FvH4_5g16260

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
9273292 .. 9274907
1616 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g16260.t1

Sequence Viewer

Length: 1287 bp
ATGGCCAGCCTTTCTTCGGTGCCATCAAGGATCGCTACGATTTTTTCTACAACCAAGGTCGTGACTGTTCTCGATGCCATAAGCTTTCCGATTCTCTTCGACAACTCCAAAGTTGAAAAACGTGACATCTTTGATGGCACTTACATGCCCTCCACAGACTTCACCGGTGGCTATCGCATTTGCTCATTTCTAGACCCATCGGAACCCAAACACACTTCTCTAAAAAAATTCTTCTTGTCTCTACTCTCTGCTAACCACAAGAATGTTATACCACTTTTCCATACCCACTTCACCGATCTATTTGTCCAAGCCGAGGCTCAGTTGTTAAAAGATGGCAAGTCAGACTTTAACACACTGAATGACAAAACTTCCTTCGACTTCATCTTTGAGCTGTTCTTCGGGAAACACCCGTCGGACACAAATCTGGGGTCGAAAGGATCAACCTTGGTTACCCTTTGGCTCTTACCTCAACTTACTCCTCAGATCACACTAGGGTTGCCAAAGTTTTTCAATGTTTTCGAAGATTTCTTGCTTCACACGTTTCCCTTCCCGGCTCTTTTTGTCAAACCAGCTTACAACAAGGTTTACAAGGCCTTTTACGAGTCGGCAGCTAAGGCCTTGGACGAGGCTGAGAGTAATTTCGGGATTTCAAGAGACGAAGCATGCCACAACCTCGTGTTCTTGGTTTGCTTCAATGCTTATGGTGGCATGAAGCTTTTGTTCCCTTCCTTGTTGAAATGGGTTGGACTAGCAGGAGAGGATCTGCACCGCAAGCTTCGAGATGAAATCAGACAAGCTGTTAAAGAAGCTGGAGGTAAGATTACTCTTGCAGCTTTGGAAAAGATGACCCTAACCAAGTCAGTGGTTTATGAGGCTTTGAGGATTGATCCTTCCGTCCCGTTCCAATACGGAAAGGCTAAGGAGGATCTAATTATCGAGAGCCATGACGCTGCGTTTGAGATAAAAAAGGGAGAAGTAATCTTCGGGTATCAGACCATTGCTACTAGGGATGGAAAGATATTCAAGAACCCCGAGGAGTTTATAGGTGACAGGTTTGTAGGGGAGGGCGAGAAGCTACTGAAGTACGTGTGGTGGTCCAACGGCCCCGAGACGGTGAGTCCGTCCGCCGAGGACAAGCAGTGCGCCGGGAAGGATCTGGTGGTGCTCATGAACCGGATGATGTTGGTCGAGTTCTTCCTTCGTTATGATACGTTTACCCTCGACGTCGGGACGTTCTTGTTAGGTTCAAAAGTGACGTTCAAAACTTTGACCCCAGCTTCGTACTGA

Protein Analysis

429

Amino Acids

48.16

Weight (kDa)

6.34

Isoelectric Point (pI)

29.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 255 - 357 3.2e-15 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1227
AccB1I GGYRCC 1 cut(s) 19
AciI CCGC 2 cut(s) 769, 1125
AclWI GGATC 6 cut(s) 38, 445, 768, 881, 933, 1161
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 227
AcuI CTGAAG 1 cut(s) 1100
AcyI GRCGYC 1 cut(s) 1224
AfaI GTAC 2 cut(s) 1085, 1283
AfiI CCNNNNNNNGG 3 cut(s) 16, 313, 1111
AflIII ACRYGT 2 cut(s) 537, 1086
AgeI ACCGGT 1 cut(s) 164
AgsI TTSAA 8 cut(s) 116, 511, 651, 694, 736, 1024, 1248, 1261
AhdI GACNNNNNGTC 1 cut(s) 1116
Alw21I GWGCWC 1 cut(s) 1167
Alw26I GTCTC 3 cut(s) 243, 648, 1103
AlwI GGATC 6 cut(s) 38, 445, 768, 881, 933, 1161
Ama87I CYCGRG 2 cut(s) 1031, 1106
AoxI GGCC 4 cut(s) 3, 591, 615, 1102
ApeKI GCWGC 3 cut(s) 608, 830, 950
ApoI RAATTY 1 cut(s) 227
ArsI GACNNNNNNTTYG 7 cut(s) 368, 400, 413, 445, 938, 970, 1261
AsiGI ACCGGT 1 cut(s) 164
AspLEI GCGC 1 cut(s) 1145
AspS9I GGNCC 2 cut(s) 1095, 1103
AsuC2I CCSGG 2 cut(s) 551, 1147
AsuHPI GGTGA 4 cut(s) 154, 283, 1058, 1126
AsuII TTCGAA 1 cut(s) 519
AvaI CYCGRG 2 cut(s) 1031, 1106
AvaII GGWCC 1 cut(s) 1095
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 19
BauI CACGAG 1 cut(s) 674
Bbv12I GWGCWC 1 cut(s) 1167
BbvI GCAGC 3 cut(s) 620, 842, 937
BccI CCATC 5 cut(s) 31, 128, 205, 326, 1004
BceAI ACGGC 1 cut(s) 1117
BcnI CCSGG 2 cut(s) 551, 1147
BcoDI GTCTC 3 cut(s) 243, 648, 1103
BfaI CTAG 4 cut(s) 191, 491, 749, 1005
BisI GCNGC 3 cut(s) 609, 831, 951
BlsI GCNGC 3 cut(s) 610, 832, 952
Bme1390I CCNGG 2 cut(s) 551, 1147
Bme18I GGWCC 1 cut(s) 1095
BmeRI GACNNNNNGTC 1 cut(s) 1116
BmeT110I CYCGRG 2 cut(s) 1031, 1106
BmgT120I GGNCC 2 cut(s) 1095, 1103
BmiI GGNNCC 3 cut(s) 21, 204, 1105
BmrFI CCNGG 2 cut(s) 551, 1147
BmsI GCATC 1 cut(s) 64
BpmI CTGGAG 1 cut(s) 831
Bpu10I CCTNAGC 2 cut(s) 612, 918
Bpu14I TTCGAA 1 cut(s) 519
BpuMI CCSGG 2 cut(s) 551, 1147
BsaAI YACGTR 1 cut(s) 1087
BsaHI GRCGYC 1 cut(s) 1224
BsaJI CCNNGG 6 cut(s) 54, 312, 444, 618, 1032, 1128
BsaWI WCCGGW 2 cut(s) 164, 1173
BsaXI ACNNNNNCTCC 2 cut(s) 134, 164
Bsc4I CCNNNNNNNGG 3 cut(s) 16, 313, 1111
Bse118I RCCGGY 1 cut(s) 164
Bse3DI GCAATG 1 cut(s) 996
BseDI CCNNGG 6 cut(s) 54, 312, 444, 618, 1032, 1128
BseGI GGATG 2 cut(s) 1015, 1182
BseLI CCNNNNNNNGG 3 cut(s) 16, 313, 1111
BseMI GCAATG 1 cut(s) 996
BseMII CTCAG 3 cut(s) 332, 494, 621
BseRI GAGGAG 2 cut(s) 468, 1049
BseXI GCAGC 3 cut(s) 620, 842, 937
BseYI CCCAGC 1 cut(s) 1273
BsgI GTGCAG 1 cut(s) 749
BshFI GGCC 4 cut(s) 5, 593, 617, 1104
BshNI GGYRCC 1 cut(s) 19
BshTI ACCGGT 1 cut(s) 164
BsiHKAI GWGCWC 1 cut(s) 1167
BsiHKCI CYCGRG 2 cut(s) 1031, 1106
BsiSI CCGG 4 cut(s) 165, 551, 1146, 1174
BslFI GGGAC 2 cut(s) 881, 1243
BslI CCNNNNNNNGG 3 cut(s) 16, 313, 1111
BsmAI GTCTC 3 cut(s) 243, 648, 1103
BsmBI CGTCTC 2 cut(s) 648, 1103
BsmFI GGGAC 2 cut(s) 881, 1243
BsnI GGCC 4 cut(s) 5, 593, 617, 1104
BsoBI CYCGRG 2 cut(s) 1031, 1106
Bsp119I TTCGAA 1 cut(s) 519
Bsp1286I GDGCHC 1 cut(s) 1167
Bsp143I GATC 8 cut(s) 30, 295, 437, 483, 760, 886, 925, 1153
BspACI CCGC 2 cut(s) 769, 1125
BspANI GGCC 4 cut(s) 5, 593, 617, 1104
BspCNI CTCAG 3 cut(s) 331, 493, 622
BspHI TCATGA 1 cut(s) 1167
BspLI GGNNCC 3 cut(s) 21, 204, 1105
BspPI GGATC 6 cut(s) 38, 445, 768, 881, 933, 1161
BspT104I TTCGAA 1 cut(s) 519
BspT107I GGYRCC 1 cut(s) 19
BsrDI GCAATG 1 cut(s) 996
BsrFI RCCGGY 1 cut(s) 164
BssAI RCCGGY 1 cut(s) 164
BssECI CCNNGG 6 cut(s) 54, 312, 444, 618, 1032, 1128
BssMI GATC 8 cut(s) 30, 295, 437, 483, 760, 886, 925, 1153
BssNI GRCGYC 1 cut(s) 1224
BssSI CACGAG 1 cut(s) 674
BssT1I CCWWGG 3 cut(s) 54, 444, 618
Bst2BI CACGAG 1 cut(s) 674
Bst4CI ACNGT 2 cut(s) 67, 1114
Bst6I CTCTTC 1 cut(s) 101
BstACI GRCGYC 1 cut(s) 1224
BstBAI YACGTR 1 cut(s) 1087
BstBI TTCGAA 1 cut(s) 519
BstC8I GCNNGC 3 cut(s) 7, 664, 773
BstDEI CTNAG 5 cut(s) 318, 480, 612, 630, 918
BstEII GGTNACC 1 cut(s) 448
BstF5I GGATG 2 cut(s) 1015, 1182
BstHHI GCGC 1 cut(s) 1145
BstKTI GATC 8 cut(s) 33, 298, 440, 486, 763, 889, 928, 1156
BstMAI GTCTC 3 cut(s) 243, 648, 1103
BstMBI GATC 8 cut(s) 30, 295, 437, 483, 760, 886, 925, 1153
BstMWI GCNNNNNNNGC 2 cut(s) 614, 772
BstNSI RCATGY 2 cut(s) 148, 666
BstPI GGTNACC 1 cut(s) 448
BstSCI CCNGG 2 cut(s) 549, 1145
BstV1I GCAGC 3 cut(s) 620, 842, 937
BstX2I RGATCY 3 cut(s) 760, 925, 1153
BstXI CCANNNNNNTGG 1 cut(s) 862
BstYI RGATCY 3 cut(s) 760, 925, 1153
BsuRI GGCC 4 cut(s) 5, 593, 617, 1104
BtsCI GGATG 2 cut(s) 1015, 1182
BtsI GCAGTG 1 cut(s) 1145
BtsIMutI CAGTG 3 cut(s) 353, 867, 1145
Cac8I GCNNGC 3 cut(s) 7, 664, 773
CciI TCATGA 1 cut(s) 1167
CfoI GCGC 1 cut(s) 1145
Cfr10I RCCGGY 1 cut(s) 164
Cfr13I GGNCC 2 cut(s) 1095, 1103
CseI GACGC 1 cut(s) 956
Csp6I GTAC 2 cut(s) 1084, 1282
CspAI ACCGGT 1 cut(s) 164
CviAII CATG 5 cut(s) 145, 663, 709, 944, 1168
CviQI GTAC 2 cut(s) 1084, 1282
DdeI CTNAG 5 cut(s) 318, 480, 612, 630, 918
DpnI GATC 8 cut(s) 32, 297, 439, 485, 762, 888, 927, 1155
DpnII GATC 8 cut(s) 30, 295, 437, 483, 760, 886, 925, 1153
DriI GACNNNNNGTC 1 cut(s) 1116
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 101
Eam1105I GACNNNNNGTC 1 cut(s) 1116
EarI CTCTTC 1 cut(s) 101
EciI GGCGGA 1 cut(s) 1114
Eco130I CCWWGG 3 cut(s) 54, 444, 618
Eco147I AGGCCT 2 cut(s) 593, 617
Eco47I GGWCC 1 cut(s) 1095
Eco57I CTGAAG 1 cut(s) 1100
Eco88I CYCGRG 2 cut(s) 1031, 1106
Eco91I GGTNACC 1 cut(s) 448
EcoO65I GGTNACC 1 cut(s) 448
EcoT14I CCWWGG 3 cut(s) 54, 444, 618
ErhI CCWWGG 3 cut(s) 54, 444, 618
Esp3I CGTCTC 2 cut(s) 648, 1103
FaeI CATG 5 cut(s) 148, 666, 712, 947, 1171
FalI AAGNNNNNCTT 2 cut(s) 329, 361
FaqI GGGAC 2 cut(s) 881, 1243
FatI CATG 5 cut(s) 144, 662, 708, 943, 1167
Fnu4HI GCNGC 3 cut(s) 609, 831, 951
FokI GGATG 2 cut(s) 1022, 1189
Fsp4HI GCNGC 3 cut(s) 609, 831, 951
FspBI CTAG 4 cut(s) 191, 491, 749, 1005
GlaI GCGC 1 cut(s) 1144
GluI GCNGC 3 cut(s) 609, 831, 951
GsaI CCCAGC 1 cut(s) 1277
GsuI CTGGAG 1 cut(s) 831
HaeIII GGCC 4 cut(s) 5, 593, 617, 1104
HapII CCGG 4 cut(s) 165, 551, 1146, 1174
HgaI GACGC 1 cut(s) 956
HhaI GCGC 1 cut(s) 1145
Hin1I GRCGYC 1 cut(s) 1224
Hin1II CATG 5 cut(s) 148, 666, 712, 947, 1171
Hin6I GCGC 1 cut(s) 1143
HinP1I GCGC 1 cut(s) 1143
HindIII AAGCTT 3 cut(s) 82, 713, 773
HinfI GANTC 3 cut(s) 91, 602, 1117
HpaII CCGG 4 cut(s) 165, 551, 1146, 1174
HphI GGTGA 4 cut(s) 154, 283, 1058, 1126
Hpy166II GTNNAC 2 cut(s) 586, 1215
Hpy188I TCNGA 7 cut(s) 90, 202, 343, 415, 483, 791, 993
Hpy8I GTNNAC 2 cut(s) 586, 1215
Hpy99I CGWCG 3 cut(s) 415, 1226, 1229
HpyAV CCTTC 6 cut(s) 382, 556, 735, 900, 1144, 1208
HpyCH4III ACNGT 2 cut(s) 67, 1114
HpyCH4IV ACGT 7 cut(s) 121, 539, 1086, 1211, 1224, 1232, 1256
HpyCH4V TGCA 2 cut(s) 766, 830
HpyF10VI GCNNNNNNNGC 2 cut(s) 614, 772
HpyF3I CTNAG 5 cut(s) 318, 480, 612, 630, 918
HpySE526I ACGT 7 cut(s) 121, 539, 1086, 1211, 1224, 1232, 1256
Hsp92I GRCGYC 1 cut(s) 1224
Hsp92II CATG 5 cut(s) 148, 666, 712, 947, 1171
HspAI GCGC 1 cut(s) 1143
Kzo9I GATC 8 cut(s) 30, 295, 437, 483, 760, 886, 925, 1153
Lsp1109I GCAGC 3 cut(s) 620, 842, 937
LweI GCATC 1 cut(s) 64
MaeI CTAG 4 cut(s) 191, 491, 749, 1005
MaeII ACGT 7 cut(s) 121, 539, 1086, 1211, 1224, 1232, 1256
MaeIII GTNAC 5 cut(s) 61, 122, 448, 1046, 1252
MalI GATC 8 cut(s) 32, 297, 439, 485, 762, 888, 927, 1155
MboI GATC 8 cut(s) 30, 295, 437, 483, 760, 886, 925, 1153
MboII GAAGA 7 cut(s) 6, 88, 223, 388, 533, 973, 1186
MflI RGATCY 3 cut(s) 760, 925, 1153
MhlI GDGCHC 1 cut(s) 1167
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 3 cut(s) 227, 637, 930
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 611, 1126
MmeI TCCRAC 3 cut(s) 393, 724, 1122
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 326, 348, 801
MslI CAYNNNNRTG 2 cut(s) 143, 261
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 4 cut(s) 165, 551, 1146, 1174
MspR9I CCNGG 2 cut(s) 551, 1147
MwoI GCNNNNNNNGC 2 cut(s) 614, 772
NciI CCSGG 2 cut(s) 551, 1147
NdeII GATC 8 cut(s) 30, 295, 437, 483, 760, 886, 925, 1153
NlaIII CATG 5 cut(s) 148, 666, 712, 947, 1171
NlaIV GGNNCC 3 cut(s) 21, 204, 1105
NmeAIII GCCGAG 2 cut(s) 337, 1153
NmuCI GTSAC 4 cut(s) 61, 122, 1046, 1252
NspI RCATGY 2 cut(s) 148, 666
NspV TTCGAA 1 cut(s) 519
PaeI GCATGC 1 cut(s) 666
PagI TCATGA 1 cut(s) 1167
PceI AGGCCT 2 cut(s) 593, 617
PcsI WCGNNNNNNNCGW 1 cut(s) 1118
PfeI GAWTC 1 cut(s) 91
PinAI ACCGGT 1 cut(s) 164
PkrI GCNGC 3 cut(s) 610, 832, 952
PleI GAGTC 2 cut(s) 610, 1125
PpsI GAGTC 2 cut(s) 610, 1125
Ppu21I YACGTR 1 cut(s) 1087
PspEI GGTNACC 1 cut(s) 448
PspFI CCCAGC 1 cut(s) 1273
PspN4I GGNNCC 3 cut(s) 21, 204, 1105
PspPI GGNCC 2 cut(s) 1095, 1103
PsuI RGATCY 3 cut(s) 760, 925, 1153
RsaI GTAC 2 cut(s) 1085, 1283
RsaNI GTAC 2 cut(s) 1084, 1282
RseI CAYNNNNRTG 2 cut(s) 143, 261
SaqAI TTAA 3 cut(s) 326, 348, 801
SatI GCNGC 3 cut(s) 609, 831, 951
Sau3AI GATC 8 cut(s) 30, 295, 437, 483, 760, 886, 925, 1153
Sau96I GGNCC 2 cut(s) 1095, 1103
SchI GAGTC 2 cut(s) 611, 1126
ScrFI CCNGG 2 cut(s) 551, 1147
SduI GDGCHC 1 cut(s) 1167
SfaNI GCATC 1 cut(s) 64
SfuI TTCGAA 1 cut(s) 519
SgrAI CRCCGGYG 1 cut(s) 164
SinI GGWCC 1 cut(s) 1095
SmiMI CAYNNNNRTG 2 cut(s) 143, 261
SphI GCATGC 1 cut(s) 666
Sse9I AATT 3 cut(s) 227, 637, 930
SseBI AGGCCT 2 cut(s) 593, 617
SsiI CCGC 2 cut(s) 769, 1125
SspMI CTAG 4 cut(s) 191, 491, 749, 1005
StuI AGGCCT 2 cut(s) 593, 617
StyD4I CCNGG 2 cut(s) 549, 1145
StyI CCWWGG 3 cut(s) 54, 444, 618
TaaI ACNGT 2 cut(s) 67, 1114
TaiI ACGT 7 cut(s) 124, 542, 1089, 1214, 1227, 1235, 1259
TaqI TCGA 9 cut(s) 72, 99, 375, 431, 519, 778, 936, 1188, 1221
TasI AATT 3 cut(s) 227, 637, 930
TfiI GAWTC 1 cut(s) 91
Tru1I TTAA 3 cut(s) 326, 348, 801
Tru9I TTAA 3 cut(s) 326, 348, 801
TscAI CASTG 3 cut(s) 360, 867, 1145
TseFI GTSAC 4 cut(s) 61, 122, 1046, 1252
TseI GCWGC 3 cut(s) 608, 830, 950
Tsp45I GTSAC 4 cut(s) 61, 122, 1046, 1252
TspDTI ATGAA 4 cut(s) 370, 725, 798, 1184
TspGWI ACGGA 3 cut(s) 883, 924, 1110
TspRI CASTG 3 cut(s) 360, 867, 1145
VpaK11BI GGWCC 1 cut(s) 1095
XapI RAATTY 1 cut(s) 227
XbaI TCTAGA 1 cut(s) 190
XceI RCATGY 2 cut(s) 148, 666
XspI CTAG 4 cut(s) 191, 491, 749, 1005
ZraI GACGTC 1 cut(s) 1225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.