTGAGCATTCAATTTTCATTAGAGCCTCTGAAATTTCATGGGATATAGAAGCTACAAGGGCCACATTGAGGGACATTAATTTAGTGGTTAAGCAAGGAGAAAAAGTAGCTATTTGTGGAGAGGTTGGCTCAGGAAAATCAACCCTTTTAGCTGGAATTCTTGGAGAGGTTCCACGCATCAATGGCATTGTTCAAGTATATGGCACGATAGCATATGTCTCTCAGTCTGCATGGATCCAAACAGGAACTATACAAGATAATATTCTGTTTGGGACTCCCATGGATCATGTTAGATACCAAGAAACTCTTGAGAAGTGTTCTCTCATAAAGGACCTCAATATTCTTCCATTCGGCGATCTCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGTGGCCAGAAACAGCGCATTCAACTTGCACGTGCATTGTATCAAAATGCTGAAGTCTACTTATTGGATGATCCTTTCAGTGCTGTTGATGCTCATACTGCCATAAGCCTGTTCAATGAATATGTCATGGGAGCTCTGGCAGAGAAGACAGTGTTGCTTGTTACACACCAAGTCGACTTCCTTCCAGCTTTTAATTCAATATTGTTGATGTCTTGGGGAAAAATTTCAAGAGCAGCTCCTTTCGACGAGTTACTGGCTTCTTGTCAAGAGTTCCAAGACCTTGTCAATGCACATAATGACACTGCTGGTTCCGGGAGGCAAGTTCAATATGCTTCTACTAGGAAACAGAAATTGGCTGCAGAGGAGATTGAGAAAGAAAGAACAGAGGTAGAGCTAAAAGAATCTTCAGGAGATCAATTGATTAAGAAAGAAGAGAGAGAAACAGGAGACACAGGGTTCAAGCCATACATTCAGTATTTGAAGCATAGCAGGGGCTTTTTGCATTTCTCCTTATCAGTTCTTTTCTTGTTTCTGTTCATTGTTGGGCAATTAATTCAGAATTATTGGTTGGCTTTGAATCTTCAGGACTATAGCGTGTCCAGAGTCAAACTCTTCACAGTTTATTCTGTGATCTTCTGTATAATGTCATTCTTTTTGCTTCTTCGATCTTTTATGATAGTTGATTTAGGATGTGGAGCTTCAGAATCTATTTTCTCTGCACTACTGAACTCTCTTTTCCGAGCACCAATGCTGTTTTATGATTCAACACCTGTGGGGAGGATACTTAGTCGGGTATCTACTGATATGAATATCATCGACCTTGAAGTAGGTTTAAAGTTGGCATTTGCTGCTGGGGCGATTGTTAGCGCCTACAGCATATTTTTGGTATTGGTTGTTCTTGCTTGGCCACTCGTGTTTCTGATTGCACCTACAATTTATCTTACTTATCTGTTTCAGAATTACTACTTTGCTTCTGCAAAAGAGTTAATGCGAATGAATGGCACGACTAAGTCTGCGATTGCAAGCCAACTTTCTGAATCTATTGCTGGAGCAATGACAATCAGAGCTTTTGGAGAGGAGAAACGATTCTATTCAAAAAACTTGGAATTTATTGATGCAAATTCTAGTGCTGACTTCAATAGTTTCTCAACAAATGAGTGGTTAACCGAACGTCTGGAATTTCTGTGTGCTATTGTTCTCTCAGCCTCAGCCATTGCCATTACTTGGATAGATGCTTCTTCCTCTGGATTTGTTGGGATGACACTATCATATGGTCTCTCATTAAATGTATTCCTCGTAACTTCTGTCCAACTTCAGTGCATGATAGGAAATTCAATTGTTTCTGTTGAAAGGGTAGAACAATACATGCATATTACCAGTGAATCTGCACAAATAATAGAAGAAAACCGACCCGCACACAATTGGCCTGTTGTTGGTAAAGTGGAAATATGTGACTTAAAGGTCAGATATAGGCCAAATTCTCCTTTGGTTCTTCGTGGGATAAATTGCATAATTGAAGGAGGGTACAAAGTTGGAATCGTTGGCCGGACTGGAAGTGGAAAGACAACTCTTATCAGCGTTTTGTTTCGTCTGGTAGAGCCTACAGGGGGAAAAGTCATTATAGATGATTATGACATTTGTACCATTGGTCTTCATGATTTAAGATCACGTTTGGGGATCATCCCACAAGAGCCAACGTTATTCGGTGGCTCTGTGAGATTCAACCTTGACCCCTTATCAGAGCATACTGATCTTGAAATATGGGAGGTTCTTGAGAAATGCCAGTTACGAAAGGCCATTGAAGAGAAAGAAGAGGGTCTGGACACCTTTGTTGTGCAAGATGGAACAAACTGGAGCACGGGGCAGCGTCAACTATTTTTGGCCCATAGGATACCAACCGTGATGGACTGCACTAAAGTTCTTGCTATAAGTGATGGGCTATTAGTAGAGTATGATGAGCCAGTGAAGCTGATGAACAATGAGGGGTCACTGTTTGGGCAGCTTGTGAAGGAATACTGGTCGCGTTCTGCCAATGCTGCCATCCATTCAGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1443

Amino Acids

161.19

Weight (kDa)

6.12

Isoelectric Point (pI)

34.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 3 - 201 5.4e-69 ABCC10 N-terminal domain
ABC_membrane PF00664 317 - 584 5.1e-27 ABC transporter transmembrane region
ABC_tran PF00005 650 - 784 1.3e-20 ABC transporter
ABC_membrane PF00664 929 - 1181 1.5e-26 ABC transporter transmembrane region
ABC_tran PF00005 1256 - 1383 1.5e-14 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 3734
AatII GACGTC 1 cut(s) 1773
Acc36I ACCTGC 1 cut(s) 251
AccB7I CCANNNNNTGG 1 cut(s) 3498
AccI GTMKAC 3 cut(s) 1738, 2331, 2448
AccII CGCG 1 cut(s) 4297
AciI CCGC 3 cut(s) 425, 1178, 3687
AclI AACGTT 2 cut(s) 221, 3971
AclWI GGATC 9 cut(s) 89, 571, 611, 784, 2110, 2123, 2172, 2339, 3959
AcoI YGGCCR 3 cut(s) 2278, 3179, 3817
AcuI CTGAAG 6 cut(s) 1727, 2346, 2664, 2840, 2958, 3572
AcvI CACGTG 1 cut(s) 2306
AcyI GRCGYC 1 cut(s) 1770
AfaI GTAC 4 cut(s) 1442, 1599, 3800, 3916
AfiI CCNNNNNNNGG 8 cut(s) 282, 344, 659, 1840, 1950, 3498, 3707, 3881
AflIII ACRYGT 1 cut(s) 1673
AhdI GACNNNNNGTC 1 cut(s) 1077
AjnI CCWGG 5 cut(s) 387, 658, 1152, 1231, 1683
AjuI GAANNNNNNNTTGG 6 cut(s) 932, 964, 2609, 2641, 2825, 2857
Alw21I GWGCWC 4 cut(s) 838, 2410, 3019, 4133
Alw26I GTCTC 5 cut(s) 1334, 1529, 2104, 2715, 3554
AlwI GGATC 9 cut(s) 89, 571, 611, 784, 2110, 2123, 2172, 2339, 3959
AlwNI CAGNNNCTG 1 cut(s) 1658
Ama87I CYCGRG 1 cut(s) 559
AseI ATTAAT 3 cut(s) 767, 1959, 2825
Asp700I GAANNNNTTC 4 cut(s) 507, 807, 2497, 3359
AspLEI GCGC 2 cut(s) 2292, 3143
AspS9I GGNCC 8 cut(s) 18, 385, 519, 1308, 1482, 1941, 2212, 4156
AsuC2I CCSGG 3 cut(s) 560, 561, 2587
AsuHPI GGTGA 5 cut(s) 626, 695, 1247, 1289, 1654
AsuNHI GCTAGC 1 cut(s) 1703
AvaI CYCGRG 1 cut(s) 559
AvaII GGWCC 3 cut(s) 18, 1308, 2212
BaeI ACNNNNGTAYC 2 cut(s) 3898, 3931
BalI TGGCCA 2 cut(s) 2280, 3181
BamHI GGATCC 1 cut(s) 2115
BanII GRGCYC 1 cut(s) 2410
BauI CACGAG 1 cut(s) 3185
BbrPI CACGTG 1 cut(s) 2306
BbsI GAAGAC 2 cut(s) 2426, 3917
Bbv12I GWGCWC 4 cut(s) 838, 2410, 3019, 4133
BbvCI CCTCAGC 1 cut(s) 3481
BccI CCATC 8 cut(s) 214, 342, 509, 1028, 4109, 4171, 4202, 4322
BceAI ACGGC 1 cut(s) 1653
BciT130I CCWGG 5 cut(s) 389, 660, 1154, 1233, 1685
BciVI GTATCC 2 cut(s) 3048, 4158
BcnI CCSGG 3 cut(s) 560, 561, 2587
BcoDI GTCTC 5 cut(s) 1334, 1529, 2104, 2715, 3554
BfaI CTAG 8 cut(s) 83, 353, 897, 1137, 1704, 1724, 2613, 3399
BfmI CTRYAG 5 cut(s) 1173, 2631, 2863, 3145, 3876
BfoI RGCGCY 1 cut(s) 3144
BfuAI ACCTGC 1 cut(s) 251
BfuI GTATCC 2 cut(s) 3048, 4158
BglI GCCNNNNNGGC 1 cut(s) 1756
BmcAI AGTACT 1 cut(s) 1599
Bme1390I CCNGG 8 cut(s) 389, 560, 561, 660, 1154, 1233, 1685, 2587
Bme18I GGWCC 3 cut(s) 18, 1308, 2212
BmeRI GACNNNNNGTC 1 cut(s) 1077
BmeT110I CYCGRG 1 cut(s) 559
BmgT120I GGNCC 8 cut(s) 18, 385, 519, 1308, 1482, 1941, 2212, 4156
BmiI GGNNCC 6 cut(s) 520, 1641, 1749, 2052, 2117, 2584
BmrFI CCNGG 8 cut(s) 389, 560, 561, 660, 1154, 1233, 1685, 2587
BmsI GCATC 8 cut(s) 194, 1030, 1252, 1819, 2067, 2353, 3379, 3496
BmtI GCTAGC 1 cut(s) 1707
BpiI GAAGAC 2 cut(s) 2426, 3917
BplI GAGNNNNNCTC 4 cut(s) 1994, 2026, 2868, 2900
BpmI CTGGAG 4 cut(s) 213, 1136, 3342, 4147
Bpu10I CCTNAGC 2 cut(s) 2011, 3481
BpuEI CTTGAG 4 cut(s) 815, 959, 2210, 4067
BpuMI CCSGG 3 cut(s) 560, 561, 2587
Bsa29I ATCGAT 1 cut(s) 93
BsaAI YACGTR 2 cut(s) 321, 2306
BsaHI GRCGYC 1 cut(s) 1770
BsaI GGTCTC 1 cut(s) 3554
BsaJI CCNNGG 4 cut(s) 388, 559, 1684, 2160
Bsc4I CCNNNNNNNGG 8 cut(s) 282, 344, 659, 1840, 1950, 3498, 3707, 3881
Bse3DI GCAATG 7 cut(s) 126, 842, 993, 1127, 1714, 3333, 3486
BseBI CCWGG 5 cut(s) 389, 660, 1154, 1233, 1685
BseCI ATCGAT 1 cut(s) 93
BseDI CCNNGG 4 cut(s) 388, 559, 1684, 2160
BseGI GGATG 9 cut(s) 353, 520, 889, 1267, 2347, 2969, 3537, 3954, 4314
BseLI CCNNNNNNNGG 8 cut(s) 282, 344, 659, 1840, 1950, 3498, 3707, 3881
BseMI GCAATG 7 cut(s) 126, 842, 993, 1127, 1714, 3333, 3486
BseMII CTCAG 5 cut(s) 2025, 2117, 2258, 3489, 3495
BseRI GAGGAG 3 cut(s) 962, 2651, 3365
BseYI CCCAGC 1 cut(s) 3125
BsgI GTGCAG 5 cut(s) 13, 684, 2976, 3645, 4168
Bsh1236I CGCG 1 cut(s) 4297
BshVI ATCGAT 1 cut(s) 93
BsiHKAI GWGCWC 4 cut(s) 838, 2410, 3019, 4133
BsiHKCI CYCGRG 1 cut(s) 559
BsiSI CCGG 3 cut(s) 560, 2586, 3820
BslFI GGGAC 2 cut(s) 1967, 2167
BslI CCNNNNNNNGG 8 cut(s) 282, 344, 659, 1840, 1950, 3498, 3707, 3881
BsmAI GTCTC 5 cut(s) 1334, 1529, 2104, 2715, 3554
BsmFI GGGAC 2 cut(s) 1967, 2167
BsmI GAATGC 4 cut(s) 71, 78, 1888, 2292
Bso31I GGTCTC 1 cut(s) 3554
BsoBI CYCGRG 1 cut(s) 559
Bsp1286I GDGCHC 4 cut(s) 838, 2410, 3019, 4133
Bsp19I CCATGG 1 cut(s) 2160
BspACI CCGC 3 cut(s) 425, 1178, 3687
BspCNI CTCAG 5 cut(s) 2024, 2116, 2257, 3488, 3494
BspDI ATCGAT 1 cut(s) 93
BspFNI CGCG 1 cut(s) 4297
BspHI TCATGA 2 cut(s) 1455, 3928
BspLI GGNNCC 6 cut(s) 520, 1641, 1749, 2052, 2117, 2584
BspMAI CTGCAG 2 cut(s) 1177, 2635
BspMI ACCTGC 1 cut(s) 251
BspOI GCTAGC 1 cut(s) 1707
BspPI GGATC 9 cut(s) 89, 571, 611, 784, 2110, 2123, 2172, 2339, 3959
BspTNI GGTCTC 1 cut(s) 3554
BsrDI GCAATG 7 cut(s) 126, 842, 993, 1127, 1714, 3333, 3486
BssECI CCNNGG 4 cut(s) 388, 559, 1684, 2160
BssNAI GTATAC 1 cut(s) 1739
BssNI GRCGYC 1 cut(s) 1770
BssSI CACGAG 1 cut(s) 3185
BssT1I CCWWGG 1 cut(s) 2160
Bst1107I GTATAC 1 cut(s) 1739
Bst2BI CACGAG 1 cut(s) 3185
Bst2UI CCWGG 5 cut(s) 389, 660, 1154, 1233, 1685
Bst6I CTCTTC 4 cut(s) 2700, 2891, 4071, 4080
BstACI GRCGYC 1 cut(s) 1770
BstAPI GCANNNNNTGC 4 cut(s) 992, 1073, 1373, 3122
BstBAI YACGTR 2 cut(s) 321, 2306
BstC8I GCNNGC 2 cut(s) 1705, 3298
BstDEI CTNAG 9 cut(s) 1196, 2011, 2103, 2244, 2270, 3059, 3282, 3475, 3481
BstDSI CCRYGG 1 cut(s) 2160
BstENI CCTNNNNNAGG 1 cut(s) 657
BstF5I GGATG 9 cut(s) 353, 520, 889, 1267, 2347, 2969, 3537, 3954, 4314
BstFNI CGCG 1 cut(s) 4297
BstH2I RGCGCY 1 cut(s) 3144
BstHHI GCGC 2 cut(s) 2292, 3143
BstMAI GTCTC 5 cut(s) 1334, 1529, 2104, 2715, 3554
BstNI CCWGG 5 cut(s) 389, 660, 1154, 1233, 1685
BstNSI RCATGY 2 cut(s) 1677, 3643
BstSCI CCNGG 8 cut(s) 387, 558, 559, 658, 1152, 1231, 1683, 2585
BstSFI CTRYAG 5 cut(s) 1173, 2631, 2863, 3145, 3876
BstSNI TACGTA 1 cut(s) 321
BstUI CGCG 1 cut(s) 4297
BstV2I GAAGAC 2 cut(s) 2426, 3917
BstX2I RGATCY 2 cut(s) 789, 2115
BstYI RGATCY 2 cut(s) 789, 2115
BstZ17I GTATAC 1 cut(s) 1739
Bsu15I ATCGAT 1 cut(s) 93
BsuI GTATCC 2 cut(s) 3048, 4158
BsuTUI ATCGAT 1 cut(s) 93
BtgI CCRYGG 1 cut(s) 2160
BtgZI GCGATG 1 cut(s) 1053
BtsCI GGATG 9 cut(s) 353, 520, 889, 1267, 2347, 2969, 3537, 3954, 4314
BtsI GCAGTG 1 cut(s) 2574
BveI ACCTGC 1 cut(s) 251
Cac8I GCNNGC 2 cut(s) 1705, 3298
CaiI CAGNNNCTG 1 cut(s) 1658
CciI TCATGA 2 cut(s) 1455, 3928
CfoI GCGC 2 cut(s) 2292, 3143
Cfr13I GGNCC 8 cut(s) 18, 385, 519, 1308, 1482, 1941, 2212, 4156
Cfr9I CCCGGG 1 cut(s) 559
ClaI ATCGAT 1 cut(s) 93
CseI GACGC 1 cut(s) 4130
Csp6I GTAC 4 cut(s) 1441, 1598, 3799, 3915
CspCI CAANNNNNGTGG 4 cut(s) 2254, 2289, 3027, 3062
CviQI GTAC 4 cut(s) 1441, 1598, 3799, 3915
DdeI CTNAG 9 cut(s) 1196, 2011, 2103, 2244, 2270, 3059, 3282, 3475, 3481
DraI TTTAAA 3 cut(s) 543, 1051, 3108
DrdI GACNNNNNNGTC 1 cut(s) 3734
DriI GACNNNNNGTC 1 cut(s) 1077
DseDI GACNNNNNNGTC 1 cut(s) 3734
EaeI YGGCCR 3 cut(s) 2278, 3179, 3817
Eam1104I CTCTTC 4 cut(s) 2700, 2891, 4071, 4080
Eam1105I GACNNNNNGTC 1 cut(s) 1077
EarI CTCTTC 4 cut(s) 2700, 2891, 4071, 4080
Ecl136II GAGCTC 1 cut(s) 2408
Eco105I TACGTA 1 cut(s) 321
Eco130I CCWWGG 1 cut(s) 2160
Eco24I GRGCYC 1 cut(s) 2410
Eco31I GGTCTC 1 cut(s) 3554
Eco32I GATATC 3 cut(s) 676, 688, 1170
Eco47I GGWCC 3 cut(s) 18, 1308, 2212
Eco53kI GAGCTC 1 cut(s) 2408
Eco57I CTGAAG 6 cut(s) 1727, 2346, 2664, 2840, 2958, 3572
Eco72I CACGTG 1 cut(s) 2306
Eco88I CYCGRG 1 cut(s) 559
EcoICRI GAGCTC 1 cut(s) 2408
EcoNI CCTNNNNNAGG 1 cut(s) 657
EcoO109I RGGNCCY 2 cut(s) 519, 2212
EcoRI GAATTC 1 cut(s) 2037
EcoRII CCWGG 5 cut(s) 387, 658, 1152, 1231, 1683
EcoRV GATATC 3 cut(s) 676, 688, 1170
EcoT14I CCWWGG 1 cut(s) 2160
EcoT22I ATGCAT 1 cut(s) 3645
EcoT38I GRGCYC 1 cut(s) 2410
ErhI CCWWGG 1 cut(s) 2160
FalI AAGNNNNNCTT 2 cut(s) 2172, 2204
FaqI GGGAC 2 cut(s) 1967, 2167
FauI CCCGC 1 cut(s) 3694
FauNDI CATATG 2 cut(s) 2095, 3544
FblI GTMKAC 3 cut(s) 1738, 2331, 2448
FokI GGATG 9 cut(s) 360, 527, 876, 1274, 2354, 2976, 3544, 3941, 4301
FriOI GRGCYC 1 cut(s) 2410
FspBI CTAG 8 cut(s) 83, 353, 897, 1137, 1704, 1724, 2613, 3399
GlaI GCGC 2 cut(s) 2291, 3142
GsaI CCCAGC 1 cut(s) 3129
GsuI CTGGAG 4 cut(s) 213, 1136, 3342, 4147
HaeII RGCGCY 1 cut(s) 3144
HapII CCGG 3 cut(s) 560, 2586, 3820
HgaI GACGC 1 cut(s) 4130
HhaI GCGC 2 cut(s) 2292, 3143
Hin1I GRCGYC 1 cut(s) 1770
Hin6I GCGC 2 cut(s) 2290, 3141
HinP1I GCGC 2 cut(s) 2290, 3141
HincII GTYRAC 3 cut(s) 2449, 3438, 4145
HindII GTYRAC 3 cut(s) 2449, 3438, 4145
HpaI GTTAAC 1 cut(s) 3438
HpaII CCGG 3 cut(s) 560, 2586, 3820
HphI GGTGA 5 cut(s) 626, 695, 1247, 1289, 1654
Hpy166II GTNNAC 8 cut(s) 375, 1246, 1311, 1739, 2332, 2449, 3438, 4145
Hpy8I GTNNAC 8 cut(s) 375, 1246, 1311, 1739, 2332, 2449, 3438, 4145
Hpy99I CGWCG 1 cut(s) 2522
HpyAV CCTTC 8 cut(s) 431, 587, 915, 1328, 1553, 2465, 3785, 4276
HpyCH4IV ACGT 8 cut(s) 221, 320, 1718, 1770, 2305, 3445, 3943, 3971
HpyF3I CTNAG 9 cut(s) 1196, 2011, 2103, 2244, 2270, 3059, 3282, 3475, 3481
HpySE526I ACGT 8 cut(s) 221, 320, 1718, 1770, 2305, 3445, 3943, 3971
Hsp92I GRCGYC 1 cut(s) 1770
HspAI GCGC 2 cut(s) 2290, 3141
KspAI GTTAAC 1 cut(s) 3438
LweI GCATC 8 cut(s) 194, 1030, 1252, 1819, 2067, 2353, 3379, 3496
MaeI CTAG 8 cut(s) 83, 353, 897, 1137, 1704, 1724, 2613, 3399
MaeII ACGT 8 cut(s) 221, 320, 1718, 1770, 2305, 3445, 3943, 3971
MfeI CAATTG 6 cut(s) 815, 866, 1322, 2690, 3609, 3694
MflI RGATCY 2 cut(s) 789, 2115
MhlI GDGCHC 4 cut(s) 838, 2410, 3019, 4133
MlsI TGGCCA 2 cut(s) 2280, 3181
MluNI TGGCCA 2 cut(s) 2280, 3181
MlyI GAGTC 6 cut(s) 1112, 1143, 1194, 1216, 2149, 2886
MmeI TCCRAC 3 cut(s) 1821, 3607, 3787
Mox20I TGGCCA 2 cut(s) 2280, 3181
Mph1103I ATGCAT 1 cut(s) 3645
MroXI GAANNNNTTC 4 cut(s) 507, 807, 2497, 3359
MscI TGGCCA 2 cut(s) 2280, 3181
MslI CAYNNNNRTG 1 cut(s) 751
Msp20I TGGCCA 2 cut(s) 2280, 3181
MspA1I CMGCKG 2 cut(s) 1178, 1658
MspI CCGG 3 cut(s) 560, 2586, 3820
MspR9I CCNGG 8 cut(s) 389, 560, 561, 660, 1154, 1233, 1685, 2587
MunI CAATTG 6 cut(s) 815, 866, 1322, 2690, 3609, 3694
Mva1269I GAATGC 4 cut(s) 71, 78, 1888, 2292
MvaI CCWGG 5 cut(s) 389, 660, 1154, 1233, 1685
MvnI CGCG 1 cut(s) 4297
NciI CCSGG 3 cut(s) 560, 561, 2587
NcoI CCATGG 1 cut(s) 2160
NdeI CATATG 2 cut(s) 2095, 3544
NheI GCTAGC 1 cut(s) 1703
NlaIV GGNNCC 6 cut(s) 520, 1641, 1749, 2052, 2117, 2584
NmuCI GTSAC 7 cut(s) 899, 1104, 1602, 1660, 1871, 3725, 4260
NsiI ATGCAT 1 cut(s) 3645
NspI RCATGY 2 cut(s) 1677, 3643
PagI TCATGA 2 cut(s) 1455, 3928
PciI ACATGT 1 cut(s) 1673
PctI GAATGC 4 cut(s) 71, 78, 1888, 2292
PdmI GAANNNNTTC 4 cut(s) 507, 807, 2497, 3359
PflFI GACNNNGTC 2 cut(s) 2555, 3283
PflMI CCANNNNNTGG 1 cut(s) 3498
PfoI TCCNGGA 1 cut(s) 2585
PleI GAGTC 6 cut(s) 1111, 1143, 1194, 1216, 2149, 2885
PmaCI CACGTG 1 cut(s) 2306
PmlI CACGTG 1 cut(s) 2306
PpsI GAGTC 6 cut(s) 1111, 1143, 1194, 1216, 2149, 2885
Ppu21I YACGTR 2 cut(s) 321, 2306
PpuMI RGGWCCY 1 cut(s) 2212
PscI ACATGT 1 cut(s) 1673
PshBI ATTAAT 3 cut(s) 767, 1959, 2825
Psp124BI GAGCTC 1 cut(s) 2410
Psp1406I AACGTT 2 cut(s) 221, 3971
Psp5II RGGWCCY 1 cut(s) 2212
Psp6I CCWGG 5 cut(s) 387, 658, 1152, 1231, 1683
PspCI CACGTG 1 cut(s) 2306
PspFI CCCAGC 1 cut(s) 3125
PspGI CCWGG 5 cut(s) 387, 658, 1152, 1231, 1683
PspN4I GGNNCC 6 cut(s) 520, 1641, 1749, 2052, 2117, 2584
PspPI GGNCC 8 cut(s) 18, 385, 519, 1308, 1482, 1941, 2212, 4156
PspPPI RGGWCCY 1 cut(s) 2212
PsrI GAACNNNNNNTAC 2 cut(s) 3153, 3185
PstI CTGCAG 2 cut(s) 1177, 2635
PstNI CAGNNNCTG 1 cut(s) 1658
PsuI RGATCY 2 cut(s) 789, 2115
PsyI GACNNNGTC 2 cut(s) 2555, 3283
PvuII CAGCTG 1 cut(s) 1658
RsaI GTAC 4 cut(s) 1442, 1599, 3800, 3916
RsaNI GTAC 4 cut(s) 1441, 1598, 3799, 3915
RseI CAYNNNNRTG 1 cut(s) 751
SacI GAGCTC 1 cut(s) 2410
SalI GTCGAC 1 cut(s) 2447
Sau96I GGNCC 8 cut(s) 18, 385, 519, 1308, 1482, 1941, 2212, 4156
ScaI AGTACT 1 cut(s) 1599
SchI GAGTC 6 cut(s) 1112, 1143, 1194, 1216, 2149, 2886
ScrFI CCNGG 8 cut(s) 389, 560, 561, 660, 1154, 1233, 1685, 2587
SduI GDGCHC 4 cut(s) 838, 2410, 3019, 4133
SfaNI GCATC 8 cut(s) 194, 1030, 1252, 1819, 2067, 2353, 3379, 3496
SfcI CTRYAG 5 cut(s) 1173, 2631, 2863, 3145, 3876
SinI GGWCC 3 cut(s) 18, 1308, 2212
SmaI CCCGGG 1 cut(s) 561
SmiMI CAYNNNNRTG 1 cut(s) 751
SmlI CTYRAG 4 cut(s) 794, 974, 2189, 4046
SmoI CTYRAG 4 cut(s) 794, 974, 2189, 4046
SnaBI TACGTA 1 cut(s) 321
SsiI CCGC 3 cut(s) 425, 1178, 3687
SspI AATATT 5 cut(s) 118, 855, 2143, 2221, 2475
SspMI CTAG 8 cut(s) 83, 353, 897, 1137, 1704, 1724, 2613, 3399
SstI GAGCTC 1 cut(s) 2410
StyD4I CCNGG 8 cut(s) 387, 558, 559, 658, 1152, 1231, 1683, 2585
StyI CCWWGG 1 cut(s) 2160
TaiI ACGT 8 cut(s) 224, 323, 1721, 1773, 2308, 3448, 3946, 3974
TaqI TCGA 6 cut(s) 93, 832, 2448, 2517, 2938, 3090
TatI WGTACW 1 cut(s) 1597
TseFI GTSAC 7 cut(s) 899, 1104, 1602, 1660, 1871, 3725, 4260
Tsp45I GTSAC 7 cut(s) 899, 1104, 1602, 1660, 1871, 3725, 4260
TspGWI ACGGA 1 cut(s) 882
TspMI CCCGGG 1 cut(s) 559
Tth111I GACNNNGTC 2 cut(s) 2555, 3283
Van91I CCANNNNNTGG 1 cut(s) 3498
VpaK11BI GGWCC 3 cut(s) 18, 1308, 2212
VspI ATTAAT 3 cut(s) 767, 1959, 2825
XagI CCTNNNNNAGG 1 cut(s) 657
XceI RCATGY 2 cut(s) 1677, 3643
XmaI CCCGGG 1 cut(s) 559
XmiI GTMKAC 3 cut(s) 1738, 2331, 2448
XmnI GAANNNNTTC 4 cut(s) 507, 807, 2497, 3359
XspI CTAG 8 cut(s) 83, 353, 897, 1137, 1704, 1724, 2613, 3399
ZraI GACGTC 1 cut(s) 1771
ZrmI AGTACT 1 cut(s) 1599
Zsp2I ATGCAT 1 cut(s) 3645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.