Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0001985

Physical Location & Seq

Genomic Coordinates Forward (+)

5358377 .. 5361338

Gene Structure 2962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g09300.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGCTGCCGAGGCTGAACGTTGGTATTTGGATGGAGGACAGGGAGGAGAGAGACGCCGGAGACTGGGCCAGAACCGCCGGAGCCGGCGCCGGGAGCAGCAAGGACGAGATGGGTTCATTGTCGAATTTCAAATCCATGCTGGAGGTTGAAGATGAGTGGTACTTGAACAACAACAACAATGGCATTCAGGGCCATTCTGACGTCGTCAGAGATTTGACGTTCTCACCCAGCTTTGCTGACCCAGAAAGCTTGCTGCTGAACCAGGTTGACTCTTCATCTTCTTGCTCTCCATCTTCCTCTGTTTTCAACAACCTCGACCCGTCTCAGGTTCAGTACTACTTGCATCAAAACCCATCTCTGTCTTCTCTGCTCAATGCTGTGCCCAACAACAACAACAATCCATTAGACCATGGCTTTGATTTGGGCTGTGAGATTGGGTTTCTTGACAACCAAGGCTCGAGTTTGATGAACAGGGGAGGTGGGGTTTTAACCGGGTTCAATGATTTGAGCTCCAATACCCACATGCAGCCTCAGAATATTTGCTCCAATTTGCAATTCACAGCAACCCGTTTGCCTCATTTGCTTGAGAATAGTACTAACTTTTCGGGTTTGCGGGGTGTTGATGATGCTTCAGGGAATGGTTTGTTTAACAACAGGTCTAAAATGTTGAGGCCACTTCAGCCCTTGTCTTCTGTGGGAGCACAGCCCACTCTATTTCAGAAAAGAGCAGCCAAGAATTTGGTTGGGAATGGAGGCAATTTGAGTGGTTTGGGGTCTGAAGGGGGACTGGTCTTGAGTAACTATGAGGGGGGTAAGGGGAAGAGGGACATGGGTGAGGAGAATGAGAAGAAGAGGAAGTTTAGTGGTGGAGATGATGGTGAGGATTTGAGTTTGGATGGCTCGGGTTTGAATTATGATTCAGATGAGTTTACTGAGAATAATAAGGTGGATGAGAATGGTAAGAATGTTGGGAATAGCTCCAATGCTAATAGTACCGTCACTGGTGGAGAGCACAAGGGGAAGAAGAAAGGGTTGCCTGCTAAGAACCTGATGGCTGAGAGGCGCCGCCGCAAGAAGCTCAATGACCGGCTGTATATGCTGAGATCCGTGGTTCCAAAGATTAGCAAAATGGATAGGGCTTCTATCCTTGGGGATGCAATTGAGTACCTGAAGGAACTTCTGCAGAGGATCAACAACCTCCATAACGAGTTGGAGTCGCTCCCTCCTGGGTCTGCATTGACACCTACCGCGAGTACTTTCCACCCTTTGACACCCACTCCGCCTACTCTGCCAAGCCGTATTAAGGAAGAACTTTGCCCCAGCTTACCTAGCCCAAATGGCCAACCTGCAAGGGTTGAAGTAAGGCTACGAGAAGGAAGAGCTGTGAACATCCACATGTTCTGTGGCAGAAGACCTGGTCTGTTGCTCTCCACTATGAGGGCTGTAGATAATCTTGGTCTAGATATCCAGCAAGCTGTCATTAGCTGCTTCAATGGGTTTGCCATGGATATATTCCGAGCTGAGCAATGCAAGGAAGGCCAAGACGTCCACCCCGAGCATATAAAGGCAGTACTATTGGATTCAGCTGGCTTCCATGGCATGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

536

Amino Acids

58.21

Weight (kDa)

5.81

Isoelectric Point (pI)

44.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH_SAC51	PF23173	350 - 399	2.1e-07	Transcription factor SAC51 bHLH domain
HLH	PF00010	351 - 393	2.1e-09	Helix-loop-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12860 AT1G12860 AT1G12860 AT3G26744 AT3G26744 AT3G26744 AT3G26744 AT3G26744
fragaria_vesca	FvH4_5g09300 FvH4_5g09300
malus_domestica	MD06G1132200.v1.1 MD09G1003800.v1.1 MD14G1148600.v1.1 MD17G1007400.v1.1
prunus_persica	Prupe.3G312800_v2.0.a1 Prupe.3G312800_v2.0.a1 Prupe.5G143200_v2.0.a1
pyrus_communis	pycom06g12380 pycom111g00280 pycom14g12340 pycom17g00300
rosa_chinensis	RchiOBHm_Chr2g0176421 RchiOBHm_Chr7g0188921
rosa_laevigata	RLG00000004651 RLG00000022412
rosa_multiflora	Rmu_co8326225.1_g000001 Rmu_co8487291.1_g000001 Rmu_sc0009140.1_g000010 Rmu_sc0011904.1_g000015 Rmu_ssc0000113.1_g000008
rosa_roxburghii	Rroxscaffold_2G00076450 Rroxscaffold_3G00265940
rosa_rugosa	Rorug02G0594200 Rorug02G0594200 Rorug06G0494600
rosa_samantha	Rh2AG672700 Rh2BG684200 Rh2CG647000 Rh2DG697800 Rh7AG099500 Rh7BG101600 Rh7CG102900 Rh7DG101300
rosa_wichuraiana	Rw2G055180 Rw7G008570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	204, 1548
Acc36I	ACCTGC	1 cut(s)	1354
AccB1I	GGYRCC	2 cut(s)	86, 1062
AccII	CGCG	1 cut(s)	1250
AciI	CCGC	6 cut(s)	75, 613, 1066, 1069, 1248, 1280
AclI	AACGTT	1 cut(s)	18
AclWI	GGATC	2 cut(s)	1098, 1196
AcoI	YGGCCR	1 cut(s)	1339
AcsI	RAATTY	2 cut(s)	124, 736
AcuI	CTGAAG	4 cut(s)	615, 662, 798, 1190
AcyI	GRCGYC	5 cut(s)	54, 87, 201, 1063, 1545
AfaI	GTAC	7 cut(s)	161, 335, 595, 994, 1166, 1255, 1572
AfiI	CCNNNNNNNGG	5 cut(s)	63, 90, 325, 1303, 1437
AflIII	ACRYGT	1 cut(s)	1395
AgsI	TTSAA	8 cut(s)	130, 149, 166, 307, 499, 910, 1358, 1492
AjnI	CCWGG	3 cut(s)	261, 1225, 1414
AjuI	GAANNNNNNNTTGG	2 cut(s)	539, 571
Alw21I	GWGCWC	3 cut(s)	512, 703, 1014
Alw26I	GTCTC	3 cut(s)	45, 54, 327
AlwI	GGATC	2 cut(s)	1098, 1196
Ama87I	CYCGRG	3 cut(s)	457, 901, 1553
AoxI	GGCC	5 cut(s)	66, 190, 671, 1339, 1537
ApeKI	GCWGC	6 cut(s)	4, 96, 253, 526, 728, 1485
ApoI	RAATTY	2 cut(s)	124, 736
ArsI	GACNNNNNNTTYG	2 cut(s)	398, 430
AspLEI	GCGC	2 cut(s)	89, 1065
AspS9I	GGNCC	2 cut(s)	66, 190
AsuC2I	CCSGG	2 cut(s)	91, 493
AsuHPI	GGTGA	3 cut(s)	216, 845, 890
AvaI	CYCGRG	3 cut(s)	457, 901, 1553
BaeGI	GKGCMC	1 cut(s)	384
BalI	TGGCCA	1 cut(s)	1341
BanI	GGYRCC	2 cut(s)	86, 1062
BanII	GRGCYC	1 cut(s)	512
BarI	GAAGNNNNNNTAC	2 cut(s)	1350, 1382
BbsI	GAAGAC	3 cut(s)	354, 681, 1417
Bbv12I	GWGCWC	3 cut(s)	512, 703, 1014
BbvI	GCAGC	5 cut(s)	108, 240, 538, 740, 1472
BccI	CCATC	7 cut(s)	25, 103, 298, 361, 869, 890, 1045
BceAI	ACGGC	1 cut(s)	1281
BciT130I	CCWGG	3 cut(s)	263, 1227, 1416
BcnI	CCSGG	2 cut(s)	91, 493
BcoDI	GTCTC	3 cut(s)	45, 54, 327
BfaI	CTAG	2 cut(s)	1329, 1460
BfmI	CTRYAG	2 cut(s)	1181, 1443
BfoI	RGCGCY	2 cut(s)	90, 1066
BfuAI	ACCTGC	1 cut(s)	1354
BglI	GCCNNNNNGGC	1 cut(s)	1338
BisI	GCNGC	8 cut(s)	5, 97, 254, 527, 729, 1066, 1069, 1486
BlpI	GCTNAGC	1 cut(s)	1521
BlsI	GCNGC	8 cut(s)	6, 98, 255, 528, 730, 1067, 1070, 1487
BmcAI	AGTACT	4 cut(s)	335, 595, 1255, 1572
Bme1390I	CCNGG	5 cut(s)	91, 263, 493, 1227, 1416
BmeT110I	CYCGRG	3 cut(s)	457, 901, 1553
BmgT120I	GGNCC	2 cut(s)	66, 190
BmiI	GGNNCC	4 cut(s)	82, 88, 1064, 1113
BmrFI	CCNGG	5 cut(s)	91, 263, 493, 1227, 1416
BmrI	ACTGGG	1 cut(s)	73
BmsI	GCATC	3 cut(s)	352, 616, 1144
BmuI	ACTGGG	1 cut(s)	73
BpiI	GAAGAC	3 cut(s)	354, 681, 1417
BpmI	CTGGAG	1 cut(s)	161
Bpu1102I	GCTNAGC	1 cut(s)	1521
BpuEI	CTTGAG	2 cut(s)	605, 814
BpuMI	CCSGG	2 cut(s)	91, 493
BsaHI	GRCGYC	5 cut(s)	54, 87, 201, 1063, 1545
BsaJI	CCNNGG	8 cut(s)	8, 409, 451, 1107, 1147, 1226, 1503, 1594
BsaXI	ACNNNNNCTCC	4 cut(s)	468, 498, 1261, 1291
Bsc4I	CCNNNNNNNGG	5 cut(s)	63, 90, 325, 1303, 1437
Bse118I	RCCGGY	2 cut(s)	83, 1086
Bse1I	ACTGG	3 cut(s)	68, 792, 1006
Bse3DI	GCAATG	1 cut(s)	1532
BseBI	CCWGG	3 cut(s)	263, 1227, 1416
BseDI	CCNNGG	8 cut(s)	8, 409, 451, 1107, 1147, 1226, 1503, 1594
BseGI	GGATG	5 cut(s)	36, 901, 955, 1159, 1389
BseLI	CCNNNNNNNGG	5 cut(s)	63, 90, 325, 1303, 1437
BseMI	GCAATG	1 cut(s)	1532
BseMII	CTCAG	6 cut(s)	338, 545, 924, 1047, 1091, 1512
BseNI	ACTGG	3 cut(s)	68, 792, 1006
BseRI	GAGGAG	2 cut(s)	59, 851
BseSI	GKGCMC	1 cut(s)	384
BseXI	GCAGC	5 cut(s)	108, 240, 538, 740, 1472
BseYI	CCCAGC	2 cut(s)	227, 1319
Bsh1236I	CGCG	1 cut(s)	1250
BshFI	GGCC	5 cut(s)	68, 192, 673, 1341, 1539
BshNI	GGYRCC	2 cut(s)	86, 1062
BsiHKAI	GWGCWC	3 cut(s)	512, 703, 1014
BsiHKCI	CYCGRG	3 cut(s)	457, 901, 1553
BsiSI	CCGG	6 cut(s)	57, 78, 84, 90, 492, 1087
BslFI	GGGAC	2 cut(s)	798, 839
BslI	CCNNNNNNNGG	5 cut(s)	63, 90, 325, 1303, 1437
BsmAI	GTCTC	3 cut(s)	45, 54, 327
BsmBI	CGTCTC	2 cut(s)	45, 327
BsmFI	GGGAC	2 cut(s)	798, 839
BsmI	GAATGC	1 cut(s)	183
BsnI	GGCC	5 cut(s)	68, 192, 673, 1341, 1539
BsoBI	CYCGRG	3 cut(s)	457, 901, 1553
Bsp1286I	GDGCHC	4 cut(s)	384, 512, 703, 1014
Bsp143I	GATC	2 cut(s)	1103, 1188
Bsp1720I	GCTNAGC	1 cut(s)	1521
Bsp19I	CCATGG	3 cut(s)	409, 1503, 1594
BspACI	CCGC	6 cut(s)	75, 613, 1066, 1069, 1248, 1280
BspANI	GGCC	5 cut(s)	68, 192, 673, 1341, 1539
BspCNI	CTCAG	6 cut(s)	337, 544, 925, 1048, 1092, 1513
BspFNI	CGCG	1 cut(s)	1250
BspLI	GGNNCC	4 cut(s)	82, 88, 1064, 1113
BspMAI	CTGCAG	1 cut(s)	1185
BspMI	ACCTGC	1 cut(s)	1354
BspPI	GGATC	2 cut(s)	1098, 1196
BspQI	GCTCTTC	1 cut(s)	1372
BspT107I	GGYRCC	2 cut(s)	86, 1062
BsrDI	GCAATG	1 cut(s)	1532
BsrFI	RCCGGY	2 cut(s)	83, 1086
BsrI	ACTGG	3 cut(s)	68, 792, 1006
BssAI	RCCGGY	2 cut(s)	83, 1086
BssECI	CCNNGG	8 cut(s)	8, 409, 451, 1107, 1147, 1226, 1503, 1594
BssMI	GATC	2 cut(s)	1103, 1188
BssNI	GRCGYC	5 cut(s)	54, 87, 201, 1063, 1545
BssT1I	CCWWGG	5 cut(s)	409, 451, 1147, 1503, 1594
Bst2UI	CCWGG	3 cut(s)	263, 1227, 1416
Bst4CI	ACNGT	1 cut(s)	997
Bst6I	CTCTTC	4 cut(s)	277, 815, 845, 1372
BstACI	GRCGYC	5 cut(s)	54, 87, 201, 1063, 1545
BstC8I	GCNNGC	5 cut(s)	85, 251, 1038, 1473, 1588
BstDEI	CTNAG	7 cut(s)	324, 531, 933, 1041, 1056, 1100, 1521
BstDSI	CCRYGG	4 cut(s)	409, 1107, 1503, 1594
BstF5I	GGATG	5 cut(s)	36, 901, 955, 1159, 1389
BstFNI	CGCG	1 cut(s)	1250
BstH2I	RGCGCY	2 cut(s)	90, 1066
BstHHI	GCGC	2 cut(s)	89, 1065
BstKTI	GATC	2 cut(s)	1106, 1191
BstMAI	GTCTC	3 cut(s)	45, 54, 327
BstMBI	GATC	2 cut(s)	1103, 1188
BstNI	CCWGG	3 cut(s)	263, 1227, 1416
BstNSI	RCATGY	2 cut(s)	526, 1399
BstSCI	CCNGG	5 cut(s)	89, 261, 491, 1225, 1414
BstSFI	CTRYAG	2 cut(s)	1181, 1443
BstSLI	GKGCMC	1 cut(s)	384
BstUI	CGCG	1 cut(s)	1250
BstV1I	GCAGC	5 cut(s)	108, 240, 538, 740, 1472
BstV2I	GAAGAC	3 cut(s)	354, 681, 1417
BstX2I	RGATCY	1 cut(s)	1103
BstXI	CCANNNNNNTGG	1 cut(s)	739
BstYI	RGATCY	1 cut(s)	1103
BsuRI	GGCC	5 cut(s)	68, 192, 673, 1341, 1539
BtgI	CCRYGG	4 cut(s)	409, 1107, 1503, 1594
BtsCI	GGATG	5 cut(s)	36, 901, 955, 1159, 1389
BtsIMutI	CAGTG	1 cut(s)	999
BveI	ACCTGC	1 cut(s)	1354
Cac8I	GCNNGC	5 cut(s)	85, 251, 1038, 1473, 1588
CfoI	GCGC	2 cut(s)	89, 1065
Cfr10I	RCCGGY	2 cut(s)	83, 1086
Cfr13I	GGNCC	2 cut(s)	66, 190
CseI	GACGC	1 cut(s)	62
CsiI	ACCWGGT	2 cut(s)	261, 1414
Csp6I	GTAC	7 cut(s)	160, 334, 594, 993, 1165, 1254, 1571
CspCI	CAANNNNNGTGG	2 cut(s)	745, 780
CviAII	CATG	8 cut(s)	136, 410, 523, 829, 1396, 1504, 1595, 1600
CviQI	GTAC	7 cut(s)	160, 334, 594, 993, 1165, 1254, 1571
DdeI	CTNAG	7 cut(s)	324, 531, 933, 1041, 1056, 1100, 1521
DinI	GGCGCC	2 cut(s)	88, 1064
DpnI	GATC	2 cut(s)	1105, 1190
DpnII	GATC	2 cut(s)	1103, 1188
EaeI	YGGCCR	1 cut(s)	1339
Eam1104I	CTCTTC	4 cut(s)	277, 815, 845, 1372
EarI	CTCTTC	4 cut(s)	277, 815, 845, 1372
EciI	GGCGGA	1 cut(s)	1269
Ecl136II	GAGCTC	1 cut(s)	510
Eco130I	CCWWGG	5 cut(s)	409, 451, 1147, 1503, 1594
Eco24I	GRGCYC	1 cut(s)	512
Eco32I	GATATC	1 cut(s)	1465
Eco53kI	GAGCTC	1 cut(s)	510
Eco57I	CTGAAG	4 cut(s)	615, 662, 798, 1190
Eco88I	CYCGRG	3 cut(s)	457, 901, 1553
EcoICRI	GAGCTC	1 cut(s)	510
EcoRII	CCWGG	3 cut(s)	261, 1225, 1414
EcoRV	GATATC	1 cut(s)	1465
EcoT14I	CCWWGG	5 cut(s)	409, 451, 1147, 1503, 1594
EcoT38I	GRGCYC	1 cut(s)	512
EgeI	GGCGCC	2 cut(s)	88, 1064
EheI	GGCGCC	2 cut(s)	88, 1064
ErhI	CCWWGG	5 cut(s)	409, 451, 1147, 1503, 1594
Esp3I	CGTCTC	2 cut(s)	45, 327
FaeI	CATG	8 cut(s)	139, 413, 526, 832, 1399, 1507, 1598, 1603
FaqI	GGGAC	2 cut(s)	798, 839
FatI	CATG	8 cut(s)	135, 409, 522, 828, 1395, 1503, 1594, 1599
FauI	CCCGC	1 cut(s)	606
Fnu4HI	GCNGC	8 cut(s)	5, 97, 254, 527, 729, 1066, 1069, 1486
FokI	GGATG	5 cut(s)	43, 908, 962, 1166, 1376
FriOI	GRGCYC	1 cut(s)	512
Fsp4HI	GCNGC	8 cut(s)	5, 97, 254, 527, 729, 1066, 1069, 1486
FspBI	CTAG	2 cut(s)	1329, 1460
GlaI	GCGC	2 cut(s)	88, 1064
GluI	GCNGC	8 cut(s)	5, 97, 254, 527, 729, 1066, 1069, 1486
GsaI	CCCAGC	2 cut(s)	231, 1323
GsuI	CTGGAG	1 cut(s)	161
HaeII	RGCGCY	2 cut(s)	90, 1066
HaeIII	GGCC	5 cut(s)	68, 192, 673, 1341, 1539
HapII	CCGG	6 cut(s)	57, 78, 84, 90, 492, 1087
HgaI	GACGC	1 cut(s)	62
HhaI	GCGC	2 cut(s)	89, 1065
Hin1I	GRCGYC	5 cut(s)	54, 87, 201, 1063, 1545
Hin1II	CATG	8 cut(s)	139, 413, 526, 832, 1399, 1507, 1598, 1603
Hin6I	GCGC	2 cut(s)	87, 1063
HinP1I	GCGC	2 cut(s)	87, 1063
HincII	GTYRAC	1 cut(s)	268
HindII	GTYRAC	1 cut(s)	268
HindIII	AAGCTT	1 cut(s)	247
HinfI	GANTC	4 cut(s)	269, 917, 1214, 1580
HpaII	CCGG	6 cut(s)	57, 78, 84, 90, 492, 1087
HphI	GGTGA	3 cut(s)	216, 845, 890
Hpy166II	GTNNAC	4 cut(s)	268, 930, 1387, 1549
Hpy188I	TCNGA	7 cut(s)	199, 209, 534, 720, 778, 922, 1517
Hpy188III	TCNNGA	3 cut(s)	443, 793, 1460
Hpy8I	GTNNAC	4 cut(s)	268, 930, 1387, 1549
Hpy99I	CGWCG	1 cut(s)	206
HpyAV	CCTTC	4 cut(s)	773, 1165, 1367, 1529
HpyCH4III	ACNGT	1 cut(s)	997
HpyCH4IV	ACGT	4 cut(s)	18, 201, 218, 1545
HpyCH4V	TGCA	8 cut(s)	343, 526, 553, 1157, 1183, 1235, 1349, 1530
HpyF3I	CTNAG	7 cut(s)	324, 531, 933, 1041, 1056, 1100, 1521
HpySE526I	ACGT	4 cut(s)	18, 201, 218, 1545
Hsp92I	GRCGYC	5 cut(s)	54, 87, 201, 1063, 1545
Hsp92II	CATG	8 cut(s)	139, 413, 526, 832, 1399, 1507, 1598, 1603
HspAI	GCGC	2 cut(s)	87, 1063
KasI	GGCGCC	2 cut(s)	86, 1062
KroI	GCCGGC	1 cut(s)	83
KroNI	GCCGGC	1 cut(s)	85
Kzo9I	GATC	2 cut(s)	1103, 1188
LguI	GCTCTTC	1 cut(s)	1372
LmnI	GCTCC	7 cut(s)	80, 93, 515, 548, 698, 983, 1224
Lsp1109I	GCAGC	5 cut(s)	108, 240, 538, 740, 1472
LweI	GCATC	3 cut(s)	352, 616, 1144
MabI	ACCWGGT	2 cut(s)	261, 1414
MaeI	CTAG	2 cut(s)	1329, 1460
MaeII	ACGT	4 cut(s)	18, 201, 218, 1545
MaeIII	GTNAC	2 cut(s)	797, 997
MalI	GATC	2 cut(s)	1105, 1190
MboI	GATC	2 cut(s)	1103, 1188
MfeI	CAATTG	1 cut(s)	1158
MflI	RGATCY	1 cut(s)	1103
MhlI	GDGCHC	4 cut(s)	384, 512, 703, 1014
MlsI	TGGCCA	1 cut(s)	1341
MluCI	AATT	7 cut(s)	124, 547, 554, 736, 757, 910, 1158
MluNI	TGGCCA	1 cut(s)	1341
Mly113I	GGCGCC	2 cut(s)	87, 1063
MlyI	GAGTC	2 cut(s)	263, 1223
MmeI	TCCRAC	1 cut(s)	1191
Mox20I	TGGCCA	1 cut(s)	1341
MroNI	GCCGGC	1 cut(s)	83
MscI	TGGCCA	1 cut(s)	1341
MseI	TTAA	3 cut(s)	488, 648, 1302
MslI	CAYNNNNRTG	1 cut(s)	1394
Msp20I	TGGCCA	1 cut(s)	1341
MspA1I	CMGCKG	1 cut(s)	1586
MspI	CCGG	6 cut(s)	57, 78, 84, 90, 492, 1087
MspR9I	CCNGG	5 cut(s)	91, 263, 493, 1227, 1416
MunI	CAATTG	1 cut(s)	1158
Mva1269I	GAATGC	1 cut(s)	183
MvaI	CCWGG	3 cut(s)	263, 1227, 1416
MvnI	CGCG	1 cut(s)	1250
NaeI	GCCGGC	1 cut(s)	85
NarI	GGCGCC	2 cut(s)	87, 1063
NciI	CCSGG	2 cut(s)	91, 493
NcoI	CCATGG	3 cut(s)	409, 1503, 1594
NdeII	GATC	2 cut(s)	1103, 1188
NgoMIV	GCCGGC	1 cut(s)	83
NlaIII	CATG	8 cut(s)	139, 413, 526, 832, 1399, 1507, 1598, 1603
NlaIV	GGNNCC	4 cut(s)	82, 88, 1064, 1113
NmeAIII	GCCGAG	1 cut(s)	33
NmuCI	GTSAC	1 cut(s)	997
NspI	RCATGY	2 cut(s)	526, 1399
PaeR7I	CTCGAG	1 cut(s)	457
PciI	ACATGT	1 cut(s)	1395
PciSI	GCTCTTC	1 cut(s)	1372
PcsI	WCGNNNNNNNCGW	1 cut(s)	1551
PctI	GAATGC	1 cut(s)	183
PdiI	GCCGGC	1 cut(s)	85
PfeI	GAWTC	2 cut(s)	917, 1580
PflFI	GACNNNGTC	2 cut(s)	203, 1416
PkrI	GCNGC	8 cut(s)	6, 98, 255, 528, 730, 1067, 1070, 1487
PleI	GAGTC	2 cut(s)	263, 1222
PluTI	GGCGCC	2 cut(s)	90, 1066
PpsI	GAGTC	2 cut(s)	263, 1222
PscI	ACATGT	1 cut(s)	1395
Psp124BI	GAGCTC	1 cut(s)	512
Psp1406I	AACGTT	1 cut(s)	18
Psp6I	CCWGG	3 cut(s)	261, 1225, 1414
PspFI	CCCAGC	2 cut(s)	227, 1319
PspGI	CCWGG	3 cut(s)	261, 1225, 1414
PspN4I	GGNNCC	4 cut(s)	82, 88, 1064, 1113
PspPI	GGNCC	2 cut(s)	66, 190
PspXI	VCTCGAGB	1 cut(s)	457
PstI	CTGCAG	1 cut(s)	1185
PsuI	RGATCY	1 cut(s)	1103
PsyI	GACNNNGTC	2 cut(s)	203, 1416
PvuII	CAGCTG	1 cut(s)	1586
RsaI	GTAC	7 cut(s)	161, 335, 595, 994, 1166, 1255, 1572
RsaNI	GTAC	7 cut(s)	160, 334, 594, 993, 1165, 1254, 1571
RseI	CAYNNNNRTG	1 cut(s)	1394
SacI	GAGCTC	1 cut(s)	512
SapI	GCTCTTC	1 cut(s)	1372
SaqAI	TTAA	3 cut(s)	488, 648, 1302
SatI	GCNGC	8 cut(s)	5, 97, 254, 527, 729, 1066, 1069, 1486
Sau3AI	GATC	2 cut(s)	1103, 1188
Sau96I	GGNCC	2 cut(s)	66, 190
ScaI	AGTACT	4 cut(s)	335, 595, 1255, 1572
SchI	GAGTC	2 cut(s)	263, 1223
ScrFI	CCNGG	5 cut(s)	91, 263, 493, 1227, 1416
SduI	GDGCHC	4 cut(s)	384, 512, 703, 1014
SexAI	ACCWGGT	2 cut(s)	261, 1414
SfaNI	GCATC	3 cut(s)	352, 616, 1144
SfcI	CTRYAG	2 cut(s)	1181, 1443
SfoI	GGCGCC	2 cut(s)	88, 1064
Sfr274I	CTCGAG	1 cut(s)	457
SlaI	CTCGAG	1 cut(s)	457
SmiMI	CAYNNNNRTG	1 cut(s)	1394
SmlI	CTYRAG	3 cut(s)	457, 584, 793
SmoI	CTYRAG	3 cut(s)	457, 584, 793
Sse9I	AATT	7 cut(s)	124, 547, 554, 736, 757, 910, 1158
SsiI	CCGC	6 cut(s)	75, 613, 1066, 1069, 1248, 1280
SspDI	GGCGCC	2 cut(s)	86, 1062
SspI	AATATT	1 cut(s)	538
SspMI	CTAG	2 cut(s)	1329, 1460
SstI	GAGCTC	1 cut(s)	512
StyD4I	CCNGG	5 cut(s)	89, 261, 491, 1225, 1414
StyI	CCWWGG	5 cut(s)	409, 451, 1147, 1503, 1594
TaaI	ACNGT	1 cut(s)	997
TaiI	ACGT	4 cut(s)	21, 204, 221, 1548
TaqI	TCGA	3 cut(s)	122, 315, 458
TasI	AATT	7 cut(s)	124, 547, 554, 736, 757, 910, 1158
TatI	WGTACW	4 cut(s)	333, 593, 1253, 1570
TauI	GCSGC	2 cut(s)	1068, 1071
TfiI	GAWTC	2 cut(s)	917, 1580
Tru1I	TTAA	3 cut(s)	488, 648, 1302
Tru9I	TTAA	3 cut(s)	488, 648, 1302
TscAI	CASTG	1 cut(s)	1006
TseFI	GTSAC	1 cut(s)	997
TseI	GCWGC	6 cut(s)	4, 96, 253, 526, 728, 1485
Tsp45I	GTSAC	1 cut(s)	997
TspDTI	ATGAA	3 cut(s)	105, 264, 482
TspGWI	ACGGA	1 cut(s)	1096
TspRI	CASTG	1 cut(s)	1006
Tth111I	GACNNNGTC	2 cut(s)	203, 1416
XapI	RAATTY	2 cut(s)	124, 736
XbaI	TCTAGA	1 cut(s)	1459
XceI	RCATGY	2 cut(s)	526, 1399
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1400
XhoI	CTCGAG	1 cut(s)	457
XspI	CTAG	2 cut(s)	1329, 1460
ZraI	GACGTC	2 cut(s)	202, 1546
ZrmI	AGTACT	4 cut(s)	335, 595, 1255, 1572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.