Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001985

Physical Location & Seq

Genomic Coordinates Forward (+)

83181036 .. 83184148

Gene Structure 3113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022412

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGCTGCCCTTGTCCAGCGGCGCCGTTTGGATGAACAGAGACGGAGAAGATGCAGTTTCTTCTTGGACCAGCAACCCCCATAACAACAATGAAACAGAGCCCAAAGACCTGACCTTGGCCAGCTTCAAAGCCATGTTAGAAGGTGACTGGTACATGAACAACAACAACGTCGTCCTCAACCAAGACAACATTAACTGCTTCTCTTCCAACCCCTTTCAACTGGACACCTCCGCTTCTTGCTCTCCGTCCAGGGCATTTACTCTTTTAAATTCAAGTCCCAATCCCAATCCCAATCCCAACTCCAAATCCTGCTTCTCTTCTCTCCCAAACTCTAATCCATTCTATAATAATTTCAATTTGGTTGGCGAAAGTGAGCTCTTGACCCAGCTTCAGCAGGAAAATGGAGCTTTGATGAACTTGGCAGCTCTTAATCCTCACTCCCAGGTGGCTGCTACTCCTGCACTCAGTTCCGGCACCGAGTTCCCCTCGAATCAGCTGCTTCCAGTATCCGGCAACACCGCCGGCTTCGAAAACTCTGGGAGTGCTCTGTTACTGAACAGGGCTGAGGATATGAGTTTCCCTTGTTCCATGGGTGGTGCACAGCCCACTCTGTATCAGAAGCGAGCTGCACTTCGCCAGAACTCCACTGGCAGCAGCGGCTGCGATATATTGGGCAACTTGGAGATTTCGGGGCCCAGTTACTCCGGCTTGGGTGTGGAGGAGAAAAGGAAGAGGAGACATAATGAGAGCGAAATGGAAGACGATATGTCTAGTTTGAATTTTTATGATGCTGATGGTCAAGCGGAGGAGGAGGAGGAGGGGAATGTGAATAATGCCGCTGGTGGAGGCTATTCTAATGCCAATAGTAGTGTCACTGATGGAGATTTCAAGGGGAAGAAGACGGGTTTACCGGCCAAAAATCTCATGGCCGAAAGGCGCCGGAGGAAGAAGCTCAACGACAGGCTCTACATGCTTAGGTCTGTAGTGCCCAAGATAAGCAAGATGGATAGAGCGTCCATACTTGGGGATGCAATTGACTATTTGAGAGAGCTTCTGGGAAGGATTGATGACCTCCATAAGGAGCTGGAATCAGCTGCACCTGGCCCTTCGTTGCAACCTTCAACAAACTTTAACCGATTGACACCAACTTCACTCACCTATCCCGGCCGTATCAAGGAGGAGCTCCGTCCTAGCTCCTTGCCAAACCCTAAAAGCCAACAACCTGCTGCAAAGGTGGATGTTCAGATAAGGGAAGGACAAGCTCTTAACATCCGCATGTTATCTCCACGCAGACCAGGTCTGTTGCTCTCTACTATGAGAGCCTTGGACAACCTTGGGTTAGACATCCAGCAGGCTGTGATCAGCTGCTTTAATGGATTTGCTCTGGATGTGTTCCGAGCTGAGCAATCCAGGGAAAGCCATTTCTTGCCTGAGCAAATTAGAGCGGTACTCTTGAAATCAGCTGGATTTGATGGTATGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

495

Amino Acids

53.91

Weight (kDa)

5.32

Isoelectric Point (pI)

58.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH_SAC51	PF23173	308 - 351	3.3e-06	Transcription factor SAC51 bHLH domain
HLH	PF00010	309 - 351	3.7e-09	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	412 - 480	6.7e-10	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12860 AT1G12860 AT1G12860 AT3G26744 AT3G26744 AT3G26744 AT3G26744 AT3G26744
fragaria_vesca	FvH4_5g09300 FvH4_5g09300
malus_domestica	MD06G1132200.v1.1 MD09G1003800.v1.1 MD14G1148600.v1.1 MD17G1007400.v1.1
prunus_persica	Prupe.3G312800_v2.0.a1 Prupe.3G312800_v2.0.a1 Prupe.5G143200_v2.0.a1
pyrus_communis	pycom06g12380 pycom111g00280 pycom14g12340 pycom17g00300
rosa_chinensis	RchiOBHm_Chr2g0176421 RchiOBHm_Chr7g0188921
rosa_laevigata	RLG00000004651 RLG00000022412
rosa_multiflora	Rmu_co8326225.1_g000001 Rmu_co8487291.1_g000001 Rmu_sc0009140.1_g000010 Rmu_sc0011904.1_g000015 Rmu_ssc0000113.1_g000008
rosa_roxburghii	Rroxscaffold_2G00076450 Rroxscaffold_3G00265940
rosa_rugosa	Rorug02G0594200 Rorug02G0594200 Rorug06G0494600
rosa_samantha	Rh2AG672700 Rh2BG684200 Rh2CG647000 Rh2DG697800 Rh7AG099500 Rh7BG101600 Rh7CG102900 Rh7DG101300
rosa_wichuraiana	Rw2G055180 Rw7G008570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1231
AccB1I	GGYRCC	3 cut(s)	20, 473, 936
AccBSI	CCGCTC	1 cut(s)	1445
AciI	CCGC	8 cut(s)	18, 231, 519, 657, 803, 837, 1273, 1445
AcoI	YGGCCR	4 cut(s)	117, 912, 927, 1165
AcsI	RAATTY	2 cut(s)	268, 778
AcuI	CTGAAG	1 cut(s)	374
AcyI	GRCGYC	2 cut(s)	21, 937
AfaI	GTAC	2 cut(s)	152, 1449
AfiI	CCNNNNNNNGG	5 cut(s)	115, 509, 1023, 1078, 1174
AgsI	TTSAA	8 cut(s)	127, 218, 273, 355, 778, 889, 1122, 1456
AhdI	GACNNNNNGTC	1 cut(s)	766
AjnI	CCWGG	5 cut(s)	248, 441, 1099, 1294, 1409
AjuI	GAANNNNNNNTTGG	2 cut(s)	296, 328
Alw21I	GWGCWC	4 cut(s)	378, 547, 601, 1185
Alw26I	GTCTC	2 cut(s)	33, 730
Alw44I	GTGCAC	1 cut(s)	597
AlwNI	CAGNNNCTG	1 cut(s)	660
AoxI	GGCC	6 cut(s)	117, 692, 912, 927, 1102, 1165
ApaI	GGGCCC	1 cut(s)	696
ApaLI	GTGCAC	1 cut(s)	597
ApoI	RAATTY	2 cut(s)	268, 778
AspLEI	GCGC	2 cut(s)	23, 939
AspS9I	GGNCC	4 cut(s)	66, 692, 693, 1103
AsuC2I	CCSGG	1 cut(s)	1164
AsuHPI	GGTGA	2 cut(s)	155, 1147
AsuII	TTCGAA	1 cut(s)	528
AvaII	GGWCC	1 cut(s)	66
BaeGI	GKGCMC	3 cut(s)	601, 696, 990
BalI	TGGCCA	1 cut(s)	119
BanI	GGYRCC	3 cut(s)	20, 473, 936
BanII	GRGCYC	4 cut(s)	102, 378, 696, 1185
BbsI	GAAGAC	2 cut(s)	765, 905
Bbv12I	GWGCWC	4 cut(s)	378, 547, 601, 1185
BbvCI	CCTCAGC	1 cut(s)	564
BccI	CCATC	4 cut(s)	788, 872, 997, 1466
BceAI	ACGGC	2 cut(s)	8, 1152
BcgI	CGANNNNNNTGC	2 cut(s)	478, 512
BciT130I	CCWGG	5 cut(s)	250, 443, 1101, 1296, 1411
BciVI	GTATCC	1 cut(s)	517
BclI	TGATCA	1 cut(s)	1359
BcnI	CCSGG	1 cut(s)	1164
BcoDI	GTCTC	2 cut(s)	33, 730
BfaI	CTAG	2 cut(s)	771, 1191
BfmI	CTRYAG	1 cut(s)	981
BfoI	RGCGCY	2 cut(s)	24, 940
BfuAI	ACCTGC	1 cut(s)	1231
BfuI	GTATCC	1 cut(s)	517
BlpI	GCTNAGC	1 cut(s)	1401
Bme1390I	CCNGG	6 cut(s)	250, 443, 1101, 1164, 1296, 1411
Bme18I	GGWCC	1 cut(s)	66
BmeRI	GACNNNNNGTC	1 cut(s)	766
BmgT120I	GGNCC	4 cut(s)	66, 692, 693, 1103
BmiI	GGNNCC	5 cut(s)	22, 475, 693, 694, 938
BmrFI	CCNGG	6 cut(s)	250, 443, 1101, 1164, 1296, 1411
BmrI	ACTGGG	1 cut(s)	690
BmsI	GCATC	3 cut(s)	40, 778, 1018
BmuI	ACTGGG	1 cut(s)	690
BpiI	GAAGAC	2 cut(s)	765, 905
BplI	GAGNNNNNCTC	4 cut(s)	470, 502, 1434, 1466
Bpu10I	CCTNAGC	3 cut(s)	564, 974, 1431
Bpu1102I	GCTNAGC	1 cut(s)	1401
Bpu14I	TTCGAA	1 cut(s)	528
BpuMI	CCSGG	1 cut(s)	1164
BsaHI	GRCGYC	2 cut(s)	21, 937
BsaJI	CCNNGG	7 cut(s)	114, 249, 441, 588, 1323, 1333, 1410
Bsc4I	CCNNNNNNNGG	5 cut(s)	115, 509, 1023, 1078, 1174
Bse118I	RCCGGY	2 cut(s)	521, 910
Bse1I	ACTGG	5 cut(s)	152, 225, 503, 652, 696
BseBI	CCWGG	5 cut(s)	250, 443, 1101, 1296, 1411
BseDI	CCNNGG	7 cut(s)	114, 249, 441, 588, 1323, 1333, 1410
BseGI	GGATG	6 cut(s)	36, 1033, 1243, 1269, 1344, 1393
BseLI	CCNNNNNNNGG	5 cut(s)	115, 509, 1023, 1078, 1174
BseMII	CTCAG	4 cut(s)	478, 555, 1392, 1422
BseNI	ACTGG	5 cut(s)	152, 225, 503, 652, 696
BseRI	GAGGAG	7 cut(s)	734, 748, 821, 824, 827, 830, 1193
BseSI	GKGCMC	3 cut(s)	601, 696, 990
BseX3I	CGGCCG	1 cut(s)	1165
BseYI	CCCAGC	1 cut(s)	384
BsgI	GTGCAG	3 cut(s)	444, 612, 1080
Bsh1285I	CGRYCG	1 cut(s)	1168
BshFI	GGCC	6 cut(s)	119, 694, 914, 929, 1104, 1167
BshNI	GGYRCC	3 cut(s)	20, 473, 936
BsiEI	CGRYCG	1 cut(s)	1168
BsiHKAI	GWGCWC	4 cut(s)	378, 547, 601, 1185
BsiSI	CCGG	7 cut(s)	471, 510, 522, 705, 911, 940, 1164
BslFI	GGGAC	1 cut(s)	261
BslI	CCNNNNNNNGG	5 cut(s)	115, 509, 1023, 1078, 1174
BsmAI	GTCTC	2 cut(s)	33, 730
BsmBI	CGTCTC	1 cut(s)	33
BsmFI	GGGAC	1 cut(s)	261
BsnI	GGCC	6 cut(s)	119, 694, 914, 929, 1104, 1167
Bsp119I	TTCGAA	1 cut(s)	528
Bsp120I	GGGCCC	1 cut(s)	692
Bsp1286I	GDGCHC	7 cut(s)	102, 378, 547, 601, 696, 990, 1185
Bsp143I	GATC	1 cut(s)	1359
Bsp1720I	GCTNAGC	1 cut(s)	1401
Bsp19I	CCATGG	1 cut(s)	588
BspACI	CCGC	8 cut(s)	18, 231, 519, 657, 803, 837, 1273, 1445
BspANI	GGCC	6 cut(s)	119, 694, 914, 929, 1104, 1167
BspCNI	CTCAG	4 cut(s)	477, 556, 1393, 1423
BspLI	GGNNCC	5 cut(s)	22, 475, 693, 694, 938
BspMI	ACCTGC	1 cut(s)	1231
BspT104I	TTCGAA	1 cut(s)	528
BspT107I	GGYRCC	3 cut(s)	20, 473, 936
BsrBI	CCGCTC	1 cut(s)	1445
BsrFI	RCCGGY	2 cut(s)	521, 910
BsrI	ACTGG	5 cut(s)	152, 225, 503, 652, 696
BssAI	RCCGGY	2 cut(s)	521, 910
BssECI	CCNNGG	7 cut(s)	114, 249, 441, 588, 1323, 1333, 1410
BssMI	GATC	1 cut(s)	1359
BssNI	GRCGYC	2 cut(s)	21, 937
BssT1I	CCWWGG	4 cut(s)	114, 588, 1323, 1333
Bst2UI	CCWGG	5 cut(s)	250, 443, 1101, 1296, 1411
Bst6I	CTCTTC	3 cut(s)	208, 322, 725
BstACI	GRCGYC	2 cut(s)	21, 937
BstAPI	GCANNNNNTGC	1 cut(s)	660
BstBI	TTCGAA	1 cut(s)	528
BstC8I	GCNNGC	4 cut(s)	121, 523, 624, 1353
BstDEI	CTNAG	5 cut(s)	464, 564, 974, 1401, 1431
BstDSI	CCRYGG	1 cut(s)	588
BstENI	CCTNNNNNAGG	1 cut(s)	1076
BstF5I	GGATG	6 cut(s)	36, 1033, 1243, 1269, 1344, 1393
BstH2I	RGCGCY	2 cut(s)	24, 940
BstHHI	GCGC	2 cut(s)	23, 939
BstKTI	GATC	1 cut(s)	1362
BstMAI	GTCTC	2 cut(s)	33, 730
BstMBI	GATC	1 cut(s)	1359
BstMCI	CGRYCG	1 cut(s)	1168
BstMWI	GCNNNNNNNGC	4 cut(s)	458, 657, 660, 970
BstNI	CCWGG	5 cut(s)	250, 443, 1101, 1296, 1411
BstNSI	RCATGY	2 cut(s)	973, 1279
BstSCI	CCNGG	6 cut(s)	248, 441, 1099, 1162, 1294, 1409
BstSFI	CTRYAG	1 cut(s)	981
BstSLI	GKGCMC	3 cut(s)	601, 696, 990
BstV2I	GAAGAC	2 cut(s)	765, 905
BstZI	CGGCCG	1 cut(s)	1165
BsuI	GTATCC	1 cut(s)	517
BsuRI	GGCC	6 cut(s)	119, 694, 914, 929, 1104, 1167
BtgI	CCRYGG	1 cut(s)	588
BtsCI	GGATG	6 cut(s)	36, 1033, 1243, 1269, 1344, 1393
BtsIMutI	CAGTG	2 cut(s)	645, 873
BveI	ACCTGC	1 cut(s)	1231
Cac8I	GCNNGC	4 cut(s)	121, 523, 624, 1353
CaiI	CAGNNNCTG	1 cut(s)	660
CfoI	GCGC	2 cut(s)	23, 939
Cfr10I	RCCGGY	2 cut(s)	521, 910
Cfr13I	GGNCC	4 cut(s)	66, 692, 693, 1103
CseI	GACGC	1 cut(s)	1002
CsiI	ACCWGGT	1 cut(s)	1294
Csp6I	GTAC	2 cut(s)	151, 1448
CviAII	CATG	6 cut(s)	133, 154, 589, 925, 970, 1276
CviQI	GTAC	2 cut(s)	151, 1448
DdeI	CTNAG	5 cut(s)	464, 564, 974, 1401, 1431
DinI	GGCGCC	2 cut(s)	22, 938
DpnI	GATC	1 cut(s)	1361
DpnII	GATC	1 cut(s)	1359
DraI	TTTAAA	1 cut(s)	267
DriI	GACNNNNNGTC	1 cut(s)	766
EaeI	YGGCCR	4 cut(s)	117, 912, 927, 1165
EagI	CGGCCG	1 cut(s)	1165
Eam1104I	CTCTTC	3 cut(s)	208, 322, 725
Eam1105I	GACNNNNNGTC	1 cut(s)	766
EarI	CTCTTC	3 cut(s)	208, 322, 725
Ecl136II	GAGCTC	2 cut(s)	376, 1183
EclXI	CGGCCG	1 cut(s)	1165
Eco130I	CCWWGG	4 cut(s)	114, 588, 1323, 1333
Eco24I	GRGCYC	4 cut(s)	102, 378, 696, 1185
Eco47I	GGWCC	1 cut(s)	66
Eco52I	CGGCCG	1 cut(s)	1165
Eco53kI	GAGCTC	2 cut(s)	376, 1183
Eco57I	CTGAAG	1 cut(s)	374
EcoICRI	GAGCTC	2 cut(s)	376, 1183
EcoNI	CCTNNNNNAGG	1 cut(s)	1076
EcoO109I	RGGNCCY	1 cut(s)	692
EcoRII	CCWGG	5 cut(s)	248, 441, 1099, 1294, 1409
EcoT14I	CCWWGG	4 cut(s)	114, 588, 1323, 1333
EcoT38I	GRGCYC	4 cut(s)	102, 378, 696, 1185
EgeI	GGCGCC	2 cut(s)	22, 938
EheI	GGCGCC	2 cut(s)	22, 938
ErhI	CCWWGG	4 cut(s)	114, 588, 1323, 1333
Esp3I	CGTCTC	1 cut(s)	33
FaeI	CATG	6 cut(s)	136, 157, 592, 928, 973, 1279
FaqI	GGGAC	1 cut(s)	261
FatI	CATG	6 cut(s)	132, 153, 588, 924, 969, 1275
FbaI	TGATCA	1 cut(s)	1359
FokI	GGATG	6 cut(s)	43, 1040, 1250, 1256, 1331, 1400
FriOI	GRGCYC	4 cut(s)	102, 378, 696, 1185
FspBI	CTAG	2 cut(s)	771, 1191
GlaI	GCGC	2 cut(s)	22, 938
GsaI	CCCAGC	1 cut(s)	388
HaeII	RGCGCY	2 cut(s)	24, 940
HaeIII	GGCC	6 cut(s)	119, 694, 914, 929, 1104, 1167
HapII	CCGG	7 cut(s)	471, 510, 522, 705, 911, 940, 1164
HgaI	GACGC	1 cut(s)	1002
HhaI	GCGC	2 cut(s)	23, 939
Hin1I	GRCGYC	2 cut(s)	21, 937
Hin1II	CATG	6 cut(s)	136, 157, 592, 928, 973, 1279
Hin6I	GCGC	2 cut(s)	21, 937
HinP1I	GCGC	2 cut(s)	21, 937
HinfI	GANTC	2 cut(s)	490, 1088
HpaII	CCGG	7 cut(s)	471, 510, 522, 705, 911, 940, 1164
HphI	GGTGA	2 cut(s)	155, 1147
Hpy166II	GTNNAC	2 cut(s)	599, 908
Hpy188I	TCNGA	3 cut(s)	618, 1245, 1397
Hpy188III	TCNNGA	3 cut(s)	379, 1385, 1453
Hpy8I	GTNNAC	2 cut(s)	599, 908
Hpy99I	CGWCG	1 cut(s)	173
HpyAV	CCTTC	5 cut(s)	134, 1053, 1116, 1128, 1247
HpyCH4IV	ACGT	1 cut(s)	168
HpyCH4V	TGCA	8 cut(s)	53, 461, 599, 629, 1031, 1097, 1114, 1229
HpyF10VI	GCNNNNNNNGC	4 cut(s)	458, 657, 660, 970
HpyF3I	CTNAG	5 cut(s)	464, 564, 974, 1401, 1431
HpySE526I	ACGT	1 cut(s)	168
Hsp92I	GRCGYC	2 cut(s)	21, 937
Hsp92II	CATG	6 cut(s)	136, 157, 592, 928, 973, 1279
HspAI	GCGC	2 cut(s)	21, 937
KasI	GGCGCC	2 cut(s)	20, 936
KroI	GCCGGC	1 cut(s)	521
KroNI	GCCGGC	1 cut(s)	523
Ksp22I	TGATCA	1 cut(s)	1359
Kzo9I	GATC	1 cut(s)	1359
LmnI	GCTCC	5 cut(s)	404, 1081, 1180, 1188, 1199
LweI	GCATC	3 cut(s)	40, 778, 1018
MabI	ACCWGGT	1 cut(s)	1294
MaeI	CTAG	2 cut(s)	771, 1191
MaeII	ACGT	1 cut(s)	168
MaeIII	GTNAC	4 cut(s)	143, 549, 698, 871
MalI	GATC	1 cut(s)	1361
MbiI	CCGCTC	1 cut(s)	1445
MboI	GATC	1 cut(s)	1359
MboII	GAAGA	9 cut(s)	51, 59, 195, 309, 742, 770, 907, 910, 958
MfeI	CAATTG	1 cut(s)	1032
MhlI	GDGCHC	7 cut(s)	102, 378, 547, 601, 696, 990, 1185
MlsI	TGGCCA	1 cut(s)	119
MluCI	AATT	6 cut(s)	268, 349, 355, 778, 1032, 1437
MluNI	TGGCCA	1 cut(s)	119
Mly113I	GGCGCC	2 cut(s)	21, 937
MmeI	TCCRAC	1 cut(s)	231
Mox20I	TGGCCA	1 cut(s)	119
MroNI	GCCGGC	1 cut(s)	521
MscI	TGGCCA	1 cut(s)	119
MseI	TTAA	6 cut(s)	192, 266, 429, 1131, 1266, 1371
MslI	CAYNNNNRTG	1 cut(s)	1274
Msp20I	TGGCCA	1 cut(s)	119
MspA1I	CMGCKG	7 cut(s)	18, 496, 657, 839, 1094, 1365, 1463
MspI	CCGG	7 cut(s)	471, 510, 522, 705, 911, 940, 1164
MspR9I	CCNGG	6 cut(s)	250, 443, 1101, 1164, 1296, 1411
MunI	CAATTG	1 cut(s)	1032
MvaI	CCWGG	5 cut(s)	250, 443, 1101, 1296, 1411
MwoI	GCNNNNNNNGC	4 cut(s)	458, 657, 660, 970
NaeI	GCCGGC	1 cut(s)	523
NarI	GGCGCC	2 cut(s)	21, 937
NciI	CCSGG	1 cut(s)	1164
NcoI	CCATGG	1 cut(s)	588
NdeII	GATC	1 cut(s)	1359
NgoMIV	GCCGGC	1 cut(s)	521
NlaIII	CATG	6 cut(s)	136, 157, 592, 928, 973, 1279
NlaIV	GGNNCC	5 cut(s)	22, 475, 693, 694, 938
NmuCI	GTSAC	2 cut(s)	143, 871
NspI	RCATGY	2 cut(s)	973, 1279
NspV	TTCGAA	1 cut(s)	528
PdiI	GCCGGC	1 cut(s)	523
PfeI	GAWTC	2 cut(s)	490, 1088
PflFI	GACNNNGTC	1 cut(s)	1296
PluTI	GGCGCC	2 cut(s)	24, 940
Psp124BI	GAGCTC	2 cut(s)	378, 1185
Psp6I	CCWGG	5 cut(s)	248, 441, 1099, 1294, 1409
PspFI	CCCAGC	1 cut(s)	384
PspGI	CCWGG	5 cut(s)	248, 441, 1099, 1294, 1409
PspN4I	GGNNCC	5 cut(s)	22, 475, 693, 694, 938
PspOMI	GGGCCC	1 cut(s)	692
PspPI	GGNCC	4 cut(s)	66, 692, 693, 1103
PstNI	CAGNNNCTG	1 cut(s)	660
PsyI	GACNNNGTC	1 cut(s)	1296
PvuII	CAGCTG	4 cut(s)	496, 1094, 1365, 1463
RsaI	GTAC	2 cut(s)	152, 1449
RsaNI	GTAC	2 cut(s)	151, 1448
RseI	CAYNNNNRTG	1 cut(s)	1274
SacI	GAGCTC	2 cut(s)	378, 1185
SaqAI	TTAA	6 cut(s)	192, 266, 429, 1131, 1266, 1371
Sau3AI	GATC	1 cut(s)	1359
Sau96I	GGNCC	4 cut(s)	66, 692, 693, 1103
ScrFI	CCNGG	6 cut(s)	250, 443, 1101, 1164, 1296, 1411
SduI	GDGCHC	7 cut(s)	102, 378, 547, 601, 696, 990, 1185
SexAI	ACCWGGT	1 cut(s)	1294
SfaNI	GCATC	3 cut(s)	40, 778, 1018
SfcI	CTRYAG	1 cut(s)	981
SfoI	GGCGCC	2 cut(s)	22, 938
SfuI	TTCGAA	1 cut(s)	528
SinI	GGWCC	1 cut(s)	66
SmiMI	CAYNNNNRTG	1 cut(s)	1274
Sse9I	AATT	6 cut(s)	268, 349, 355, 778, 1032, 1437
SsiI	CCGC	8 cut(s)	18, 231, 519, 657, 803, 837, 1273, 1445
SspDI	GGCGCC	2 cut(s)	20, 936
SspMI	CTAG	2 cut(s)	771, 1191
SstI	GAGCTC	2 cut(s)	378, 1185
StyD4I	CCNGG	6 cut(s)	248, 441, 1099, 1162, 1294, 1409
StyI	CCWWGG	4 cut(s)	114, 588, 1323, 1333
TaiI	ACGT	1 cut(s)	171
TaqI	TCGA	2 cut(s)	488, 528
TasI	AATT	6 cut(s)	268, 349, 355, 778, 1032, 1437
TauI	GCSGC	3 cut(s)	21, 660, 839
TfiI	GAWTC	2 cut(s)	490, 1088
Tru1I	TTAA	6 cut(s)	192, 266, 429, 1131, 1266, 1371
Tru9I	TTAA	6 cut(s)	192, 266, 429, 1131, 1266, 1371
TscAI	CASTG	2 cut(s)	652, 880
TseFI	GTSAC	2 cut(s)	143, 871
Tsp45I	GTSAC	2 cut(s)	143, 871
TspDTI	ATGAA	4 cut(s)	47, 105, 170, 428
TspGWI	ACGGA	3 cut(s)	57, 234, 1175
TspRI	CASTG	2 cut(s)	652, 880
Tth111I	GACNNNGTC	1 cut(s)	1296
VneI	GTGCAC	1 cut(s)	597
VpaK11BI	GGWCC	1 cut(s)	66
XagI	CCTNNNNNAGG	1 cut(s)	1076
XapI	RAATTY	2 cut(s)	268, 778
XceI	RCATGY	2 cut(s)	973, 1279
XcmI	CCANNNNNNNNNTGG	2 cut(s)	644, 922
XspI	CTAG	2 cut(s)	771, 1191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.