RLG00000004090

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0002044
Physical Location & Seq
Reverse (-)
56102683 .. 56109439
6757 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004090

Sequence Viewer

Length: 3990 bp
ATGGGGCAGACTTTCTGGACCTTATTCTGCACTAGTTCAGAGTGTTCAAATGAATCTGGAAATGAATGCAGTTCTAGCATTCTAGCCATTATCAATCCAAATTCATGTATCAACAATATTGTCGTCATTGCAGTTGATATTTTGGTCCTGCTCATCTTGTTATGTTTCCTTATGTATAGATTAGCATCAAAGAAGATTATAGCACCATCACAGCCTCACACCTTCACTCCAGTATCAGTTGTGTCAGTCAGTTTCAATGCTGGTTTGGCTTTGGCCTACTTGGGGTCTGGGATATGGACAATCATTGAGAAAGCCTTATCAGATCTGATTGTTTTAAACATTCTTTGTTTCCCTGGATCAATTCTCTTGCTTTTTAGTGCATTTGACGGAACCGATAATGCAAAAGGTGATCCAGAAGTCCATAATGGTGATGCTTTCTACACACCTTTGCTAGGTGCAGAACCAGATATCACAGGGTTCTTTGCACTTCTCAAGGTTCTCACAATGACTATCTCCCCACTGTTTCTCATAGCTTTCATCAAGGTTGTTGATGGCGATGCAGCTTTTAAATATGAGGTTTATGCACTGACTGCTGGTCTGTTCGTTGTGAAAATCGTGGAGTCGCTGTCAGAGAGGCAATGGTTCTTTAGAACTAGACTTATTGGACTCCAGGTACGATCGTTGATATCTGCAGAAGTTTATCAGAAGCAACTAAGACTCTCAAATGCTGCCAAGATGACTCATTCTCCTGGTGAGATAGTGAATTATGTAACGGTGGATGCTTATAGGATTGGTGAATTTCCATTCTGGTTTCATCAGATATGGTCCACAAACCTCCAATTGTGTCTCTCATTGATTATTATTTACTTCGCTGTTGGGGTAGCAACAGTTGCAGCTCTATCTGTTCTCATATTGACTGTGGTGGTAAGCTCTCCTTTGGCAAAGTTGCAGCACGAGTATCAAACAAAGTTCATGATTGCACAAAATAAGAGGCTGAAGGCCTTGACGGAAGCACTATCAAATATGAAGATCTTGAAGCTTTATTCTTGGGAGACAAATTTCAAGAAGGTCGTGGAAGGGTTTAGAGCAGAAGAACTCAAATGGATATCTAAAGTACTGTCACAAAAGGGTTATTGTAATGCTTTATTTTGGTCATCTCCTATTTTGGCAGCAGCTGTCACCTTTTGGACGTGCTATTTCCTTGGATTTACACTCTCTCCAACTAATGTTTTCACGTTTCTGGCAACTTTGCGTATTCTTCAGGAGCCAATAAGGCTAATCCCAGATGTTTTTGGAGCATTTATTGAAGCAAAGGTTTCCTTCTCTCGGATTGTGAAGTTCCTTGATGCACCAGAGTTGGAGAACAGACATACAAGGAAAAAGAGCTGTGGCAAGGAGGTTGGGCATTCCATTTTCATTAGAGCTTCAGAAATATCATGGGATACTAATTCTGCAAAGGCCACATTGAGGAACATTAATATAGTGGTTAATCGAGGAGAAAAAGTAGCTATTTGTGGAGAGGTTGGCTCAGGAAAATCAACTCTTTTAGCTGCAATTCTTGGAGAAGTTCCACGCATCACTGGCATCGTTCAAGTATATGGCACAATAGCATATGTTTCTCAGTCTGCTTGGATCGAAACAGGAACTATACAAGATAATATTCTGTTTGGGACTCCCATGGATCATGTTAGATACCAAGAAACTCTTGAGAAGTGTTCTCTTGTAAAGGACCTTGAGATTCTTCCATTCAGAGATCTCACTCAGATAGGAGAAAGAGGTGTCACTCTAAGTGGTGGCCAGAAACAGCGCATTCAACTTGCACGTGCATTGTATCAAAATGCGGATGTCTACCTCTTGGACGATCCATTCAGTGCAGTTGATGCCCATACTGCCACAAGCCTATTCAATGACTTTGTGATGGGTGCTCTGGCAGAGAAGACAGTGTTGCTTGTGACACACCAAGTCGACTTCCTTCCAACTTTGAATTCAATATTGTTGATGTCTTCAGGGAAGATTTCAAGAGCAGCTCCTTACGAAGAGCTGCTGGCTTCTTGTCAAGAGTTCCAAGAACTTGTCAATGCACACAATAAAACTGTTGGTTCCCAGAGGCAAGTTGAATATGCCTCCACTAGAAAACGTAAATCGTCTGCAGAGGAGATTGAGAATGTTAGAACTGATGTACAGCTAATAGAATTTTCGGGAGATCAATTGATTAAGAAAGAAGAGAGAGAAACAGGAGACTCTGGGTTCAAGCCATGCATTCAGTATTTGAAGCATGGCAAGGGATTTTTGCACTTCTCCTTATCTGGTGTTTTCTTGTTTCTATTCATAGCTGGGCAGTTACTTCAGAACTTTTGGTTGGCTTTGAATCTTCAGGATTACAGTGTTTCGAGAGTCAAACTCTTCACAGTTTACTCTGTGATCTTCTGCATTATGGCATTCTTTGTGCTTCTTCGATCTTTTAGGATAGTTGATTTAGGATGTGGAGCATCAGAATCCATTTTCTCCACACTACTCAATTCCCTTTTCCGAGCACCAATGCTGTTTTATGATTCAACACCTTTGGGGAGGATACTTAGTCGGGTATCTACTGATATGAATATCATCGACCTTGAAGTAGCATTAAAGTTAGCAGTAGCTGTTGGGGCAACTCTGAACACATTTAGCATATTTTTAGTCATGATTATTCTTACTTGGCCACTCGTGTTCCTGATTGTACCCACAGTTTATGTTACTTTTTGCTTCCAGAGTTACTACTTTGCATCGTCAAAAGAGTTAATGCGAATGAATGGCACAACTAAATCTGCACTTGCAAGCCACCTTTCAGAATCTATTGCTGGAGCAGTGACAATCAGAGCTTTTGGAGAAGAGGACAGATTCTTCTCCAAAAACTTAGAATTTATTGATGCAAATTCTGGCGCTGACTTCAATAGCTTTTCAACAAACGAGTGGTTGATTGAACGTCTAGAATTGCTATGCGCTATTGTGCTCTCAGCCTCAGCACTTGCCATTACTTGGATTCAGTCTGGTTCTTCTTCCTCTGGATTTATTGGGATGACACTATCATATGGCCTTTCACTAAATGTATTCCTAGTAATTTTTGTACAATTTCAGTGCATGCTAGCAAATTCAATCATTTCTGTAGAAAGGGTACAACAATACATGCACATTCCTAGCGAAGCCGCAGAAGTAATAGAAGACAACCGACCTGCACACAATTGGCCTATTGTTGGTAAAGTGGAAATACATGGCTTAGAGGTAAGATATAGGCCAAATTCTCCTTTGGTTCTTCGTGGGATAAATTGCATCATTGAAGGAGGCTACAAAATTGGAATTGTTGGCCGGACTGGAAGTGGAAAGACAACTCTTATCAGCGTTTTGTTTCGTGTGGTAGAGCCTACAAGAGGAAAGGTCATTGTAGATGGCTATGACATTTGCACAATTGGCCTTCATGATTTAAGATCACGTTTTGGGATTATCCCTCAAGATCCGACATTGTTTGGCGGGTCTGTGAGATTCAACCTCGATCCCTTAGCAGAGCATACTGATCATGAAATATGGGAGGTTCTTGAGAAATGTCAGCTACGAGAGGTCATTGGAGAGGAAGAAGGGGGCCTAGATTCTTTAGTTGTACAAGATGGAACAAACTGGAGCATGGGACAGCGACAACTATTCTGCTTGGGGCGTGCTTTATTGAAGAAAAGCCAAATACTAGTGCTTGATGAAGCCACAGCATCAATGGACAATGCAACAGACTCTACTCTCCAGAAAACTATAAGAACAGAATTTGCAGACTGCACTGTAATAACAGTGGCTCACAGGATACCCACAGTGATGGACTGCACTAAGGTGCTCGCTCTTAGTGATGGTAAAGTAGTAGAGTATGATGAGCCAATGAAGCTGATGAACAATGAGGGATCACTATTCGGGCAGCTTTTCAAGGAATACTGGTCTCGTTCTGCCAATGCTAGCATGCAGTCAGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1330

Amino Acids

147.66

Weight (kDa)

5.94

Isoelectric Point (pI)

34.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 4 - 105 2.4e-30 ABCC10 N-terminal domain
ABC_membrane PF00664 158 - 423 6.2e-27 ABC transporter transmembrane region
ABC_tran PF00005 489 - 623 2.9e-21 ABC transporter
ABC_membrane PF00664 768 - 1023 2.1e-27 ABC transporter transmembrane region
ABC_tran PF00005 1097 - 1245 1.1e-23 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3217
AccB7I CCANNNNNTGG 1 cut(s) 3015
AccI GTMKAC 2 cut(s) 1848, 1965
AciI CCGC 3 cut(s) 1841, 3183, 3504
AclWI GGATC 8 cut(s) 364, 404, 1640, 1689, 1856, 3482, 3521, 3925
AcoI YGGCCR 3 cut(s) 1795, 2696, 3340
AcuI CTGAAG 6 cut(s) 1016, 1244, 1410, 1989, 2330, 2357
AcvI CACGTG 1 cut(s) 1823
AfaI GTAC 7 cut(s) 675, 1116, 2181, 2718, 3105, 3153, 3633
AfiI CCNNNNNNNGG 7 cut(s) 282, 452, 1326, 1467, 3015, 3230, 3404
AhdI GACNNNNNGTC 1 cut(s) 594
AhlI ACTAGT 2 cut(s) 32, 3712
AjiI CACGTC 1 cut(s) 1191
AjnI CCWGG 3 cut(s) 352, 669, 748
AjuI GAANNNNNNNTTGG 4 cut(s) 1969, 2001, 2342, 2374
AleI CACNNNNGTG 1 cut(s) 3848
Alw21I GWGCWC 4 cut(s) 1927, 2536, 2991, 3855
Alw26I GTCTC 4 cut(s) 851, 1046, 2232, 3957
AlwI GGATC 8 cut(s) 364, 404, 1640, 1689, 1856, 3482, 3521, 3925
AlwNI CAGNNNCTG 2 cut(s) 1175, 2639
AseI ATTAAT 1 cut(s) 1476
AspLEI GCGC 3 cut(s) 1809, 2921, 2981
AspS9I GGNCC 5 cut(s) 18, 145, 825, 1729, 3613
AsuHPI GGTGA 5 cut(s) 419, 440, 764, 806, 1171
AsuNHI GCTAGC 2 cut(s) 3121, 3968
AvaII GGWCC 4 cut(s) 18, 145, 825, 1729
BaeI ACNNNNGTAYC 4 cut(s) 216, 249, 665, 698
BalI TGGCCA 2 cut(s) 1797, 2698
BauI CACGAG 2 cut(s) 953, 2702
BbrPI CACGTG 1 cut(s) 1823
BbsI GAAGAC 3 cut(s) 1943, 1995, 3204
Bbv12I GWGCWC 4 cut(s) 1927, 2536, 2991, 3855
BbvCI CCTCAGC 1 cut(s) 2998
BccI CCATC 7 cut(s) 214, 545, 1912, 3416, 3632, 3829, 3860
BciT130I CCWGG 3 cut(s) 354, 671, 750
BciVI GTATCC 3 cut(s) 1435, 2565, 3816
BclI TGATCA 1 cut(s) 3547
BcoDI GTCTC 4 cut(s) 851, 1046, 2232, 3957
BcuI ACTAGT 2 cut(s) 32, 3712
BfmI CTRYAG 3 cut(s) 690, 2148, 3141
BfoI RGCGCY 1 cut(s) 2922
BfuAI ACCTGC 1 cut(s) 3217
BfuI GTATCC 3 cut(s) 1435, 2565, 3816
BglI GCCNNNNNGGC 1 cut(s) 1273
BglII AGATCT 3 cut(s) 322, 1029, 1753
BmcAI AGTACT 1 cut(s) 1116
Bme1390I CCNGG 3 cut(s) 354, 671, 750
Bme18I GGWCC 4 cut(s) 18, 145, 825, 1729
BmeRI GACNNNNNGTC 1 cut(s) 594
BmgBI CACGTC 1 cut(s) 1191
BmgT120I GGNCC 5 cut(s) 18, 145, 825, 1729, 3613
BmiI GGNNCC 4 cut(s) 391, 1266, 2101, 3614
BmrFI CCNGG 3 cut(s) 354, 671, 750
BmtI GCTAGC 2 cut(s) 3125, 3972
BpiI GAAGAC 3 cut(s) 1943, 1995, 3204
BplI GAGNNNNNCTC 4 cut(s) 1511, 1543, 2385, 2417
BpmI CTGGAG 5 cut(s) 213, 653, 2859, 3670, 3749
Bpu10I CCTNAGC 3 cut(s) 1528, 2998, 3532
BpuEI CTTGAG 5 cut(s) 476, 1727, 1754, 3468, 3590
BsaAI YACGTR 1 cut(s) 1823
BsaBI GATNNNNATC 1 cut(s) 184
BsaI GGTCTC 1 cut(s) 3957
BsaJI CCNNGG 3 cut(s) 352, 1201, 1677
Bsc4I CCNNNNNNNGG 7 cut(s) 282, 452, 1326, 1467, 3015, 3230, 3404
Bse1I ACTGG 5 cut(s) 230, 1585, 3352, 3653, 3953
Bse3DI GCAATG 2 cut(s) 126, 644
Bse8I GATNNNNATC 1 cut(s) 184
BseBI CCWGG 3 cut(s) 354, 671, 750
BseDI CCNNGG 3 cut(s) 352, 1201, 1677
BseGI GGATG 4 cut(s) 784, 1849, 2486, 3060
BseJI GATNNNNATC 1 cut(s) 184
BseLI CCNNNNNNNGG 7 cut(s) 282, 452, 1326, 1467, 3015, 3230, 3404
BseMI GCAATG 2 cut(s) 126, 644
BseMII CTCAG 5 cut(s) 1542, 1634, 1775, 3006, 3012
BseNI ACTGG 5 cut(s) 230, 1585, 3352, 3653, 3953
BseRI GAGGAG 2 cut(s) 1509, 2168
BseYI CCCAGC 1 cut(s) 2333
BsgI GTGCAG 7 cut(s) 13, 477, 1893, 2790, 3195, 3781, 3826
Bsh1285I CGRYCG 1 cut(s) 680
BsiEI CGRYCG 1 cut(s) 680
BsiHKAI GWGCWC 4 cut(s) 1927, 2536, 2991, 3855
BsiSI CCGG 1 cut(s) 3343
BslFI GGGAC 2 cut(s) 1684, 3672
BslI CCNNNNNNNGG 7 cut(s) 282, 452, 1326, 1467, 3015, 3230, 3404
BsmAI GTCTC 4 cut(s) 851, 1046, 2232, 3957
BsmFI GGGAC 2 cut(s) 1684, 3672
BsmI GAATGC 6 cut(s) 71, 78, 1405, 1809, 2259, 2438
Bso31I GGTCTC 1 cut(s) 3957
Bsp1286I GDGCHC 4 cut(s) 1927, 2536, 2991, 3855
Bsp1407I TGTACA 3 cut(s) 2179, 3103, 3631
Bsp19I CCATGG 1 cut(s) 1677
BspACI CCGC 3 cut(s) 1841, 3183, 3504
BspCNI CTCAG 5 cut(s) 1541, 1633, 1774, 3005, 3011
BspHI TCATGA 4 cut(s) 972, 2679, 3451, 3550
BspLI GGNNCC 4 cut(s) 391, 1266, 2101, 3614
BspMAI CTGCAG 2 cut(s) 694, 2152
BspMI ACCTGC 1 cut(s) 3217
BspOI GCTAGC 2 cut(s) 3125, 3972
BspPI GGATC 8 cut(s) 364, 404, 1640, 1689, 1856, 3482, 3521, 3925
BspQI GCTCTTC 1 cut(s) 2031
BspTNI GGTCTC 1 cut(s) 3957
BsrDI GCAATG 2 cut(s) 126, 644
BsrGI TGTACA 3 cut(s) 2179, 3103, 3631
BsrI ACTGG 5 cut(s) 230, 1585, 3352, 3653, 3953
BssECI CCNNGG 3 cut(s) 352, 1201, 1677
BssSI CACGAG 2 cut(s) 953, 2702
BssT1I CCWWGG 2 cut(s) 1201, 1677
Bst2BI CACGAG 2 cut(s) 953, 2702
Bst2UI CCWGG 3 cut(s) 354, 671, 750
Bst6I CTCTTC 4 cut(s) 2031, 2217, 2408, 2862
BstAPI GCANNNNNTGC 3 cut(s) 590, 890, 1880
BstAUI TGTACA 3 cut(s) 2179, 3103, 3631
BstBAI YACGTR 1 cut(s) 1823
BstC8I GCNNGC 8 cut(s) 2046, 2815, 3119, 3123, 3687, 3855, 3970, 3974
BstDSI CCRYGG 1 cut(s) 1677
BstENI CCTNNNNNAGG 2 cut(s) 450, 3402
BstF5I GGATG 4 cut(s) 784, 1849, 2486, 3060
BstH2I RGCGCY 1 cut(s) 2922
BstHHI GCGC 3 cut(s) 1809, 2921, 2981
BstMAI GTCTC 4 cut(s) 851, 1046, 2232, 3957
BstMCI CGRYCG 1 cut(s) 680
BstNI CCWGG 3 cut(s) 354, 671, 750
BstNSI RCATGY 3 cut(s) 3121, 3166, 3976
BstSCI CCNGG 3 cut(s) 352, 669, 748
BstSFI CTRYAG 3 cut(s) 690, 2148, 3141
BstV2I GAAGAC 3 cut(s) 1943, 1995, 3204
BstX2I RGATCY 4 cut(s) 322, 1029, 1753, 3487
BstXI CCANNNNNNTGG 1 cut(s) 3835
BstYI RGATCY 4 cut(s) 322, 1029, 1753, 3487
BsuI GTATCC 3 cut(s) 1435, 2565, 3816
BtgI CCRYGG 1 cut(s) 1677
BtgZI GCGATG 1 cut(s) 570
BtrI CACGTC 1 cut(s) 1191
BtsCI GGATG 4 cut(s) 784, 1849, 2486, 3060
BtsI GCAGTG 1 cut(s) 2850
BveI ACCTGC 1 cut(s) 3217
Cac8I GCNNGC 8 cut(s) 2046, 2815, 3119, 3123, 3687, 3855, 3970, 3974
CaiI CAGNNNCTG 2 cut(s) 1175, 2639
CciI TCATGA 4 cut(s) 972, 2679, 3451, 3550
CfoI GCGC 3 cut(s) 1809, 2921, 2981
Cfr13I GGNCC 5 cut(s) 18, 145, 825, 1729, 3613
Csp6I GTAC 7 cut(s) 674, 1115, 2180, 2717, 3104, 3152, 3632
CviQI GTAC 7 cut(s) 674, 1115, 2180, 2717, 3104, 3152, 3632
DraI TTTAAA 2 cut(s) 336, 568
DriI GACNNNNNGTC 1 cut(s) 594
EaeI YGGCCR 3 cut(s) 1795, 2696, 3340
Eam1104I CTCTTC 4 cut(s) 2031, 2217, 2408, 2862
Eam1105I GACNNNNNGTC 1 cut(s) 594
EarI CTCTTC 4 cut(s) 2031, 2217, 2408, 2862
Eco130I CCWWGG 2 cut(s) 1201, 1677
Eco147I AGGCCT 1 cut(s) 1001
Eco31I GGTCTC 1 cut(s) 3957
Eco32I GATATC 3 cut(s) 469, 687, 1107
Eco47I GGWCC 4 cut(s) 18, 145, 825, 1729
Eco57I CTGAAG 6 cut(s) 1016, 1244, 1410, 1989, 2330, 2357
Eco72I CACGTG 1 cut(s) 1823
EcoNI CCTNNNNNAGG 2 cut(s) 450, 3402
EcoO109I RGGNCCY 2 cut(s) 1729, 3613
EcoRI GAATTC 1 cut(s) 1984
EcoRII CCWGG 3 cut(s) 352, 669, 748
EcoRV GATATC 3 cut(s) 469, 687, 1107
EcoT14I CCWWGG 2 cut(s) 1201, 1677
EcoT22I ATGCAT 1 cut(s) 2261
ErhI CCWWGG 2 cut(s) 1201, 1677
FalI AAGNNNNNCTT 6 cut(s) 919, 951, 1304, 1336, 1689, 1721
FaqI GGGAC 2 cut(s) 1684, 3672
FauI CCCGC 1 cut(s) 3497
FauNDI CATATG 2 cut(s) 1612, 3067
FbaI TGATCA 1 cut(s) 3547
FblI GTMKAC 2 cut(s) 1848, 1965
FokI GGATG 4 cut(s) 791, 1856, 2493, 3067
GlaI GCGC 3 cut(s) 1808, 2920, 2980
GsaI CCCAGC 1 cut(s) 2337
GsuI CTGGAG 5 cut(s) 213, 653, 2859, 3670, 3749
HaeII RGCGCY 1 cut(s) 2922
HapII CCGG 1 cut(s) 3343
HhaI GCGC 3 cut(s) 1809, 2921, 2981
Hin6I GCGC 3 cut(s) 1807, 2919, 2979
HinP1I GCGC 3 cut(s) 1807, 2919, 2979
HincII GTYRAC 1 cut(s) 1966
HindII GTYRAC 1 cut(s) 1966
HindIII AAGCTT 1 cut(s) 1037
HpaII CCGG 1 cut(s) 3343
HphI GGTGA 5 cut(s) 419, 440, 764, 806, 1171
Hpy166II GTNNAC 4 cut(s) 828, 1849, 1966, 2413
Hpy8I GTNNAC 4 cut(s) 828, 1849, 1966, 2413
HpyAV CCTTC 9 cut(s) 232, 991, 1060, 1070, 1330, 1982, 3308, 3458, 3602
HpyCH4IV ACGT 6 cut(s) 1190, 1235, 1822, 2137, 2962, 3466
HpySE526I ACGT 6 cut(s) 1190, 1235, 1822, 2137, 2962, 3466
HspAI GCGC 3 cut(s) 1807, 2919, 2979
Ksp22I TGATCA 1 cut(s) 3547
LguI GCTCTTC 1 cut(s) 2031
LmnI GCTCC 6 cut(s) 1264, 1295, 2032, 2486, 2840, 3651
MaeII ACGT 6 cut(s) 1190, 1235, 1822, 2137, 2962, 3466
MaeIII GTNAC 9 cut(s) 769, 1119, 1177, 1780, 1951, 2340, 2731, 2750, 2845
MfeI CAATTG 4 cut(s) 839, 2207, 3217, 3441
MflI RGATCY 4 cut(s) 322, 1029, 1753, 3487
MhlI GDGCHC 4 cut(s) 1927, 2536, 2991, 3855
MlsI TGGCCA 2 cut(s) 1797, 2698
MluNI TGGCCA 2 cut(s) 1797, 2698
MlyI GAGTC 8 cut(s) 629, 660, 711, 733, 1666, 2234, 2403, 3749
MmeI TCCRAC 4 cut(s) 1244, 1338, 2000, 3515
Mox20I TGGCCA 2 cut(s) 1797, 2698
Mph1103I ATGCAT 1 cut(s) 2261
MscI TGGCCA 2 cut(s) 1797, 2698
MseI TTAA 8 cut(s) 335, 567, 1476, 1488, 2214, 2624, 2777, 3458
MslI CAYNNNNRTG 3 cut(s) 426, 3833, 3848
Msp20I TGGCCA 2 cut(s) 1797, 2698
MspA1I CMGCKG 1 cut(s) 1175
MspI CCGG 1 cut(s) 3343
MspR9I CCNGG 3 cut(s) 354, 671, 750
MunI CAATTG 4 cut(s) 839, 2207, 3217, 3441
Mva1269I GAATGC 6 cut(s) 71, 78, 1405, 1809, 2259, 2438
MvaI CCWGG 3 cut(s) 354, 671, 750
NcoI CCATGG 1 cut(s) 1677
NdeI CATATG 2 cut(s) 1612, 3067
NheI GCTAGC 2 cut(s) 3121, 3968
NlaIV GGNNCC 4 cut(s) 391, 1266, 2101, 3614
NmuCI GTSAC 5 cut(s) 1119, 1177, 1780, 1951, 2845
NsiI ATGCAT 1 cut(s) 2261
NspI RCATGY 3 cut(s) 3121, 3166, 3976
OliI CACNNNNGTG 1 cut(s) 3848
PaeI GCATGC 2 cut(s) 3121, 3976
PagI TCATGA 4 cut(s) 972, 2679, 3451, 3550
PceI AGGCCT 1 cut(s) 1001
PciSI GCTCTTC 1 cut(s) 2031
PctI GAATGC 6 cut(s) 71, 78, 1405, 1809, 2259, 2438
PflMI CCANNNNNTGG 1 cut(s) 3015
Ple19I CGATCG 1 cut(s) 680
PleI GAGTC 8 cut(s) 628, 660, 711, 733, 1666, 2234, 2402, 3749
PmaCI CACGTG 1 cut(s) 1823
PmlI CACGTG 1 cut(s) 1823
PpsI GAGTC 8 cut(s) 628, 660, 711, 733, 1666, 2234, 2402, 3749
Ppu21I YACGTR 1 cut(s) 1823
PpuMI RGGWCCY 1 cut(s) 1729
PshBI ATTAAT 1 cut(s) 1476
Psp5II RGGWCCY 1 cut(s) 1729
Psp6I CCWGG 3 cut(s) 352, 669, 748
PspCI CACGTG 1 cut(s) 1823
PspFI CCCAGC 1 cut(s) 2333
PspGI CCWGG 3 cut(s) 352, 669, 748
PspN4I GGNNCC 4 cut(s) 391, 1266, 2101, 3614
PspPI GGNCC 5 cut(s) 18, 145, 825, 1729, 3613
PspPPI RGGWCCY 1 cut(s) 1729
PstI CTGCAG 2 cut(s) 694, 2152
PstNI CAGNNNCTG 2 cut(s) 1175, 2639
PsuI RGATCY 4 cut(s) 322, 1029, 1753, 3487
PvuI CGATCG 1 cut(s) 680
PvuII CAGCTG 1 cut(s) 1175
RsaI GTAC 7 cut(s) 675, 1116, 2181, 2718, 3105, 3153, 3633
RsaNI GTAC 7 cut(s) 674, 1115, 2180, 2717, 3104, 3152, 3632
RseI CAYNNNNRTG 3 cut(s) 426, 3833, 3848
SalI GTCGAC 1 cut(s) 1964
SapI GCTCTTC 1 cut(s) 2031
SaqAI TTAA 8 cut(s) 335, 567, 1476, 1488, 2214, 2624, 2777, 3458
Sau96I GGNCC 5 cut(s) 18, 145, 825, 1729, 3613
ScaI AGTACT 1 cut(s) 1116
SchI GAGTC 8 cut(s) 629, 660, 711, 733, 1666, 2234, 2403, 3749
ScrFI CCNGG 3 cut(s) 354, 671, 750
SduI GDGCHC 4 cut(s) 1927, 2536, 2991, 3855
SfcI CTRYAG 3 cut(s) 690, 2148, 3141
SinI GGWCC 4 cut(s) 18, 145, 825, 1729
SmiMI CAYNNNNRTG 3 cut(s) 426, 3833, 3848
SmlI CTYRAG 5 cut(s) 491, 1706, 1733, 3483, 3569
SmoI CTYRAG 5 cut(s) 491, 1706, 1733, 3483, 3569
SpeI ACTAGT 2 cut(s) 32, 3712
SphI GCATGC 2 cut(s) 3121, 3976
SseBI AGGCCT 1 cut(s) 1001
SsiI CCGC 3 cut(s) 1841, 3183, 3504
SspI AATATT 3 cut(s) 118, 1660, 1992
StuI AGGCCT 1 cut(s) 1001
StyD4I CCNGG 3 cut(s) 352, 669, 748
StyI CCWWGG 2 cut(s) 1201, 1677
TaiI ACGT 6 cut(s) 1193, 1238, 1825, 2140, 2965, 3469
TaqI TCGA 7 cut(s) 1492, 1635, 1965, 2390, 2455, 2607, 3525
TatI WGTACW 4 cut(s) 1114, 2179, 3103, 3631
TauI GCSGC 1 cut(s) 3185
Tru1I TTAA 8 cut(s) 335, 567, 1476, 1488, 2214, 2624, 2777, 3458
Tru9I TTAA 8 cut(s) 335, 567, 1476, 1488, 2214, 2624, 2777, 3458
TseFI GTSAC 5 cut(s) 1119, 1177, 1780, 1951, 2845
Tsp45I GTSAC 5 cut(s) 1119, 1177, 1780, 1951, 2845
TspGWI ACGGA 2 cut(s) 402, 1022
Van91I CCANNNNNTGG 1 cut(s) 3015
VpaK11BI GGWCC 4 cut(s) 18, 145, 825, 1729
VspI ATTAAT 1 cut(s) 1476
XagI CCTNNNNNAGG 2 cut(s) 450, 3402
XbaI TCTAGA 1 cut(s) 2965
XceI RCATGY 3 cut(s) 3121, 3166, 3976
XcmI CCANNNNNNNNNTGG 1 cut(s) 3736
XmiI GTMKAC 2 cut(s) 1848, 1965
ZrmI AGTACT 1 cut(s) 1116
Zsp2I ATGCAT 1 cut(s) 2261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.