Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0001985

Physical Location & Seq

Genomic Coordinates Reverse (-)

17509220 .. 17511553

Gene Structure 2334 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g12380.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGCTGCCGAGGCTGAACGGTGGTGTTTGGATGGACGACAGGGAGGACAGAGAGACTGTTTCCTGGACTAGAACCTCCGCCGCTGCCATTGCCGGCACCACCGAGAACAAAGACGAGATGGGTTCTCTTTCCACCTTCAAATCTATGCTGGAGGCTGAAGACGACTGGTACATGGCGACGAATAACAGCATCCACGGTCATTCGGATGTCAGAGACATCAGCTTCTCGCCGAGCTTTGCCGACCCAGAAAGCTTGCTGCTCAACCCGGTGGACTCTTCCTCCTCCTGCTCGCCGTCGTCGTCGGTTTTCAACAATCTCGACCCGAATCAGGTTCATTACTACATGCCTCAAAATCCCAACTTGTCTTCGCTGCTTAATGTTGTTCCTAACAACCCGTCATCGGCACTGATCGATCACGGCTTCGATTTGGGCTGTGACATTGGGTTTCTTGACACTCAAGCTTCGACTGGTGGTTCGAGTTTGATGAACCGGGGAGGTGGAGTTTTAACTGGGTTCAATGATTTGAGCTCGAATAGCCAGATGAATGCTCAGAATTTGGGTTCTAATTTACAGTTTTCGACTACCCGTATGCCTCAATTGCTCGAAAACAGTTCAAATTTTGCGGGTTTTCGAGGTTTGGACGATGGTTTAGCCAATGCTTTGTTTCCTAATAGGCCTAAGTTACTGAGACCCCTTGAGTCCTTCCCTTCTGTGGGAGCACAGCCAACTCTTTTCCAGAAAAGAGCGGCGCTTCGGAAAAACTTAGCCGATGGTGGAGGGAATTTGGGTGTTTTGGGCTCACAAGGGGGCCTGGTTTTGAATGAAGGCAATGAGAGGAAGAGGGAGATGGGTGTAGAGAATGAGAAGAAGAGGAAAATGAGAGGGGGAGATGATGTTGATGATCTGAGTTTTGATGGTTCGGGTTTGAACTATGATTCGGATGAGTTTACTGAGAACACTAAGGTGGATGACGGTGCCAAGAATGGTGGGAATAGCTCGAATGCGAATAGTACTGTTACCGCTGCTGGAGGTGGAGGAGGAGGAGGGGGTCATAAGGGGAAGAAGAAAGGGTTGCCTGCTAAGAATCTGATGGCTGAGAGGCGCCGCCGGCAGAAGCTCAATGATAGGCTATACATGCTGAGATCCGTTGTTCCGAAAATCAGCAAAATGGACAGGGCCTCAATCCTTGGGGATGCAATTGAGTACTTGAAGGAACTTCTGCAGAGGATCAACAACCTCCATAATGAATTGGAGTCCATCCCTTCCGGGTCTGCATTGACACCTACCGGAAATACTTTCCACCCTTTGACACCCACTCCGGCTACTCTGCCAAATCGTATCAAGGAAGAACTTTGCCCCAGCTCATTACCTAGCCCAAATGGCCAACCTGCAAGGGTTGAAGTTAGGCAGCGAGAAGGACGAGCAGTGAATATCCACATGTTTTGCGGCCGAAGGCCAGGTCTGTTACTCTCGACCATGAGAACTTTGGATAACCTTGGGTTGGACATCCAGCAAGCTGTCATCAGCTGTTTCAATGGTTTTGCTATGGATGTCTTCCGTGCCGAGCAATGCAAGGAAGGCCAGGACGTCCACCCGGATCAGATAAAGGCAGTACTTCTCGATTTGATCGGGTTCCATGGCATGGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

550

Amino Acids

59.36

Weight (kDa)

5.78

Isoelectric Point (pI)

48.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12860 AT1G12860 AT1G12860 AT3G26744 AT3G26744 AT3G26744 AT3G26744 AT3G26744
fragaria_vesca	FvH4_5g09300 FvH4_5g09300
malus_domestica	MD06G1132200.v1.1 MD09G1003800.v1.1 MD14G1148600.v1.1 MD17G1007400.v1.1
prunus_persica	Prupe.3G312800_v2.0.a1 Prupe.3G312800_v2.0.a1 Prupe.5G143200_v2.0.a1
pyrus_communis	pycom06g12380 pycom111g00280 pycom14g12340 pycom17g00300
rosa_chinensis	RchiOBHm_Chr2g0176421 RchiOBHm_Chr7g0188921
rosa_laevigata	RLG00000004651 RLG00000022412
rosa_multiflora	Rmu_co8326225.1_g000001 Rmu_co8487291.1_g000001 Rmu_sc0009140.1_g000010 Rmu_sc0011904.1_g000015 Rmu_ssc0000113.1_g000008
rosa_roxburghii	Rroxscaffold_2G00076450 Rroxscaffold_3G00265940
rosa_rugosa	Rorug02G0594200 Rorug02G0594200 Rorug06G0494600
rosa_samantha	Rh2AG672700 Rh2BG684200 Rh2CG647000 Rh2DG697800 Rh7AG099500 Rh7BG101600 Rh7CG102900 Rh7DG101300
rosa_wichuraiana	Rw2G055180 Rw7G008570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1590
Acc36I	ACCTGC	1 cut(s)	1396
AccB1I	GGYRCC	3 cut(s)	95, 974, 1101
AccB7I	CCANNNNNTGG	1 cut(s)	1642
AccBSI	CCGCTC	1 cut(s)	746
AciI	CCGC	7 cut(s)	78, 81, 623, 746, 1020, 1105, 1446
AclWI	GGATC	3 cut(s)	1137, 1235, 1605
AcoI	YGGCCR	2 cut(s)	1381, 1447
AcsI	RAATTY	3 cut(s)	553, 616, 781
AcuI	CTGAAG	1 cut(s)	177
AcyI	GRCGYC	2 cut(s)	1102, 1587
AfaI	GTAC	4 cut(s)	170, 1012, 1205, 1614
AfiI	CCNNNNNNNGG	6 cut(s)	328, 400, 712, 713, 1501, 1642
AflIII	ACRYGT	1 cut(s)	1437
AgsI	TTSAA	9 cut(s)	139, 310, 517, 615, 820, 928, 1210, 1400, 1534
AjnI	CCWGG	4 cut(s)	62, 810, 1456, 1581
AleI	CACNNNNGTG	1 cut(s)	962
Alw21I	GWGCWC	2 cut(s)	530, 721
Alw26I	GTCTC	3 cut(s)	47, 207, 682
AlwI	GGATC	3 cut(s)	1137, 1235, 1605
AoxI	GGCC	7 cut(s)	674, 808, 1176, 1381, 1447, 1454, 1579
ApeKI	GCWGC	6 cut(s)	4, 83, 256, 370, 1022, 1408
ApoI	RAATTY	3 cut(s)	553, 616, 781
ArsI	GACNNNNNNTTYG	4 cut(s)	457, 489, 1444, 1476
AspLEI	GCGC	2 cut(s)	751, 1104
AspS9I	GGNCC	2 cut(s)	808, 1176
AsuC2I	CCSGG	4 cut(s)	266, 491, 1267, 1595
BalI	TGGCCA	1 cut(s)	1383
BanI	GGYRCC	3 cut(s)	95, 974, 1101
BanII	GRGCYC	2 cut(s)	530, 800
BbsI	GAAGAC	3 cut(s)	165, 357, 1546
Bbv12I	GWGCWC	2 cut(s)	530, 721
BbvI	GCAGC	5 cut(s)	70, 243, 357, 1009, 1420
BccI	CCATC	8 cut(s)	25, 112, 638, 764, 841, 908, 1084, 1265
BceAI	ACGGC	2 cut(s)	277, 433
BciT130I	CCWGG	4 cut(s)	64, 812, 1458, 1583
BcnI	CCSGG	4 cut(s)	266, 491, 1267, 1595
BcoDI	GTCTC	3 cut(s)	47, 207, 682
BfaI	CTAG	2 cut(s)	69, 1371
BfmI	CTRYAG	1 cut(s)	1220
BfoI	RGCGCY	2 cut(s)	752, 1105
BfuAI	ACCTGC	1 cut(s)	1396
BglI	GCCNNNNNGGC	1 cut(s)	1380
BmcAI	AGTACT	3 cut(s)	1012, 1205, 1614
Bme1390I	CCNGG	8 cut(s)	64, 266, 491, 812, 1267, 1458, 1583, 1595
BmgT120I	GGNCC	2 cut(s)	808, 1176
BmiI	GGNNCC	5 cut(s)	97, 809, 976, 1103, 1634
BmrFI	CCNGG	8 cut(s)	64, 266, 491, 812, 1267, 1458, 1583, 1595
BmrI	ACTGGG	1 cut(s)	519
BmsI	GCATC	2 cut(s)	198, 1183
BmuI	ACTGGG	1 cut(s)	519
BpiI	GAAGAC	3 cut(s)	165, 357, 1546
BpmI	CTGGAG	2 cut(s)	170, 1047
BpuEI	CTTGAG	2 cut(s)	441, 716
BpuMI	CCSGG	4 cut(s)	266, 491, 1267, 1595
Bsa29I	ATCGAT	1 cut(s)	411
BsaHI	GRCGYC	2 cut(s)	1102, 1587
BsaI	GGTCTC	1 cut(s)	682
BsaJI	CCNNGG	6 cut(s)	8, 193, 490, 1186, 1495, 1636
BsaWI	WCCGGW	1 cut(s)	1286
BsaXI	ACNNNNNCTCC	8 cut(s)	263, 293, 486, 516, 879, 909, 1300, 1330
Bsc4I	CCNNNNNNNGG	6 cut(s)	328, 400, 712, 713, 1501, 1642
Bse118I	RCCGGY	2 cut(s)	92, 1107
Bse1I	ACTGG	3 cut(s)	170, 472, 514
Bse3DI	GCAATG	3 cut(s)	87, 835, 1574
BseBI	CCWGG	4 cut(s)	64, 812, 1458, 1583
BseCI	ATCGAT	1 cut(s)	411
BseDI	CCNNGG	6 cut(s)	8, 193, 490, 1186, 1495, 1636
BseGI	GGATG	9 cut(s)	36, 189, 211, 946, 973, 1198, 1257, 1506, 1555
BseLI	CCNNNNNNNGG	6 cut(s)	328, 400, 712, 713, 1501, 1642
BseMI	GCAATG	3 cut(s)	87, 835, 1574
BseMII	CTCAG	6 cut(s)	563, 677, 896, 942, 1086, 1130
BseNI	ACTGG	3 cut(s)	170, 472, 514
BseRI	GAGGAG	4 cut(s)	271, 1050, 1053, 1056
BseX3I	CGGCCG	1 cut(s)	1447
BseXI	GCAGC	5 cut(s)	70, 243, 357, 1009, 1420
BseYI	CCCAGC	1 cut(s)	1358
Bsh1285I	CGRYCG	1 cut(s)	1450
BshFI	GGCC	7 cut(s)	676, 810, 1178, 1383, 1449, 1456, 1581
BshNI	GGYRCC	3 cut(s)	95, 974, 1101
BshVI	ATCGAT	1 cut(s)	411
BsiEI	CGRYCG	1 cut(s)	1450
BsiHKAI	GWGCWC	2 cut(s)	530, 721
BsiSI	CCGG	8 cut(s)	93, 266, 490, 1108, 1266, 1287, 1319, 1595
BslI	CCNNNNNNNGG	6 cut(s)	328, 400, 712, 713, 1501, 1642
BsmAI	GTCTC	3 cut(s)	47, 207, 682
BsmI	GAATGC	2 cut(s)	550, 1006
BsnI	GGCC	7 cut(s)	676, 810, 1178, 1383, 1449, 1456, 1581
Bso31I	GGTCTC	1 cut(s)	682
Bsp1286I	GDGCHC	3 cut(s)	530, 721, 800
Bsp143I	GATC	7 cut(s)	408, 412, 901, 1142, 1227, 1597, 1626
Bsp19I	CCATGG	1 cut(s)	1636
BspACI	CCGC	7 cut(s)	78, 81, 623, 746, 1020, 1105, 1446
BspANI	GGCC	7 cut(s)	676, 810, 1178, 1383, 1449, 1456, 1581
BspCNI	CTCAG	6 cut(s)	562, 678, 897, 943, 1087, 1131
BspDI	ATCGAT	1 cut(s)	411
BspLI	GGNNCC	5 cut(s)	97, 809, 976, 1103, 1634
BspMAI	CTGCAG	1 cut(s)	1224
BspMI	ACCTGC	1 cut(s)	1396
BspPI	GGATC	3 cut(s)	1137, 1235, 1605
BspT107I	GGYRCC	3 cut(s)	95, 974, 1101
BspTNI	GGTCTC	1 cut(s)	682
BsrBI	CCGCTC	1 cut(s)	746
BsrDI	GCAATG	3 cut(s)	87, 835, 1574
BsrFI	RCCGGY	2 cut(s)	92, 1107
BsrI	ACTGG	3 cut(s)	170, 472, 514
BssAI	RCCGGY	2 cut(s)	92, 1107
BssECI	CCNNGG	6 cut(s)	8, 193, 490, 1186, 1495, 1636
BssMI	GATC	7 cut(s)	408, 412, 901, 1142, 1227, 1597, 1626
BssNI	GRCGYC	2 cut(s)	1102, 1587
BssT1I	CCWWGG	3 cut(s)	1186, 1495, 1636
Bst2UI	CCWGG	4 cut(s)	64, 812, 1458, 1583
Bst4CI	ACNGT	7 cut(s)	20, 58, 197, 573, 611, 974, 1015
Bst6I	CTCTTC	3 cut(s)	280, 833, 863
BstACI	GRCGYC	2 cut(s)	1102, 1587
BstC8I	GCNNGC	6 cut(s)	94, 254, 290, 1077, 1109, 1515
BstDSI	CCRYGG	2 cut(s)	193, 1636
BstF5I	GGATG	9 cut(s)	36, 189, 211, 946, 973, 1198, 1257, 1506, 1555
BstH2I	RGCGCY	2 cut(s)	752, 1105
BstHHI	GCGC	2 cut(s)	751, 1104
BstKTI	GATC	7 cut(s)	411, 415, 904, 1145, 1230, 1600, 1629
BstMAI	GTCTC	3 cut(s)	47, 207, 682
BstMBI	GATC	7 cut(s)	408, 412, 901, 1142, 1227, 1597, 1626
BstMCI	CGRYCG	1 cut(s)	1450
BstMWI	GCNNNNNNNGC	8 cut(s)	10, 89, 534, 598, 1108, 1135, 1380, 1578
BstNI	CCWGG	4 cut(s)	64, 812, 1458, 1583
BstNSI	RCATGY	3 cut(s)	346, 1138, 1441
BstSCI	CCNGG	8 cut(s)	62, 264, 489, 810, 1265, 1456, 1581, 1593
BstSFI	CTRYAG	1 cut(s)	1220
BstV1I	GCAGC	5 cut(s)	70, 243, 357, 1009, 1420
BstV2I	GAAGAC	3 cut(s)	165, 357, 1546
BstX2I	RGATCY	1 cut(s)	1142
BstYI	RGATCY	1 cut(s)	1142
BstZI	CGGCCG	1 cut(s)	1447
Bsu15I	ATCGAT	1 cut(s)	411
BsuRI	GGCC	7 cut(s)	676, 810, 1178, 1383, 1449, 1456, 1581
BsuTUI	ATCGAT	1 cut(s)	411
BtgI	CCRYGG	2 cut(s)	193, 1636
BtsCI	GGATG	9 cut(s)	36, 189, 211, 946, 973, 1198, 1257, 1506, 1555
BtsI	GCAGTG	1 cut(s)	1431
BtsIMutI	CAGTG	2 cut(s)	404, 1431
BveI	ACCTGC	1 cut(s)	1396
Cac8I	GCNNGC	6 cut(s)	94, 254, 290, 1077, 1109, 1515
CfoI	GCGC	2 cut(s)	751, 1104
Cfr10I	RCCGGY	2 cut(s)	92, 1107
Cfr13I	GGNCC	2 cut(s)	808, 1176
ClaI	ATCGAT	1 cut(s)	411
Csp6I	GTAC	4 cut(s)	169, 1011, 1204, 1613
CspCI	CAANNNNNGTGG	4 cut(s)	967, 1002, 1424, 1459
CviAII	CATG	7 cut(s)	172, 343, 1135, 1438, 1477, 1637, 1642
CviQI	GTAC	4 cut(s)	169, 1011, 1204, 1613
DinI	GGCGCC	1 cut(s)	1103
DpnI	GATC	7 cut(s)	410, 414, 903, 1144, 1229, 1599, 1628
DpnII	GATC	7 cut(s)	408, 412, 901, 1142, 1227, 1597, 1626
EaeI	YGGCCR	2 cut(s)	1381, 1447
EagI	CGGCCG	1 cut(s)	1447
Eam1104I	CTCTTC	3 cut(s)	280, 833, 863
EarI	CTCTTC	3 cut(s)	280, 833, 863
EciI	GGCGGA	1 cut(s)	67
Ecl136II	GAGCTC	1 cut(s)	528
EclXI	CGGCCG	1 cut(s)	1447
Eco130I	CCWWGG	3 cut(s)	1186, 1495, 1636
Eco147I	AGGCCT	1 cut(s)	676
Eco24I	GRGCYC	2 cut(s)	530, 800
Eco31I	GGTCTC	1 cut(s)	682
Eco52I	CGGCCG	1 cut(s)	1447
Eco53kI	GAGCTC	1 cut(s)	528
Eco57I	CTGAAG	1 cut(s)	177
EcoICRI	GAGCTC	1 cut(s)	528
EcoO109I	RGGNCCY	2 cut(s)	808, 1176
EcoRII	CCWGG	4 cut(s)	62, 810, 1456, 1581
EcoT14I	CCWWGG	3 cut(s)	1186, 1495, 1636
EcoT38I	GRGCYC	2 cut(s)	530, 800
EgeI	GGCGCC	1 cut(s)	1103
EheI	GGCGCC	1 cut(s)	1103
ErhI	CCWWGG	3 cut(s)	1186, 1495, 1636
FaeI	CATG	7 cut(s)	175, 346, 1138, 1441, 1480, 1640, 1645
FatI	CATG	7 cut(s)	171, 342, 1134, 1437, 1476, 1636, 1641
FauI	CCCGC	1 cut(s)	616
FokI	GGATG	9 cut(s)	43, 176, 218, 953, 980, 1205, 1244, 1493, 1562
FriOI	GRGCYC	2 cut(s)	530, 800
FspBI	CTAG	2 cut(s)	69, 1371
GlaI	GCGC	2 cut(s)	750, 1103
GsaI	CCCAGC	1 cut(s)	1362
GsuI	CTGGAG	2 cut(s)	170, 1047
HaeII	RGCGCY	2 cut(s)	752, 1105
HaeIII	GGCC	7 cut(s)	676, 810, 1178, 1383, 1449, 1456, 1581
HapII	CCGG	8 cut(s)	93, 266, 490, 1108, 1266, 1287, 1319, 1595
HhaI	GCGC	2 cut(s)	751, 1104
Hin1I	GRCGYC	2 cut(s)	1102, 1587
Hin1II	CATG	7 cut(s)	175, 346, 1138, 1441, 1480, 1640, 1645
Hin6I	GCGC	2 cut(s)	749, 1102
HinP1I	GCGC	2 cut(s)	749, 1102
HindIII	AAGCTT	2 cut(s)	250, 459
HinfI	GANTC	6 cut(s)	272, 325, 698, 935, 1084, 1253
HpaII	CCGG	8 cut(s)	93, 266, 490, 1108, 1266, 1287, 1319, 1595
Hpy166II	GTNNAC	3 cut(s)	271, 948, 1591
Hpy188I	TCNGA	9 cut(s)	205, 212, 552, 756, 906, 940, 1089, 1155, 1602
Hpy188III	TCNNGA	5 cut(s)	317, 449, 736, 1471, 1619
Hpy8I	GTNNAC	3 cut(s)	271, 948, 1591
Hpy99I	CGWCG	4 cut(s)	181, 298, 301, 304
HpyAV	CCTTC	9 cut(s)	145, 712, 717, 818, 1204, 1272, 1409, 1446, 1571
HpyCH4III	ACNGT	7 cut(s)	20, 58, 197, 573, 611, 974, 1015
HpyCH4IV	ACGT	1 cut(s)	1587
HpyCH4V	TGCA	5 cut(s)	1196, 1222, 1274, 1391, 1572
HpyF10VI	GCNNNNNNNGC	8 cut(s)	10, 89, 534, 598, 1108, 1135, 1380, 1578
HpySE526I	ACGT	1 cut(s)	1587
Hsp92I	GRCGYC	2 cut(s)	1102, 1587
Hsp92II	CATG	7 cut(s)	175, 346, 1138, 1441, 1480, 1640, 1645
HspAI	GCGC	2 cut(s)	749, 1102
KasI	GGCGCC	1 cut(s)	1101
KroI	GCCGGC	2 cut(s)	92, 1107
KroNI	GCCGGC	2 cut(s)	94, 1109
Kzo9I	GATC	7 cut(s)	408, 412, 901, 1142, 1227, 1597, 1626
LmnI	GCTCC	1 cut(s)	716
Lsp1109I	GCAGC	5 cut(s)	70, 243, 357, 1009, 1420
LweI	GCATC	2 cut(s)	198, 1183
MaeI	CTAG	2 cut(s)	69, 1371
MaeII	ACGT	1 cut(s)	1587
MaeIII	GTNAC	4 cut(s)	434, 681, 1015, 1464
MalI	GATC	7 cut(s)	410, 414, 903, 1144, 1229, 1599, 1628
MbiI	CCGCTC	1 cut(s)	746
MboI	GATC	7 cut(s)	408, 412, 901, 1142, 1227, 1597, 1626
MfeI	CAATTG	2 cut(s)	596, 1197
MflI	RGATCY	1 cut(s)	1142
MhlI	GDGCHC	3 cut(s)	530, 721, 800
MlsI	TGGCCA	1 cut(s)	1383
MluCI	AATT	7 cut(s)	553, 565, 596, 616, 781, 1197, 1247
MluNI	TGGCCA	1 cut(s)	1383
Mly113I	GGCGCC	1 cut(s)	1102
MlyI	GAGTC	3 cut(s)	266, 707, 1262
MmeI	TCCRAC	1 cut(s)	1482
Mox20I	TGGCCA	1 cut(s)	1383
MroNI	GCCGGC	2 cut(s)	92, 1107
MscI	TGGCCA	1 cut(s)	1383
MseI	TTAA	2 cut(s)	375, 506
MslI	CAYNNNNRTG	2 cut(s)	204, 962
Msp20I	TGGCCA	1 cut(s)	1383
MspA1I	CMGCKG	3 cut(s)	83, 1022, 1527
MspI	CCGG	8 cut(s)	93, 266, 490, 1108, 1266, 1287, 1319, 1595
MspR9I	CCNGG	8 cut(s)	64, 266, 491, 812, 1267, 1458, 1583, 1595
MunI	CAATTG	2 cut(s)	596, 1197
Mva1269I	GAATGC	2 cut(s)	550, 1006
MvaI	CCWGG	4 cut(s)	64, 812, 1458, 1583
MwoI	GCNNNNNNNGC	8 cut(s)	10, 89, 534, 598, 1108, 1135, 1380, 1578
NaeI	GCCGGC	2 cut(s)	94, 1109
NarI	GGCGCC	1 cut(s)	1102
NciI	CCSGG	4 cut(s)	266, 491, 1267, 1595
NcoI	CCATGG	1 cut(s)	1636
NdeII	GATC	7 cut(s)	408, 412, 901, 1142, 1227, 1597, 1626
NgoMIV	GCCGGC	2 cut(s)	92, 1107
NlaIII	CATG	7 cut(s)	175, 346, 1138, 1441, 1480, 1640, 1645
NlaIV	GGNNCC	5 cut(s)	97, 809, 976, 1103, 1634
NmeAIII	GCCGAG	3 cut(s)	33, 255, 1588
NmuCI	GTSAC	1 cut(s)	434
NspI	RCATGY	3 cut(s)	346, 1138, 1441
OliI	CACNNNNGTG	1 cut(s)	962
PceI	AGGCCT	1 cut(s)	676
PciI	ACATGT	1 cut(s)	1437
PcsI	WCGNNNNNNNCGW	1 cut(s)	296
PctI	GAATGC	2 cut(s)	550, 1006
PdiI	GCCGGC	2 cut(s)	94, 1109
PfeI	GAWTC	3 cut(s)	325, 935, 1084
PflMI	CCANNNNNTGG	1 cut(s)	1642
PfoI	TCCNGGA	1 cut(s)	62
PleI	GAGTC	3 cut(s)	266, 706, 1261
PluTI	GGCGCC	1 cut(s)	1105
PpsI	GAGTC	3 cut(s)	266, 706, 1261
PscI	ACATGT	1 cut(s)	1437
Psp124BI	GAGCTC	1 cut(s)	530
Psp6I	CCWGG	4 cut(s)	62, 810, 1456, 1581
PspFI	CCCAGC	1 cut(s)	1358
PspGI	CCWGG	4 cut(s)	62, 810, 1456, 1581
PspN4I	GGNNCC	5 cut(s)	97, 809, 976, 1103, 1634
PspPI	GGNCC	2 cut(s)	808, 1176
PstI	CTGCAG	1 cut(s)	1224
PsuI	RGATCY	1 cut(s)	1142
PvuII	CAGCTG	1 cut(s)	1527
RsaI	GTAC	4 cut(s)	170, 1012, 1205, 1614
RsaNI	GTAC	4 cut(s)	169, 1011, 1204, 1613
RseI	CAYNNNNRTG	2 cut(s)	204, 962
SacI	GAGCTC	1 cut(s)	530
SaqAI	TTAA	2 cut(s)	375, 506
Sau3AI	GATC	7 cut(s)	408, 412, 901, 1142, 1227, 1597, 1626
Sau96I	GGNCC	2 cut(s)	808, 1176
ScaI	AGTACT	3 cut(s)	1012, 1205, 1614
SchI	GAGTC	3 cut(s)	266, 707, 1262
ScrFI	CCNGG	8 cut(s)	64, 266, 491, 812, 1267, 1458, 1583, 1595
SduI	GDGCHC	3 cut(s)	530, 721, 800
SfaNI	GCATC	2 cut(s)	198, 1183
SfcI	CTRYAG	1 cut(s)	1220
SfoI	GGCGCC	1 cut(s)	1103
SmiMI	CAYNNNNRTG	2 cut(s)	204, 962
SmlI	CTYRAG	2 cut(s)	456, 695
SmoI	CTYRAG	2 cut(s)	456, 695
Sse9I	AATT	7 cut(s)	553, 565, 596, 616, 781, 1197, 1247
SseBI	AGGCCT	1 cut(s)	676
SsiI	CCGC	7 cut(s)	78, 81, 623, 746, 1020, 1105, 1446
SspDI	GGCGCC	1 cut(s)	1101
SspMI	CTAG	2 cut(s)	69, 1371
SstI	GAGCTC	1 cut(s)	530
StuI	AGGCCT	1 cut(s)	676
StyD4I	CCNGG	8 cut(s)	62, 264, 489, 810, 1265, 1456, 1581, 1593
StyI	CCWWGG	3 cut(s)	1186, 1495, 1636
TaaI	ACNGT	7 cut(s)	20, 58, 197, 573, 611, 974, 1015
TaiI	ACGT	1 cut(s)	1590
TasI	AATT	7 cut(s)	553, 565, 596, 616, 781, 1197, 1247
TatI	WGTACW	3 cut(s)	1010, 1203, 1612
TauI	GCSGC	4 cut(s)	83, 749, 1107, 1449
TfiI	GAWTC	3 cut(s)	325, 935, 1084
Tru1I	TTAA	2 cut(s)	375, 506
Tru9I	TTAA	2 cut(s)	375, 506
TscAI	CASTG	2 cut(s)	411, 1431
TseFI	GTSAC	1 cut(s)	434
TseI	GCWGC	6 cut(s)	4, 83, 256, 370, 1022, 1408
Tsp45I	GTSAC	1 cut(s)	434
TspDTI	ATGAA	5 cut(s)	323, 500, 557, 837, 1260
TspGWI	ACGGA	2 cut(s)	1135, 1547
TspRI	CASTG	2 cut(s)	411, 1431
Van91I	CCANNNNNTGG	1 cut(s)	1642
XapI	RAATTY	3 cut(s)	553, 616, 781
XceI	RCATGY	3 cut(s)	346, 1138, 1441
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1483
XspI	CTAG	2 cut(s)	69, 1371
ZraI	GACGTC	1 cut(s)	1588
ZrmI	AGTACT	3 cut(s)	1012, 1205, 1614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.