Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001985

Physical Location & Seq

Genomic Coordinates Reverse (-)

7843079 .. 7846361

Gene Structure 3283 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G008570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGCTGCCGAGGCTCAATGGGGTTGTTTGGATGGAGAGGGAGGACAGAGACGCCGGCGAGTGGGCCAGAACCGCCGCGGCGGCCGGCGCCGGGAACAGCAAGGACGAGATGGGTTCTCTGTCGAATTTCAAATCCATGCTGGAGGTTGAAGATGAGTGGACGTACATGAACAACAATGGCATTCAGGGCCATTCTGACGTCAGAGACTTGACGTTCTCGCCCAGCTTTGCTGACCCAGAAAGCTTGCTGCTCAACCAAGTGGACTCTTCGTCTTCTTGTTCTCCATCTTCCTCTGTTTTCAACAACCTCGACCCGTCTCAGGTTCACTACTACCTGCCTCAGAACCCATCGTTGTCTTCTCTGCTCAATGCTGTGCCTAACAACCCTCTGGACCATGGCTTTGATTTGGGCTGTGAAATTGGGTTTCTTGACAACCAAGGCTCCGGTGGTGGTTCGAGTTTGATGAACAGGGGAGGTGGGGTTTTAACCGGGTTCAATGATTTGAGCTCCAACACCCACATGCAGGCTCAGAATCTGTGCTCCAATTTGCAATTCTCAACCACCCGTTTGCCTCATTTGCTTGAGAATGGTAATAATTTTTCGGGTTTTCGGGGTGTTGATGATACTTCAGGCAATGCTTTGTTTAGCAATAGGTCCAAAATGTTGAGACCCCTTCAGCCCTTATCTTCTGTGGGAGCACAGCCGACTCTTTTTCAGAAAAGGGCGGCGCTGCGGAAGAATTTGGGTGGACTGGGATCCGAGGGGGGACTGGTCTTGAGTAACTATGAAGGGGATAAGGGGAAGAGGGACATGGGGGAAGAGAATGAGAAGAAGAGGAAGTTTAGTGGTGGAGATGATGGCGAAGATTTGAGTTTCGATGGCTCGGGTTTGAACTATGATTCAGATGAGTTTACTGAGAATACTAAGATGGATGAGAATGCCAAGAATGGTGGCAATAGCTCCAATGCTAATAGTACTGTTACTGGTGGGGAGCACAAGGGGAAGAAGAAAGGGTTGCCTGCTAAGAATCTGATGGCTGAGAGGCGCCGCCGGAAGAAGCTCAATGATCGGCTGTATATGCTGAGATCCGTTGTTCCAAAGATCAGCAAAATGGATAGGGCTTCTATCCTTGGGGATGCAATTGAGTACTTGAAAGAACTTCTGCAGAGGATCAACAACCTCCATAACGAATTGGAGTCGCTCCCTCCCGGGTCTGCATTGACACCTACCGCAAGTACTTTTCATCCTTTGACACCCACTCCACCTACTCTGCCTAGCCGTATTAAGGAAGAGCTTTGCCCCAGCTTACCTAGCCCGAATGGCCAACCTGCAAGGGTTGAAGTAAGGCTACGAGAAGGCAGAGCTGTGAACATCCACATGTTCTGTGGCAGAAGACCTGGTCTCTTGCTCTCCACTATGAGGGCTGTAGATAATCTTGGTTTAGACATCCAGCAAGCCGTCATTAGCTGCTTCAATGGGTTTGCCATGGATATATTCCGGGCTGAGCAATGCAAGGAAGGTCAAGACGTCCACCCTGAGCATATAAAGGCAGTACTTTTGGATTCAGCTGGGTTCCATGGCATGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

529

Amino Acids

57.6

Weight (kDa)

5.9

Isoelectric Point (pI)

46.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH_SAC51	PF23173	344 - 393	2.5e-07	Transcription factor SAC51 bHLH domain
HLH	PF00010	345 - 387	2.5e-09	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	446 - 519	1.7e-11	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12860 AT1G12860 AT1G12860 AT3G26744 AT3G26744 AT3G26744 AT3G26744 AT3G26744
fragaria_vesca	FvH4_5g09300 FvH4_5g09300
malus_domestica	MD06G1132200.v1.1 MD09G1003800.v1.1 MD14G1148600.v1.1 MD17G1007400.v1.1
prunus_persica	Prupe.3G312800_v2.0.a1 Prupe.3G312800_v2.0.a1 Prupe.5G143200_v2.0.a1
pyrus_communis	pycom06g12380 pycom111g00280 pycom14g12340 pycom17g00300
rosa_chinensis	RchiOBHm_Chr2g0176421 RchiOBHm_Chr7g0188921
rosa_laevigata	RLG00000004651 RLG00000022412
rosa_multiflora	Rmu_co8326225.1_g000001 Rmu_co8487291.1_g000001 Rmu_sc0009140.1_g000010 Rmu_sc0011904.1_g000015 Rmu_ssc0000113.1_g000008
rosa_roxburghii	Rroxscaffold_2G00076450 Rroxscaffold_3G00265940
rosa_rugosa	Rorug02G0594200 Rorug02G0594200 Rorug06G0494600
rosa_samantha	Rh2AG672700 Rh2BG684200 Rh2CG647000 Rh2DG697800 Rh7AG099500 Rh7BG101600 Rh7CG102900 Rh7DG101300
rosa_wichuraiana	Rw2G055180 Rw7G008570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	201, 1530
Acc36I	ACCTGC	2 cut(s)	342, 1336
AccB1I	GGYRCC	2 cut(s)	86, 1044
AccII	CGCG	1 cut(s)	77
AciI	CCGC	8 cut(s)	72, 75, 77, 80, 725, 733, 1048, 1230
AclWI	GGATC	4 cut(s)	750, 763, 1080, 1178
AcoI	YGGCCR	2 cut(s)	81, 1321
AcsI	RAATTY	2 cut(s)	124, 739
AcuI	CTGAAG	2 cut(s)	612, 659
AcyI	GRCGYC	5 cut(s)	51, 87, 198, 1045, 1527
AfaI	GTAC	5 cut(s)	164, 976, 1148, 1237, 1554
AfiI	CCNNNNNNNGG	6 cut(s)	60, 90, 319, 523, 1285, 1419
AflIII	ACRYGT	1 cut(s)	1377
AgsI	TTSAA	8 cut(s)	130, 149, 301, 496, 892, 1153, 1340, 1474
AhdI	GACNNNNNGTC	1 cut(s)	268
AjnI	CCWGG	1 cut(s)	1396
AjuI	GAANNNNNNNTTGG	2 cut(s)	536, 568
Alw21I	GWGCWC	4 cut(s)	509, 542, 700, 996
Alw26I	GTCTC	5 cut(s)	42, 198, 321, 661, 1406
AlwI	GGATC	4 cut(s)	750, 763, 1080, 1178
AlwNI	CAGNNNCTG	1 cut(s)	535
Ama87I	CYCGRG	2 cut(s)	883, 1208
AoxI	GGCC	4 cut(s)	63, 81, 187, 1321
ApeKI	GCWGC	4 cut(s)	4, 247, 730, 1467
ApoI	RAATTY	2 cut(s)	124, 739
ArsI	GACNNNNNNTTYG	2 cut(s)	383, 415
AspLEI	GCGC	3 cut(s)	89, 730, 1047
AspS9I	GGNCC	4 cut(s)	63, 187, 391, 654
AsuC2I	CCSGG	5 cut(s)	91, 490, 1209, 1210, 1499
AvaI	CYCGRG	2 cut(s)	883, 1208
AvaII	GGWCC	2 cut(s)	391, 654
BalI	TGGCCA	1 cut(s)	1323
BamHI	GGATCC	1 cut(s)	755
BanI	GGYRCC	2 cut(s)	86, 1044
BanII	GRGCYC	1 cut(s)	509
BarI	GAAGNNNNNNTAC	2 cut(s)	1332, 1364
BbsI	GAAGAC	3 cut(s)	264, 348, 1399
Bbv12I	GWGCWC	4 cut(s)	509, 542, 700, 996
BbvI	GCAGC	3 cut(s)	234, 717, 1454
BccI	CCATC	8 cut(s)	25, 103, 292, 355, 851, 872, 922, 1027
BceAI	ACGGC	2 cut(s)	1263, 1442
BciT130I	CCWGG	1 cut(s)	1398
BcnI	CCSGG	5 cut(s)	91, 490, 1209, 1210, 1499
BcoDI	GTCTC	5 cut(s)	42, 198, 321, 661, 1406
BfaI	CTAG	2 cut(s)	1275, 1311
BfmI	CTRYAG	2 cut(s)	1163, 1425
BfoI	RGCGCY	3 cut(s)	90, 731, 1048
BfuAI	ACCTGC	2 cut(s)	342, 1336
BglI	GCCNNNNNGGC	2 cut(s)	80, 1320
BisI	GCNGC	9 cut(s)	5, 75, 78, 81, 248, 726, 731, 1048, 1468
BlpI	GCTNAGC	1 cut(s)	1503
BlsI	GCNGC	9 cut(s)	6, 76, 79, 82, 249, 727, 732, 1049, 1469
BmcAI	AGTACT	4 cut(s)	976, 1148, 1237, 1554
Bme1390I	CCNGG	6 cut(s)	91, 490, 1209, 1210, 1398, 1499
Bme18I	GGWCC	2 cut(s)	391, 654
BmeRI	GACNNNNNGTC	1 cut(s)	268
BmeT110I	CYCGRG	2 cut(s)	883, 1208
BmgT120I	GGNCC	4 cut(s)	63, 187, 391, 654
BmiI	GGNNCC	5 cut(s)	88, 442, 757, 1046, 1574
BmrFI	CCNGG	6 cut(s)	91, 490, 1209, 1210, 1398, 1499
BmrI	ACTGGG	1 cut(s)	761
BmsI	GCATC	1 cut(s)	1126
BmuI	ACTGGG	1 cut(s)	761
BpiI	GAAGAC	3 cut(s)	264, 348, 1399
BpmI	CTGGAG	1 cut(s)	161
Bpu10I	CCTNAGC	1 cut(s)	1536
Bpu1102I	GCTNAGC	1 cut(s)	1503
BpuEI	CTTGAG	2 cut(s)	602, 796
BpuMI	CCSGG	5 cut(s)	91, 490, 1209, 1210, 1499
BsaHI	GRCGYC	5 cut(s)	51, 87, 198, 1045, 1527
BsaI	GGTCTC	2 cut(s)	661, 1406
BsaJI	CCNNGG	9 cut(s)	8, 75, 394, 436, 759, 1129, 1208, 1485, 1576
BsaWI	WCCGGW	1 cut(s)	443
BsaXI	ACNNNNNCTCC	6 cut(s)	425, 455, 465, 495, 1243, 1273
Bsc4I	CCNNNNNNNGG	6 cut(s)	60, 90, 319, 523, 1285, 1419
Bse118I	RCCGGY	2 cut(s)	53, 83
Bse1I	ACTGG	3 cut(s)	756, 774, 988
Bse3DI	GCAATG	2 cut(s)	640, 1514
BseBI	CCWGG	1 cut(s)	1398
BseDI	CCNNGG	9 cut(s)	8, 75, 394, 436, 759, 1129, 1208, 1485, 1576
BseGI	GGATG	6 cut(s)	36, 937, 1141, 1243, 1371, 1446
BseLI	CCNNNNNNNGG	6 cut(s)	60, 90, 319, 523, 1285, 1419
BseMI	GCAATG	2 cut(s)	640, 1514
BseMII	CTCAG	8 cut(s)	332, 353, 542, 906, 1029, 1073, 1494, 1527
BseNI	ACTGG	3 cut(s)	756, 774, 988
BseX3I	CGGCCG	1 cut(s)	81
BseXI	GCAGC	3 cut(s)	234, 717, 1454
BseYI	CCCAGC	3 cut(s)	221, 1301, 1568
Bsh1236I	CGCG	1 cut(s)	77
Bsh1285I	CGRYCG	1 cut(s)	84
BshFI	GGCC	4 cut(s)	65, 83, 189, 1323
BshNI	GGYRCC	2 cut(s)	86, 1044
BsiEI	CGRYCG	1 cut(s)	84
BsiHKAI	GWGCWC	4 cut(s)	509, 542, 700, 996
BsiHKCI	CYCGRG	2 cut(s)	883, 1208
BsiSI	CCGG	8 cut(s)	54, 84, 90, 444, 489, 1051, 1209, 1498
BslFI	GGGAC	2 cut(s)	780, 821
BslI	CCNNNNNNNGG	6 cut(s)	60, 90, 319, 523, 1285, 1419
BsmAI	GTCTC	5 cut(s)	42, 198, 321, 661, 1406
BsmBI	CGTCTC	2 cut(s)	42, 321
BsmFI	GGGAC	2 cut(s)	780, 821
BsmI	GAATGC	2 cut(s)	180, 943
BsnI	GGCC	4 cut(s)	65, 83, 189, 1323
Bso31I	GGTCTC	2 cut(s)	661, 1406
BsoBI	CYCGRG	2 cut(s)	883, 1208
Bsp1286I	GDGCHC	4 cut(s)	509, 542, 700, 996
Bsp143I	GATC	5 cut(s)	755, 1066, 1085, 1101, 1170
Bsp1720I	GCTNAGC	1 cut(s)	1503
Bsp19I	CCATGG	3 cut(s)	394, 1485, 1576
BspACI	CCGC	8 cut(s)	72, 75, 77, 80, 725, 733, 1048, 1230
BspANI	GGCC	4 cut(s)	65, 83, 189, 1323
BspCNI	CTCAG	8 cut(s)	331, 352, 541, 907, 1030, 1074, 1495, 1528
BspFNI	CGCG	1 cut(s)	77
BspLI	GGNNCC	5 cut(s)	88, 442, 757, 1046, 1574
BspMAI	CTGCAG	1 cut(s)	1167
BspMI	ACCTGC	2 cut(s)	342, 1336
BspPI	GGATC	4 cut(s)	750, 763, 1080, 1178
BspQI	GCTCTTC	1 cut(s)	1284
BspT107I	GGYRCC	2 cut(s)	86, 1044
BspTNI	GGTCTC	2 cut(s)	661, 1406
BsrDI	GCAATG	2 cut(s)	640, 1514
BsrFI	RCCGGY	2 cut(s)	53, 83
BsrI	ACTGG	3 cut(s)	756, 774, 988
BssAI	RCCGGY	2 cut(s)	53, 83
BssECI	CCNNGG	9 cut(s)	8, 75, 394, 436, 759, 1129, 1208, 1485, 1576
BssMI	GATC	5 cut(s)	755, 1066, 1085, 1101, 1170
BssNI	GRCGYC	5 cut(s)	51, 87, 198, 1045, 1527
BssT1I	CCWWGG	5 cut(s)	394, 436, 1129, 1485, 1576
Bst2UI	CCWGG	1 cut(s)	1398
Bst4CI	ACNGT	1 cut(s)	979
Bst6I	CTCTTC	5 cut(s)	271, 797, 813, 827, 1284
BstACI	GRCGYC	5 cut(s)	51, 87, 198, 1045, 1527
BstC8I	GCNNGC	6 cut(s)	55, 85, 245, 525, 1020, 1455
BstDSI	CCRYGG	4 cut(s)	75, 394, 1485, 1576
BstF5I	GGATG	6 cut(s)	36, 937, 1141, 1243, 1371, 1446
BstFNI	CGCG	1 cut(s)	77
BstH2I	RGCGCY	3 cut(s)	90, 731, 1048
BstHHI	GCGC	3 cut(s)	89, 730, 1047
BstKTI	GATC	5 cut(s)	758, 1069, 1088, 1104, 1173
BstMAI	GTCTC	5 cut(s)	42, 198, 321, 661, 1406
BstMBI	GATC	5 cut(s)	755, 1066, 1085, 1101, 1170
BstMCI	CGRYCG	1 cut(s)	84
BstMWI	GCNNNNNNNGC	9 cut(s)	10, 71, 80, 86, 186, 577, 1078, 1311, 1320
BstNI	CCWGG	1 cut(s)	1398
BstNSI	RCATGY	2 cut(s)	523, 1381
BstSCI	CCNGG	6 cut(s)	89, 488, 1207, 1208, 1396, 1497
BstSFI	CTRYAG	2 cut(s)	1163, 1425
BstUI	CGCG	1 cut(s)	77
BstV1I	GCAGC	3 cut(s)	234, 717, 1454
BstV2I	GAAGAC	3 cut(s)	264, 348, 1399
BstX2I	RGATCY	2 cut(s)	755, 1085
BstYI	RGATCY	2 cut(s)	755, 1085
BstZI	CGGCCG	1 cut(s)	81
BsuRI	GGCC	4 cut(s)	65, 83, 189, 1323
BtgI	CCRYGG	4 cut(s)	75, 394, 1485, 1576
BtsCI	GGATG	6 cut(s)	36, 937, 1141, 1243, 1371, 1446
BveI	ACCTGC	2 cut(s)	342, 1336
Cac8I	GCNNGC	6 cut(s)	55, 85, 245, 525, 1020, 1455
CaiI	CAGNNNCTG	1 cut(s)	535
CfoI	GCGC	3 cut(s)	89, 730, 1047
Cfr10I	RCCGGY	2 cut(s)	53, 83
Cfr13I	GGNCC	4 cut(s)	63, 187, 391, 654
Cfr42I	CCGCGG	1 cut(s)	78
Cfr9I	CCCGGG	1 cut(s)	1208
CseI	GACGC	1 cut(s)	59
CsiI	ACCWGGT	1 cut(s)	1396
Csp6I	GTAC	5 cut(s)	163, 975, 1147, 1236, 1553
CspCI	CAANNNNNGTGG	2 cut(s)	931, 966
CviAII	CATG	9 cut(s)	136, 166, 395, 520, 811, 1378, 1486, 1577, 1582
CviQI	GTAC	5 cut(s)	163, 975, 1147, 1236, 1553
DinI	GGCGCC	2 cut(s)	88, 1046
DpnI	GATC	5 cut(s)	757, 1068, 1087, 1103, 1172
DpnII	GATC	5 cut(s)	755, 1066, 1085, 1101, 1170
DriI	GACNNNNNGTC	1 cut(s)	268
EaeI	YGGCCR	2 cut(s)	81, 1321
EagI	CGGCCG	1 cut(s)	81
Eam1104I	CTCTTC	5 cut(s)	271, 797, 813, 827, 1284
Eam1105I	GACNNNNNGTC	1 cut(s)	268
EarI	CTCTTC	5 cut(s)	271, 797, 813, 827, 1284
Ecl136II	GAGCTC	1 cut(s)	507
EclXI	CGGCCG	1 cut(s)	81
Eco130I	CCWWGG	5 cut(s)	394, 436, 1129, 1485, 1576
Eco24I	GRGCYC	1 cut(s)	509
Eco31I	GGTCTC	2 cut(s)	661, 1406
Eco47I	GGWCC	2 cut(s)	391, 654
Eco52I	CGGCCG	1 cut(s)	81
Eco53kI	GAGCTC	1 cut(s)	507
Eco57I	CTGAAG	2 cut(s)	612, 659
Eco88I	CYCGRG	2 cut(s)	883, 1208
EcoICRI	GAGCTC	1 cut(s)	507
EcoRII	CCWGG	1 cut(s)	1396
EcoT14I	CCWWGG	5 cut(s)	394, 436, 1129, 1485, 1576
EcoT38I	GRGCYC	1 cut(s)	509
EgeI	GGCGCC	2 cut(s)	88, 1046
EheI	GGCGCC	2 cut(s)	88, 1046
ErhI	CCWWGG	5 cut(s)	394, 436, 1129, 1485, 1576
Esp3I	CGTCTC	2 cut(s)	42, 321
FaeI	CATG	9 cut(s)	139, 169, 398, 523, 814, 1381, 1489, 1580, 1585
FaqI	GGGAC	2 cut(s)	780, 821
FatI	CATG	9 cut(s)	135, 165, 394, 519, 810, 1377, 1485, 1576, 1581
Fnu4HI	GCNGC	9 cut(s)	5, 75, 78, 81, 248, 726, 731, 1048, 1468
FokI	GGATG	6 cut(s)	43, 944, 1148, 1230, 1358, 1433
FriOI	GRGCYC	1 cut(s)	509
Fsp4HI	GCNGC	9 cut(s)	5, 75, 78, 81, 248, 726, 731, 1048, 1468
FspBI	CTAG	2 cut(s)	1275, 1311
GlaI	GCGC	3 cut(s)	88, 729, 1046
GluI	GCNGC	9 cut(s)	5, 75, 78, 81, 248, 726, 731, 1048, 1468
GsaI	CCCAGC	3 cut(s)	225, 1305, 1572
GsuI	CTGGAG	1 cut(s)	161
HaeII	RGCGCY	3 cut(s)	90, 731, 1048
HaeIII	GGCC	4 cut(s)	65, 83, 189, 1323
HapII	CCGG	8 cut(s)	54, 84, 90, 444, 489, 1051, 1209, 1498
HgaI	GACGC	1 cut(s)	59
HhaI	GCGC	3 cut(s)	89, 730, 1047
Hin1I	GRCGYC	5 cut(s)	51, 87, 198, 1045, 1527
Hin1II	CATG	9 cut(s)	139, 169, 398, 523, 814, 1381, 1489, 1580, 1585
Hin6I	GCGC	3 cut(s)	87, 728, 1045
HinP1I	GCGC	3 cut(s)	87, 728, 1045
HindIII	AAGCTT	1 cut(s)	241
HinfI	GANTC	7 cut(s)	263, 532, 706, 899, 1027, 1196, 1562
HpaII	CCGG	8 cut(s)	54, 84, 90, 444, 489, 1051, 1209, 1498
Hpy166II	GTNNAC	7 cut(s)	159, 262, 325, 749, 912, 1369, 1531
Hpy188I	TCNGA	8 cut(s)	196, 203, 342, 531, 717, 760, 904, 1032
Hpy188III	TCNNGA	4 cut(s)	389, 428, 775, 1523
Hpy8I	GTNNAC	7 cut(s)	159, 262, 325, 749, 912, 1369, 1531
HpyAV	CCTTC	4 cut(s)	683, 782, 1349, 1511
HpyCH4III	ACNGT	1 cut(s)	979
HpyCH4IV	ACGT	4 cut(s)	161, 198, 212, 1527
HpyCH4V	TGCA	7 cut(s)	523, 550, 1139, 1165, 1217, 1331, 1512
HpyF10VI	GCNNNNNNNGC	9 cut(s)	10, 71, 80, 86, 186, 577, 1078, 1311, 1320
HpySE526I	ACGT	4 cut(s)	161, 198, 212, 1527
Hsp92I	GRCGYC	5 cut(s)	51, 87, 198, 1045, 1527
Hsp92II	CATG	9 cut(s)	139, 169, 398, 523, 814, 1381, 1489, 1580, 1585
HspAI	GCGC	3 cut(s)	87, 728, 1045
KasI	GGCGCC	2 cut(s)	86, 1044
KroI	GCCGGC	2 cut(s)	53, 83
KroNI	GCCGGC	2 cut(s)	55, 85
KspI	CCGCGG	1 cut(s)	78
Kzo9I	GATC	5 cut(s)	755, 1066, 1085, 1101, 1170
LguI	GCTCTTC	1 cut(s)	1284
LmnI	GCTCC	7 cut(s)	446, 512, 545, 695, 965, 991, 1206
Lsp1109I	GCAGC	3 cut(s)	234, 717, 1454
LweI	GCATC	1 cut(s)	1126
MabI	ACCWGGT	1 cut(s)	1396
MaeI	CTAG	2 cut(s)	1275, 1311
MaeII	ACGT	4 cut(s)	161, 198, 212, 1527
MaeIII	GTNAC	2 cut(s)	779, 979
MalI	GATC	5 cut(s)	757, 1068, 1087, 1103, 1172
MboI	GATC	5 cut(s)	755, 1066, 1085, 1101, 1170
MfeI	CAATTG	1 cut(s)	1140
MflI	RGATCY	2 cut(s)	755, 1085
MhlI	GDGCHC	4 cut(s)	509, 542, 700, 996
MlsI	TGGCCA	1 cut(s)	1323
MluCI	AATT	8 cut(s)	124, 417, 544, 551, 595, 739, 1140, 1190
MluNI	TGGCCA	1 cut(s)	1323
Mly113I	GGCGCC	2 cut(s)	87, 1045
MlyI	GAGTC	3 cut(s)	257, 700, 1205
MmeI	TCCRAC	1 cut(s)	534
Mox20I	TGGCCA	1 cut(s)	1323
MreI	CGCCGGCG	1 cut(s)	53
MroNI	GCCGGC	2 cut(s)	53, 83
MscI	TGGCCA	1 cut(s)	1323
MseI	TTAA	2 cut(s)	485, 1284
MslI	CAYNNNNRTG	2 cut(s)	518, 1376
Msp20I	TGGCCA	1 cut(s)	1323
MspA1I	CMGCKG	2 cut(s)	77, 1568
MspI	CCGG	8 cut(s)	54, 84, 90, 444, 489, 1051, 1209, 1498
MspR9I	CCNGG	6 cut(s)	91, 490, 1209, 1210, 1398, 1499
MunI	CAATTG	1 cut(s)	1140
Mva1269I	GAATGC	2 cut(s)	180, 943
MvaI	CCWGG	1 cut(s)	1398
MvnI	CGCG	1 cut(s)	77
MwoI	GCNNNNNNNGC	9 cut(s)	10, 71, 80, 86, 186, 577, 1078, 1311, 1320
NaeI	GCCGGC	2 cut(s)	55, 85
NarI	GGCGCC	2 cut(s)	87, 1045
NciI	CCSGG	5 cut(s)	91, 490, 1209, 1210, 1499
NcoI	CCATGG	3 cut(s)	394, 1485, 1576
NdeII	GATC	5 cut(s)	755, 1066, 1085, 1101, 1170
NgoMIV	GCCGGC	2 cut(s)	53, 83
NlaIII	CATG	9 cut(s)	139, 169, 398, 523, 814, 1381, 1489, 1580, 1585
NlaIV	GGNNCC	5 cut(s)	88, 442, 757, 1046, 1574
NmeAIII	GCCGAG	1 cut(s)	33
NspI	RCATGY	2 cut(s)	523, 1381
PciI	ACATGT	1 cut(s)	1377
PciSI	GCTCTTC	1 cut(s)	1284
PctI	GAATGC	2 cut(s)	180, 943
PdiI	GCCGGC	2 cut(s)	55, 85
PfeI	GAWTC	4 cut(s)	532, 899, 1027, 1562
PflFI	GACNNNGTC	1 cut(s)	1398
PkrI	GCNGC	9 cut(s)	6, 76, 79, 82, 249, 727, 732, 1049, 1469
PleI	GAGTC	3 cut(s)	257, 700, 1204
PluTI	GGCGCC	2 cut(s)	90, 1048
PpsI	GAGTC	3 cut(s)	257, 700, 1204
PscI	ACATGT	1 cut(s)	1377
Psp124BI	GAGCTC	1 cut(s)	509
Psp6I	CCWGG	1 cut(s)	1396
PspFI	CCCAGC	3 cut(s)	221, 1301, 1568
PspGI	CCWGG	1 cut(s)	1396
PspN4I	GGNNCC	5 cut(s)	88, 442, 757, 1046, 1574
PspPI	GGNCC	4 cut(s)	63, 187, 391, 654
PstI	CTGCAG	1 cut(s)	1167
PstNI	CAGNNNCTG	1 cut(s)	535
PsuI	RGATCY	2 cut(s)	755, 1085
PsyI	GACNNNGTC	1 cut(s)	1398
PvuII	CAGCTG	1 cut(s)	1568
RsaI	GTAC	5 cut(s)	164, 976, 1148, 1237, 1554
RsaNI	GTAC	5 cut(s)	163, 975, 1147, 1236, 1553
RseI	CAYNNNNRTG	2 cut(s)	518, 1376
SacI	GAGCTC	1 cut(s)	509
SacII	CCGCGG	1 cut(s)	78
SapI	GCTCTTC	1 cut(s)	1284
SaqAI	TTAA	2 cut(s)	485, 1284
SatI	GCNGC	9 cut(s)	5, 75, 78, 81, 248, 726, 731, 1048, 1468
Sau3AI	GATC	5 cut(s)	755, 1066, 1085, 1101, 1170
Sau96I	GGNCC	4 cut(s)	63, 187, 391, 654
ScaI	AGTACT	4 cut(s)	976, 1148, 1237, 1554
SchI	GAGTC	3 cut(s)	257, 700, 1205
ScrFI	CCNGG	6 cut(s)	91, 490, 1209, 1210, 1398, 1499
SduI	GDGCHC	4 cut(s)	509, 542, 700, 996
SexAI	ACCWGGT	1 cut(s)	1396
SfaNI	GCATC	1 cut(s)	1126
SfcI	CTRYAG	2 cut(s)	1163, 1425
SfoI	GGCGCC	2 cut(s)	88, 1046
Sfr303I	CCGCGG	1 cut(s)	78
SgrAI	CRCCGGYG	1 cut(s)	53
SgrBI	CCGCGG	1 cut(s)	78
SinI	GGWCC	2 cut(s)	391, 654
SmaI	CCCGGG	1 cut(s)	1210
SmiMI	CAYNNNNRTG	2 cut(s)	518, 1376
SmlI	CTYRAG	2 cut(s)	581, 775
SmoI	CTYRAG	2 cut(s)	581, 775
Sse9I	AATT	8 cut(s)	124, 417, 544, 551, 595, 739, 1140, 1190
SsiI	CCGC	8 cut(s)	72, 75, 77, 80, 725, 733, 1048, 1230
SspDI	GGCGCC	2 cut(s)	86, 1044
SspMI	CTAG	2 cut(s)	1275, 1311
SstI	GAGCTC	1 cut(s)	509
StyD4I	CCNGG	6 cut(s)	89, 488, 1207, 1208, 1396, 1497
StyI	CCWWGG	5 cut(s)	394, 436, 1129, 1485, 1576
TaaI	ACNGT	1 cut(s)	979
TaiI	ACGT	4 cut(s)	164, 201, 215, 1530
TaqI	TCGA	4 cut(s)	122, 309, 455, 876
TasI	AATT	8 cut(s)	124, 417, 544, 551, 595, 739, 1140, 1190
TatI	WGTACW	4 cut(s)	974, 1146, 1235, 1552
TauI	GCSGC	5 cut(s)	77, 80, 83, 728, 1050
TfiI	GAWTC	4 cut(s)	532, 899, 1027, 1562
Tru1I	TTAA	2 cut(s)	485, 1284
Tru9I	TTAA	2 cut(s)	485, 1284
TseI	GCWGC	4 cut(s)	4, 247, 730, 1467
TspDTI	ATGAA	4 cut(s)	182, 479, 801, 1232
TspGWI	ACGGA	1 cut(s)	1078
TspMI	CCCGGG	1 cut(s)	1208
Tth111I	GACNNNGTC	1 cut(s)	1398
VpaK11BI	GGWCC	2 cut(s)	391, 654
XapI	RAATTY	2 cut(s)	124, 739
XceI	RCATGY	2 cut(s)	523, 1381
XcmI	CCANNNNNNNNNTGG	2 cut(s)	443, 1382
XmaI	CCCGGG	1 cut(s)	1208
XspI	CTAG	2 cut(s)	1275, 1311
ZraI	GACGTC	2 cut(s)	199, 1528
ZrmI	AGTACT	4 cut(s)	976, 1148, 1237, 1554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.