MD06G1098900.v1.1

ABC transporter C family member 10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0002044
Physical Location & Seq
Reverse (-)
23489295 .. 23496168
6874 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1098900.v1.1.491

Sequence Viewer

Length: 4479 bp
ATGGAAGATGGTTTCTGGACCTCATTGATCTGCAGTAGTTTCAACTGTTCAACTGAGGCTGGAAATGACTGCAGTTCTAGCTTTTCAGCCATTAACAATCCAGATTCATGTATCAACAATATTTTGGTCATTGCAGCTGATATTTTGCTTCTGTTCATCTTGTTATGTATGTTCATATGCAAAATATCGTCAAAGAAGGTTATAGCGCCATCTCAGTCTCGAGCCTTCTCTCCAGTGTCCATAATCTCGGCTGCCTTTAATGCTGCTTTGGCTTTGGCCTACTTTGGTTTTGGGATCTGGACAATCTTCGAGAAAGTAAATGCAGAACAGACTGTTTTTCCCCTCCATGGATGCCTAGTTTTGCTGTTTCAAGGGTTCACATGGTTGCTTCTGGCTTTTACCATAAGCCTAAGCAACCCACAACCCCAACATATTGTGATAGCGAAGTCTTGTTCGATACTGGCCTTCTTAACTGCAGTTTTTCTTTGCAGTTCATCAATTGGAAAAGCTATTGTTGATGAGGAAGTATCGGTAAAGACTGTTTTAAACAAGCTTTATGTCCCTGGATCAATTCTTTTGCTATTTAGTGCTTTTCAGGGAAGCGATTGTTCGAAAGGCAATTCAGAAATCCACGATGATGCCTTCTACACACCTTTGCAAGGTGCAGAATCCAATATCATTGGTGAAATCAGTTCAAATGACAATTTGACTCCTTTCGCAAAAGCGGGGTTATTTAGCTCAATGTCATTTTGTTGGTTAAATCCATTAATGACGAAAGGTAAGCAAAAGATTCTGGAGAATGAAGATATTCCACAACTGCGAGAGGGTGATCAAGCACGAACGTGGTACTTAATATTTATGGAGCAAATGAACAAAAGGAAGGAAGGAGATCTGTCTGTTCAATCGTCTATCTTGCCCATTATTTTTCATTGCCAGAGGAAAGCTATTTTGATTTCGGGATTATTCGCGTTGATCAAGACTCTCACCACGACAACTAGTCCACTGTTTCTCATAGCCTTTATTAAGATTATTGAAGGCAATGCAGCTTTTAAGTATGAAGGTTATGCACTGACACTTGGTCTCTTCGTTGCGAAAATTGTGGAGTCACTGTCGGAGAGGCAATGGTTCTTTAAAACTAGATTGATAGGGCTCCAAGTGAGATCATTGGTATCAGCAGCAGTATATCAGAAGCAACTGCGACTCTCAAATTCTGCTAAGCTGACTCATTCTCCTGGTGAGATAGTGAATTATGTAACGGTGGATGCTTACAAAATTGGGGAGTTTCCATACTGGTTTCATCAGATATGGACCACAAGCCTTCAGATTTGCCTATCATTACTTATTGTTTACTTCTCTGTGGGGCTGGCGACTGCTGCAGCTCTAATTGTACTCATATTAACTGTGCTGGCAAGCTCGCCATTGGCGAAGTTGCAGCATGAGTATCAAACAGAGCTCATGACAGTGCAAAACAGGAGGCTGAAGGCCATTACGGAAGCACTTTCAAATATGAAGATTTTGAAGTTATATTCATGGGAGACAAATTTTAAGAATGTCATAGAAGGTTTACGAACGGAAGAACTAAAATTGATATATAAAGTGTTGTGGCAAAAGGGATATCATATAGCTCTATTTTGGGCATCTCCACTTTTGGTAGCAGCGGTTACATTTTGGACATGCTACTACCTTGGGATTACACTATCTCTTGGTAAGGTGTTCACATTTCTAGCAACTTTACGCCTTGTTCAGGAGCCAATTAGGTTGATTGCAAATGTTTTCGGGGCATTTATTGAAGCAAAGGTTTCATTTTCTCGGATTGTGAAGTTTCTTGATGCACCAGAGTTGGAGAATAGAACTACAAGGAAAAAGAGCTGCGGTACAGATGTTGAGCATTCTGTTTTCTTTAGATCTTCTGAAATTTCATGGGATTCTAGTAGTTCTACAAACGTTACATTAAAAAGCATCAATTTGGTGGTGAAAGCGGGAGAAAAAGTAGCAATTTGTGGAGAGGTTGGCTCAGGTAAATCAACCCTTTTAGCTGCAATTCTTGGAGAAGTTCCACATATCAACGGCATTGTTCAAGTATACGGGAAGATAGCGTATGTTTCTCAGTCTGCATGGATCCAAACAGGAACTATAAAAGAAAATATTCTGTTTGGGTCTTCCATGGATTGCGCTAGATACCAACAAACGCTTGAGAAGTGTTCCCTTGTGAAGGACCTTGAAATGCTTCCATTCCGTGATCTAACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGAGGGCAGAAGCAGCGTATTCAACTTGCACGGGCACTCTATCAAAATGCTGATGTCTACCTCTTGGATGACCCTTTCAGTGCAGTTGATGCCCATACGGCGACAAGCCTTTTCAATGAATATGTAATGGGAGCTCTGTCAGGGAAGACGGTTTTACTTGTGACGCACCAAGTAGACTTCCTTCCAGCTTTTAATTCGATTTTGTTGATGTCTTCGGGGAAAATTCTGAGAGCAGCTCCTTATGAAGAGTTGATGTCTTCTTGCCAAGAGTTCCAAGACCTTGTCCATGCACATCATGGCACTTCTGGTTGCGGGAGGCGAGTGGGATACACTTCTACTGGAAAACATAAATCATCCTCGGAGGAGATTGAGAAAGTTAAAAATGAGGAACAGAAAAAAGAATTTTCCGGTGATCAATTGATTAAGCAAGAAGAGAGGGAAACAGGAGACACCGGTTTCAAGCCATACATTCAGTATTTGAAACAACGCAAGGGATTTTTGTACTTCTCATCTTCAATCTTTTTTCATTTGATATTCATAGTTGGGCAACTAATCCAATCATATTGGTTGGCTTCCAAGCTTCAGGATTATAGCGTATCGAGAGTCAAACTCTTCACTGTTTATACAATAACCATGTGCATCATGTCATTTGCTTTGCTTCTTCGGTTCTTCGGTTTAGTTGGATTAGGATGTGGAGCATCAAAATCCATTTTCCACACACTACTCAACTCGCTTTTCCGAGCACCAATGCTCTTTTATGACTCGACACCAGTGGGAAGGATAATTAGTCGGGTCTCTAATGATATGAACGTCATCGACCTTGAATTAGCTTTCAAGTTGGGAATTTCTGTTGGTTCAACTTTGACTGCATACAGCATATATATAGTTATGGTTTCGATTACTTGGCCAATCGTGTTTCTGATTATACCCACGATTTATGTCACTCTACTACTTCAGAAATACAACTTTGCTTCTGCAAAAGAGTTGATGCGAATGAATGGCACGACTAAGTCTGCACTTGCAAGCCACCTTGCTGAATCTATTGCTGGAGCCTTGACAATCCGAGCTTTTGGAGAGGAGGATCGATTCTTCTCAAAAAACTTGGAATTTATCGATCTAAATGCTAGTGCCAACTTCAATAGCTTTTCAGCAAATGAGTGGTTGATCCAACGTCTTGAAATACTTTGTGCAATTGTTCTCTCAGCCTCGGCATTTGCCATTACTTTGATTCAGTTTGATGCTTCTTCTTCTGGTTTTATTGGGATGGCACTGTCATTTGGTCTGTCATTAAATGTATTCATCGTATTTTCGGTCCAAGTTCAATGCATGCTAGAGAACGCAATGATTTCGGTAGAAAGGGTAGAGCAATACATGAGTATTCCCAGTGAGGCTCCAGAAATAATCGAAGAAAACCGACCTGCGAACAATTGGCCAACTGTTGGTAAGGTGGAAATACATGATTTAAAGGTAAGATATAGGCCAAATGCTCCGCTAGTTCTTCGTGGGATAAACTGCGTGATTGAAGGAGGGGACAAAATTGGGATTGTTGGCCGGACTGGAGGCGGAAAGACAACTCTTATAAGCGTTTTGTTTCGTCTGGTAGAACCTACAGAAGGAAAGGTCATTGTGGATAACTATGACATTTGTAAAATTGGCCTTCATGATCTAAGATTACGTTTTGGGATCATACCACAAGATCCAACATTGTTTAGTGGATCTGTGAGATTCAATCTAGACCCGTTATCGAAGCATACTGATCACGAAATATGGGAGGTTCTTGAGAACTGTCAGTTACGCAAGGCCATTGAAGAAAAAGAAGAGGGCCTGGATTCTTTAATTGTACAAGATGGAACAAACTGGAGCATGGGACAGCGACAACTATTTTGTTTGGGTCGCGCTTTGTTGAAGAGGAGCCGGATACTAGTCCTCGATGAAGCTACTGCATCAATGGACAATACAACAGACTCTATTCTGCAGAAGACTATAAGAACAGAATTCGCAGACTGCACTGTGATAACCGTGGCTCATAGGATACCTACTGTGATGGACTGTACTAAAGTTCTTGCTATTAGTGACGGGAGATTAGTAGAGTATGATGAGCCACTGAACCTGATGAAACATGAGGGCTCACTATTTGGGCAGCTTGTCAAGGAATACTGGTCTCGCGCAGCGAATTCCAGCATTGTCTCAGACAATTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1493

Amino Acids

165.99

Weight (kDa)

7.08

Isoelectric Point (pI)

34.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 3 - 202 3.1e-70 ABCC10 N-terminal domain
ABC_membrane PF00664 316 - 584 5.3e-29 ABC transporter transmembrane region
ABC_tran PF00005 651 - 785 4.3e-22 ABC transporter
ABC_membrane PF00664 931 - 1184 1.1e-26 ABC transporter transmembrane region
ABC_tran PF00005 1259 - 1407 6.7e-23 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3857
Acc36I ACCTGC 1 cut(s) 3703
AccB7I CCANNNNNTGG 1 cut(s) 3716
AccI GTMKAC 3 cut(s) 2082, 2334, 2451
AccII CGCG 3 cut(s) 968, 4173, 4443
AciI CCGC 7 cut(s) 725, 1658, 1872, 1979, 2589, 3767, 3840
AclI AACGTT 1 cut(s) 1944
AclWI GGATC 9 cut(s) 302, 574, 2113, 2126, 3366, 3436, 3968, 3968, 4000
AcoI YGGCCR 3 cut(s) 3182, 3707, 3826
AcsI RAATTY 9 cut(s) 1207, 1540, 1914, 2499, 2678, 3120, 3383, 4271, 4450
AcuI CTGAAG 4 cut(s) 1304, 1499, 2843, 3215
AfaI GTAC 6 cut(s) 848, 1389, 1876, 2780, 4119, 4330
AfiI CCNNNNNNNGG 6 cut(s) 347, 659, 1744, 2212, 3716, 3890
AgeI ACCGGT 1 cut(s) 2729
AhdI GACNNNNNGTC 2 cut(s) 996, 1077
AhlI ACTAGT 2 cut(s) 995, 4198
AjnI CCWGG 3 cut(s) 562, 1231, 4101
AleI CACNNNNGTG 1 cut(s) 841
Alw21I GWGCWC 3 cut(s) 1455, 2413, 3022
Alw26I GTCTC 7 cut(s) 222, 1085, 1529, 2718, 3076, 4443, 4468
AlwI GGATC 9 cut(s) 302, 574, 2113, 2126, 3366, 3436, 3968, 3968, 4000
Ama87I CYCGRG 1 cut(s) 219
ApoI RAATTY 9 cut(s) 1207, 1540, 1914, 2499, 2678, 3120, 3383, 4271, 4450
ArsI GACNNNNNNTTYG 2 cut(s) 4143, 4175
AseI ATTAAT 1 cut(s) 767
AsiGI ACCGGT 1 cut(s) 2729
Asp700I GAANNNNTTC 3 cut(s) 807, 2145, 2226
AspLEI GCGC 4 cut(s) 208, 2174, 4175, 4445
AspS9I GGNCC 5 cut(s) 18, 1308, 2215, 3589, 4099
AsuHPI GGTGA 6 cut(s) 695, 839, 976, 1247, 1984, 2699
AsuII TTCGAA 1 cut(s) 611
AvaI CYCGRG 1 cut(s) 219
AvaII GGWCC 4 cut(s) 18, 1308, 2215, 3589
BaeGI GKGCMC 1 cut(s) 2314
BaeI ACNNNNGTAYC 2 cut(s) 1866, 1899
BalI TGGCCA 2 cut(s) 3184, 3709
BamHI GGATCC 1 cut(s) 2118
BanII GRGCYC 4 cut(s) 1152, 1455, 2413, 4406
BarI GAAGNNNNNNTAC 2 cut(s) 2442, 2474
BbsI GAAGAC 5 cut(s) 2151, 2429, 2481, 2526, 4262
Bbv12I GWGCWC 3 cut(s) 1455, 2413, 3022
BccI CCATC 5 cut(s) 2, 217, 3535, 4118, 4315
BceAI ACGGC 2 cut(s) 2083, 2391
BcgI CGANNNNNNTGC 4 cut(s) 3380, 3414, 3606, 3640
BciT130I CCWGG 3 cut(s) 564, 1233, 4103
BciVI GTATCC 3 cut(s) 2597, 4188, 4302
BclI TGATCA 4 cut(s) 829, 972, 2689, 4033
BcoDI GTCTC 7 cut(s) 222, 1085, 1529, 2718, 3076, 4443, 4468
BcuI ACTAGT 2 cut(s) 995, 4198
BfmI CTRYAG 6 cut(s) 31, 70, 474, 1374, 3885, 4250
BfoI RGCGCY 1 cut(s) 209
BfuAI ACCTGC 1 cut(s) 3703
BfuI GTATCC 3 cut(s) 2597, 4188, 4302
BglI GCCNNNNNGGC 1 cut(s) 2375
BglII AGATCT 2 cut(s) 889, 1904
BlpI GCTNAGC 1 cut(s) 1215
Bme1390I CCNGG 3 cut(s) 564, 1233, 4103
Bme18I GGWCC 4 cut(s) 18, 1308, 2215, 3589
BmeRI GACNNNNNGTC 2 cut(s) 996, 1077
BmeT110I CYCGRG 1 cut(s) 219
BmgT120I GGNCC 5 cut(s) 18, 1308, 2215, 3589, 4099
BmiI GGNNCC 6 cut(s) 1151, 1749, 2120, 3328, 3669, 4190
BmrFI CCNGG 3 cut(s) 564, 1233, 4103
BmrI ACTGGG 1 cut(s) 3654
BmuI ACTGGG 1 cut(s) 3654
BpiI GAAGAC 5 cut(s) 2151, 2429, 2481, 2526, 4262
BplI GAGNNNNNCTC 6 cut(s) 1997, 2029, 2497, 2529, 2871, 2903
BpmI CTGGAG 6 cut(s) 216, 815, 3345, 3654, 3855, 4156
Bpu10I CCTNAGC 2 cut(s) 410, 2014
Bpu1102I GCTNAGC 1 cut(s) 1215
Bpu14I TTCGAA 1 cut(s) 611
BpuEI CTTGAG 2 cut(s) 2213, 4076
Bsa29I ATCGAT 2 cut(s) 3361, 3390
BsaI GGTCTC 3 cut(s) 1085, 3076, 4443
BsaJI CCNNGG 7 cut(s) 346, 562, 1684, 2163, 2634, 3483, 4296
BsaWI WCCGGW 2 cut(s) 2684, 2729
BsaXI ACNNNNNCTCC 6 cut(s) 1094, 1124, 1213, 1243, 1974, 2004
Bsc4I CCNNNNNNNGG 6 cut(s) 347, 659, 1744, 2212, 3716, 3890
Bse118I RCCGGY 1 cut(s) 2729
Bse1I ACTGG 9 cut(s) 233, 465, 1295, 2620, 3047, 3660, 3838, 4139, 4439
Bse3DI GCAATG 5 cut(s) 129, 928, 1045, 1127, 3624
BseBI CCWGG 3 cut(s) 564, 1233, 4103
BseCI ATCGAT 2 cut(s) 3361, 3390
BseDI CCNNGG 7 cut(s) 346, 562, 1684, 2163, 2634, 3483, 4296
BseGI GGATG 6 cut(s) 356, 1267, 2350, 2630, 2972, 3546
BseLI CCNNNNNNNGG 6 cut(s) 347, 659, 1744, 2212, 3716, 3890
BseMI GCAATG 5 cut(s) 129, 928, 1045, 1127, 3624
BseMII CTCAG 8 cut(s) 45, 227, 2028, 2120, 2261, 2495, 3492, 4479
BseNI ACTGG 9 cut(s) 233, 465, 1295, 2620, 3047, 3660, 3838, 4139, 4439
BseRI GAGGAG 3 cut(s) 2654, 3368, 4201
BseSI GKGCMC 1 cut(s) 2314
BsgI GTGCAG 4 cut(s) 684, 2379, 3276, 4267
Bsh1236I CGCG 3 cut(s) 968, 4173, 4443
BshTI ACCGGT 1 cut(s) 2729
BshVI ATCGAT 2 cut(s) 3361, 3390
BsiHKAI GWGCWC 3 cut(s) 1455, 2413, 3022
BsiHKCI CYCGRG 1 cut(s) 219
BsiSI CCGG 4 cut(s) 2685, 2730, 3829, 4192
BslFI GGGAC 3 cut(s) 545, 3821, 4158
BslI CCNNNNNNNGG 6 cut(s) 347, 659, 1744, 2212, 3716, 3890
BsmAI GTCTC 7 cut(s) 222, 1085, 1529, 2718, 3076, 4443, 4468
BsmFI GGGAC 3 cut(s) 545, 3821, 4158
BsmI GAATGC 1 cut(s) 1888
Bso31I GGTCTC 3 cut(s) 1085, 3076, 4443
BsoBI CYCGRG 1 cut(s) 219
Bsp119I TTCGAA 1 cut(s) 611
Bsp1286I GDGCHC 6 cut(s) 1152, 1455, 2314, 2413, 3022, 4406
Bsp1407I TGTACA 1 cut(s) 4117
Bsp1720I GCTNAGC 1 cut(s) 1215
Bsp19I CCATGG 2 cut(s) 346, 2163
BspACI CCGC 7 cut(s) 725, 1658, 1872, 1979, 2589, 3767, 3840
BspCNI CTCAG 8 cut(s) 46, 226, 2027, 2119, 2260, 2496, 3491, 4478
BspDI ATCGAT 2 cut(s) 3361, 3390
BspFNI CGCG 3 cut(s) 968, 4173, 4443
BspHI TCATGA 2 cut(s) 1455, 3937
BspLI GGNNCC 6 cut(s) 1151, 1749, 2120, 3328, 3669, 4190
BspMAI CTGCAG 5 cut(s) 35, 74, 478, 1378, 4254
BspMI ACCTGC 1 cut(s) 3703
BspPI GGATC 9 cut(s) 302, 574, 2113, 2126, 3366, 3436, 3968, 3968, 4000
BspT104I TTCGAA 1 cut(s) 611
BspTNI GGTCTC 3 cut(s) 1085, 3076, 4443
BsrDI GCAATG 5 cut(s) 129, 928, 1045, 1127, 3624
BsrFI RCCGGY 1 cut(s) 2729
BsrGI TGTACA 1 cut(s) 4117
BsrI ACTGG 9 cut(s) 233, 465, 1295, 2620, 3047, 3660, 3838, 4139, 4439
BssAI RCCGGY 1 cut(s) 2729
BssECI CCNNGG 7 cut(s) 346, 562, 1684, 2163, 2634, 3483, 4296
BssNAI GTATAC 1 cut(s) 2083
BssT1I CCWWGG 3 cut(s) 346, 1684, 2163
Bst1107I GTATAC 1 cut(s) 2083
Bst2UI CCWGG 3 cut(s) 564, 1233, 4103
Bst6I CTCTTC 6 cut(s) 1088, 2517, 2703, 2894, 4089, 4178
BstAPI GCANNNNNTGC 1 cut(s) 2366
BstAUI TGTACA 1 cut(s) 4117
BstBI TTCGAA 1 cut(s) 611
BstC8I GCNNGC 6 cut(s) 1365, 1407, 1411, 1415, 3301, 3605
BstDSI CCRYGG 3 cut(s) 346, 2163, 4296
BstENI CCTNNNNNAGG 4 cut(s) 657, 1742, 2210, 3888
BstF5I GGATG 6 cut(s) 356, 1267, 2350, 2630, 2972, 3546
BstFNI CGCG 3 cut(s) 968, 4173, 4443
BstH2I RGCGCY 1 cut(s) 209
BstHHI GCGC 4 cut(s) 208, 2174, 4175, 4445
BstMAI GTCTC 7 cut(s) 222, 1085, 1529, 2718, 3076, 4443, 4468
BstMWI GCNNNNNNNGC 7 cut(s) 78, 260, 269, 1373, 2290, 2366, 2375
BstNI CCWGG 3 cut(s) 564, 1233, 4103
BstNSI RCATGY 2 cut(s) 1677, 3607
BstSCI CCNGG 3 cut(s) 562, 1231, 4101
BstSFI CTRYAG 6 cut(s) 31, 70, 474, 1374, 3885, 4250
BstSLI GKGCMC 1 cut(s) 2314
BstUI CGCG 3 cut(s) 968, 4173, 4443
BstV2I GAAGAC 5 cut(s) 2151, 2429, 2481, 2526, 4262
BstX2I RGATCY 6 cut(s) 294, 889, 1904, 2118, 3973, 3992
BstYI RGATCY 6 cut(s) 294, 889, 1904, 2118, 3973, 3992
BstZ17I GTATAC 1 cut(s) 2083
Bsu15I ATCGAT 2 cut(s) 3361, 3390
BsuI GTATCC 3 cut(s) 2597, 4188, 4302
BsuTUI ATCGAT 2 cut(s) 3361, 3390
BtgI CCRYGG 3 cut(s) 346, 2163, 4296
BtsCI GGATG 6 cut(s) 356, 1267, 2350, 2630, 2972, 3546
BveI ACCTGC 1 cut(s) 3703
Cac8I GCNNGC 6 cut(s) 1365, 1407, 1411, 1415, 3301, 3605
CciI TCATGA 2 cut(s) 1455, 3937
CfoI GCGC 4 cut(s) 208, 2174, 4175, 4445
Cfr10I RCCGGY 1 cut(s) 2729
Cfr13I GGNCC 5 cut(s) 18, 1308, 2215, 3589, 4099
ClaI ATCGAT 2 cut(s) 3361, 3390
CseI GACGC 1 cut(s) 2449
Csp6I GTAC 6 cut(s) 847, 1388, 1875, 2779, 4118, 4329
CspAI ACCGGT 1 cut(s) 2729
CspCI CAANNNNNGTGG 2 cut(s) 2257, 2292
CviQI GTAC 6 cut(s) 847, 1388, 1875, 2779, 4118, 4329
DraI TTTAAA 3 cut(s) 546, 1132, 3741
DriI GACNNNNNGTC 2 cut(s) 996, 1077
EaeI YGGCCR 3 cut(s) 3182, 3707, 3826
Eam1104I CTCTTC 6 cut(s) 1088, 2517, 2703, 2894, 4089, 4178
Eam1105I GACNNNNNGTC 2 cut(s) 996, 1077
EarI CTCTTC 6 cut(s) 1088, 2517, 2703, 2894, 4089, 4178
EciI GGCGGA 1 cut(s) 3855
Ecl136II GAGCTC 2 cut(s) 1453, 2411
Eco130I CCWWGG 3 cut(s) 346, 1684, 2163
Eco24I GRGCYC 4 cut(s) 1152, 1455, 2413, 4406
Eco31I GGTCTC 3 cut(s) 1085, 3076, 4443
Eco32I GATATC 1 cut(s) 1616
Eco47I GGWCC 4 cut(s) 18, 1308, 2215, 3589
Eco53kI GAGCTC 2 cut(s) 1453, 2411
Eco57I CTGAAG 4 cut(s) 1304, 1499, 2843, 3215
Eco88I CYCGRG 1 cut(s) 219
EcoICRI GAGCTC 2 cut(s) 1453, 2411
EcoNI CCTNNNNNAGG 4 cut(s) 657, 1742, 2210, 3888
EcoO109I RGGNCCY 2 cut(s) 2215, 4099
EcoRI GAATTC 2 cut(s) 4271, 4450
EcoRII CCWGG 3 cut(s) 562, 1231, 4101
EcoRV GATATC 1 cut(s) 1616
EcoT14I CCWWGG 3 cut(s) 346, 1684, 2163
EcoT22I ATGCAT 1 cut(s) 3605
EcoT38I GRGCYC 4 cut(s) 1152, 1455, 2413, 4406
ErhI CCWWGG 3 cut(s) 346, 1684, 2163
FaqI GGGAC 3 cut(s) 545, 3821, 4158
FauI CCCGC 3 cut(s) 718, 1972, 2582
FauNDI CATATG 1 cut(s) 176
FbaI TGATCA 4 cut(s) 829, 972, 2689, 4033
FblI GTMKAC 3 cut(s) 2082, 2334, 2451
FokI GGATG 6 cut(s) 363, 1274, 2357, 2617, 2979, 3553
FriOI GRGCYC 4 cut(s) 1152, 1455, 2413, 4406
GlaI GCGC 4 cut(s) 207, 2173, 4174, 4444
GsuI CTGGAG 6 cut(s) 216, 815, 3345, 3654, 3855, 4156
HaeII RGCGCY 1 cut(s) 209
HapII CCGG 4 cut(s) 2685, 2730, 3829, 4192
HgaI GACGC 1 cut(s) 2449
HhaI GCGC 4 cut(s) 208, 2174, 4175, 4445
Hin6I GCGC 4 cut(s) 206, 2172, 4173, 4443
HinP1I GCGC 4 cut(s) 206, 2172, 4173, 4443
HindIII AAGCTT 2 cut(s) 551, 2855
HpaII CCGG 4 cut(s) 2685, 2730, 3829, 4192
HphI GGTGA 6 cut(s) 695, 839, 976, 1247, 1984, 2699
Hpy166II GTNNAC 8 cut(s) 378, 1001, 1348, 1565, 1716, 2083, 2335, 2452
Hpy8I GTNNAC 8 cut(s) 378, 1001, 1348, 1565, 1716, 2083, 2335, 2452
HpyCH4IV ACGT 5 cut(s) 842, 1944, 3087, 3448, 3952
HpyF10VI GCNNNNNNNGC 7 cut(s) 78, 260, 269, 1373, 2290, 2366, 2375
HpySE526I ACGT 5 cut(s) 842, 1944, 3087, 3448, 3952
HspAI GCGC 4 cut(s) 206, 2172, 4173, 4443
Ksp22I TGATCA 4 cut(s) 829, 972, 2689, 4033
MaeII ACGT 5 cut(s) 842, 1944, 3087, 3448, 3952
MaeIII GTNAC 8 cut(s) 1104, 1252, 1660, 1945, 2437, 3217, 4068, 4349
MfeI CAATTG 5 cut(s) 498, 2693, 3468, 3703, 4471
MflI RGATCY 6 cut(s) 294, 889, 1904, 2118, 3973, 3992
MhlI GDGCHC 6 cut(s) 1152, 1455, 2314, 2413, 3022, 4406
MlsI TGGCCA 2 cut(s) 3184, 3709
MluNI TGGCCA 2 cut(s) 3184, 3709
MlyI GAGTC 8 cut(s) 703, 973, 1112, 1194, 1216, 2889, 3032, 4235
MmeI TCCRAC 5 cut(s) 1092, 1821, 2938, 3469, 4001
Mox20I TGGCCA 2 cut(s) 3184, 3709
Mph1103I ATGCAT 1 cut(s) 3605
MroXI GAANNNNTTC 3 cut(s) 807, 2145, 2226
MscI TGGCCA 2 cut(s) 3184, 3709
MslI CAYNNNNRTG 3 cut(s) 636, 841, 1460
Msp20I TGGCCA 2 cut(s) 3184, 3709
MspA1I CMGCKG 2 cut(s) 137, 1658
MspI CCGG 4 cut(s) 2685, 2730, 3829, 4192
MspR9I CCNGG 3 cut(s) 564, 1233, 4103
MunI CAATTG 5 cut(s) 498, 2693, 3468, 3703, 4471
Mva1269I GAATGC 1 cut(s) 1888
MvaI CCWGG 3 cut(s) 564, 1233, 4103
MvnI CGCG 3 cut(s) 968, 4173, 4443
MwoI GCNNNNNNNGC 7 cut(s) 78, 260, 269, 1373, 2290, 2366, 2375
NcoI CCATGG 2 cut(s) 346, 2163
NdeI CATATG 1 cut(s) 176
NlaIV GGNNCC 6 cut(s) 1151, 1749, 2120, 3328, 3669, 4190
NmeAIII GCCGAG 2 cut(s) 227, 3464
NmuCI GTSAC 4 cut(s) 1104, 2437, 3217, 4349
NsiI ATGCAT 1 cut(s) 3605
NspI RCATGY 2 cut(s) 1677, 3607
NspV TTCGAA 1 cut(s) 611
OliI CACNNNNGTG 1 cut(s) 841
PaeI GCATGC 1 cut(s) 3607
PaeR7I CTCGAG 1 cut(s) 219
PagI TCATGA 2 cut(s) 1455, 3937
PcsI WCGNNNNNNNCGW 1 cut(s) 1421
PctI GAATGC 1 cut(s) 1888
PdmI GAANNNNTTC 3 cut(s) 807, 2145, 2226
PfeI GAWTC 9 cut(s) 104, 668, 790, 1925, 3314, 3363, 3505, 4002, 4106
PflFI GACNNNGTC 2 cut(s) 2558, 3286
PflMI CCANNNNNTGG 1 cut(s) 3716
PinAI ACCGGT 1 cut(s) 2729
PleI GAGTC 8 cut(s) 703, 973, 1111, 1194, 1216, 2888, 3032, 4235
PpsI GAGTC 8 cut(s) 703, 973, 1111, 1194, 1216, 2888, 3032, 4235
PpuMI RGGWCCY 1 cut(s) 2215
PshBI ATTAAT 1 cut(s) 767
PsiI TTATAA 1 cut(s) 3857
Psp124BI GAGCTC 2 cut(s) 1455, 2413
Psp1406I AACGTT 1 cut(s) 1944
Psp5II RGGWCCY 1 cut(s) 2215
Psp6I CCWGG 3 cut(s) 562, 1231, 4101
PspGI CCWGG 3 cut(s) 562, 1231, 4101
PspN4I GGNNCC 6 cut(s) 1151, 1749, 2120, 3328, 3669, 4190
PspPI GGNCC 5 cut(s) 18, 1308, 2215, 3589, 4099
PspPPI RGGWCCY 1 cut(s) 2215
PstI CTGCAG 5 cut(s) 35, 74, 478, 1378, 4254
PsuI RGATCY 6 cut(s) 294, 889, 1904, 2118, 3973, 3992
PsyI GACNNNGTC 2 cut(s) 2558, 3286
PvuII CAGCTG 1 cut(s) 137
RsaI GTAC 6 cut(s) 848, 1389, 1876, 2780, 4119, 4330
RsaNI GTAC 6 cut(s) 847, 1388, 1875, 2779, 4118, 4329
RseI CAYNNNNRTG 3 cut(s) 636, 841, 1460
SacI GAGCTC 2 cut(s) 1455, 2413
Sau96I GGNCC 5 cut(s) 18, 1308, 2215, 3589, 4099
SchI GAGTC 8 cut(s) 703, 973, 1112, 1194, 1216, 2889, 3032, 4235
ScrFI CCNGG 3 cut(s) 564, 1233, 4103
SduI GDGCHC 6 cut(s) 1152, 1455, 2314, 2413, 3022, 4406
SfcI CTRYAG 6 cut(s) 31, 70, 474, 1374, 3885, 4250
Sfr274I CTCGAG 1 cut(s) 219
SfuI TTCGAA 1 cut(s) 611
SinI GGWCC 4 cut(s) 18, 1308, 2215, 3589
SlaI CTCGAG 1 cut(s) 219
SmiMI CAYNNNNRTG 3 cut(s) 636, 841, 1460
SmlI CTYRAG 3 cut(s) 219, 2192, 4055
SmoI CTYRAG 3 cut(s) 219, 2192, 4055
SpeI ACTAGT 2 cut(s) 995, 4198
SphI GCATGC 1 cut(s) 3607
SsiI CCGC 7 cut(s) 725, 1658, 1872, 1979, 2589, 3767, 3840
SspI AATATT 3 cut(s) 121, 855, 2146
SstI GAGCTC 2 cut(s) 1455, 2413
StyD4I CCNGG 3 cut(s) 562, 1231, 4101
StyI CCWWGG 3 cut(s) 346, 1684, 2163
TaiI ACGT 5 cut(s) 845, 1947, 3090, 3451, 3955
TaqII GACCGA 1 cut(s) 3577
TatI WGTACW 4 cut(s) 1387, 2778, 4117, 4328
TfiI GAWTC 9 cut(s) 104, 668, 790, 1925, 3314, 3363, 3505, 4002, 4106
TseFI GTSAC 4 cut(s) 1104, 2437, 3217, 4349
Tsp45I GTSAC 4 cut(s) 1104, 2437, 3217, 4349
TspGWI ACGGA 3 cut(s) 1505, 1586, 2225
Tth111I GACNNNGTC 2 cut(s) 2558, 3286
Van91I CCANNNNNTGG 1 cut(s) 3716
VpaK11BI GGWCC 4 cut(s) 18, 1308, 2215, 3589
VspI ATTAAT 1 cut(s) 767
XagI CCTNNNNNAGG 4 cut(s) 657, 1742, 2210, 3888
XapI RAATTY 9 cut(s) 1207, 1540, 1914, 2499, 2678, 3120, 3383, 4271, 4450
XbaI TCTAGA 1 cut(s) 4009
XceI RCATGY 2 cut(s) 1677, 3607
XcmI CCANNNNNNNNNTGG 1 cut(s) 2570
XhoI CTCGAG 1 cut(s) 219
XmiI GTMKAC 3 cut(s) 2082, 2334, 2451
XmnI GAANNNNTTC 3 cut(s) 807, 2145, 2226
Zsp2I ATGCAT 1 cut(s) 3605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.