Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0001985

Physical Location & Seq

Genomic Coordinates Forward (+)

81640480 .. 81643344

Gene Structure 2865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG647000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGCTGCCCATGTCCAGCGGCGGCGTTTGGATGAACAGAGAGGGAGAAGACGCAGTTTCTTCTTGGACCAGCAACCCCCATAACAACAATGAAACAGAGCCCAAAGACCTGACCCTGGCCAGCTTCAAAGCCATGTTAGAAGGTGACTGGTACTTGAACAACAACAACAACAACGTCGTCGTCCTCAACCAAGACAACATTAACTGCTTCTCTTCCAACCCCTTTCAAATGGACACCTCCGCTTCTTGCTCTCCGTCCATGGCATTTACTCTTTTAAATTCAAATCCCAATCCCAACTCCAAATCCTGCTTCTCTTCTCTCCGAAACTCTAATCCATTCGATAACAATTTCAATTCGGTTGGCGAAAGTGAGCTCTTGACCCAGCTTCAGCAGCAAAATGAAGCTTTGATGAACTTGGCAGCTCTTAATCCTCACTCCCAGGTGGCTGCTACTCCTGCACTCAGTTCCGGCACCGAGTTCCCCTCGAATCAGCTGCTTCCAGCTTCCGGCAACACCGCCGGTGTCTTTAGCAACGCCGGCTTCGAAAGCTCCGGGAGTGCTCTGTTACTGAACAGGGCTGAGGATATGAGTTTCCCTTGTTCCATGGGTGGTGCACAGCCCACTCTGTATCAGAAGCGAGCTGCACTTCGCCAGAACTCCACTGGCAGCAGCGGCTGCGATATATTGGGCAACTTGGAGATTTCGGGGCCCAGTTACTCCGGCTTGGGTTTGGAGGAGAAAAGGAAGAGGAGACATAATGAGAGCGAAATGGAAGACGATATGTCTAGTTTGAATTTTTATGATTCTGATGGTCAAGCGGAGGAGGAGGAGGAGGGGAATGTGAATAATGCCGCTGGTGGAGGCTATTCTAATGCCAATAGTAGTGTCACTGATGGAGATTTCAAGGGGAAGAAGACGGGTTTACCGGCCAAAAATCTCATGGCCGAAAGGCGCCGGAGGAAGAAGCTCAACGACAGGCTCTACATGCTTAGGTCTGTAGTACCCAAGATAAGCAAGATGGATAGGGCGTCCATACTTGGGGATGCAATTGACTATTTGAGAGAGCTTCTGGGAAGGATTGATGACCTCCATAAGGAGCTGGAATCAGATGCACCTGGCTCTTCTTTGCAACCTTCAACAAATTTTAACCCATTGACACCAAATTCACTCACCTATCCCGGCCGTATCAAGGAGGAGCTCCGTCCTAGCTCCTTGCCAACCCCTAAAAGCCAACAACCTGCTGCAAAGGTGGATGTTCAGATAAGGGAAGGACGAGCTCTTAACATCCGCATGTTATCTCCACGCAGACCAGGTCTGTTGCTCTCTACTATGAGAGCCTTGGACAACCTTGGGTTAGACATCCAGCAGGCTGTGATCAGCTGCTTTAATGGATTTGCTCTGGATGTGTTCCAAGCTGAGGTATGTATGTTTGTTTATCTGACAGCATCAGTTTTAAGAATGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

488

Amino Acids

53.21

Weight (kDa)

5.11

Isoelectric Point (pI)

57.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH_SAC51	PF23173	313 - 356	3.4e-06	Transcription factor SAC51 bHLH domain
HLH	PF00010	314 - 356	3.6e-09	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	417 - 470	5.3e-09	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12860 AT1G12860 AT1G12860 AT3G26744 AT3G26744 AT3G26744 AT3G26744 AT3G26744
fragaria_vesca	FvH4_5g09300 FvH4_5g09300
malus_domestica	MD06G1132200.v1.1 MD09G1003800.v1.1 MD14G1148600.v1.1 MD17G1007400.v1.1
prunus_persica	Prupe.3G312800_v2.0.a1 Prupe.3G312800_v2.0.a1 Prupe.5G143200_v2.0.a1
pyrus_communis	pycom06g12380 pycom111g00280 pycom14g12340 pycom17g00300
rosa_chinensis	RchiOBHm_Chr2g0176421 RchiOBHm_Chr7g0188921
rosa_laevigata	RLG00000004651 RLG00000022412
rosa_multiflora	Rmu_co8326225.1_g000001 Rmu_co8487291.1_g000001 Rmu_sc0009140.1_g000010 Rmu_sc0011904.1_g000015 Rmu_ssc0000113.1_g000008
rosa_roxburghii	Rroxscaffold_2G00076450 Rroxscaffold_3G00265940
rosa_rugosa	Rorug02G0594200 Rorug02G0594200 Rorug06G0494600
rosa_samantha	Rh2AG672700 Rh2BG684200 Rh2CG647000 Rh2DG697800 Rh7AG099500 Rh7BG101600 Rh7CG102900 Rh7DG101300
rosa_wichuraiana	Rw2G055180 Rw7G008570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1246
AccB1I	GGYRCC	2 cut(s)	470, 951
AciI	CCGC	8 cut(s)	18, 21, 240, 516, 672, 818, 852, 1288
AcoI	YGGCCR	4 cut(s)	117, 927, 942, 1180
AcsI	RAATTY	4 cut(s)	277, 793, 1141, 1162
AcuI	CTGAAG	1 cut(s)	371
AcyI	GRCGYC	2 cut(s)	952, 1028
AfaI	GTAC	2 cut(s)	152, 1002
AfiI	CCNNNNNNNGG	6 cut(s)	115, 506, 1038, 1093, 1189, 1417
AgsI	TTSAA	8 cut(s)	127, 157, 227, 282, 352, 793, 904, 1137
AhdI	GACNNNNNGTC	1 cut(s)	781
AjnI	CCWGG	4 cut(s)	114, 438, 1114, 1309
AjuI	GAANNNNNNNTTGG	2 cut(s)	293, 325
Alw21I	GWGCWC	5 cut(s)	375, 562, 616, 1200, 1279
Alw26I	GTCTC	1 cut(s)	745
Alw44I	GTGCAC	1 cut(s)	612
AlwNI	CAGNNNCTG	1 cut(s)	675
AoxI	GGCC	5 cut(s)	117, 707, 927, 942, 1180
ApaI	GGGCCC	1 cut(s)	711
ApaLI	GTGCAC	1 cut(s)	612
ApoI	RAATTY	4 cut(s)	277, 793, 1141, 1162
AspLEI	GCGC	1 cut(s)	954
AspS9I	GGNCC	3 cut(s)	66, 707, 708
AsuC2I	CCSGG	2 cut(s)	553, 1179
AsuHPI	GGTGA	2 cut(s)	155, 1162
AsuII	TTCGAA	1 cut(s)	543
AvaII	GGWCC	1 cut(s)	66
BaeGI	GKGCMC	2 cut(s)	616, 711
BalI	TGGCCA	1 cut(s)	119
BanI	GGYRCC	2 cut(s)	470, 951
BanII	GRGCYC	5 cut(s)	102, 375, 711, 1200, 1279
BbsI	GAAGAC	3 cut(s)	54, 780, 920
Bbv12I	GWGCWC	5 cut(s)	375, 562, 616, 1200, 1279
BbvCI	CCTCAGC	2 cut(s)	579, 1416
BccI	CCATC	3 cut(s)	803, 887, 1012
BceAI	ACGGC	1 cut(s)	1167
BcgI	CGANNNNNNTGC	2 cut(s)	475, 509
BciT130I	CCWGG	4 cut(s)	116, 440, 1116, 1311
BclI	TGATCA	1 cut(s)	1374
BcnI	CCSGG	2 cut(s)	553, 1179
BcoDI	GTCTC	1 cut(s)	745
BfaI	CTAG	2 cut(s)	786, 1206
BfmI	CTRYAG	1 cut(s)	996
BfoI	RGCGCY	1 cut(s)	955
BfuAI	ACCTGC	1 cut(s)	1246
Bme1390I	CCNGG	6 cut(s)	116, 440, 553, 1116, 1179, 1311
Bme18I	GGWCC	1 cut(s)	66
BmeRI	GACNNNNNGTC	1 cut(s)	781
BmgT120I	GGNCC	3 cut(s)	66, 707, 708
BmiI	GGNNCC	4 cut(s)	472, 708, 709, 953
BmrFI	CCNGG	6 cut(s)	116, 440, 553, 1116, 1179, 1311
BmrI	ACTGGG	1 cut(s)	705
BmsI	GCATC	3 cut(s)	1033, 1099, 1454
BmuI	ACTGGG	1 cut(s)	705
BpiI	GAAGAC	3 cut(s)	54, 780, 920
BplI	GAGNNNNNCTC	2 cut(s)	467, 499
Bpu10I	CCTNAGC	3 cut(s)	579, 989, 1416
Bpu14I	TTCGAA	1 cut(s)	543
BpuMI	CCSGG	2 cut(s)	553, 1179
BsaHI	GRCGYC	2 cut(s)	952, 1028
BsaJI	CCNNGG	6 cut(s)	114, 258, 438, 603, 1338, 1348
Bsc4I	CCNNNNNNNGG	6 cut(s)	115, 506, 1038, 1093, 1189, 1417
Bse118I	RCCGGY	3 cut(s)	518, 536, 925
Bse1I	ACTGG	3 cut(s)	152, 667, 711
BseBI	CCWGG	4 cut(s)	116, 440, 1116, 1311
BseDI	CCNNGG	6 cut(s)	114, 258, 438, 603, 1338, 1348
BseGI	GGATG	6 cut(s)	36, 1048, 1258, 1284, 1359, 1408
BseLI	CCNNNNNNNGG	6 cut(s)	115, 506, 1038, 1093, 1189, 1417
BseMII	CTCAG	3 cut(s)	475, 570, 1407
BseNI	ACTGG	3 cut(s)	152, 667, 711
BseRI	GAGGAG	7 cut(s)	749, 763, 836, 839, 842, 845, 1208
BseSI	GKGCMC	2 cut(s)	616, 711
BseX3I	CGGCCG	1 cut(s)	1180
BseYI	CCCAGC	1 cut(s)	381
BsgI	GTGCAG	2 cut(s)	441, 627
Bsh1285I	CGRYCG	1 cut(s)	1183
BshFI	GGCC	5 cut(s)	119, 709, 929, 944, 1182
BshNI	GGYRCC	2 cut(s)	470, 951
BsiEI	CGRYCG	1 cut(s)	1183
BsiHKAI	GWGCWC	5 cut(s)	375, 562, 616, 1200, 1279
BsiSI	CCGG	9 cut(s)	468, 507, 519, 537, 552, 720, 926, 955, 1179
BslI	CCNNNNNNNGG	6 cut(s)	115, 506, 1038, 1093, 1189, 1417
BsmAI	GTCTC	1 cut(s)	745
BsnI	GGCC	5 cut(s)	119, 709, 929, 944, 1182
Bsp119I	TTCGAA	1 cut(s)	543
Bsp120I	GGGCCC	1 cut(s)	707
Bsp1286I	GDGCHC	7 cut(s)	102, 375, 562, 616, 711, 1200, 1279
Bsp143I	GATC	1 cut(s)	1374
Bsp19I	CCATGG	2 cut(s)	258, 603
BspACI	CCGC	8 cut(s)	18, 21, 240, 516, 672, 818, 852, 1288
BspANI	GGCC	5 cut(s)	119, 709, 929, 944, 1182
BspCNI	CTCAG	3 cut(s)	474, 571, 1408
BspLI	GGNNCC	4 cut(s)	472, 708, 709, 953
BspMI	ACCTGC	1 cut(s)	1246
BspQI	GCTCTTC	1 cut(s)	1126
BspT104I	TTCGAA	1 cut(s)	543
BspT107I	GGYRCC	2 cut(s)	470, 951
BsrFI	RCCGGY	3 cut(s)	518, 536, 925
BsrI	ACTGG	3 cut(s)	152, 667, 711
BssAI	RCCGGY	3 cut(s)	518, 536, 925
BssECI	CCNNGG	6 cut(s)	114, 258, 438, 603, 1338, 1348
BssMI	GATC	1 cut(s)	1374
BssNI	GRCGYC	2 cut(s)	952, 1028
BssT1I	CCWWGG	4 cut(s)	258, 603, 1338, 1348
Bst2UI	CCWGG	4 cut(s)	116, 440, 1116, 1311
Bst6I	CTCTTC	4 cut(s)	217, 319, 740, 1126
BstACI	GRCGYC	2 cut(s)	952, 1028
BstAPI	GCANNNNNTGC	1 cut(s)	675
BstBI	TTCGAA	1 cut(s)	543
BstC8I	GCNNGC	4 cut(s)	121, 538, 639, 1368
BstDEI	CTNAG	4 cut(s)	461, 579, 989, 1416
BstDSI	CCRYGG	2 cut(s)	258, 603
BstENI	CCTNNNNNAGG	1 cut(s)	1091
BstF5I	GGATG	6 cut(s)	36, 1048, 1258, 1284, 1359, 1408
BstH2I	RGCGCY	1 cut(s)	955
BstHHI	GCGC	1 cut(s)	954
BstKTI	GATC	1 cut(s)	1377
BstMAI	GTCTC	1 cut(s)	745
BstMBI	GATC	1 cut(s)	1374
BstMCI	CGRYCG	1 cut(s)	1183
BstMWI	GCNNNNNNNGC	7 cut(s)	391, 455, 537, 546, 672, 675, 985
BstNI	CCWGG	4 cut(s)	116, 440, 1116, 1311
BstNSI	RCATGY	2 cut(s)	988, 1294
BstSCI	CCNGG	6 cut(s)	114, 438, 551, 1114, 1177, 1309
BstSFI	CTRYAG	1 cut(s)	996
BstSLI	GKGCMC	2 cut(s)	616, 711
BstV2I	GAAGAC	3 cut(s)	54, 780, 920
BstZI	CGGCCG	1 cut(s)	1180
BsuRI	GGCC	5 cut(s)	119, 709, 929, 944, 1182
BtgI	CCRYGG	2 cut(s)	258, 603
BtsCI	GGATG	6 cut(s)	36, 1048, 1258, 1284, 1359, 1408
BtsIMutI	CAGTG	2 cut(s)	660, 888
BveI	ACCTGC	1 cut(s)	1246
Cac8I	GCNNGC	4 cut(s)	121, 538, 639, 1368
CaiI	CAGNNNCTG	1 cut(s)	675
CfoI	GCGC	1 cut(s)	954
Cfr10I	RCCGGY	3 cut(s)	518, 536, 925
Cfr13I	GGNCC	3 cut(s)	66, 707, 708
CseI	GACGC	2 cut(s)	59, 1017
CsiI	ACCWGGT	1 cut(s)	1309
Csp6I	GTAC	2 cut(s)	151, 1001
CviAII	CATG	7 cut(s)	10, 133, 259, 604, 940, 985, 1291
CviQI	GTAC	2 cut(s)	151, 1001
DdeI	CTNAG	4 cut(s)	461, 579, 989, 1416
DinI	GGCGCC	1 cut(s)	953
DpnI	GATC	1 cut(s)	1376
DpnII	GATC	1 cut(s)	1374
DraI	TTTAAA	1 cut(s)	276
DriI	GACNNNNNGTC	1 cut(s)	781
EaeI	YGGCCR	4 cut(s)	117, 927, 942, 1180
EagI	CGGCCG	1 cut(s)	1180
Eam1104I	CTCTTC	4 cut(s)	217, 319, 740, 1126
Eam1105I	GACNNNNNGTC	1 cut(s)	781
EarI	CTCTTC	4 cut(s)	217, 319, 740, 1126
Ecl136II	GAGCTC	3 cut(s)	373, 1198, 1277
EclXI	CGGCCG	1 cut(s)	1180
Eco130I	CCWWGG	4 cut(s)	258, 603, 1338, 1348
Eco24I	GRGCYC	5 cut(s)	102, 375, 711, 1200, 1279
Eco47I	GGWCC	1 cut(s)	66
Eco52I	CGGCCG	1 cut(s)	1180
Eco53kI	GAGCTC	3 cut(s)	373, 1198, 1277
Eco57I	CTGAAG	1 cut(s)	371
EcoICRI	GAGCTC	3 cut(s)	373, 1198, 1277
EcoNI	CCTNNNNNAGG	1 cut(s)	1091
EcoO109I	RGGNCCY	1 cut(s)	707
EcoRII	CCWGG	4 cut(s)	114, 438, 1114, 1309
EcoT14I	CCWWGG	4 cut(s)	258, 603, 1338, 1348
EcoT38I	GRGCYC	5 cut(s)	102, 375, 711, 1200, 1279
EgeI	GGCGCC	1 cut(s)	953
EheI	GGCGCC	1 cut(s)	953
ErhI	CCWWGG	4 cut(s)	258, 603, 1338, 1348
FaeI	CATG	7 cut(s)	13, 136, 262, 607, 943, 988, 1294
FatI	CATG	7 cut(s)	9, 132, 258, 603, 939, 984, 1290
FbaI	TGATCA	1 cut(s)	1374
FokI	GGATG	6 cut(s)	43, 1055, 1265, 1271, 1346, 1415
FriOI	GRGCYC	5 cut(s)	102, 375, 711, 1200, 1279
FspBI	CTAG	2 cut(s)	786, 1206
GlaI	GCGC	1 cut(s)	953
GsaI	CCCAGC	1 cut(s)	385
HaeII	RGCGCY	1 cut(s)	955
HaeIII	GGCC	5 cut(s)	119, 709, 929, 944, 1182
HapII	CCGG	9 cut(s)	468, 507, 519, 537, 552, 720, 926, 955, 1179
HgaI	GACGC	2 cut(s)	59, 1017
HhaI	GCGC	1 cut(s)	954
Hin1I	GRCGYC	2 cut(s)	952, 1028
Hin1II	CATG	7 cut(s)	13, 136, 262, 607, 943, 988, 1294
Hin6I	GCGC	1 cut(s)	952
HinP1I	GCGC	1 cut(s)	952
HindIII	AAGCTT	1 cut(s)	402
HinfI	GANTC	3 cut(s)	487, 803, 1103
HpaII	CCGG	9 cut(s)	468, 507, 519, 537, 552, 720, 926, 955, 1179
HphI	GGTGA	2 cut(s)	155, 1162
Hpy166II	GTNNAC	2 cut(s)	614, 923
Hpy188I	TCNGA	6 cut(s)	323, 633, 808, 1108, 1260, 1440
Hpy188III	TCNNGA	2 cut(s)	376, 1400
Hpy8I	GTNNAC	2 cut(s)	614, 923
Hpy99I	CGWCG	2 cut(s)	179, 182
HpyAV	CCTTC	4 cut(s)	134, 1068, 1143, 1262
HpyCH4IV	ACGT	1 cut(s)	174
HpyCH4V	TGCA	7 cut(s)	458, 614, 644, 1046, 1112, 1129, 1244
HpyF10VI	GCNNNNNNNGC	7 cut(s)	391, 455, 537, 546, 672, 675, 985
HpyF3I	CTNAG	4 cut(s)	461, 579, 989, 1416
HpySE526I	ACGT	1 cut(s)	174
Hsp92I	GRCGYC	2 cut(s)	952, 1028
Hsp92II	CATG	7 cut(s)	13, 136, 262, 607, 943, 988, 1294
HspAI	GCGC	1 cut(s)	952
KasI	GGCGCC	1 cut(s)	951
KroI	GCCGGC	1 cut(s)	536
KroNI	GCCGGC	1 cut(s)	538
Ksp22I	TGATCA	1 cut(s)	1374
Kzo9I	GATC	1 cut(s)	1374
LguI	GCTCTTC	1 cut(s)	1126
LmnI	GCTCC	5 cut(s)	554, 1096, 1195, 1203, 1214
LweI	GCATC	3 cut(s)	1033, 1099, 1454
MabI	ACCWGGT	1 cut(s)	1309
MaeI	CTAG	2 cut(s)	786, 1206
MaeII	ACGT	1 cut(s)	174
MaeIII	GTNAC	4 cut(s)	143, 564, 713, 886
MalI	GATC	1 cut(s)	1376
MboI	GATC	1 cut(s)	1374
MfeI	CAATTG	1 cut(s)	1047
MhlI	GDGCHC	7 cut(s)	102, 375, 562, 616, 711, 1200, 1279
MlsI	TGGCCA	1 cut(s)	119
MluCI	AATT	8 cut(s)	277, 346, 352, 793, 1047, 1141, 1162, 1462
MluNI	TGGCCA	1 cut(s)	119
Mly113I	GGCGCC	1 cut(s)	952
MmeI	TCCRAC	1 cut(s)	240
Mox20I	TGGCCA	1 cut(s)	119
MroNI	GCCGGC	1 cut(s)	536
MscI	TGGCCA	1 cut(s)	119
MseI	TTAA	7 cut(s)	201, 275, 426, 1146, 1281, 1386, 1454
MslI	CAYNNNNRTG	1 cut(s)	1289
Msp20I	TGGCCA	1 cut(s)	119
MspA1I	CMGCKG	5 cut(s)	18, 493, 672, 854, 1380
MspI	CCGG	9 cut(s)	468, 507, 519, 537, 552, 720, 926, 955, 1179
MspR9I	CCNGG	6 cut(s)	116, 440, 553, 1116, 1179, 1311
MunI	CAATTG	1 cut(s)	1047
MvaI	CCWGG	4 cut(s)	116, 440, 1116, 1311
MwoI	GCNNNNNNNGC	7 cut(s)	391, 455, 537, 546, 672, 675, 985
NaeI	GCCGGC	1 cut(s)	538
NarI	GGCGCC	1 cut(s)	952
NciI	CCSGG	2 cut(s)	553, 1179
NcoI	CCATGG	2 cut(s)	258, 603
NdeII	GATC	1 cut(s)	1374
NgoMIV	GCCGGC	1 cut(s)	536
NlaIII	CATG	7 cut(s)	13, 136, 262, 607, 943, 988, 1294
NlaIV	GGNNCC	4 cut(s)	472, 708, 709, 953
NmuCI	GTSAC	2 cut(s)	143, 886
NspI	RCATGY	2 cut(s)	988, 1294
NspV	TTCGAA	1 cut(s)	543
PciSI	GCTCTTC	1 cut(s)	1126
PcsI	WCGNNNNNNNCGW	1 cut(s)	540
PdiI	GCCGGC	1 cut(s)	538
PfeI	GAWTC	3 cut(s)	487, 803, 1103
PflFI	GACNNNGTC	1 cut(s)	1311
PfoI	TCCNGGA	1 cut(s)	551
PluTI	GGCGCC	1 cut(s)	955
Psp124BI	GAGCTC	3 cut(s)	375, 1200, 1279
Psp6I	CCWGG	4 cut(s)	114, 438, 1114, 1309
PspFI	CCCAGC	1 cut(s)	381
PspGI	CCWGG	4 cut(s)	114, 438, 1114, 1309
PspN4I	GGNNCC	4 cut(s)	472, 708, 709, 953
PspOMI	GGGCCC	1 cut(s)	707
PspPI	GGNCC	3 cut(s)	66, 707, 708
PstNI	CAGNNNCTG	1 cut(s)	675
PsyI	GACNNNGTC	1 cut(s)	1311
PvuII	CAGCTG	2 cut(s)	493, 1380
RsaI	GTAC	2 cut(s)	152, 1002
RsaNI	GTAC	2 cut(s)	151, 1001
RseI	CAYNNNNRTG	1 cut(s)	1289
SacI	GAGCTC	3 cut(s)	375, 1200, 1279
SapI	GCTCTTC	1 cut(s)	1126
SaqAI	TTAA	7 cut(s)	201, 275, 426, 1146, 1281, 1386, 1454
Sau3AI	GATC	1 cut(s)	1374
Sau96I	GGNCC	3 cut(s)	66, 707, 708
ScrFI	CCNGG	6 cut(s)	116, 440, 553, 1116, 1179, 1311
SduI	GDGCHC	7 cut(s)	102, 375, 562, 616, 711, 1200, 1279
SexAI	ACCWGGT	1 cut(s)	1309
SfaNI	GCATC	3 cut(s)	1033, 1099, 1454
SfcI	CTRYAG	1 cut(s)	996
SfoI	GGCGCC	1 cut(s)	953
SfuI	TTCGAA	1 cut(s)	543
SgrAI	CRCCGGYG	1 cut(s)	518
SinI	GGWCC	1 cut(s)	66
SmiMI	CAYNNNNRTG	1 cut(s)	1289
Sse9I	AATT	8 cut(s)	277, 346, 352, 793, 1047, 1141, 1162, 1462
SsiI	CCGC	8 cut(s)	18, 21, 240, 516, 672, 818, 852, 1288
SspDI	GGCGCC	1 cut(s)	951
SspMI	CTAG	2 cut(s)	786, 1206
SstI	GAGCTC	3 cut(s)	375, 1200, 1279
StyD4I	CCNGG	6 cut(s)	114, 438, 551, 1114, 1177, 1309
StyI	CCWWGG	4 cut(s)	258, 603, 1338, 1348
TaiI	ACGT	1 cut(s)	177
TaqI	TCGA	3 cut(s)	339, 485, 543
TasI	AATT	8 cut(s)	277, 346, 352, 793, 1047, 1141, 1162, 1462
TauI	GCSGC	4 cut(s)	21, 24, 675, 854
TfiI	GAWTC	3 cut(s)	487, 803, 1103
Tru1I	TTAA	7 cut(s)	201, 275, 426, 1146, 1281, 1386, 1454
Tru9I	TTAA	7 cut(s)	201, 275, 426, 1146, 1281, 1386, 1454
TscAI	CASTG	2 cut(s)	667, 895
TseFI	GTSAC	2 cut(s)	143, 886
Tsp45I	GTSAC	2 cut(s)	143, 886
TspDTI	ATGAA	4 cut(s)	47, 105, 414, 425
TspGWI	ACGGA	2 cut(s)	243, 1190
TspRI	CASTG	2 cut(s)	667, 895
Tth111I	GACNNNGTC	1 cut(s)	1311
VneI	GTGCAC	1 cut(s)	612
VpaK11BI	GGWCC	1 cut(s)	66
XagI	CCTNNNNNAGG	1 cut(s)	1091
XapI	RAATTY	4 cut(s)	277, 793, 1141, 1162
XceI	RCATGY	2 cut(s)	988, 1294
XcmI	CCANNNNNNNNNTGG	2 cut(s)	659, 937
XspI	CTAG	2 cut(s)	786, 1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.