Rroxscaffold_7G00207490

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
57375964 .. 57377265
1302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00207490.1

Sequence Viewer

Length: 1302 bp
ATGGCAAAGTACAAGTCCACAGTTTTCCGAACCAACATGCCTCCCGGTCCCTTCATTGCTTCGAATCCAAAGGTTGTCGTAGTTCTTGACGCCAAAAGCTTTCCTATCCTCTTCGACAATTCGAGAGTAGAAAAACGTAACATATTTGATGGCACTTACATGCCTTCCACTTCCTTCACCGGTGGCTATCGCATTTGCTCTTTTCTCGACCCTTCGGAACCCAAACACACTTCTCTCAAAAACTTCTTCTTGTCTCTACTCTCTGCTCGCCACAACAATGTTATCCCACTTTTCCAAACTCACTTCTCCGACCTCTTTGTCAAGGCCGAAGCTCAACTGGCCAAAGATGTCAAATCGGACTTCAACTCACTCAATGACCAAACTTCTTTCAACTTCATCTTTGACCTGTTCTTCGGTCAAAACCCGTTAAGCACACCATTGGGATCCAAAGGCGCAACCCTTGTCACACTCTGGCTCTTACCCCAACTCACTCCTCAGATAACACTGGGATTGCCCAAGTTGCTGAACGTTCTAGAAGATTTCTTGCTGCACACGTTTCCCTTTCCCGCCCTTCTTGTCAAACCCGCTTATAACAAGCTCTACAAGGCTTTTTATGAGTCCGCAGCCAAGGCTTTGGAAGAGGCTGAGGGTACTTTTGGGATTTCAAAAGACGAAGCTTGCCACAACCTGATCTTCATGGTGTGCTTCAATGCTTATGGTGGCATGAAGCTCTTATTCCCTATTTTGCTGAAGTGGGTCTGTTTAGCTGGAAAGGATCTCCACGGCAAGCTCCGAGAGGAAATAAGGGCCGCTGTTAAAGATGCTGGAGGTAAGGTTACTCTTGCAGCGTTGGATAAGATGACATTGACCAAGTCGGTGGTTTATGAAGCTCTGAGGATTGATCCTGCGGTCCCGTTCCAGTATGCGAAGGCCAAGGAGGATCTGATAATCAACAGCCACGATGCCAGTTTTCAGATCAAGAAGGGAGAAGTGATCTTCGGATATCAGACCATTGCCACTAGAGATCCAAAGATCTTCGAGAGGCCTGACGAGTTTGCAGGAGATAGGTTTGTTGGGGATGGAGAGAAGCTATTGAAGTACGTGTGGTGGTCCAACGGCCCGGAGACGGAGAACGCAACGGTCGCGAATAAGATTTGCGCGGGGAAGGACCTGGTTGTGCTGATGAACAGGATAATGTTGGTCGAGTTCTTCCTTCGTTATGACACTTTTACTGCCGATATTGGCACCTTTTTGTTGGGACCAAAAGTGACGTTTAAAACCTTGACCAAGGCTTCATCATGA

Protein Analysis

433

Amino Acids

48.43

Weight (kDa)

8.82

Isoelectric Point (pI)

30.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 259 - 360 2.7e-15 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 591
AasI GACNNNNNNGTC 1 cut(s) 317
AccB1I GGYRCC 1 cut(s) 1244
AccII CGCG 2 cut(s) 1145, 1160
AciI CCGC 6 cut(s) 567, 585, 621, 810, 908, 1160
AclI AACGTT 1 cut(s) 528
AclWI GGATC 6 cut(s) 438, 451, 783, 896, 948, 1019
AcoI YGGCCR 1 cut(s) 339
AcuI CTGAAG 1 cut(s) 770
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 3 cut(s) 11, 652, 1100
AfiI CCNNNNNNNGG 1 cut(s) 1126
AflIII ACRYGT 2 cut(s) 552, 1101
AgeI ACCGGT 1 cut(s) 179
AgsI TTSAA 5 cut(s) 364, 391, 666, 709, 1096
AjnI CCWGG 1 cut(s) 1170
AluBI AGCT 9 cut(s) 99, 332, 598, 677, 730, 767, 790, 890, 1090
AluI AGCT 9 cut(s) 99, 332, 598, 677, 730, 767, 790, 890, 1090
Alw26I GTCTC 2 cut(s) 258, 1118
AlwI GGATC 6 cut(s) 438, 451, 783, 896, 948, 1019
AoxI GGCC 6 cut(s) 324, 339, 807, 930, 1043, 1117
ApeKI GCWGC 3 cut(s) 547, 623, 845
ArsI GACNNNNNNTTYG 3 cut(s) 31, 395, 427
AsiGI ACCGGT 1 cut(s) 179
AspLEI GCGC 2 cut(s) 455, 1160
AspS9I GGNCC 7 cut(s) 47, 807, 910, 1110, 1118, 1168, 1259
AsuC2I CCSGG 2 cut(s) 45, 1121
AsuHPI GGTGA 1 cut(s) 169
AsuII TTCGAA 1 cut(s) 62
AvaII GGWCC 5 cut(s) 47, 910, 1110, 1168, 1259
BalI TGGCCA 1 cut(s) 341
BamHI GGATCC 1 cut(s) 443
BanI GGYRCC 1 cut(s) 1244
BbvCI CCTCAGC 1 cut(s) 645
BbvI GCAGC 3 cut(s) 534, 635, 857
BccI CCATC 2 cut(s) 143, 1073
BceAI ACGGC 2 cut(s) 799, 1132
BciT130I CCWGG 1 cut(s) 1172
BcnI CCSGG 2 cut(s) 45, 1121
BcoDI GTCTC 2 cut(s) 258, 1118
BfaI CTAG 2 cut(s) 533, 1020
BglII AGATCT 1 cut(s) 1032
BisI GCNGC 4 cut(s) 548, 624, 810, 846
BlsI GCNGC 4 cut(s) 549, 625, 811, 847
Bme1390I CCNGG 3 cut(s) 45, 1121, 1172
Bme18I GGWCC 5 cut(s) 47, 910, 1110, 1168, 1259
BmgT120I GGNCC 7 cut(s) 47, 807, 910, 1110, 1118, 1168, 1259
BmiI GGNNCC 6 cut(s) 49, 219, 445, 912, 1246, 1260
BmrFI CCNGG 3 cut(s) 45, 1121, 1172
BmrI ACTGGG 1 cut(s) 515
BmsI GCATC 2 cut(s) 811, 952
BmuI ACTGGG 1 cut(s) 515
BpmI CTGGAG 1 cut(s) 846
Bpu10I CCTNAGC 1 cut(s) 645
Bpu14I TTCGAA 1 cut(s) 62
BpuMI CCSGG 2 cut(s) 45, 1121
BsaAI YACGTR 1 cut(s) 1102
BsaHI GRCGYC 1 cut(s) 90
BsaJI CCNNGG 4 cut(s) 627, 781, 933, 1287
BsaWI WCCGGW 1 cut(s) 179
BsaXI ACNNNNNCTCC 2 cut(s) 819, 849
Bsc4I CCNNNNNNNGG 1 cut(s) 1126
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 4 cut(s) 342, 510, 919, 966
Bse3DI GCAATG 2 cut(s) 54, 1011
BseBI CCWGG 1 cut(s) 1172
BseDI CCNNGG 4 cut(s) 627, 781, 933, 1287
BseGI GGATG 1 cut(s) 1084
BseLI CCNNNNNNNGG 1 cut(s) 1126
BseMI GCAATG 2 cut(s) 54, 1011
BseMII CTCAG 3 cut(s) 509, 636, 884
BseNI ACTGG 4 cut(s) 342, 510, 919, 966
BseRI GAGGAG 1 cut(s) 483
BseXI GCAGC 3 cut(s) 534, 635, 857
BsgI GTGCAG 1 cut(s) 533
Bsh1236I CGCG 2 cut(s) 1145, 1160
Bsh1285I CGRYCG 1 cut(s) 1143
BshFI GGCC 6 cut(s) 326, 341, 809, 932, 1045, 1119
BshNI GGYRCC 1 cut(s) 1244
BshTI ACCGGT 1 cut(s) 179
BsiEI CGRYCG 1 cut(s) 1143
BsiSI CCGG 3 cut(s) 45, 180, 1121
BslFI GGGAC 3 cut(s) 33, 896, 1272
BslI CCNNNNNNNGG 1 cut(s) 1126
BsmAI GTCTC 2 cut(s) 258, 1118
BsmBI CGTCTC 1 cut(s) 1118
BsmFI GGGAC 3 cut(s) 33, 896, 1272
BsnI GGCC 6 cut(s) 326, 341, 809, 932, 1045, 1119
Bsp119I TTCGAA 1 cut(s) 62
Bsp143I GATC 9 cut(s) 443, 690, 775, 901, 940, 975, 993, 1024, 1032
Bsp68I TCGCGA 1 cut(s) 1145
BspACI CCGC 6 cut(s) 567, 585, 621, 810, 908, 1160
BspANI GGCC 6 cut(s) 326, 341, 809, 932, 1045, 1119
BspCNI CTCAG 3 cut(s) 508, 637, 885
BspFNI CGCG 2 cut(s) 1145, 1160
BspHI TCATGA 1 cut(s) 1298
BspLI GGNNCC 6 cut(s) 49, 219, 445, 912, 1246, 1260
BspPI GGATC 6 cut(s) 438, 451, 783, 896, 948, 1019
BspT104I TTCGAA 1 cut(s) 62
BspT107I GGYRCC 1 cut(s) 1244
BsrDI GCAATG 2 cut(s) 54, 1011
BsrFI RCCGGY 1 cut(s) 179
BsrI ACTGG 4 cut(s) 342, 510, 919, 966
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 4 cut(s) 627, 781, 933, 1287
BssMI GATC 9 cut(s) 443, 690, 775, 901, 940, 975, 993, 1024, 1032
BssNI GRCGYC 1 cut(s) 90
BssT1I CCWWGG 3 cut(s) 627, 933, 1287
Bst2UI CCWGG 1 cut(s) 1172
Bst4CI ACNGT 2 cut(s) 22, 1141
Bst6I CTCTTC 2 cut(s) 116, 633
BstACI GRCGYC 1 cut(s) 90
BstBAI YACGTR 1 cut(s) 1102
BstBI TTCGAA 1 cut(s) 62
BstC8I GCNNGC 3 cut(s) 268, 679, 788
BstDEI CTNAG 3 cut(s) 495, 645, 893
BstDSI CCRYGG 1 cut(s) 781
BstF5I GGATG 1 cut(s) 1084
BstFNI CGCG 2 cut(s) 1145, 1160
BstHHI GCGC 2 cut(s) 455, 1160
BstKTI GATC 9 cut(s) 446, 693, 778, 904, 943, 978, 996, 1027, 1035
BstMAI GTCTC 2 cut(s) 258, 1118
BstMBI GATC 9 cut(s) 443, 690, 775, 901, 940, 975, 993, 1024, 1032
BstMCI CGRYCG 1 cut(s) 1143
BstMWI GCNNNNNNNGC 4 cut(s) 338, 520, 629, 1142
BstNI CCWGG 1 cut(s) 1172
BstNSI RCATGY 2 cut(s) 40, 163
BstSCI CCNGG 3 cut(s) 43, 1119, 1170
BstUI CGCG 2 cut(s) 1145, 1160
BstV1I GCAGC 3 cut(s) 534, 635, 857
BstX2I RGATCY 5 cut(s) 443, 775, 940, 1024, 1032
BstXI CCANNNNNNTGG 2 cut(s) 634, 877
BstYI RGATCY 5 cut(s) 443, 775, 940, 1024, 1032
BsuRI GGCC 6 cut(s) 326, 341, 809, 932, 1045, 1119
BtgI CCRYGG 1 cut(s) 781
BtsCI GGATG 1 cut(s) 1084
BtsIMutI CAGTG 1 cut(s) 503
BtuMI TCGCGA 1 cut(s) 1145
Cac8I GCNNGC 3 cut(s) 268, 679, 788
CciI TCATGA 1 cut(s) 1298
CfoI GCGC 2 cut(s) 455, 1160
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 7 cut(s) 47, 807, 910, 1110, 1118, 1168, 1259
CseI GACGC 1 cut(s) 98
CsiI ACCWGGT 1 cut(s) 1170
Csp6I GTAC 3 cut(s) 10, 651, 1099
CspAI ACCGGT 1 cut(s) 179
CviAII CATG 5 cut(s) 37, 160, 697, 724, 1299
CviQI GTAC 3 cut(s) 10, 651, 1099
DdeI CTNAG 3 cut(s) 495, 645, 893
DpnI GATC 9 cut(s) 445, 692, 777, 903, 942, 977, 995, 1026, 1034
DpnII GATC 9 cut(s) 443, 690, 775, 901, 940, 975, 993, 1024, 1032
DraI TTTAAA 1 cut(s) 1276
DrdI GACNNNNNNGTC 1 cut(s) 317
DseDI GACNNNNNNGTC 1 cut(s) 317
EaeI YGGCCR 1 cut(s) 339
Eam1104I CTCTTC 2 cut(s) 116, 633
EarI CTCTTC 2 cut(s) 116, 633
Eco130I CCWWGG 3 cut(s) 627, 933, 1287
Eco147I AGGCCT 1 cut(s) 1045
Eco32I GATATC 1 cut(s) 1004
Eco47I GGWCC 5 cut(s) 47, 910, 1110, 1168, 1259
Eco57I CTGAAG 1 cut(s) 770
EcoO109I RGGNCCY 1 cut(s) 1168
EcoRII CCWGG 1 cut(s) 1170
EcoRV GATATC 1 cut(s) 1004
EcoT14I CCWWGG 3 cut(s) 627, 933, 1287
ErhI CCWWGG 3 cut(s) 627, 933, 1287
Esp3I CGTCTC 1 cut(s) 1118
FaeI CATG 5 cut(s) 40, 163, 700, 727, 1302
FaqI GGGAC 3 cut(s) 33, 896, 1272
FatI CATG 5 cut(s) 36, 159, 696, 723, 1298
FauI CCCGC 3 cut(s) 574, 592, 1153
Fnu4HI GCNGC 4 cut(s) 548, 624, 810, 846
FokI GGATG 1 cut(s) 1091
Fsp4HI GCNGC 4 cut(s) 548, 624, 810, 846
FspBI CTAG 2 cut(s) 533, 1020
GlaI GCGC 2 cut(s) 454, 1159
GluI GCNGC 4 cut(s) 548, 624, 810, 846
GsuI CTGGAG 1 cut(s) 846
HaeIII GGCC 6 cut(s) 326, 341, 809, 932, 1045, 1119
HapII CCGG 3 cut(s) 45, 180, 1121
HgaI GACGC 1 cut(s) 98
HhaI GCGC 2 cut(s) 455, 1160
Hin1I GRCGYC 1 cut(s) 90
Hin1II CATG 5 cut(s) 40, 163, 700, 727, 1302
Hin6I GCGC 2 cut(s) 453, 1158
HinP1I GCGC 2 cut(s) 453, 1158
HindIII AAGCTT 2 cut(s) 97, 675
HinfI GANTC 2 cut(s) 64, 617
HpaII CCGG 3 cut(s) 45, 180, 1121
HphI GGTGA 1 cut(s) 169
Hpy166II GTNNAC 1 cut(s) 18
Hpy188III TCNNGA 8 cut(s) 86, 123, 206, 533, 979, 1039, 1144, 1299
Hpy8I GTNNAC 1 cut(s) 18
HpyAV CCTTC 9 cut(s) 61, 174, 184, 222, 581, 922, 976, 1159, 1223
HpyCH4III ACNGT 2 cut(s) 22, 1141
HpyCH4IV ACGT 5 cut(s) 136, 528, 554, 1101, 1271
HpyCH4V TGCA 3 cut(s) 550, 845, 1058
HpyF10VI GCNNNNNNNGC 4 cut(s) 338, 520, 629, 1142
HpyF3I CTNAG 3 cut(s) 495, 645, 893
HpySE526I ACGT 5 cut(s) 136, 528, 554, 1101, 1271
Hsp92I GRCGYC 1 cut(s) 90
Hsp92II CATG 5 cut(s) 40, 163, 700, 727, 1302
HspAI GCGC 2 cut(s) 453, 1158
Kzo9I GATC 9 cut(s) 443, 690, 775, 901, 940, 975, 993, 1024, 1032
LmnI GCTCC 1 cut(s) 795
Lsp1109I GCAGC 3 cut(s) 534, 635, 857
LweI GCATC 2 cut(s) 811, 952
MabI ACCWGGT 1 cut(s) 1170
MaeI CTAG 2 cut(s) 533, 1020
MaeII ACGT 5 cut(s) 136, 528, 554, 1101, 1271
MaeIII GTNAC 4 cut(s) 137, 463, 835, 1267
MalI GATC 9 cut(s) 445, 692, 777, 903, 942, 977, 995, 1026, 1034
MboI GATC 9 cut(s) 443, 690, 775, 901, 940, 975, 993, 1024, 1032
MboII GAAGA 9 cut(s) 103, 238, 403, 548, 650, 685, 988, 1027, 1201
MflI RGATCY 5 cut(s) 443, 775, 940, 1024, 1032
MlsI TGGCCA 1 cut(s) 341
MluCI AATT 1 cut(s) 118
MluNI TGGCCA 1 cut(s) 341
MlyI GAGTC 1 cut(s) 626
MmeI TCCRAC 3 cut(s) 333, 831, 1137
Mox20I TGGCCA 1 cut(s) 341
MscI TGGCCA 1 cut(s) 341
MseI TTAA 3 cut(s) 428, 816, 1275
MslI CAYNNNNRTG 2 cut(s) 158, 276
Msp20I TGGCCA 1 cut(s) 341
MspA1I CMGCKG 1 cut(s) 812
MspI CCGG 3 cut(s) 45, 180, 1121
MspR9I CCNGG 3 cut(s) 45, 1121, 1172
MvaI CCWGG 1 cut(s) 1172
MvnI CGCG 2 cut(s) 1145, 1160
MwoI GCNNNNNNNGC 4 cut(s) 338, 520, 629, 1142
NciI CCSGG 2 cut(s) 45, 1121
NdeII GATC 9 cut(s) 443, 690, 775, 901, 940, 975, 993, 1024, 1032
NlaIII CATG 5 cut(s) 40, 163, 700, 727, 1302
NlaIV GGNNCC 6 cut(s) 49, 219, 445, 912, 1246, 1260
NmuCI GTSAC 2 cut(s) 463, 1267
NruI TCGCGA 1 cut(s) 1145
NspI RCATGY 2 cut(s) 40, 163
NspV TTCGAA 1 cut(s) 62
PagI TCATGA 1 cut(s) 1298
PceI AGGCCT 1 cut(s) 1045
PfeI GAWTC 1 cut(s) 64
PflFI GACNNNGTC 1 cut(s) 871
PinAI ACCGGT 1 cut(s) 179
PkrI GCNGC 4 cut(s) 549, 625, 811, 847
PleI GAGTC 1 cut(s) 625
PpsI GAGTC 1 cut(s) 625
Ppu21I YACGTR 1 cut(s) 1102
PpuMI RGGWCCY 1 cut(s) 1168
PsiI TTATAA 1 cut(s) 591
Psp1406I AACGTT 1 cut(s) 528
Psp5II RGGWCCY 1 cut(s) 1168
Psp6I CCWGG 1 cut(s) 1170
PspGI CCWGG 1 cut(s) 1170
PspN4I GGNNCC 6 cut(s) 49, 219, 445, 912, 1246, 1260
PspPI GGNCC 7 cut(s) 47, 807, 910, 1110, 1118, 1168, 1259
PspPPI RGGWCCY 1 cut(s) 1168
PsuI RGATCY 5 cut(s) 443, 775, 940, 1024, 1032
PsyI GACNNNGTC 1 cut(s) 871
RruI TCGCGA 1 cut(s) 1145
RsaI GTAC 3 cut(s) 11, 652, 1100
RsaNI GTAC 3 cut(s) 10, 651, 1099
RseI CAYNNNNRTG 2 cut(s) 158, 276
SaqAI TTAA 3 cut(s) 428, 816, 1275
SatI GCNGC 4 cut(s) 548, 624, 810, 846
Sau3AI GATC 9 cut(s) 443, 690, 775, 901, 940, 975, 993, 1024, 1032
Sau96I GGNCC 7 cut(s) 47, 807, 910, 1110, 1118, 1168, 1259
SchI GAGTC 1 cut(s) 626
ScrFI CCNGG 3 cut(s) 45, 1121, 1172
SexAI ACCWGGT 1 cut(s) 1170
SfaNI GCATC 2 cut(s) 811, 952
SfuI TTCGAA 1 cut(s) 62
SgrAI CRCCGGYG 1 cut(s) 179
SinI GGWCC 5 cut(s) 47, 910, 1110, 1168, 1259
SmiMI CAYNNNNRTG 2 cut(s) 158, 276
Sse9I AATT 1 cut(s) 118
SseBI AGGCCT 1 cut(s) 1045
SsiI CCGC 6 cut(s) 567, 585, 621, 810, 908, 1160
SspMI CTAG 2 cut(s) 533, 1020
StuI AGGCCT 1 cut(s) 1045
StyD4I CCNGG 3 cut(s) 43, 1119, 1170
StyI CCWWGG 3 cut(s) 627, 933, 1287
TaaI ACNGT 2 cut(s) 22, 1141
TaiI ACGT 5 cut(s) 139, 531, 557, 1104, 1274
TaqI TCGA 6 cut(s) 62, 114, 122, 207, 1038, 1203
TaqII GACCGA 1 cut(s) 404
TasI AATT 1 cut(s) 118
TatI WGTACW 1 cut(s) 9
TauI GCSGC 1 cut(s) 812
TfiI GAWTC 1 cut(s) 64
Tru1I TTAA 3 cut(s) 428, 816, 1275
Tru9I TTAA 3 cut(s) 428, 816, 1275
TscAI CASTG 1 cut(s) 510
TseFI GTSAC 2 cut(s) 463, 1267
TseI GCWGC 3 cut(s) 547, 623, 845
Tsp45I GTSAC 2 cut(s) 463, 1267
TspDTI ATGAA 7 cut(s) 43, 385, 685, 740, 900, 1199, 1284
TspGWI ACGGA 1 cut(s) 1142
TspRI CASTG 1 cut(s) 510
Tth111I GACNNNGTC 1 cut(s) 871
VpaK11BI GGWCC 5 cut(s) 47, 910, 1110, 1168, 1259
XbaI TCTAGA 1 cut(s) 532
XceI RCATGY 2 cut(s) 40, 163
XspI CTAG 2 cut(s) 533, 1020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.