Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001985

Physical Location & Seq

Genomic Coordinates Forward (+)

88244910 .. 88247805

Gene Structure 2896 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ54343

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGCTGCCCATGTCCAGCGGCGGCGTTTGGATGAACAGAGAGGGAGAAGACGCAGTTTCTTCTTGGACCAGCAACCCCCATAACAACAATGAAACAGAGCCCAAAGACCTGACCCTGGCCAGCTTCAAAGCCATGTTAGAAGGTGACTGGTACTTGAACAACAACAACAACAACAACGTCGTCGTCCTCAACCAAGACAACATTAACTGCTTCTCTTCCAACCCCTTTCAAATGGACACCTCCGCTTCTTGCTCTCCGTCCATGGCATTTACTCTTTTAAATTCAAATCCCAATCCCAACTCCAAATCCTGCTTCTCTTCTCTCCGAAACTCTAATCCATTCGATAACAATTTCAATTTGGTTGGCGAAAGTGAGCTCTTGACCCAGCTTCAGCAGCAAAATGAAGCTTTGATGAACTTGGCAGCTCTTAATCCTCACTCCCAGGTGGCTGCTACTCCTGCACTCAGTTCCGGCACCGAGTTCCCCTCGAATCAGCTGCTTCCAGCTTCCGGCAACACCGCCGGTGTCTTTAGCAACGCCGGCTTCGAAAGCTCCGGGAGTGCTCTGTTACTGAACAGGGCTGAGGATATGAGTTTCCCTTGTTCCATGGGTGGGGCACAGCCCACTCTGTATCAGAAGCGAGCTGCACTTCGCCAGAACTCCACTGGCAGCAGCGGCTGCGATATATTGGGCAACTTGGAGATTTCGGGGCCCAGTTACTCCGGCTTGGGTTTGGAGGAGAAAAGGAAGAGGAGACACAATGAGAGCGAAATGGAAGACGATATGTCTAGTTTGAATTTTTATGATTCTGATGGTCAAGCGGAGGAGGAGGAGGAGGGGAATGTGAATAATGCCGCTGGTGGAGGCTATTCTAATGCCAACAGTAGTGTCACTGATGGAGATTTCAAGGGGAAGAAGACGGGTTTACCGGCCAAAAATCTCATGGCCGAAAGGCGCCGGAGGAAGAAGCTCAACGACAGGCTCTACATGCTTAGGTCTGTAGTACCCAAGATAAGCAAGATGGATAGGGCGTCCATACTTGGGGATGCAATTGACTATTTGAGAGAGCTTCTGGGAAGGATTGATGACCTCCATAAGGAGCTGGAATCAGATGCACCTGGCTCTTCGTTGCAACCTTCAACAAATTTTAACCCATTGACACCAAATTCACTCACCTATCCCGGCCGTATCAAGGAGGAGCTCCGTCCTAGCTCCTTGCCAACCCCTAAAAGCCAACAACCTGCTGCAAAGGTGGATGTTCAGATAAGGGAAGGACGAGCTCTTAACATCCGCATGTTATCTCCACGCAGACCAGGTCTGTTGCTCTCTACTATGAGAGCCTTGGACAACCTTGGGTTAGACATCCAGCAGGCTGTGATCAGCTGCTTTAATGGATTTGCTCTGGATGTGTTCCAAGCTCAGCAATCCAGGGAAAGCCATTTCTTGCCTGAGCAAATTAGAGCGGTACTCTTGAAATCAGCTGGATTTGATGGTATGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

500

Amino Acids

54.55

Weight (kDa)

5.18

Isoelectric Point (pI)

58.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH_SAC51	PF23173	314 - 357	3.5e-06	Transcription factor SAC51 bHLH domain
HLH	PF00010	315 - 357	3.8e-09	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	418 - 486	9.1e-10	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12860 AT1G12860 AT1G12860 AT3G26744 AT3G26744 AT3G26744 AT3G26744 AT3G26744
fragaria_vesca	FvH4_5g09300 FvH4_5g09300
malus_domestica	MD06G1132200.v1.1 MD09G1003800.v1.1 MD14G1148600.v1.1 MD17G1007400.v1.1
prunus_persica	Prupe.3G312800_v2.0.a1 Prupe.3G312800_v2.0.a1 Prupe.5G143200_v2.0.a1
pyrus_communis	pycom06g12380 pycom111g00280 pycom14g12340 pycom17g00300
rosa_chinensis	RchiOBHm_Chr2g0176421 RchiOBHm_Chr7g0188921
rosa_laevigata	RLG00000004651 RLG00000022412
rosa_multiflora	Rmu_co8326225.1_g000001 Rmu_co8487291.1_g000001 Rmu_sc0009140.1_g000010 Rmu_sc0011904.1_g000015 Rmu_ssc0000113.1_g000008
rosa_roxburghii	Rroxscaffold_2G00076450 Rroxscaffold_3G00265940
rosa_rugosa	Rorug02G0594200 Rorug02G0594200 Rorug06G0494600
rosa_samantha	Rh2AG672700 Rh2BG684200 Rh2CG647000 Rh2DG697800 Rh7AG099500 Rh7BG101600 Rh7CG102900 Rh7DG101300
rosa_wichuraiana	Rw2G055180 Rw7G008570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1249
AccB1I	GGYRCC	2 cut(s)	473, 954
AccBSI	CCGCTC	1 cut(s)	1463
AciI	CCGC	9 cut(s)	18, 21, 243, 519, 675, 821, 855, 1291, 1463
AcoI	YGGCCR	4 cut(s)	117, 930, 945, 1183
AcsI	RAATTY	4 cut(s)	280, 796, 1144, 1165
AcuI	CTGAAG	1 cut(s)	374
AcyI	GRCGYC	2 cut(s)	955, 1031
AfaI	GTAC	3 cut(s)	152, 1005, 1467
AfiI	CCNNNNNNNGG	6 cut(s)	115, 509, 612, 1041, 1096, 1192
AgsI	TTSAA	9 cut(s)	127, 157, 230, 285, 355, 796, 907, 1140, 1474
AhdI	GACNNNNNGTC	1 cut(s)	784
AjnI	CCWGG	5 cut(s)	114, 441, 1117, 1312, 1427
AjuI	GAANNNNNNNTTGG	2 cut(s)	296, 328
Alw21I	GWGCWC	4 cut(s)	378, 565, 1203, 1282
Alw26I	GTCTC	1 cut(s)	748
AlwNI	CAGNNNCTG	1 cut(s)	678
AoxI	GGCC	5 cut(s)	117, 710, 930, 945, 1183
ApaI	GGGCCC	1 cut(s)	714
ApoI	RAATTY	4 cut(s)	280, 796, 1144, 1165
AspLEI	GCGC	1 cut(s)	957
AspS9I	GGNCC	3 cut(s)	66, 710, 711
AsuC2I	CCSGG	2 cut(s)	556, 1182
AsuHPI	GGTGA	2 cut(s)	155, 1165
AsuII	TTCGAA	1 cut(s)	546
AvaII	GGWCC	1 cut(s)	66
BaeGI	GKGCMC	2 cut(s)	619, 714
BalI	TGGCCA	1 cut(s)	119
BanI	GGYRCC	2 cut(s)	473, 954
BanII	GRGCYC	5 cut(s)	102, 378, 714, 1203, 1282
BbsI	GAAGAC	3 cut(s)	54, 783, 923
Bbv12I	GWGCWC	4 cut(s)	378, 565, 1203, 1282
BbvCI	CCTCAGC	1 cut(s)	582
BccI	CCATC	4 cut(s)	806, 890, 1015, 1484
BceAI	ACGGC	1 cut(s)	1170
BcgI	CGANNNNNNTGC	2 cut(s)	478, 512
BciT130I	CCWGG	5 cut(s)	116, 443, 1119, 1314, 1429
BclI	TGATCA	1 cut(s)	1377
BcnI	CCSGG	2 cut(s)	556, 1182
BcoDI	GTCTC	1 cut(s)	748
BfaI	CTAG	2 cut(s)	789, 1209
BfmI	CTRYAG	1 cut(s)	999
BfoI	RGCGCY	1 cut(s)	958
BfuAI	ACCTGC	1 cut(s)	1249
BlpI	GCTNAGC	1 cut(s)	1419
Bme1390I	CCNGG	7 cut(s)	116, 443, 556, 1119, 1182, 1314, 1429
Bme18I	GGWCC	1 cut(s)	66
BmeRI	GACNNNNNGTC	1 cut(s)	784
BmgT120I	GGNCC	3 cut(s)	66, 710, 711
BmiI	GGNNCC	4 cut(s)	475, 711, 712, 956
BmrFI	CCNGG	7 cut(s)	116, 443, 556, 1119, 1182, 1314, 1429
BmrI	ACTGGG	1 cut(s)	708
BmsI	GCATC	2 cut(s)	1036, 1102
BmuI	ACTGGG	1 cut(s)	708
BpiI	GAAGAC	3 cut(s)	54, 783, 923
BplI	GAGNNNNNCTC	4 cut(s)	470, 502, 1452, 1484
Bpu10I	CCTNAGC	3 cut(s)	582, 992, 1449
Bpu1102I	GCTNAGC	1 cut(s)	1419
Bpu14I	TTCGAA	1 cut(s)	546
BpuMI	CCSGG	2 cut(s)	556, 1182
BsaHI	GRCGYC	2 cut(s)	955, 1031
BsaJI	CCNNGG	7 cut(s)	114, 261, 441, 606, 1341, 1351, 1428
Bsc4I	CCNNNNNNNGG	6 cut(s)	115, 509, 612, 1041, 1096, 1192
Bse118I	RCCGGY	3 cut(s)	521, 539, 928
Bse1I	ACTGG	3 cut(s)	152, 670, 714
BseBI	CCWGG	5 cut(s)	116, 443, 1119, 1314, 1429
BseDI	CCNNGG	7 cut(s)	114, 261, 441, 606, 1341, 1351, 1428
BseGI	GGATG	6 cut(s)	36, 1051, 1261, 1287, 1362, 1411
BseLI	CCNNNNNNNGG	6 cut(s)	115, 509, 612, 1041, 1096, 1192
BseMII	CTCAG	4 cut(s)	478, 573, 1433, 1440
BseNI	ACTGG	3 cut(s)	152, 670, 714
BseRI	GAGGAG	7 cut(s)	752, 766, 839, 842, 845, 848, 1211
BseSI	GKGCMC	2 cut(s)	619, 714
BseX3I	CGGCCG	1 cut(s)	1183
BseYI	CCCAGC	1 cut(s)	384
BsgI	GTGCAG	2 cut(s)	444, 630
Bsh1285I	CGRYCG	1 cut(s)	1186
BshFI	GGCC	5 cut(s)	119, 712, 932, 947, 1185
BshNI	GGYRCC	2 cut(s)	473, 954
BsiEI	CGRYCG	1 cut(s)	1186
BsiHKAI	GWGCWC	4 cut(s)	378, 565, 1203, 1282
BsiSI	CCGG	9 cut(s)	471, 510, 522, 540, 555, 723, 929, 958, 1182
BslI	CCNNNNNNNGG	6 cut(s)	115, 509, 612, 1041, 1096, 1192
BsmAI	GTCTC	1 cut(s)	748
BsnI	GGCC	5 cut(s)	119, 712, 932, 947, 1185
Bsp119I	TTCGAA	1 cut(s)	546
Bsp120I	GGGCCC	1 cut(s)	710
Bsp1286I	GDGCHC	7 cut(s)	102, 378, 565, 619, 714, 1203, 1282
Bsp143I	GATC	1 cut(s)	1377
Bsp1720I	GCTNAGC	1 cut(s)	1419
Bsp19I	CCATGG	2 cut(s)	261, 606
BspACI	CCGC	9 cut(s)	18, 21, 243, 519, 675, 821, 855, 1291, 1463
BspANI	GGCC	5 cut(s)	119, 712, 932, 947, 1185
BspCNI	CTCAG	4 cut(s)	477, 574, 1432, 1441
BspLI	GGNNCC	4 cut(s)	475, 711, 712, 956
BspMI	ACCTGC	1 cut(s)	1249
BspQI	GCTCTTC	1 cut(s)	1129
BspT104I	TTCGAA	1 cut(s)	546
BspT107I	GGYRCC	2 cut(s)	473, 954
BsrBI	CCGCTC	1 cut(s)	1463
BsrFI	RCCGGY	3 cut(s)	521, 539, 928
BsrI	ACTGG	3 cut(s)	152, 670, 714
BssAI	RCCGGY	3 cut(s)	521, 539, 928
BssECI	CCNNGG	7 cut(s)	114, 261, 441, 606, 1341, 1351, 1428
BssMI	GATC	1 cut(s)	1377
BssNI	GRCGYC	2 cut(s)	955, 1031
BssT1I	CCWWGG	4 cut(s)	261, 606, 1341, 1351
Bst2UI	CCWGG	5 cut(s)	116, 443, 1119, 1314, 1429
Bst4CI	ACNGT	1 cut(s)	884
Bst6I	CTCTTC	4 cut(s)	220, 322, 743, 1129
BstACI	GRCGYC	2 cut(s)	955, 1031
BstAPI	GCANNNNNTGC	1 cut(s)	678
BstBI	TTCGAA	1 cut(s)	546
BstC8I	GCNNGC	4 cut(s)	121, 541, 642, 1371
BstDEI	CTNAG	5 cut(s)	464, 582, 992, 1419, 1449
BstDSI	CCRYGG	2 cut(s)	261, 606
BstENI	CCTNNNNNAGG	1 cut(s)	1094
BstF5I	GGATG	6 cut(s)	36, 1051, 1261, 1287, 1362, 1411
BstH2I	RGCGCY	1 cut(s)	958
BstHHI	GCGC	1 cut(s)	957
BstKTI	GATC	1 cut(s)	1380
BstMAI	GTCTC	1 cut(s)	748
BstMBI	GATC	1 cut(s)	1377
BstMCI	CGRYCG	1 cut(s)	1186
BstMWI	GCNNNNNNNGC	7 cut(s)	394, 458, 540, 549, 675, 678, 988
BstNI	CCWGG	5 cut(s)	116, 443, 1119, 1314, 1429
BstNSI	RCATGY	2 cut(s)	991, 1297
BstSCI	CCNGG	7 cut(s)	114, 441, 554, 1117, 1180, 1312, 1427
BstSFI	CTRYAG	1 cut(s)	999
BstSLI	GKGCMC	2 cut(s)	619, 714
BstV2I	GAAGAC	3 cut(s)	54, 783, 923
BstZI	CGGCCG	1 cut(s)	1183
BsuRI	GGCC	5 cut(s)	119, 712, 932, 947, 1185
BtgI	CCRYGG	2 cut(s)	261, 606
BtsCI	GGATG	6 cut(s)	36, 1051, 1261, 1287, 1362, 1411
BtsIMutI	CAGTG	2 cut(s)	663, 891
BveI	ACCTGC	1 cut(s)	1249
Cac8I	GCNNGC	4 cut(s)	121, 541, 642, 1371
CaiI	CAGNNNCTG	1 cut(s)	678
CfoI	GCGC	1 cut(s)	957
Cfr10I	RCCGGY	3 cut(s)	521, 539, 928
Cfr13I	GGNCC	3 cut(s)	66, 710, 711
CseI	GACGC	2 cut(s)	59, 1020
CsiI	ACCWGGT	1 cut(s)	1312
Csp6I	GTAC	3 cut(s)	151, 1004, 1466
CviAII	CATG	7 cut(s)	10, 133, 262, 607, 943, 988, 1294
CviQI	GTAC	3 cut(s)	151, 1004, 1466
DdeI	CTNAG	5 cut(s)	464, 582, 992, 1419, 1449
DinI	GGCGCC	1 cut(s)	956
DpnI	GATC	1 cut(s)	1379
DpnII	GATC	1 cut(s)	1377
DraI	TTTAAA	1 cut(s)	279
DriI	GACNNNNNGTC	1 cut(s)	784
EaeI	YGGCCR	4 cut(s)	117, 930, 945, 1183
EagI	CGGCCG	1 cut(s)	1183
Eam1104I	CTCTTC	4 cut(s)	220, 322, 743, 1129
Eam1105I	GACNNNNNGTC	1 cut(s)	784
EarI	CTCTTC	4 cut(s)	220, 322, 743, 1129
Ecl136II	GAGCTC	3 cut(s)	376, 1201, 1280
EclXI	CGGCCG	1 cut(s)	1183
Eco130I	CCWWGG	4 cut(s)	261, 606, 1341, 1351
Eco24I	GRGCYC	5 cut(s)	102, 378, 714, 1203, 1282
Eco47I	GGWCC	1 cut(s)	66
Eco52I	CGGCCG	1 cut(s)	1183
Eco53kI	GAGCTC	3 cut(s)	376, 1201, 1280
Eco57I	CTGAAG	1 cut(s)	374
EcoICRI	GAGCTC	3 cut(s)	376, 1201, 1280
EcoNI	CCTNNNNNAGG	1 cut(s)	1094
EcoO109I	RGGNCCY	1 cut(s)	710
EcoRII	CCWGG	5 cut(s)	114, 441, 1117, 1312, 1427
EcoT14I	CCWWGG	4 cut(s)	261, 606, 1341, 1351
EcoT38I	GRGCYC	5 cut(s)	102, 378, 714, 1203, 1282
EgeI	GGCGCC	1 cut(s)	956
EheI	GGCGCC	1 cut(s)	956
ErhI	CCWWGG	4 cut(s)	261, 606, 1341, 1351
FaeI	CATG	7 cut(s)	13, 136, 265, 610, 946, 991, 1297
FatI	CATG	7 cut(s)	9, 132, 261, 606, 942, 987, 1293
FbaI	TGATCA	1 cut(s)	1377
FokI	GGATG	6 cut(s)	43, 1058, 1268, 1274, 1349, 1418
FriOI	GRGCYC	5 cut(s)	102, 378, 714, 1203, 1282
FspBI	CTAG	2 cut(s)	789, 1209
GlaI	GCGC	1 cut(s)	956
GsaI	CCCAGC	1 cut(s)	388
HaeII	RGCGCY	1 cut(s)	958
HaeIII	GGCC	5 cut(s)	119, 712, 932, 947, 1185
HapII	CCGG	9 cut(s)	471, 510, 522, 540, 555, 723, 929, 958, 1182
HgaI	GACGC	2 cut(s)	59, 1020
HhaI	GCGC	1 cut(s)	957
Hin1I	GRCGYC	2 cut(s)	955, 1031
Hin1II	CATG	7 cut(s)	13, 136, 265, 610, 946, 991, 1297
Hin6I	GCGC	1 cut(s)	955
HinP1I	GCGC	1 cut(s)	955
HindIII	AAGCTT	1 cut(s)	405
HinfI	GANTC	3 cut(s)	490, 806, 1106
HpaII	CCGG	9 cut(s)	471, 510, 522, 540, 555, 723, 929, 958, 1182
HphI	GGTGA	2 cut(s)	155, 1165
Hpy166II	GTNNAC	1 cut(s)	926
Hpy188I	TCNGA	5 cut(s)	326, 636, 811, 1111, 1263
Hpy188III	TCNNGA	3 cut(s)	379, 1403, 1471
Hpy8I	GTNNAC	1 cut(s)	926
Hpy99I	CGWCG	2 cut(s)	182, 185
HpyAV	CCTTC	4 cut(s)	134, 1071, 1146, 1265
HpyCH4III	ACNGT	1 cut(s)	884
HpyCH4IV	ACGT	1 cut(s)	177
HpyCH4V	TGCA	6 cut(s)	461, 647, 1049, 1115, 1132, 1247
HpyF10VI	GCNNNNNNNGC	7 cut(s)	394, 458, 540, 549, 675, 678, 988
HpyF3I	CTNAG	5 cut(s)	464, 582, 992, 1419, 1449
HpySE526I	ACGT	1 cut(s)	177
Hsp92I	GRCGYC	2 cut(s)	955, 1031
Hsp92II	CATG	7 cut(s)	13, 136, 265, 610, 946, 991, 1297
HspAI	GCGC	1 cut(s)	955
KasI	GGCGCC	1 cut(s)	954
KroI	GCCGGC	1 cut(s)	539
KroNI	GCCGGC	1 cut(s)	541
Ksp22I	TGATCA	1 cut(s)	1377
Kzo9I	GATC	1 cut(s)	1377
LguI	GCTCTTC	1 cut(s)	1129
LmnI	GCTCC	5 cut(s)	557, 1099, 1198, 1206, 1217
LweI	GCATC	2 cut(s)	1036, 1102
MabI	ACCWGGT	1 cut(s)	1312
MaeI	CTAG	2 cut(s)	789, 1209
MaeII	ACGT	1 cut(s)	177
MaeIII	GTNAC	4 cut(s)	143, 567, 716, 889
MalI	GATC	1 cut(s)	1379
MbiI	CCGCTC	1 cut(s)	1463
MboI	GATC	1 cut(s)	1377
MfeI	CAATTG	1 cut(s)	1050
MhlI	GDGCHC	7 cut(s)	102, 378, 565, 619, 714, 1203, 1282
MlsI	TGGCCA	1 cut(s)	119
MluCI	AATT	8 cut(s)	280, 349, 355, 796, 1050, 1144, 1165, 1455
MluNI	TGGCCA	1 cut(s)	119
Mly113I	GGCGCC	1 cut(s)	955
MmeI	TCCRAC	1 cut(s)	243
Mox20I	TGGCCA	1 cut(s)	119
MroNI	GCCGGC	1 cut(s)	539
MscI	TGGCCA	1 cut(s)	119
MseI	TTAA	6 cut(s)	204, 278, 429, 1149, 1284, 1389
MslI	CAYNNNNRTG	1 cut(s)	1292
Msp20I	TGGCCA	1 cut(s)	119
MspA1I	CMGCKG	6 cut(s)	18, 496, 675, 857, 1383, 1481
MspI	CCGG	9 cut(s)	471, 510, 522, 540, 555, 723, 929, 958, 1182
MspR9I	CCNGG	7 cut(s)	116, 443, 556, 1119, 1182, 1314, 1429
MunI	CAATTG	1 cut(s)	1050
MvaI	CCWGG	5 cut(s)	116, 443, 1119, 1314, 1429
MwoI	GCNNNNNNNGC	7 cut(s)	394, 458, 540, 549, 675, 678, 988
NaeI	GCCGGC	1 cut(s)	541
NarI	GGCGCC	1 cut(s)	955
NciI	CCSGG	2 cut(s)	556, 1182
NcoI	CCATGG	2 cut(s)	261, 606
NdeII	GATC	1 cut(s)	1377
NgoMIV	GCCGGC	1 cut(s)	539
NlaIII	CATG	7 cut(s)	13, 136, 265, 610, 946, 991, 1297
NlaIV	GGNNCC	4 cut(s)	475, 711, 712, 956
NmuCI	GTSAC	2 cut(s)	143, 889
NspI	RCATGY	2 cut(s)	991, 1297
NspV	TTCGAA	1 cut(s)	546
PciSI	GCTCTTC	1 cut(s)	1129
PcsI	WCGNNNNNNNCGW	1 cut(s)	543
PdiI	GCCGGC	1 cut(s)	541
PfeI	GAWTC	3 cut(s)	490, 806, 1106
PflFI	GACNNNGTC	1 cut(s)	1314
PfoI	TCCNGGA	1 cut(s)	554
PluTI	GGCGCC	1 cut(s)	958
Psp124BI	GAGCTC	3 cut(s)	378, 1203, 1282
Psp6I	CCWGG	5 cut(s)	114, 441, 1117, 1312, 1427
PspFI	CCCAGC	1 cut(s)	384
PspGI	CCWGG	5 cut(s)	114, 441, 1117, 1312, 1427
PspN4I	GGNNCC	4 cut(s)	475, 711, 712, 956
PspOMI	GGGCCC	1 cut(s)	710
PspPI	GGNCC	3 cut(s)	66, 710, 711
PstNI	CAGNNNCTG	1 cut(s)	678
PsyI	GACNNNGTC	1 cut(s)	1314
PvuII	CAGCTG	3 cut(s)	496, 1383, 1481
RsaI	GTAC	3 cut(s)	152, 1005, 1467
RsaNI	GTAC	3 cut(s)	151, 1004, 1466
RseI	CAYNNNNRTG	1 cut(s)	1292
SacI	GAGCTC	3 cut(s)	378, 1203, 1282
SapI	GCTCTTC	1 cut(s)	1129
SaqAI	TTAA	6 cut(s)	204, 278, 429, 1149, 1284, 1389
Sau3AI	GATC	1 cut(s)	1377
Sau96I	GGNCC	3 cut(s)	66, 710, 711
ScrFI	CCNGG	7 cut(s)	116, 443, 556, 1119, 1182, 1314, 1429
SduI	GDGCHC	7 cut(s)	102, 378, 565, 619, 714, 1203, 1282
SexAI	ACCWGGT	1 cut(s)	1312
SfaNI	GCATC	2 cut(s)	1036, 1102
SfcI	CTRYAG	1 cut(s)	999
SfoI	GGCGCC	1 cut(s)	956
SfuI	TTCGAA	1 cut(s)	546
SgrAI	CRCCGGYG	1 cut(s)	521
SinI	GGWCC	1 cut(s)	66
SmiMI	CAYNNNNRTG	1 cut(s)	1292
Sse9I	AATT	8 cut(s)	280, 349, 355, 796, 1050, 1144, 1165, 1455
SsiI	CCGC	9 cut(s)	18, 21, 243, 519, 675, 821, 855, 1291, 1463
SspDI	GGCGCC	1 cut(s)	954
SspMI	CTAG	2 cut(s)	789, 1209
SstI	GAGCTC	3 cut(s)	378, 1203, 1282
StyD4I	CCNGG	7 cut(s)	114, 441, 554, 1117, 1180, 1312, 1427
StyI	CCWWGG	4 cut(s)	261, 606, 1341, 1351
TaaI	ACNGT	1 cut(s)	884
TaiI	ACGT	1 cut(s)	180
TaqI	TCGA	3 cut(s)	342, 488, 546
TasI	AATT	8 cut(s)	280, 349, 355, 796, 1050, 1144, 1165, 1455
TauI	GCSGC	4 cut(s)	21, 24, 678, 857
TfiI	GAWTC	3 cut(s)	490, 806, 1106
Tru1I	TTAA	6 cut(s)	204, 278, 429, 1149, 1284, 1389
Tru9I	TTAA	6 cut(s)	204, 278, 429, 1149, 1284, 1389
TscAI	CASTG	2 cut(s)	670, 898
TseFI	GTSAC	2 cut(s)	143, 889
Tsp45I	GTSAC	2 cut(s)	143, 889
TspDTI	ATGAA	4 cut(s)	47, 105, 417, 428
TspGWI	ACGGA	2 cut(s)	246, 1193
TspRI	CASTG	2 cut(s)	670, 898
Tth111I	GACNNNGTC	1 cut(s)	1314
VpaK11BI	GGWCC	1 cut(s)	66
XagI	CCTNNNNNAGG	1 cut(s)	1094
XapI	RAATTY	4 cut(s)	280, 796, 1144, 1165
XceI	RCATGY	2 cut(s)	991, 1297
XcmI	CCANNNNNNNNNTGG	2 cut(s)	662, 940
XspI	CTAG	2 cut(s)	789, 1209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.