Rh6BG107500

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
16716809 .. 16718065
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG107500.1

Sequence Viewer

Length: 1257 bp
ATGCCTCCCGGCTCCTTCATCGCTTCAAACCCTAAAGTCATCGCAGTCCTCGACGCGGTGAGCTTCCCTGTTCTCTTCGACACCTCCAAAGTCGAAAAACGTAACGTCTTGGACGGCACCTACATGCCCTCCACATCCTTCACCGGCGGCTATCGCGTCTGTGCCTATCTCGACCCCTCAGAACCGAACCACACTTCTCTCAAGCGCTTCTTCTTGTCACTACTCGCCAGTCGCCACCACAAGTTCATCCCACTCTTCCAAAACCACTTGTCAGACCTCTTTCTCAACCTGGAAACTGAAATTTCAAAAAATGGCAAAGCAGACTTCAACACCCCGAGCGACGACATGTCCTTTAAGTTCGTCTTCTCGCTGTTCTGCGGGTCAGAAAATACTTCATTGGGTTCCAAAGGGCCAAACTTGGTGGCCGCATGGGTCGCGCCACAACTGGCTCCGCAGATCACACTCGGGTCGCCCAAGTTGCTGAGCTTTGCTGAAGATTTGTTGCTGCACACTTTTTCCTACCCTGCATTTTTGGTCAAATCGACCTACAAGAAGCTCTACGATGCGTTTTACGAGTCGTCGGCTTCGGTTTTGGACGAGGCCGAGAATAGTTTCGGGATTCCGAGAGACGAAGCTTGCCACAACCTTTTGTTTTTGGCTTGCTTCAATGCTTTTGGTGGCATGAAGCTTTTGTTCCCTGCTTTAATCAAGTGGGTTGGATCCGCAGGAGAGGATTTGCACCGCCAGCTCCGAAATGAAATCAGGGCCTTTGTTAAGGAAAATGATGGGAATGTTACTTTCTCGGCGTTGGATAAGATGAATTTGACCAAGTCCGTGGTTTATGAGGCTTTGAGGATTGAACCTCCGGTTCCGTTCCAGTACGGGAAGGCCAAGGAGGATATCATGGTCCATAGCCATGACGCAGCATTTGAGATCAAAAAGGGGGAAATGATCTTCGGATATCAGCCGTTCGCCACAAAGGATCCGAAGATTTTCGAGAATCCGGAGGAGTTTGTGGGGCATAGGTTTGTAGGAGAAGGTGAGAAATTGTTGAAGTATGTTTATTGGTCAAATGGTCGCGAGACCGATGATCCGACGGTGGAGAATAAGCAGTGCGCGGGGAAGAATTTGGTGTTGCTTGTGTCGAGGTTAATGTTGGTAGAGTTTTTCCTTCGATATGACACTTTTACCGTTGATGTGACTACTGCTTCATTGGGTGCACCAGTGACGTTCAAAACATTGACCAAAGCCTCCTGA

Protein Analysis

418

Amino Acids

46.73

Weight (kDa)

6.09

Isoelectric Point (pI)

35.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 246 - 359 5.2e-16 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 116
AccII CGCG 5 cut(s) 56, 156, 437, 1080, 1118
AccIII TCCGGA 1 cut(s) 1003
AciI CCGC 8 cut(s) 56, 147, 378, 426, 452, 723, 742, 1118
AclWI GGATC 5 cut(s) 714, 727, 977, 990, 1085
AcoI YGGCCR 1 cut(s) 423
AcsI RAATTY 3 cut(s) 300, 820, 1126
AcuI CTGAAG 1 cut(s) 513
AfaI GTAC 1 cut(s) 881
AfeI AGCGCT 1 cut(s) 206
AfiI CCNNNNNNNGG 1 cut(s) 55
AflIII ACRYGT 1 cut(s) 345
AgsI TTSAA 7 cut(s) 27, 306, 328, 667, 860, 1054, 1234
AhdI GACNNNNNGTC 1 cut(s) 346
AjnI CCWGG 1 cut(s) 288
AluBI AGCT 6 cut(s) 63, 486, 556, 635, 688, 748
AluI AGCT 6 cut(s) 63, 486, 556, 635, 688, 748
Alw21I GWGCWC 1 cut(s) 1222
Alw26I GTCTC 2 cut(s) 621, 1076
Alw44I GTGCAC 1 cut(s) 1218
AlwI GGATC 5 cut(s) 714, 727, 977, 990, 1085
Ama87I CYCGRG 2 cut(s) 334, 464
Aor13HI TCCGGA 1 cut(s) 1003
Aor51HI AGCGCT 1 cut(s) 206
AoxI GGCC 5 cut(s) 410, 423, 600, 765, 888
ApaLI GTGCAC 1 cut(s) 1218
ApeKI GCWGC 2 cut(s) 505, 923
ApoI RAATTY 3 cut(s) 300, 820, 1126
ArsI GACNNNNNNTTYG 2 cut(s) 911, 943
Asp700I GAANNNNTTC 2 cut(s) 611, 992
AspLEI GCGC 3 cut(s) 207, 439, 1118
AspS9I GGNCC 3 cut(s) 410, 765, 907
AsuC2I CCSGG 1 cut(s) 9
AsuHPI GGTGA 3 cut(s) 70, 133, 1052
AvaI CYCGRG 2 cut(s) 334, 464
AvaII GGWCC 1 cut(s) 907
BaeGI GKGCMC 1 cut(s) 1222
BamHI GGATCC 2 cut(s) 719, 982
BanI GGYRCC 1 cut(s) 116
BbsI GAAGAC 1 cut(s) 355
Bbv12I GWGCWC 1 cut(s) 1222
BbvI GCAGC 2 cut(s) 492, 935
BccI CCATC 1 cut(s) 779
BceAI ACGGC 2 cut(s) 130, 952
BciT130I CCWGG 1 cut(s) 290
BcnI CCSGG 1 cut(s) 9
BcoDI GTCTC 2 cut(s) 621, 1076
BfoI RGCGCY 1 cut(s) 208
BisI GCNGC 4 cut(s) 148, 426, 506, 924
BlpI GCTNAGC 1 cut(s) 482
BlsI GCNGC 4 cut(s) 149, 427, 507, 925
Bme1390I CCNGG 2 cut(s) 9, 290
Bme18I GGWCC 1 cut(s) 907
BmeRI GACNNNNNGTC 1 cut(s) 346
BmeT110I CYCGRG 2 cut(s) 334, 464
BmgT120I GGNCC 3 cut(s) 410, 765, 907
BmiI GGNNCC 7 cut(s) 13, 118, 403, 450, 721, 870, 984
BmrFI CCNGG 2 cut(s) 9, 290
BmsI GCATC 1 cut(s) 553
BpiI GAAGAC 1 cut(s) 355
Bpu1102I GCTNAGC 1 cut(s) 482
BpuEI CTTGAG 1 cut(s) 185
BpuMI CCSGG 1 cut(s) 9
BsaI GGTCTC 1 cut(s) 1076
BsaJI CCNNGG 2 cut(s) 834, 891
BsaWI WCCGGW 2 cut(s) 865, 1003
BsaXI ACNNNNNCTCC 2 cut(s) 113, 143
Bsc4I CCNNNNNNNGG 1 cut(s) 55
Bse118I RCCGGY 1 cut(s) 143
Bse1I ACTGG 4 cut(s) 228, 450, 877, 1223
BseAI TCCGGA 1 cut(s) 1003
BseBI CCWGG 1 cut(s) 290
BseDI CCNNGG 2 cut(s) 834, 891
BseGI GGATG 2 cut(s) 134, 246
BseLI CCNNNNNNNGG 1 cut(s) 55
BseMII CTCAG 2 cut(s) 192, 473
BseNI ACTGG 4 cut(s) 228, 450, 877, 1223
BseRI GAGGAG 1 cut(s) 1022
BseSI GKGCMC 1 cut(s) 1222
BseXI GCAGC 2 cut(s) 492, 935
BsgI GTGCAG 1 cut(s) 491
Bsh1236I CGCG 5 cut(s) 56, 156, 437, 1080, 1118
BshFI GGCC 5 cut(s) 412, 425, 602, 767, 890
BshNI GGYRCC 1 cut(s) 116
BsiHKAI GWGCWC 1 cut(s) 1222
BsiHKCI CYCGRG 2 cut(s) 334, 464
BsiSI CCGG 4 cut(s) 9, 144, 866, 1004
BslI CCNNNNNNNGG 1 cut(s) 55
BsmAI GTCTC 2 cut(s) 621, 1076
BsmBI CGTCTC 1 cut(s) 621
BsnI GGCC 5 cut(s) 412, 425, 602, 767, 890
Bso31I GGTCTC 1 cut(s) 1076
BsoBI CYCGRG 2 cut(s) 334, 464
Bsp1286I GDGCHC 1 cut(s) 1222
Bsp13I TCCGGA 1 cut(s) 1003
Bsp143I GATC 6 cut(s) 456, 719, 933, 951, 982, 1090
Bsp1720I GCTNAGC 1 cut(s) 482
Bsp68I TCGCGA 1 cut(s) 1080
BspACI CCGC 8 cut(s) 56, 147, 378, 426, 452, 723, 742, 1118
BspANI GGCC 5 cut(s) 412, 425, 602, 767, 890
BspCNI CTCAG 2 cut(s) 191, 474
BspEI TCCGGA 1 cut(s) 1003
BspFNI CGCG 5 cut(s) 56, 156, 437, 1080, 1118
BspLI GGNNCC 7 cut(s) 13, 118, 403, 450, 721, 870, 984
BspPI GGATC 5 cut(s) 714, 727, 977, 990, 1085
BspT107I GGYRCC 1 cut(s) 116
BspTNI GGTCTC 1 cut(s) 1076
BsrFI RCCGGY 1 cut(s) 143
BsrI ACTGG 4 cut(s) 228, 450, 877, 1223
BssAI RCCGGY 1 cut(s) 143
BssECI CCNNGG 2 cut(s) 834, 891
BssMI GATC 6 cut(s) 456, 719, 933, 951, 982, 1090
BssT1I CCWWGG 1 cut(s) 891
Bst2UI CCWGG 1 cut(s) 290
Bst4CI ACNGT 2 cut(s) 1099, 1192
Bst6I CTCTTC 2 cut(s) 80, 260
BstC8I GCNNGC 3 cut(s) 637, 661, 746
BstDEI CTNAG 2 cut(s) 178, 482
BstDSI CCRYGG 1 cut(s) 834
BstF5I GGATG 2 cut(s) 134, 246
BstFNI CGCG 5 cut(s) 56, 156, 437, 1080, 1118
BstH2I RGCGCY 1 cut(s) 208
BstHHI GCGC 3 cut(s) 207, 439, 1118
BstKTI GATC 6 cut(s) 459, 722, 936, 954, 985, 1093
BstMAI GTCTC 2 cut(s) 621, 1076
BstMBI GATC 6 cut(s) 456, 719, 933, 951, 982, 1090
BstMWI GCNNNNNNNGC 4 cut(s) 153, 434, 478, 745
BstNI CCWGG 1 cut(s) 290
BstNSI RCATGY 2 cut(s) 127, 349
BstSCI CCNGG 2 cut(s) 7, 288
BstSLI GKGCMC 1 cut(s) 1222
BstUI CGCG 5 cut(s) 56, 156, 437, 1080, 1118
BstV1I GCAGC 2 cut(s) 492, 935
BstV2I GAAGAC 1 cut(s) 355
BstX2I RGATCY 2 cut(s) 719, 982
BstXI CCANNNNNNTGG 1 cut(s) 835
BstYI RGATCY 2 cut(s) 719, 982
BsuRI GGCC 5 cut(s) 412, 425, 602, 767, 890
BtgI CCRYGG 1 cut(s) 834
BtgZI GCGATG 2 cut(s) 4, 25
BtsCI GGATG 2 cut(s) 134, 246
BtsI GCAGTG 1 cut(s) 1118
BtsIMutI CAGTG 2 cut(s) 1118, 1230
BtuMI TCGCGA 1 cut(s) 1080
Cac8I GCNNGC 3 cut(s) 637, 661, 746
CfoI GCGC 3 cut(s) 207, 439, 1118
Cfr10I RCCGGY 1 cut(s) 143
Cfr13I GGNCC 3 cut(s) 410, 765, 907
CseI GACGC 3 cut(s) 62, 145, 929
Csp6I GTAC 1 cut(s) 880
CspCI CAANNNNNGTGG 2 cut(s) 402, 437
CviAII CATG 6 cut(s) 124, 346, 429, 682, 904, 917
CviQI GTAC 1 cut(s) 880
DdeI CTNAG 2 cut(s) 178, 482
DpnI GATC 6 cut(s) 458, 721, 935, 953, 984, 1092
DpnII GATC 6 cut(s) 456, 719, 933, 951, 982, 1090
DriI GACNNNNNGTC 1 cut(s) 346
EaeI YGGCCR 1 cut(s) 423
Eam1104I CTCTTC 2 cut(s) 80, 260
Eam1105I GACNNNNNGTC 1 cut(s) 346
EarI CTCTTC 2 cut(s) 80, 260
Eco130I CCWWGG 1 cut(s) 891
Eco31I GGTCTC 1 cut(s) 1076
Eco32I GATATC 2 cut(s) 901, 962
Eco47I GGWCC 1 cut(s) 907
Eco47III AGCGCT 1 cut(s) 206
Eco57I CTGAAG 1 cut(s) 513
Eco88I CYCGRG 2 cut(s) 334, 464
EcoO109I RGGNCCY 1 cut(s) 765
EcoRII CCWGG 1 cut(s) 288
EcoRV GATATC 2 cut(s) 901, 962
EcoT14I CCWWGG 1 cut(s) 891
ErhI CCWWGG 1 cut(s) 891
Esp3I CGTCTC 1 cut(s) 621
FaeI CATG 6 cut(s) 127, 349, 432, 685, 907, 920
FalI AAGNNNNNCTT 4 cut(s) 194, 226, 347, 379
FatI CATG 6 cut(s) 123, 345, 428, 681, 903, 916
FauI CCCGC 2 cut(s) 371, 1111
Fnu4HI GCNGC 4 cut(s) 148, 426, 506, 924
FokI GGATG 2 cut(s) 121, 233
Fsp4HI GCNGC 4 cut(s) 148, 426, 506, 924
GlaI GCGC 3 cut(s) 206, 438, 1117
GluI GCNGC 4 cut(s) 148, 426, 506, 924
HaeII RGCGCY 1 cut(s) 208
HaeIII GGCC 5 cut(s) 412, 425, 602, 767, 890
HapII CCGG 4 cut(s) 9, 144, 866, 1004
HgaI GACGC 3 cut(s) 62, 145, 929
HhaI GCGC 3 cut(s) 207, 439, 1118
Hin1II CATG 6 cut(s) 127, 349, 432, 685, 907, 920
Hin6I GCGC 3 cut(s) 205, 437, 1116
HinP1I GCGC 3 cut(s) 205, 437, 1116
HindIII AAGCTT 2 cut(s) 633, 686
HinfI GANTC 3 cut(s) 575, 619, 1000
HpaII CCGG 4 cut(s) 9, 144, 866, 1004
HphI GGTGA 3 cut(s) 70, 133, 1052
Hpy166II GTNNAC 1 cut(s) 1220
Hpy188I TCNGA 8 cut(s) 181, 274, 385, 624, 752, 959, 987, 1095
Hpy188III TCNNGA 6 cut(s) 170, 616, 997, 1004, 1079, 1254
Hpy8I GTNNAC 1 cut(s) 1220
Hpy99I CGWCG 4 cut(s) 56, 344, 583, 1099
HpyAV CCTTC 5 cut(s) 25, 148, 880, 1031, 1181
HpyCH4III ACNGT 2 cut(s) 1099, 1192
HpyCH4IV ACGT 3 cut(s) 100, 105, 1229
HpyCH4V TGCA 4 cut(s) 508, 527, 739, 1220
HpyF10VI GCNNNNNNNGC 4 cut(s) 153, 434, 478, 745
HpyF3I CTNAG 2 cut(s) 178, 482
HpySE526I ACGT 3 cut(s) 100, 105, 1229
Hsp92II CATG 6 cut(s) 127, 349, 432, 685, 907, 920
HspAI GCGC 3 cut(s) 205, 437, 1116
Kpn2I TCCGGA 1 cut(s) 1003
Kzo9I GATC 6 cut(s) 456, 719, 933, 951, 982, 1090
LmnI GCTCC 3 cut(s) 17, 454, 753
Lsp1109I GCAGC 2 cut(s) 492, 935
LweI GCATC 1 cut(s) 553
MaeII ACGT 3 cut(s) 100, 105, 1229
MaeIII GTNAC 5 cut(s) 101, 216, 793, 1198, 1225
MalI GATC 6 cut(s) 458, 721, 935, 953, 984, 1092
MboI GATC 6 cut(s) 456, 719, 933, 951, 982, 1090
MboII GAAGA 8 cut(s) 67, 202, 247, 355, 506, 946, 1000, 1135
MflI RGATCY 2 cut(s) 719, 982
MhlI GDGCHC 1 cut(s) 1222
MluCI AATT 4 cut(s) 300, 820, 1046, 1126
MlyI GAGTC 1 cut(s) 584
MmeI TCCRAC 3 cut(s) 697, 789, 1118
MroI TCCGGA 1 cut(s) 1003
MroXI GAANNNNTTC 2 cut(s) 611, 992
MseI TTAA 4 cut(s) 354, 704, 774, 1151
MslI CAYNNNNRTG 2 cut(s) 122, 915
MspI CCGG 4 cut(s) 9, 144, 866, 1004
MspR9I CCNGG 2 cut(s) 9, 290
MvaI CCWGG 1 cut(s) 290
MvnI CGCG 5 cut(s) 56, 156, 437, 1080, 1118
MwoI GCNNNNNNNGC 4 cut(s) 153, 434, 478, 745
NciI CCSGG 1 cut(s) 9
NdeII GATC 6 cut(s) 456, 719, 933, 951, 982, 1090
NlaIII CATG 6 cut(s) 127, 349, 432, 685, 907, 920
NlaIV GGNNCC 7 cut(s) 13, 118, 403, 450, 721, 870, 984
NmeAIII GCCGAG 2 cut(s) 628, 782
NmuCI GTSAC 3 cut(s) 216, 1198, 1225
NruI TCGCGA 1 cut(s) 1080
NspI RCATGY 2 cut(s) 127, 349
PciI ACATGT 1 cut(s) 345
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PdmI GAANNNNTTC 2 cut(s) 611, 992
PfeI GAWTC 2 cut(s) 619, 1000
PflFI GACNNNGTC 1 cut(s) 829
PkrI GCNGC 4 cut(s) 149, 427, 507, 925
PleI GAGTC 1 cut(s) 583
PpsI GAGTC 1 cut(s) 583
PscI ACATGT 1 cut(s) 345
Psp6I CCWGG 1 cut(s) 288
PspGI CCWGG 1 cut(s) 288
PspN4I GGNNCC 7 cut(s) 13, 118, 403, 450, 721, 870, 984
PspPI GGNCC 3 cut(s) 410, 765, 907
PsuI RGATCY 2 cut(s) 719, 982
PsyI GACNNNGTC 1 cut(s) 829
RruI TCGCGA 1 cut(s) 1080
RsaI GTAC 1 cut(s) 881
RsaNI GTAC 1 cut(s) 880
RseI CAYNNNNRTG 2 cut(s) 122, 915
SaqAI TTAA 4 cut(s) 354, 704, 774, 1151
SatI GCNGC 4 cut(s) 148, 426, 506, 924
Sau3AI GATC 6 cut(s) 456, 719, 933, 951, 982, 1090
Sau96I GGNCC 3 cut(s) 410, 765, 907
SchI GAGTC 1 cut(s) 584
ScrFI CCNGG 2 cut(s) 9, 290
SduI GDGCHC 1 cut(s) 1222
SfaNI GCATC 1 cut(s) 553
SgrAI CRCCGGYG 1 cut(s) 143
SinI GGWCC 1 cut(s) 907
SmiMI CAYNNNNRTG 2 cut(s) 122, 915
SmlI CTYRAG 1 cut(s) 200
SmoI CTYRAG 1 cut(s) 200
Sse9I AATT 4 cut(s) 300, 820, 1046, 1126
SsiI CCGC 8 cut(s) 56, 147, 378, 426, 452, 723, 742, 1118
StyD4I CCNGG 2 cut(s) 7, 288
StyI CCWWGG 1 cut(s) 891
TaaI ACNGT 2 cut(s) 1099, 1192
TaiI ACGT 3 cut(s) 103, 108, 1232
TaqI TCGA 8 cut(s) 51, 78, 93, 171, 542, 996, 1145, 1174
TaqII GACCGA 1 cut(s) 1100
TasI AATT 4 cut(s) 300, 820, 1046, 1126
TauI GCSGC 2 cut(s) 150, 428
TfiI GAWTC 2 cut(s) 619, 1000
Tru1I TTAA 4 cut(s) 354, 704, 774, 1151
Tru9I TTAA 4 cut(s) 354, 704, 774, 1151
TscAI CASTG 2 cut(s) 1118, 1230
TseFI GTSAC 3 cut(s) 216, 1198, 1225
TseI GCWGC 2 cut(s) 505, 923
Tsp45I GTSAC 3 cut(s) 216, 1198, 1225
TspDTI ATGAA 7 cut(s) 7, 235, 384, 698, 771, 833, 1200
TspGWI ACGGA 2 cut(s) 823, 861
TspRI CASTG 2 cut(s) 1118, 1230
Tth111I GACNNNGTC 1 cut(s) 829
VneI GTGCAC 1 cut(s) 1218
VpaK11BI GGWCC 1 cut(s) 907
XapI RAATTY 3 cut(s) 300, 820, 1126
XceI RCATGY 2 cut(s) 127, 349
XmnI GAANNNNTTC 2 cut(s) 611, 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.