MD06G1099100.v1.1

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0002044
Physical Location & Seq
Reverse (-)
23536308 .. 23544020
7713 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1099100.v1.1.491

Sequence Viewer

Length: 4482 bp
ATGGCAGAGGTTTTCTGGACCTTCTTCTGCAACAGTTCCGATTGTTCGACTGAGTCTGGAGCTGATTGCACTTCGGGTTTTTTATCCATTATCGATCCAGACTCATGCATCAACAATATTTTGGTCATTGCAGTTGACATCTTACTTCTGTTTATATTGTTATGTTTCTTCATATATAGATTGTCATCAAATAAAATAGCACCATCTCAGTCTCACACCATCTCTGCATTGTCAATTGTCTCAGCCAGCCTTAATTCTGGTTTGGCTTTTGCCTGCTTGGGGTTTGGGATATGGACAATCGTCGACAAAGTAAATACCGATCAGACTGTTTTACCTCTCCATGGATGGCTAGTTTTGTTCTTTCAAGGGTTCACATGGTTCCTTCTGAGTTTAATCATAACCCTGAAAAAACCACTCTCTCCACAAATTGTCATCACGAAAATTGTTTCGATTCTTGCCTTCTTCTTTGCGGCTTTTCTTTGCAGTTCATCGATTTGGGAAGCTGTTGTGGATGAGGCAGTGTCATTTCAGTTTGTTGTAAACATTTTATATTTCCCCGGATCGATTCTCTTTCTCTTTACTGCATTTCAAGGAAGCAGTAATGTAAAACTTGATACAGAAATCCATGATGATGCTTTCTACACGCCTTTGCAAGGGGATGAATCGGACGTCAGAGGTGAAATCAGTTCAAATGACAACGTAACCCCTTTTGCAAAAGCAGGGTTATTCAGTACATTGTCATTTTGGTGGCTGAATCCACTGATGAAGAAAGGCAAGAAAAAGCTTCTTGAGAATGAAGATATTCCACAACTGCGAGAGGCTGATCGAGCAAGAACGTGCTACTCAATATTTATGGAGCAACTGGACAAACGGAGGAAGCAGAGTTTCGCATCAGATAACTCTTCCATTTTGTCCATAATTTTTTTATGCCAGAGGAAGGCTATTTTGATAACGGGGTTCTTTGCATTGATCAAGGTTCTAACCCTGAGTAGCGGCCCACTGTTTCTCATGGCCTTCATTGACGTTGCTGAAGGCAATGCAGCTTTTAAATATGAGGGTTATGCACTCACTCTAGGTCTCTTCATCTCAAAAATCTTGGAGTCACTATCAGAGAGGCAATGGAACTTTAGAACAAGATTGATTGGGCTCCAAGTAAGATCAGTGGTCTCTGCTGCAATATATCAGAAGCAACTAAGACTCTCGAATTCTGCCAAGATGACTCACTCTCCTGGTGAGATAGTGAATTATGTAGCGGTGGATGCTTATAAAGTTGGTGAATTTCCATACTGGTTTCATCAAATATGGTCCACAAGCCTTCAGATGTGCCTTGCATTACTTATTGTTTACTTCTGTGTCGGGCTGGCAATTGTTGCAGCCCTCATTGTACTTATATTGACTATGGTGGCAAGCTTTCCGTTGGCAAAGTTGCAGCACAAGTACCAAACAAAGCTCATGGCAGCACAAAATAGGAGGCTGAAGACCAGTACCGAAGCGCTTTCAAATATGAAGATCTTGAAGCTGTATTCTTGGGAGACAAATTTCAAGAATGTTATCGAAGGGTTAAGAAGAGAAGAATTGAAATGGTTAGCTCAAGTGATGTTTCAAAAGGGGTATTATAATGTTCTATTCTGGGCATCTCCTCTTTTGGTCTCCACAGTTACTTTTTGGGCATGCTACTTCCTCGGAATTACACTTTCTTCAAGTAATGTTTTCACACTTCTAGCAACATTGCGGATTGTTCAGGAGCCAATTAGGCTGTTCCCAGATGTTTTTGGAGCATTTATTGAAGCAAAGGTTTCATTATCTCGGATTGTGAAGTTCCTTGATGAACCAGAGTTGGAGAATAGACATACGAAAGATAGCAGTGGCAAAGAGGTTGAGCATTCCATTTTATGCAGATGTTCAGAAATTTCATGGTATACTAGTGCTACAAAGGCTACATTAAGGAACATAAATTTGGTGGTGAAACCGGGGGAAAAAGTAGCAATTTGTGGAGAGGTTGGCTCTGGTAAATCAACCCTGTTAGCTGCAATTCTCGGAGAAGTTCCACGCATTGGTGGCGTTGTTCAAGTATACGGGAAGATAGCATATGTTTCTCAGTCTGCATGGATCCAAACCGGAACTATACAAGAAAATATTCTGTTTGGTTCTGCCATGGACAATGTTAGATACCAAGAAACAGTTAGCAAGTGTTCTTTAGTGAAGGACTTTGAGATGCTTCCATTCCGCGATCTCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGTGGGCAGAAGCAGCGCATTCAACTTGCACGTGCACTCTATCAAAATGCTGATGTCTACCTCTTGGATGACCCTTTCAGTGCAGTTGATGCCCATACAGCGACAAGTCTATTCAATGAATATGTCATGGGAGCTCTAGCGGAGAAGACGGTTTTGCTTGTGACACACCAAGTCGACTTCCTTCCAGCTTTTAATTCGATATTGTTGATGAGTTCAGGGCAAATTTTAAGAGCAGCTCCTTATGAAGAGTTGCTGGCTTCTTGTCCTGAGTTCCAAGACCTCATTAATGCACACAATGACACTGCTGGTTCTAGAAGCCAAGTTGAATATGCTTCTACCGGAAAACATAAATTACCCAGGGAGGAGATTGAGAAATTTACCACCGAATTACCGTATGAAGAATCTTCAGGAGATCAATTGATTAAGCAAGAAGAGAGAGAAACAGGAGATACTGGTTTCAAGCCATACATCCAGTATTTGAAGCCGAGCAGGGGATTTTTCCATTTCTCCATGGCCATTGGCGTCCACTCCATTTTCATACTTGGGCAACTAGCTCAAGTTTATTGGTTGGCTTTAAAGCTGCAGGATTATAGCGTGTCAAGAGAAAAACTCTTCGGTGTTTATTCTGTGATCATGTGTCTAATGATACTCGCTTTGGTCATTCGAACTTTCTGTGTGGTCTACTTGGGATGTGGGGCATCAAACTCCATTTTTCAAACCCTGCTGAACTCTCTTTTCCGAGCACCAATGTTGTTTTATGACTCGACACCTTTGGGAAGGGTACTTAGTCGAGTATCCAATGATATGAATGTCATTGATCTTGAAGTACCTTTCAAGCTGATTATTGCAATTTCGGGAATTCTGAACACATATAGCATATTTTTAGTATTGGTTTTCCGTACTTGGCCCGTTGTGTTTCTGATTATTCCCACAATTTATATTACAATATTTTTACAGAATTACTACTTTGCTTCGGCCAAAGAGTTGATGCGAATGAATGGCACAACTAAGTCTGCCCTTGCAAGCCACCTTGCTGAATCTATCGCTGGAGCCTTGACAATCCGAGCTTTTGGACAGGAGGATCGGTTCTTGTCAAAAAATTTGAAACTTATTGATGCAAATGCTGCTACTGACTTCAATAGATTTTCTGCAAATGAATGGTTGATAGGAAGGCTTGAGCTGGTATGCGCTATCATTCTTTCAGCCTCAGCACTTGCCATTACTTTGATTCAGTTCGACACTTCTTCCACTGGATTTGTTGGCATGGTACTATCCTATGGTCTTTCATTGAATGTATTCGTCGTAATTGCTGTCCAATTTCAGTGCATGCTTGCAAATTCAATCATATCTGTTGAAAGGGTAGAACAATACATGCATATTCCTAGTGAAGCTCCGGAAGTAATAGAAGAGAACCGACCTATGCGCAATTGGCCTACTGTTGGCAAGGTGGAAATACATGATCTAAAGGTAAGATATAGGCCAAATGCTCCGCTAGTTCTTCGTGGGATAAATTGTACAATTGAAGGAGGTGACAAAATTGGTATTGTTGGCCGGACTGGAAGTGGGAAGACTACTCTTATTAGCATTTTGTTTCGTCTGGTAGAGCCTACAGAAGGAAAGGTCATAGTGGATGACTATGACATTTGCACAATTGGACTTCATGATTTAAGATCATGTTTTGGGATCATACCACAAGATCCGACTCTGTTCAGTGGATCTGTGAGATTCAATCTAGACCCCTTATCAGAGTATACCGATCATCAAATATGGGAAGTTCTTGAGAAATGTCAGTTGCGAGAGGCCGTTCAAGAAAAGGAAGACGGCCTTGATTCTTCAGTTGTACAAGATGGAACAAACTGGAGCATGGGACAACGACAACTATTCTGTTTGGGACGTGCTTTGTTGAAGAGGAGCCGAATACTGGTGCTCGATGAAGCCACTGCATCAATGGACAATACAACAGACGCTATTCTGCAGAAAACCATTAGAACAGAATTTGCAGACTGCACTGTAATAACCGTGGCTCATAGGATACCAACCGTGATGGACTGTACTAAAGTGCTTGCAATTAGTGATGGGAGACTGGTGGAGTATGATGAGCCAAAGAAGCTGATGAGGAATGAGGGATCACTATTTGGGCAGCTAGTCAAGGAATATTGGTCTCGTGCTGGTGCTGCTAATGCCGGCATCCGCTCAGAAGATAGAATCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1494

Amino Acids

166.99

Weight (kDa)

6.21

Isoelectric Point (pI)

34.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 3 - 200 1.4e-68 ABCC10 N-terminal domain
ABC_membrane PF00664 316 - 582 3.2e-23 ABC transporter transmembrane region
ABC_tran PF00005 648 - 782 5.7e-22 ABC transporter
ABC_membrane PF00664 939 - 1181 9.6e-27 ABC transporter transmembrane region
ABC_tran PF00005 1256 - 1404 1.4e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1266, 1617
AatII GACGTC 1 cut(s) 672
Acc16I TGCGCA 1 cut(s) 3692
AccB7I CCANNNNNTGG 1 cut(s) 2054
AccBSI CCGCTC 1 cut(s) 4461
AccI GTMKAC 7 cut(s) 303, 1919, 2073, 2325, 2442, 2949, 4019
AccII CGCG 1 cut(s) 2229
AccIII TCCGGA 1 cut(s) 3661
AciI CCGC 8 cut(s) 470, 993, 1253, 1732, 2227, 2408, 3758, 4459
AclWI GGATC 9 cut(s) 89, 568, 2104, 2117, 3357, 3959, 3959, 3991, 4402
AcoI YGGCCR 3 cut(s) 2781, 3243, 3817
AcuI CTGAAG 5 cut(s) 1050, 1301, 1496, 2658, 4086
AcvI CACGTG 1 cut(s) 2300
AcyI GRCGYC 2 cut(s) 669, 2790
AfeI AGCGCT 1 cut(s) 1494
AfiI CCNNNNNNNGG 9 cut(s) 279, 341, 653, 937, 2054, 2759, 3707, 3881, 4189
AhlI ACTAGT 1 cut(s) 1922
AjiI CACGTC 1 cut(s) 4163
AjnI CCWGG 2 cut(s) 1228, 2624
AjuI GAANNNNNNNTTGG 2 cut(s) 1940, 1972
AloI GAACNNNNNNTCC 2 cut(s) 3338, 3370
Alw21I GWGCWC 4 cut(s) 2305, 2404, 3013, 4197
Alw26I GTCTC 8 cut(s) 216, 244, 1082, 1171, 1526, 1654, 4342, 4434
Alw44I GTGCAC 1 cut(s) 2301
AlwI GGATC 9 cut(s) 89, 568, 2104, 2117, 3357, 3959, 3959, 3991, 4402
Aor13HI TCCGGA 1 cut(s) 3661
Aor51HI AGCGCT 1 cut(s) 1494
ApaLI GTGCAC 1 cut(s) 2301
AseI ATTAAT 1 cut(s) 2553
Asp700I GAANNNNTTC 3 cut(s) 801, 2136, 3563
AspLEI GCGC 4 cut(s) 1495, 2286, 3458, 3693
AspS9I GGNCC 4 cut(s) 18, 995, 1305, 3174
AsuC2I CCSGG 2 cut(s) 558, 1971
AsuHPI GGTGA 5 cut(s) 689, 1244, 1286, 1975, 3809
AsuII TTCGAA 1 cut(s) 2932
AvaII GGWCC 2 cut(s) 18, 1305
BaeGI GKGCMC 1 cut(s) 2305
BalI TGGCCA 1 cut(s) 2783
BamHI GGATCC 1 cut(s) 2109
BanII GRGCYC 2 cut(s) 1149, 2404
BauI CACGAG 1 cut(s) 4431
BbrPI CACGTG 1 cut(s) 2300
BbsI GAAGAC 4 cut(s) 1484, 2420, 3842, 4092
Bbv12I GWGCWC 4 cut(s) 2305, 2404, 3013, 4197
BbvCI CCTCAGC 1 cut(s) 3475
BccI CCATC 6 cut(s) 211, 227, 339, 4109, 4306, 4337
BceAI ACGGC 2 cut(s) 4055, 4105
BciT130I CCWGG 2 cut(s) 1230, 2626
BciVI GTATCC 2 cut(s) 3073, 4293
BclI TGATCA 2 cut(s) 969, 2898
BcnI CCSGG 2 cut(s) 558, 1971
BcoDI GTCTC 8 cut(s) 216, 244, 1082, 1171, 1526, 1654, 4342, 4434
BcuI ACTAGT 1 cut(s) 1922
BfmI CTRYAG 3 cut(s) 2849, 3876, 4241
BfoI RGCGCY 1 cut(s) 1496
BfuI GTATCC 2 cut(s) 3073, 4293
BglI GCCNNNNNGGC 1 cut(s) 1753
BglII AGATCT 1 cut(s) 1509
Bme1390I CCNGG 4 cut(s) 558, 1230, 1971, 2626
Bme18I GGWCC 2 cut(s) 18, 1305
BmgBI CACGTC 1 cut(s) 4163
BmgT120I GGNCC 4 cut(s) 18, 995, 1305, 3174
BmiI GGNNCC 6 cut(s) 380, 1148, 1746, 2111, 3319, 4181
BmrFI CCNGG 4 cut(s) 558, 1230, 1971, 2626
BoxI GACNNNNGTC 1 cut(s) 299
BpiI GAAGAC 4 cut(s) 1484, 2420, 3842, 4092
BplI GAGNNNNNCTC 4 cut(s) 1988, 2020, 2862, 2894
BpmI CTGGAG 3 cut(s) 78, 3336, 4147
Bpu10I CCTNAGC 1 cut(s) 3475
Bpu14I TTCGAA 1 cut(s) 2932
BpuEI CTTGAG 5 cut(s) 809, 1575, 2808, 3464, 4067
BpuMI CCSGG 2 cut(s) 558, 1971
Bsa29I ATCGAT 3 cut(s) 93, 491, 563
BsaAI YACGTR 1 cut(s) 2300
BsaBI GATNNNNATC 1 cut(s) 184
BsaHI GRCGYC 2 cut(s) 669, 2790
BsaI GGTCTC 4 cut(s) 1082, 1171, 1654, 4434
BsaJI CCNNGG 9 cut(s) 340, 556, 1681, 1970, 2154, 2624, 2625, 2778, 4287
BsaWI WCCGGW 3 cut(s) 2117, 2606, 3661
BsaXI ACNNNNNCTCC 4 cut(s) 1210, 1240, 3338, 3368
Bsc4I CCNNNNNNNGG 9 cut(s) 279, 341, 653, 937, 2054, 2759, 3707, 3881, 4189
Bse118I RCCGGY 1 cut(s) 4451
Bse3DI GCAATG 4 cut(s) 126, 1042, 1124, 1727
Bse8I GATNNNNATC 1 cut(s) 184
BseAI TCCGGA 1 cut(s) 3661
BseBI CCWGG 2 cut(s) 1230, 2626
BseCI ATCGAT 3 cut(s) 93, 491, 563
BseDI CCNNGG 9 cut(s) 340, 556, 1681, 1970, 2154, 2624, 2625, 2778, 4287
BseGI GGATG 9 cut(s) 350, 517, 664, 1264, 2341, 2736, 2963, 3904, 4455
BseJI GATNNNNATC 1 cut(s) 184
BseLI CCNNNNNNNGG 9 cut(s) 279, 341, 653, 937, 2054, 2759, 3707, 3881, 4189
BseMI GCAATG 4 cut(s) 126, 1042, 1124, 1727
BseRI GAGGAG 3 cut(s) 1629, 2645, 4192
BseSI GKGCMC 1 cut(s) 2305
BsgI GTGCAG 2 cut(s) 2370, 4258
Bsh1236I CGCG 1 cut(s) 2229
BshVI ATCGAT 3 cut(s) 93, 491, 563
BsiHKAI GWGCWC 4 cut(s) 2305, 2404, 3013, 4197
BsiSI CCGG 7 cut(s) 558, 1970, 2118, 2607, 3662, 3820, 4452
BslFI GGGAC 2 cut(s) 4149, 4173
BslI CCNNNNNNNGG 9 cut(s) 279, 341, 653, 937, 2054, 2759, 3707, 3881, 4189
BsmAI GTCTC 8 cut(s) 216, 244, 1082, 1171, 1526, 1654, 4342, 4434
BsmFI GGGAC 2 cut(s) 4149, 4173
BsmI GAATGC 2 cut(s) 1882, 2286
Bso31I GGTCTC 4 cut(s) 1082, 1171, 1654, 4434
Bsp119I TTCGAA 1 cut(s) 2932
Bsp1286I GDGCHC 5 cut(s) 1149, 2305, 2404, 3013, 4197
Bsp13I TCCGGA 1 cut(s) 3661
Bsp1407I TGTACA 2 cut(s) 3782, 4108
Bsp19I CCATGG 3 cut(s) 340, 2154, 2778
BspACI CCGC 8 cut(s) 470, 993, 1253, 1732, 2227, 2408, 3758, 4459
BspDI ATCGAT 3 cut(s) 93, 491, 563
BspEI TCCGGA 1 cut(s) 3661
BspFNI CGCG 1 cut(s) 2229
BspHI TCATGA 1 cut(s) 3928
BspLI GGNNCC 6 cut(s) 380, 1148, 1746, 2111, 3319, 4181
BspMAI CTGCAG 2 cut(s) 2853, 4245
BspPI GGATC 9 cut(s) 89, 568, 2104, 2117, 3357, 3959, 3959, 3991, 4402
BspT104I TTCGAA 1 cut(s) 2932
BspTNI GGTCTC 4 cut(s) 1082, 1171, 1654, 4434
BsrBI CCGCTC 1 cut(s) 4461
BsrDI GCAATG 4 cut(s) 126, 1042, 1124, 1727
BsrFI RCCGGY 1 cut(s) 4451
BsrGI TGTACA 2 cut(s) 3782, 4108
BssAI RCCGGY 1 cut(s) 4451
BssECI CCNNGG 9 cut(s) 340, 556, 1681, 1970, 2154, 2624, 2625, 2778, 4287
BssNAI GTATAC 3 cut(s) 1920, 2074, 4020
BssNI GRCGYC 2 cut(s) 669, 2790
BssSI CACGAG 1 cut(s) 4431
BssT1I CCWWGG 3 cut(s) 340, 2154, 2778
Bst1107I GTATAC 3 cut(s) 1920, 2074, 4020
Bst2BI CACGAG 1 cut(s) 4431
Bst2UI CCWGG 2 cut(s) 1230, 2626
Bst6I CTCTTC 8 cut(s) 907, 1085, 1561, 2508, 2694, 2885, 3669, 4169
BstACI GRCGYC 2 cut(s) 669, 2790
BstAPI GCANNNNNTGC 3 cut(s) 1370, 2357, 3392
BstAUI TGTACA 2 cut(s) 3782, 4108
BstBAI YACGTR 1 cut(s) 2300
BstBI TTCGAA 1 cut(s) 2932
BstDSI CCRYGG 4 cut(s) 340, 2154, 2778, 4287
BstENI CCTNNNNNAGG 2 cut(s) 651, 3879
BstF5I GGATG 9 cut(s) 350, 517, 664, 1264, 2341, 2736, 2963, 3904, 4455
BstFNI CGCG 1 cut(s) 2229
BstH2I RGCGCY 1 cut(s) 1496
BstHHI GCGC 4 cut(s) 1495, 2286, 3458, 3693
BstMAI GTCTC 8 cut(s) 216, 244, 1082, 1171, 1526, 1654, 4342, 4434
BstNI CCWGG 2 cut(s) 1230, 2626
BstNSI RCATGY 3 cut(s) 1674, 3598, 3643
BstPAI GACNNNNGTC 1 cut(s) 299
BstSCI CCNGG 4 cut(s) 556, 1228, 1969, 2624
BstSFI CTRYAG 3 cut(s) 2849, 3876, 4241
BstSLI GKGCMC 1 cut(s) 2305
BstUI CGCG 1 cut(s) 2229
BstV2I GAAGAC 4 cut(s) 1484, 2420, 3842, 4092
BstX2I RGATCY 4 cut(s) 1509, 2109, 3964, 3983
BstYI RGATCY 4 cut(s) 1509, 2109, 3964, 3983
BstZ17I GTATAC 3 cut(s) 1920, 2074, 4020
Bsu15I ATCGAT 3 cut(s) 93, 491, 563
BsuI GTATCC 2 cut(s) 3073, 4293
BsuTUI ATCGAT 3 cut(s) 93, 491, 563
BtgI CCRYGG 4 cut(s) 340, 2154, 2778, 4287
BtrI CACGTC 1 cut(s) 4163
BtsCI GGATG 9 cut(s) 350, 517, 664, 1264, 2341, 2736, 2963, 3904, 4455
BtsI GCAGTG 4 cut(s) 525, 1870, 2568, 4206
CciI TCATGA 1 cut(s) 3928
CfoI GCGC 4 cut(s) 1495, 2286, 3458, 3693
Cfr10I RCCGGY 1 cut(s) 4451
Cfr13I GGNCC 4 cut(s) 18, 995, 1305, 3174
ClaI ATCGAT 3 cut(s) 93, 491, 563
CseI GACGC 2 cut(s) 2779, 4241
CspCI CAANNNNNGTGG 4 cut(s) 2248, 2283, 3505, 3540
DraI TTTAAA 2 cut(s) 1048, 2844
EaeI YGGCCR 3 cut(s) 2781, 3243, 3817
Eam1104I CTCTTC 8 cut(s) 907, 1085, 1561, 2508, 2694, 2885, 3669, 4169
EarI CTCTTC 8 cut(s) 907, 1085, 1561, 2508, 2694, 2885, 3669, 4169
Ecl136II GAGCTC 1 cut(s) 2402
Eco130I CCWWGG 3 cut(s) 340, 2154, 2778
Eco24I GRGCYC 2 cut(s) 1149, 2404
Eco31I GGTCTC 4 cut(s) 1082, 1171, 1654, 4434
Eco47I GGWCC 2 cut(s) 18, 1305
Eco47III AGCGCT 1 cut(s) 1494
Eco53kI GAGCTC 1 cut(s) 2402
Eco57I CTGAAG 5 cut(s) 1050, 1301, 1496, 2658, 4086
Eco72I CACGTG 1 cut(s) 2300
EcoICRI GAGCTC 1 cut(s) 2402
EcoNI CCTNNNNNAGG 2 cut(s) 651, 3879
EcoRI GAATTC 2 cut(s) 1204, 3126
EcoRII CCWGG 2 cut(s) 1228, 2624
EcoT14I CCWWGG 3 cut(s) 340, 2154, 2778
EcoT22I ATGCAT 2 cut(s) 110, 3645
EcoT38I GRGCYC 2 cut(s) 1149, 2404
ErhI CCWWGG 3 cut(s) 340, 2154, 2778
FalI AAGNNNNNCTT 2 cut(s) 4077, 4109
FaqI GGGAC 2 cut(s) 4149, 4173
FauNDI CATATG 1 cut(s) 2089
FbaI TGATCA 2 cut(s) 969, 2898
FblI GTMKAC 7 cut(s) 303, 1919, 2073, 2325, 2442, 2949, 4019
FokI GGATG 9 cut(s) 357, 524, 671, 1271, 2348, 2723, 2970, 3911, 4442
FriOI GRGCYC 2 cut(s) 1149, 2404
FspI TGCGCA 1 cut(s) 3692
GlaI GCGC 4 cut(s) 1494, 2285, 3457, 3692
GsuI CTGGAG 3 cut(s) 78, 3336, 4147
HaeII RGCGCY 1 cut(s) 1496
HapII CCGG 7 cut(s) 558, 1970, 2118, 2607, 3662, 3820, 4452
HgaI GACGC 2 cut(s) 2779, 4241
HhaI GCGC 4 cut(s) 1495, 2286, 3458, 3693
Hin1I GRCGYC 2 cut(s) 669, 2790
Hin6I GCGC 4 cut(s) 1493, 2284, 3456, 3691
HinP1I GCGC 4 cut(s) 1493, 2284, 3456, 3691
HincII GTYRAC 3 cut(s) 136, 304, 2443
HindII GTYRAC 3 cut(s) 136, 304, 2443
HindIII AAGCTT 2 cut(s) 782, 1408
HpaII CCGG 7 cut(s) 558, 1970, 2118, 2607, 3662, 3820, 4452
HphI GGTGA 5 cut(s) 689, 1244, 1286, 1975, 3809
Hpy99I CGWCG 2 cut(s) 305, 3572
HpyCH4IV ACGT 6 cut(s) 669, 699, 836, 1023, 2299, 4162
HpySE526I ACGT 6 cut(s) 669, 699, 836, 1023, 2299, 4162
Hsp92I GRCGYC 2 cut(s) 669, 2790
HspAI GCGC 4 cut(s) 1493, 2284, 3456, 3691
Kpn2I TCCGGA 1 cut(s) 3661
KroI GCCGGC 1 cut(s) 4451
KroNI GCCGGC 1 cut(s) 4453
Ksp22I TGATCA 2 cut(s) 969, 2898
MaeII ACGT 6 cut(s) 669, 699, 836, 1023, 2299, 4162
MaeIII GTNAC 5 cut(s) 700, 1101, 1657, 2428, 3797
MbiI CCGCTC 1 cut(s) 4461
MfeI CAATTG 6 cut(s) 234, 1365, 2684, 3694, 3786, 3918
MflI RGATCY 4 cut(s) 1509, 2109, 3964, 3983
MhlI GDGCHC 5 cut(s) 1149, 2305, 2404, 3013, 4197
MlsI TGGCCA 1 cut(s) 2783
MluNI TGGCCA 1 cut(s) 2783
MlyI GAGTC 7 cut(s) 62, 95, 1109, 1191, 1213, 3023, 3964
MmeI TCCRAC 2 cut(s) 1818, 3992
Mox20I TGGCCA 1 cut(s) 2783
Mph1103I ATGCAT 2 cut(s) 110, 3645
MroI TCCGGA 1 cut(s) 3661
MroNI GCCGGC 1 cut(s) 4451
MroXI GAANNNNTTC 3 cut(s) 801, 2136, 3563
MscI TGGCCA 1 cut(s) 2783
MslI CAYNNNNRTG 2 cut(s) 630, 745
Msp20I TGGCCA 1 cut(s) 2783
MspI CCGG 7 cut(s) 558, 1970, 2118, 2607, 3662, 3820, 4452
MspR9I CCNGG 4 cut(s) 558, 1230, 1971, 2626
MunI CAATTG 6 cut(s) 234, 1365, 2684, 3694, 3786, 3918
Mva1269I GAATGC 2 cut(s) 1882, 2286
MvaI CCWGG 2 cut(s) 1230, 2626
MvnI CGCG 1 cut(s) 2229
NaeI GCCGGC 1 cut(s) 4453
NciI CCSGG 2 cut(s) 558, 1971
NcoI CCATGG 3 cut(s) 340, 2154, 2778
NdeI CATATG 1 cut(s) 2089
NgoMIV GCCGGC 1 cut(s) 4451
NlaIV GGNNCC 6 cut(s) 380, 1148, 1746, 2111, 3319, 4181
NmeAIII GCCGAG 1 cut(s) 2778
NmuCI GTSAC 3 cut(s) 1101, 2428, 3797
NsbI TGCGCA 1 cut(s) 3692
NsiI ATGCAT 2 cut(s) 110, 3645
NspI RCATGY 3 cut(s) 1674, 3598, 3643
NspV TTCGAA 1 cut(s) 2932
PaeI GCATGC 2 cut(s) 1674, 3598
PagI TCATGA 1 cut(s) 3928
PasI CCCWGGG 1 cut(s) 2625
PctI GAATGC 2 cut(s) 1882, 2286
PdiI GCCGGC 1 cut(s) 4453
PdmI GAANNNNTTC 3 cut(s) 801, 2136, 3563
PflFI GACNNNGTC 1 cut(s) 52
PflMI CCANNNNNTGG 1 cut(s) 2054
PleI GAGTC 7 cut(s) 61, 95, 1108, 1191, 1213, 3023, 3964
PmaCI CACGTG 1 cut(s) 2300
PmlI CACGTG 1 cut(s) 2300
PpsI GAGTC 7 cut(s) 61, 95, 1108, 1191, 1213, 3023, 3964
Ppu21I YACGTR 1 cut(s) 2300
PshAI GACNNNNGTC 1 cut(s) 299
PshBI ATTAAT 1 cut(s) 2553
PsiI TTATAA 2 cut(s) 1266, 1617
Psp124BI GAGCTC 1 cut(s) 2404
Psp6I CCWGG 2 cut(s) 1228, 2624
PspCI CACGTG 1 cut(s) 2300
PspGI CCWGG 2 cut(s) 1228, 2624
PspN4I GGNNCC 6 cut(s) 380, 1148, 1746, 2111, 3319, 4181
PspPI GGNCC 4 cut(s) 18, 995, 1305, 3174
PstI CTGCAG 2 cut(s) 2853, 4245
PsuI RGATCY 4 cut(s) 1509, 2109, 3964, 3983
PsyI GACNNNGTC 1 cut(s) 52
RseI CAYNNNNRTG 2 cut(s) 630, 745
SacI GAGCTC 1 cut(s) 2404
SalI GTCGAC 2 cut(s) 302, 2441
Sau96I GGNCC 4 cut(s) 18, 995, 1305, 3174
SchI GAGTC 7 cut(s) 62, 95, 1109, 1191, 1213, 3023, 3964
ScrFI CCNGG 4 cut(s) 558, 1230, 1971, 2626
SduI GDGCHC 5 cut(s) 1149, 2305, 2404, 3013, 4197
SfcI CTRYAG 3 cut(s) 2849, 3876, 4241
SfuI TTCGAA 1 cut(s) 2932
SinI GGWCC 2 cut(s) 18, 1305
SmiMI CAYNNNNRTG 2 cut(s) 630, 745
SmlI CTYRAG 5 cut(s) 788, 1590, 2823, 3443, 4046
SmoI CTYRAG 5 cut(s) 788, 1590, 2823, 3443, 4046
SpeI ACTAGT 1 cut(s) 1922
SphI GCATGC 2 cut(s) 1674, 3598
SsiI CCGC 8 cut(s) 470, 993, 1253, 1732, 2227, 2408, 3758, 4459
SspI AATATT 5 cut(s) 118, 849, 2137, 3216, 4424
SstI GAGCTC 1 cut(s) 2404
StyD4I CCNGG 4 cut(s) 556, 1228, 1969, 2624
StyI CCWWGG 3 cut(s) 340, 2154, 2778
TaiI ACGT 6 cut(s) 672, 702, 839, 1026, 2302, 4165
TatI WGTACW 5 cut(s) 731, 1384, 3782, 4108, 4319
TauI GCSGC 2 cut(s) 473, 996
TseFI GTSAC 3 cut(s) 1101, 2428, 3797
Tsp45I GTSAC 3 cut(s) 1101, 2428, 3797
TspGWI ACGGA 3 cut(s) 886, 1404, 3155
Tth111I GACNNNGTC 1 cut(s) 52
Van91I CCANNNNNTGG 1 cut(s) 2054
VneI GTGCAC 1 cut(s) 2301
VpaK11BI GGWCC 2 cut(s) 18, 1305
VspI ATTAAT 1 cut(s) 2553
XagI CCTNNNNNAGG 2 cut(s) 651, 3879
XbaI TCTAGA 2 cut(s) 2579, 4000
XceI RCATGY 3 cut(s) 1674, 3598, 3643
XcmI CCANNNNNNNNNTGG 1 cut(s) 4213
XmiI GTMKAC 7 cut(s) 303, 1919, 2073, 2325, 2442, 2949, 4019
XmnI GAANNNNTTC 3 cut(s) 801, 2136, 3563
ZraI GACGTC 1 cut(s) 670
Zsp2I ATGCAT 2 cut(s) 110, 3645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.