Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0001985

Physical Location & Seq

Genomic Coordinates Reverse (-)

488030 .. 491435

Gene Structure 3406 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1007400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGCTTCCCATGTCCAGCGGCGCCGCTTGTATGGGCGGAGACGAACACGACGCAGCGTCTTGGACCAGAAACAATAATAACAATGAGGCAGAACCCAGAAGAAACGACCAAGATTCGAGCTTGGGAGTTTCTTTTTCAAACGTCAAATTAATGCTGGAAGGTGACTGGTACACGAACAACATTCTCAGCAACCCAGCTCAAGACCTCCATACCTTCTCTTCCACCCAAGCTTCTGAAACTACATTTGCTCCTCTGCAACCAAACGACTCCTCCGCCTCCTGTTCTCCGTCGCAGGCATTCTCTATCGACTCTTCACAGCCGTCACAGCAGTTTTTGCCTCCAAAATCCTGCTTCTCCTCTCTCCTCAACGTCGTCTGCTCCAACCCTCTTGATAGCAGCTTCGACCTGGGCTGCGACGCTGGGTTTCTGGGCTCCTTTCAGGGAAATCAGCCTTCCAAGTCCTCTCTTCTGATGGGTTTCACGGCTCTCAATTCTCACTCTCAGATGGGTACTCCCGAGTTCAGTTCGAGCGCCGAGTTTCCGGCGAGTCGGTTGCTGCCAGTGACCGACAACGCCAATATACTCGACGGCGACTTTGGCTTCGAAGGCTTCGATGGCTCCGCCGGTGCTCAGCTGCTGAACGGGGCTAAGCTCCTGTTCCCTCCCATGGGTGCTCAGCCCACTCTTTTCCAGAAGCGCCGCCAAAACTCTGGCGGTGATGGGGCTGATAAATTGGGGAATTTGGAGATTTCGGCCCCCAGATACGGAGGACTAGTGGAGAATTTGGAGAAGAAGAGGGGGAACGACGAGGGTGAGGTGGAGGAAGAGAGTCTGGATGTGTCTGGTTTGAATTATGACTCGAACGATTTTAATGAGCACAGTCAAGTGGAGGTGGAGGACAATGCGAAGAATGGTGGAAACAATTCGAATGCCAACTGCACTGTCACCGGAGTAGAGGGAGGTGACCGCAAGGGCAAGAAGAAGGGTTTGCCGGCCAAAAATCTGATGGCGGAGAGAAGGCGGAGGAAGAAGCTCAATGACAGGCTCTACATGCTTAGGTCTGTTGTACCCAAGATAAGCAAGATGGATAGGGCGTCCATACTAGGGGATGCAATTGATTATTTGAAAGAACTTCTACAAAGGATCAATGACCTCCATAACGAGCTGGATTCAGCTCCACCTAGCTCTTTGCTGCCACCTTCAACAAGCTTTCATCCGTTGACACCCCCTCCATCCACCCTTCCCTGCCGTGTCAAAGAAGAGCTCTGCCCAAGCTCCTTGCCTAGCCCCAAAACTCAACCGAAGGTGGAGGTTCGGGTAAGGGAAGGGCGAACTGTTAACATCCACATGTTCTGTGCTCGGAGACCAGGTCTCTTTCTCTCGACCATGAGGGCCTTGGATAACCTTGATTTGGACATCCAGCAGGCTGTGATCAGCTGCTTCAATGGGTTTGCTTTAGACGTGTTCCGTGCTGAGCAATGCATGGAAAACCAGTTCTTGCCAGAGCAAATAAAAGCACTACTTTTGGATTCAGCTGGATTTCATAATATGATGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

520

Amino Acids

56.47

Weight (kDa)

5.07

Isoelectric Point (pI)

58.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH_SAC51	PF23173	335 - 383	9.7e-08	Transcription factor SAC51 bHLH domain
HLH	PF00010	336 - 378	1.9e-09	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	436 - 500	1.7e-10	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12860 AT1G12860 AT1G12860 AT3G26744 AT3G26744 AT3G26744 AT3G26744 AT3G26744
fragaria_vesca	FvH4_5g09300 FvH4_5g09300
malus_domestica	MD06G1132200.v1.1 MD09G1003800.v1.1 MD14G1148600.v1.1 MD17G1007400.v1.1
prunus_persica	Prupe.3G312800_v2.0.a1 Prupe.3G312800_v2.0.a1 Prupe.5G143200_v2.0.a1
pyrus_communis	pycom06g12380 pycom111g00280 pycom14g12340 pycom17g00300
rosa_chinensis	RchiOBHm_Chr2g0176421 RchiOBHm_Chr7g0188921
rosa_laevigata	RLG00000004651 RLG00000022412
rosa_multiflora	Rmu_co8326225.1_g000001 Rmu_co8487291.1_g000001 Rmu_sc0009140.1_g000010 Rmu_sc0011904.1_g000015 Rmu_ssc0000113.1_g000008
rosa_roxburghii	Rroxscaffold_2G00076450 Rroxscaffold_3G00265940
rosa_rugosa	Rorug02G0594200 Rorug02G0594200 Rorug06G0494600
rosa_samantha	Rh2AG672700 Rh2BG684200 Rh2CG647000 Rh2DG697800 Rh7AG099500 Rh7BG101600 Rh7CG102900 Rh7DG101300
rosa_wichuraiana	Rw2G055180 Rw7G008570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	20
AclWI	GGATC	1 cut(s)	1151
AcoI	YGGCCR	1 cut(s)	993
AcsI	RAATTY	2 cut(s)	739, 781
AcyI	GRCGYC	2 cut(s)	21, 1094
AfaI	GTAC	3 cut(s)	170, 511, 1068
AfiI	CCNNNNNNNGG	5 cut(s)	667, 668, 764, 1104, 1411
AflIII	ACRYGT	2 cut(s)	1347, 1461
AgsI	TTSAA	5 cut(s)	138, 850, 1126, 1203, 1444
AhdI	GACNNNNNGTC	1 cut(s)	55
AhlI	ACTAGT	1 cut(s)	772
AjiI	CACGTC	1 cut(s)	1462
AjnI	CCWGG	2 cut(s)	405, 1366
AloI	GAACNNNNNNTCC	2 cut(s)	1478, 1510
Alw21I	GWGCWC	5 cut(s)	631, 676, 879, 1266, 1360
Alw26I	GTCTC	3 cut(s)	33, 1357, 1376
AlwI	GGATC	1 cut(s)	1151
AlwNI	CAGNNNCTG	1 cut(s)	637
Ama87I	CYCGRG	1 cut(s)	515
AoxI	GGCC	3 cut(s)	753, 993, 1392
ApeKI	GCWGC	7 cut(s)	53, 396, 411, 556, 634, 1192, 1437
ApoI	RAATTY	2 cut(s)	739, 781
ArsI	GACNNNNNNTTYG	4 cut(s)	578, 584, 610, 616
AseI	ATTAAT	1 cut(s)	149
Asp700I	GAANNNNTTC	1 cut(s)	922
AspLEI	GCGC	3 cut(s)	23, 533, 699
AspS9I	GGNCC	3 cut(s)	63, 754, 1392
AsuHPI	GGTGA	5 cut(s)	173, 728, 824, 937, 974
AsuII	TTCGAA	2 cut(s)	603, 926
AvaI	CYCGRG	1 cut(s)	515
AvaII	GGWCC	1 cut(s)	63
BanI	GGYRCC	1 cut(s)	20
BanII	GRGCYC	2 cut(s)	434, 1266
Bbv12I	GWGCWC	5 cut(s)	631, 676, 879, 1266, 1360
BbvI	GCAGC	7 cut(s)	65, 398, 408, 543, 621, 1179, 1424
BccI	CCATC	7 cut(s)	466, 499, 608, 713, 1000, 1078, 1240
BceAI	ACGGC	4 cut(s)	304, 498, 604, 1233
BcgI	CGANNNNNNTGC	2 cut(s)	535, 569
BciT130I	CCWGG	2 cut(s)	407, 1368
BclI	TGATCA	1 cut(s)	1431
BcoDI	GTCTC	3 cut(s)	33, 1357, 1376
BcuI	ACTAGT	1 cut(s)	772
BfaI	CTAG	4 cut(s)	773, 1103, 1182, 1284
BfoI	RGCGCY	3 cut(s)	24, 534, 700
BlpI	GCTNAGC	4 cut(s)	630, 648, 675, 1473
Bme1390I	CCNGG	2 cut(s)	407, 1368
Bme18I	GGWCC	1 cut(s)	63
BmeRI	GACNNNNNGTC	1 cut(s)	55
BmeT110I	CYCGRG	1 cut(s)	515
BmgBI	CACGTC	1 cut(s)	1462
BmgT120I	GGNCC	3 cut(s)	63, 754, 1392
BmiI	GGNNCC	4 cut(s)	22, 433, 619, 756
BmrFI	CCNGG	2 cut(s)	407, 1368
BmsI	GCATC	1 cut(s)	1099
Bpu10I	CCTNAGC	1 cut(s)	1055
Bpu1102I	GCTNAGC	4 cut(s)	630, 648, 675, 1473
Bpu14I	TTCGAA	2 cut(s)	603, 926
BpuEI	CTTGAG	1 cut(s)	183
BsaHI	GRCGYC	2 cut(s)	21, 1094
BsaI	GGTCTC	2 cut(s)	1357, 1376
BsaJI	CCNNGG	3 cut(s)	406, 666, 1395
BsaWI	WCCGGW	1 cut(s)	947
Bsc4I	CCNNNNNNNGG	5 cut(s)	667, 668, 764, 1104, 1411
Bse118I	RCCGGY	2 cut(s)	623, 991
Bse1I	ACTGG	3 cut(s)	170, 560, 1492
Bse3DI	GCAATG	1 cut(s)	1484
BseBI	CCWGG	2 cut(s)	407, 1368
BseDI	CCNNGG	3 cut(s)	406, 666, 1395
BseGI	GGATG	6 cut(s)	841, 1114, 1213, 1232, 1341, 1416
BseLI	CCNNNNNNNGG	5 cut(s)	667, 668, 764, 1104, 1411
BseMI	GCAATG	1 cut(s)	1484
BseMII	CTCAG	5 cut(s)	199, 515, 644, 689, 1464
BseNI	ACTGG	3 cut(s)	170, 560, 1492
BseRI	GAGGAG	4 cut(s)	240, 259, 346, 353
BseXI	GCAGC	7 cut(s)	65, 398, 408, 543, 621, 1179, 1424
BseYI	CCCAGC	2 cut(s)	193, 419
BsgI	GTGCAG	1 cut(s)	922
BshFI	GGCC	3 cut(s)	755, 995, 1394
BshNI	GGYRCC	1 cut(s)	20
BsiHKAI	GWGCWC	5 cut(s)	631, 676, 879, 1266, 1360
BsiHKCI	CYCGRG	1 cut(s)	515
BsiSI	CCGG	4 cut(s)	542, 624, 948, 992
BslI	CCNNNNNNNGG	5 cut(s)	667, 668, 764, 1104, 1411
BsmAI	GTCTC	3 cut(s)	33, 1357, 1376
BsmBI	CGTCTC	1 cut(s)	33
BsmI	GAATGC	2 cut(s)	296, 934
BsnI	GGCC	3 cut(s)	755, 995, 1394
Bso31I	GGTCTC	2 cut(s)	1357, 1376
BsoBI	CYCGRG	1 cut(s)	515
Bsp119I	TTCGAA	2 cut(s)	603, 926
Bsp1286I	GDGCHC	6 cut(s)	434, 631, 676, 879, 1266, 1360
Bsp143I	GATC	2 cut(s)	1143, 1431
Bsp1720I	GCTNAGC	4 cut(s)	630, 648, 675, 1473
Bsp19I	CCATGG	1 cut(s)	666
BspANI	GGCC	3 cut(s)	755, 995, 1394
BspCNI	CTCAG	5 cut(s)	198, 514, 643, 688, 1465
BspLI	GGNNCC	4 cut(s)	22, 433, 619, 756
BspPI	GGATC	1 cut(s)	1151
BspQI	GCTCTTC	1 cut(s)	1254
BspT104I	TTCGAA	2 cut(s)	603, 926
BspT107I	GGYRCC	1 cut(s)	20
BspTNI	GGTCTC	2 cut(s)	1357, 1376
BsrDI	GCAATG	1 cut(s)	1484
BsrFI	RCCGGY	2 cut(s)	623, 991
BsrI	ACTGG	3 cut(s)	170, 560, 1492
BssAI	RCCGGY	2 cut(s)	623, 991
BssECI	CCNNGG	3 cut(s)	406, 666, 1395
BssMI	GATC	2 cut(s)	1143, 1431
BssNI	GRCGYC	2 cut(s)	21, 1094
BssT1I	CCWWGG	2 cut(s)	666, 1395
Bst2UI	CCWGG	2 cut(s)	407, 1368
Bst4CI	ACNGT	3 cut(s)	881, 943, 1336
Bst6I	CTCTTC	6 cut(s)	223, 316, 471, 788, 819, 1254
BstACI	GRCGYC	2 cut(s)	21, 1094
BstAPI	GCANNNNNTGC	1 cut(s)	334
BstBI	TTCGAA	2 cut(s)	603, 926
BstC8I	GCNNGC	3 cut(s)	294, 993, 1425
BstDEI	CTNAG	7 cut(s)	185, 501, 630, 648, 675, 1055, 1473
BstDSI	CCRYGG	1 cut(s)	666
BstEII	GGTNACC	1 cut(s)	962
BstF5I	GGATG	6 cut(s)	841, 1114, 1213, 1232, 1341, 1416
BstH2I	RGCGCY	3 cut(s)	24, 534, 700
BstHHI	GCGC	3 cut(s)	23, 533, 699
BstKTI	GATC	2 cut(s)	1146, 1434
BstMAI	GTCTC	3 cut(s)	33, 1357, 1376
BstMBI	GATC	2 cut(s)	1143, 1431
BstMWI	GCNNNNNNNGC	6 cut(s)	325, 334, 597, 606, 615, 1051
BstNI	CCWGG	2 cut(s)	407, 1368
BstNSI	RCATGY	2 cut(s)	1054, 1351
BstPI	GGTNACC	1 cut(s)	962
BstSCI	CCNGG	2 cut(s)	405, 1366
BstV1I	GCAGC	7 cut(s)	65, 398, 408, 543, 621, 1179, 1424
BstXI	CCANNNNNNTGG	1 cut(s)	710
BsuRI	GGCC	3 cut(s)	755, 995, 1394
BtgI	CCRYGG	1 cut(s)	666
BtrI	CACGTC	1 cut(s)	1462
BtsCI	GGATG	6 cut(s)	841, 1114, 1213, 1232, 1341, 1416
BtsIMutI	CAGTG	2 cut(s)	567, 939
Cac8I	GCNNGC	3 cut(s)	294, 993, 1425
CaiI	CAGNNNCTG	1 cut(s)	637
CfoI	GCGC	3 cut(s)	23, 533, 699
Cfr10I	RCCGGY	2 cut(s)	623, 991
Cfr13I	GGNCC	3 cut(s)	63, 754, 1392
CseI	GACGC	4 cut(s)	45, 59, 425, 1083
CsiI	ACCWGGT	1 cut(s)	1366
Csp6I	GTAC	3 cut(s)	169, 510, 1067
CviAII	CATG	6 cut(s)	10, 667, 1051, 1348, 1387, 1483
CviQI	GTAC	3 cut(s)	169, 510, 1067
DdeI	CTNAG	7 cut(s)	185, 501, 630, 648, 675, 1055, 1473
DinI	GGCGCC	1 cut(s)	22
DpnI	GATC	2 cut(s)	1145, 1433
DpnII	GATC	2 cut(s)	1143, 1431
DriI	GACNNNNNGTC	1 cut(s)	55
EaeI	YGGCCR	1 cut(s)	993
Eam1104I	CTCTTC	6 cut(s)	223, 316, 471, 788, 819, 1254
Eam1105I	GACNNNNNGTC	1 cut(s)	55
EarI	CTCTTC	6 cut(s)	223, 316, 471, 788, 819, 1254
EciI	GGCGGA	5 cut(s)	51, 262, 610, 1025, 1036
Ecl136II	GAGCTC	1 cut(s)	1264
Eco130I	CCWWGG	2 cut(s)	666, 1395
Eco24I	GRGCYC	2 cut(s)	434, 1266
Eco31I	GGTCTC	2 cut(s)	1357, 1376
Eco47I	GGWCC	1 cut(s)	63
Eco53kI	GAGCTC	1 cut(s)	1264
Eco88I	CYCGRG	1 cut(s)	515
Eco91I	GGTNACC	1 cut(s)	962
EcoICRI	GAGCTC	1 cut(s)	1264
EcoO109I	RGGNCCY	1 cut(s)	1392
EcoO65I	GGTNACC	1 cut(s)	962
EcoRII	CCWGG	2 cut(s)	405, 1366
EcoT14I	CCWWGG	2 cut(s)	666, 1395
EcoT22I	ATGCAT	1 cut(s)	1484
EcoT38I	GRGCYC	2 cut(s)	434, 1266
EgeI	GGCGCC	1 cut(s)	22
EheI	GGCGCC	1 cut(s)	22
ErhI	CCWWGG	2 cut(s)	666, 1395
Esp3I	CGTCTC	1 cut(s)	33
FaeI	CATG	6 cut(s)	13, 670, 1054, 1351, 1390, 1486
FalI	AAGNNNNNCTT	2 cut(s)	1506, 1538
FatI	CATG	6 cut(s)	9, 666, 1050, 1347, 1386, 1482
FbaI	TGATCA	1 cut(s)	1431
FokI	GGATG	6 cut(s)	848, 1121, 1200, 1219, 1328, 1403
FriOI	GRGCYC	2 cut(s)	434, 1266
FspBI	CTAG	4 cut(s)	773, 1103, 1182, 1284
GlaI	GCGC	3 cut(s)	22, 532, 698
GsaI	CCCAGC	2 cut(s)	197, 423
HaeII	RGCGCY	3 cut(s)	24, 534, 700
HaeIII	GGCC	3 cut(s)	755, 995, 1394
HapII	CCGG	4 cut(s)	542, 624, 948, 992
HgaI	GACGC	4 cut(s)	45, 59, 425, 1083
HhaI	GCGC	3 cut(s)	23, 533, 699
Hin1I	GRCGYC	2 cut(s)	21, 1094
Hin1II	CATG	6 cut(s)	13, 670, 1054, 1351, 1390, 1486
Hin6I	GCGC	3 cut(s)	21, 531, 697
HinP1I	GCGC	3 cut(s)	21, 531, 697
HincII	GTYRAC	2 cut(s)	1221, 1339
HindII	GTYRAC	2 cut(s)	1221, 1339
HindIII	AAGCTT	2 cut(s)	228, 1207
HinfI	GANTC	8 cut(s)	113, 266, 308, 547, 829, 857, 1169, 1529
HpaI	GTTAAC	1 cut(s)	1339
HpaII	CCGG	4 cut(s)	542, 624, 948, 992
HphI	GGTGA	5 cut(s)	173, 728, 824, 937, 974
Hpy166II	GTNNAC	3 cut(s)	171, 1221, 1339
Hpy188I	TCNGA	5 cut(s)	235, 471, 504, 1005, 1362
Hpy188III	TCNNGA	6 cut(s)	200, 389, 515, 691, 833, 1381
Hpy8I	GTNNAC	3 cut(s)	171, 1221, 1339
Hpy99I	CGWCG	6 cut(s)	53, 292, 374, 419, 590, 809
HpyCH4III	ACNGT	3 cut(s)	881, 943, 1336
HpyCH4IV	ACGT	3 cut(s)	141, 369, 1461
HpyCH4V	TGCA	4 cut(s)	256, 939, 1112, 1482
HpyF10VI	GCNNNNNNNGC	6 cut(s)	325, 334, 597, 606, 615, 1051
HpyF3I	CTNAG	7 cut(s)	185, 501, 630, 648, 675, 1055, 1473
HpySE526I	ACGT	3 cut(s)	141, 369, 1461
Hsp92I	GRCGYC	2 cut(s)	21, 1094
Hsp92II	CATG	6 cut(s)	13, 670, 1054, 1351, 1390, 1486
HspAI	GCGC	3 cut(s)	21, 531, 697
KasI	GGCGCC	1 cut(s)	20
KroI	GCCGGC	1 cut(s)	991
KroNI	GCCGGC	1 cut(s)	993
Ksp22I	TGATCA	1 cut(s)	1431
KspAI	GTTAAC	1 cut(s)	1339
Kzo9I	GATC	2 cut(s)	1143, 1431
LguI	GCTCTTC	1 cut(s)	1254
LmnI	GCTCC	7 cut(s)	253, 383, 437, 623, 657, 1180, 1280
Lsp1109I	GCAGC	7 cut(s)	65, 398, 408, 543, 621, 1179, 1424
LweI	GCATC	1 cut(s)	1099
MabI	ACCWGGT	1 cut(s)	1366
MaeI	CTAG	4 cut(s)	773, 1103, 1182, 1284
MaeII	ACGT	3 cut(s)	141, 369, 1461
MaeIII	GTNAC	5 cut(s)	161, 321, 562, 943, 962
MalI	GATC	2 cut(s)	1145, 1433
MboI	GATC	2 cut(s)	1143, 1431
MfeI	CAATTG	1 cut(s)	1113
MhlI	GDGCHC	6 cut(s)	434, 631, 676, 879, 1266, 1360
MluCI	AATT	8 cut(s)	146, 490, 731, 739, 781, 850, 922, 1113
Mly113I	GGCGCC	1 cut(s)	21
MlyI	GAGTC	5 cut(s)	260, 302, 556, 838, 851
MmeI	TCCRAC	1 cut(s)	405
Mph1103I	ATGCAT	1 cut(s)	1484
MroNI	GCCGGC	1 cut(s)	991
MroXI	GAANNNNTTC	1 cut(s)	922
MseI	TTAA	3 cut(s)	149, 870, 1338
MslI	CAYNNNNRTG	1 cut(s)	1346
MspA1I	CMGCKG	4 cut(s)	18, 634, 1437, 1535
MspI	CCGG	4 cut(s)	542, 624, 948, 992
MspR9I	CCNGG	2 cut(s)	407, 1368
MunI	CAATTG	1 cut(s)	1113
Mva1269I	GAATGC	2 cut(s)	296, 934
MvaI	CCWGG	2 cut(s)	407, 1368
MwoI	GCNNNNNNNGC	6 cut(s)	325, 334, 597, 606, 615, 1051
NaeI	GCCGGC	1 cut(s)	993
NarI	GGCGCC	1 cut(s)	21
NcoI	CCATGG	1 cut(s)	666
NdeII	GATC	2 cut(s)	1143, 1431
NgoMIV	GCCGGC	1 cut(s)	991
NlaIII	CATG	6 cut(s)	13, 670, 1054, 1351, 1390, 1486
NlaIV	GGNNCC	4 cut(s)	22, 433, 619, 756
NmeAIII	GCCGAG	1 cut(s)	559
NmuCI	GTSAC	5 cut(s)	161, 321, 562, 943, 962
NsiI	ATGCAT	1 cut(s)	1484
NspI	RCATGY	2 cut(s)	1054, 1351
NspV	TTCGAA	2 cut(s)	603, 926
PciI	ACATGT	1 cut(s)	1347
PciSI	GCTCTTC	1 cut(s)	1254
PcsI	WCGNNNNNNNCGW	1 cut(s)	609
PctI	GAATGC	2 cut(s)	296, 934
PdiI	GCCGGC	1 cut(s)	993
PdmI	GAANNNNTTC	1 cut(s)	922
PfeI	GAWTC	3 cut(s)	113, 1169, 1529
PflFI	GACNNNGTC	1 cut(s)	1368
PleI	GAGTC	5 cut(s)	260, 302, 555, 837, 851
PluTI	GGCGCC	1 cut(s)	24
PpsI	GAGTC	5 cut(s)	260, 302, 555, 837, 851
PscI	ACATGT	1 cut(s)	1347
PshBI	ATTAAT	1 cut(s)	149
Psp124BI	GAGCTC	1 cut(s)	1266
Psp6I	CCWGG	2 cut(s)	405, 1366
PspEI	GGTNACC	1 cut(s)	962
PspFI	CCCAGC	2 cut(s)	193, 419
PspGI	CCWGG	2 cut(s)	405, 1366
PspN4I	GGNNCC	4 cut(s)	22, 433, 619, 756
PspPI	GGNCC	3 cut(s)	63, 754, 1392
PstNI	CAGNNNCTG	1 cut(s)	637
PsyI	GACNNNGTC	1 cut(s)	1368
PvuII	CAGCTG	3 cut(s)	634, 1437, 1535
RsaI	GTAC	3 cut(s)	170, 511, 1068
RsaNI	GTAC	3 cut(s)	169, 510, 1067
RseI	CAYNNNNRTG	1 cut(s)	1346
SacI	GAGCTC	1 cut(s)	1266
SapI	GCTCTTC	1 cut(s)	1254
SaqAI	TTAA	3 cut(s)	149, 870, 1338
Sau3AI	GATC	2 cut(s)	1143, 1431
Sau96I	GGNCC	3 cut(s)	63, 754, 1392
SchI	GAGTC	5 cut(s)	260, 302, 556, 838, 851
ScrFI	CCNGG	2 cut(s)	407, 1368
SduI	GDGCHC	6 cut(s)	434, 631, 676, 879, 1266, 1360
SexAI	ACCWGGT	1 cut(s)	1366
SfaNI	GCATC	1 cut(s)	1099
SfoI	GGCGCC	1 cut(s)	22
SfuI	TTCGAA	2 cut(s)	603, 926
SgrAI	CRCCGGYG	1 cut(s)	623
SinI	GGWCC	1 cut(s)	63
SmiMI	CAYNNNNRTG	1 cut(s)	1346
SmlI	CTYRAG	1 cut(s)	198
SmoI	CTYRAG	1 cut(s)	198
SpeI	ACTAGT	1 cut(s)	772
Sse9I	AATT	8 cut(s)	146, 490, 731, 739, 781, 850, 922, 1113
SspDI	GGCGCC	1 cut(s)	20
SspMI	CTAG	4 cut(s)	773, 1103, 1182, 1284
SstI	GAGCTC	1 cut(s)	1266
StyD4I	CCNGG	2 cut(s)	405, 1366
StyI	CCWWGG	2 cut(s)	666, 1395
TaaI	ACNGT	3 cut(s)	881, 943, 1336
TaiI	ACGT	3 cut(s)	144, 372, 1464
TaqII	GACCGA	1 cut(s)	581
TasI	AATT	8 cut(s)	146, 490, 731, 739, 781, 850, 922, 1113
TauI	GCSGC	3 cut(s)	21, 26, 702
TfiI	GAWTC	3 cut(s)	113, 1169, 1529
Tru1I	TTAA	3 cut(s)	149, 870, 1338
Tru9I	TTAA	3 cut(s)	149, 870, 1338
TscAI	CASTG	2 cut(s)	567, 946
TseFI	GTSAC	5 cut(s)	161, 321, 562, 943, 962
TseI	GCWGC	7 cut(s)	53, 396, 411, 556, 634, 1192, 1437
Tsp45I	GTSAC	5 cut(s)	161, 321, 562, 943, 962
TspDTI	ATGAA	2 cut(s)	1202, 1532
TspGWI	ACGGA	4 cut(s)	276, 780, 1206, 1457
TspRI	CASTG	2 cut(s)	567, 946
Tth111I	GACNNNGTC	1 cut(s)	1368
VpaK11BI	GGWCC	1 cut(s)	63
VspI	ATTAAT	1 cut(s)	149
XapI	RAATTY	2 cut(s)	739, 781
XceI	RCATGY	2 cut(s)	1054, 1351
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1003, 1393
XmnI	GAANNNNTTC	1 cut(s)	922
XspI	CTAG	4 cut(s)	773, 1103, 1182, 1284
Zsp2I	ATGCAT	1 cut(s)	1484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.