Rmu_sc0005816.1_g000002

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005816.1
Physical Location & Seq
Forward (+)
9089 .. 10546
1458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005816.1_g000002.1.cds

Sequence Viewer

Length: 1458 bp
atgtcttcttcatcttcttctgctgttcccaaaccacaaccaaagcttccactgaaacaaatccctggtgactatggagcacccttctttggtgccatcaaggatcgctacgattttttctacaatcaaggtcgtgacgagttcttcaaagcccggatccaaacgtacaactccactgtgttccgtacaaacatgcctcctggtccattcattgcttcaaacccaaaggtcgtgacagtcctggatgccataagctttccgattctcttcgacaactccaaagtcgaaaaacgtgacatcttcgatggtacctacatgccatcaacagacttcaccggtggctatcgcatatgctcatttcttgatccatccgaagccaaacacacttctctaaaaaacttcttcttgtctctactctctgctaaccacgagaatgttataccacttttccatacccacttcaccaacctatttgtcaaagccgaggctcagttgttaaaagatggaaaatcagactttaacacactgaatgacaaaacttccttcgacttcatctttgagctgttttttgggaaaaacccatcggacacaactctggggtccaaaggatcaaccttggttaccctttggctcttaccccaactttctcctcagctcacgctagggttgcccaagttgttcaatgtttttgaagatttcttgcttcacacgtttcccttccctgccctttttgttaaaccggcttataacaaggtatacaaggccttttaccagtctgcagctaaggccttggacgaggccgagagtaatttcgggatttcaagagacgaagcatgccacaacctcgtgttcttggtgtgcttcaatgcttatggtggcatgaagcttttgttcccttccttgttgaaatgggtcggattagcaggagaggatttacacggcaagctccgtgatgaaatcagggcagttgttaaagaagctggaggtaagatcactcttgcagctttggataagatgacactaactaagtcagttgtttatgaggccttgaggattgatccttccgtcccattccaatacggaaaggccaaggaagatctaataatcgagagccatgacgcagcatttgagataaaaaagggagaaataatcttcgggtaccagaccattgcaactagggatggaaagattttcaagaaccccgaggagtttgtaggtgacaggtttgtgggggagggcgagaagctgctgaagtacgtgtggtggtccaacggccccgagacggtgagtccagccgccggggacaagcagtgcgccgggaaggatctcgtggtgctcatgaaccggataatgttagtcgagttcttccttcgttatgacacttttacgctcgacgtcggaacgtttttgttaggacgcaaagtgacgttcaagactttgaccccagcttcgtcctga

Protein Analysis

485

Amino Acids

54.34

Weight (kDa)

7.62

Isoelectric Point (pI)

31.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 747
AatII GACGTC 1 cut(s) 1398
Acc65I GGTACC 2 cut(s) 308, 1158
AccB1I GGYRCC 3 cut(s) 92, 308, 1158
AccI GTMKAC 1 cut(s) 756
AciI CCGC 1 cut(s) 1296
AclI AACGTT 1 cut(s) 1403
AclWI GGATC 7 cut(s) 111, 151, 164, 359, 616, 1052, 1332
AcuI CTGAAG 1 cut(s) 1271
AcyI GRCGYC 1 cut(s) 1395
AfaI GTAC 5 cut(s) 167, 187, 310, 1160, 1256
AfiI CCNNNNNNNGG 3 cut(s) 89, 1282, 1298
AflIII ACRYGT 2 cut(s) 708, 1257
AgeI ACCGGT 1 cut(s) 335
AgsI TTSAA 9 cut(s) 148, 219, 682, 692, 822, 865, 907, 1195, 1432
AhdI GACNNNNNGTC 1 cut(s) 1287
AjnI CCWGG 3 cut(s) 64, 199, 240
Alw21I GWGCWC 2 cut(s) 82, 1338
Alw26I GTCTC 3 cut(s) 414, 819, 1274
AlwI GGATC 7 cut(s) 111, 151, 164, 359, 616, 1052, 1332
Ama87I CYCGRG 2 cut(s) 1202, 1277
AoxI GGCC 6 cut(s) 762, 786, 798, 1044, 1086, 1273
ApeKI GCWGC 4 cut(s) 779, 1001, 1121, 1246
ArsI GACNNNNNNTTYG 5 cut(s) 539, 571, 1109, 1141, 1432
AsiGI ACCGGT 1 cut(s) 335
Asp718I GGTACC 2 cut(s) 308, 1158
AspLEI GCGC 1 cut(s) 1316
AspS9I GGNCC 4 cut(s) 203, 600, 1266, 1274
AsuC2I CCSGG 3 cut(s) 154, 1300, 1318
AsuHPI GGTGA 5 cut(s) 80, 325, 454, 1229, 1297
AvaI CYCGRG 2 cut(s) 1202, 1277
AvaII GGWCC 3 cut(s) 203, 600, 1266
BamHI GGATCC 1 cut(s) 156
BanI GGYRCC 3 cut(s) 92, 308, 1158
BauI CACGAG 3 cut(s) 428, 845, 1328
Bbv12I GWGCWC 2 cut(s) 82, 1338
BbvCI CCTCAGC 1 cut(s) 651
BbvI GCAGC 4 cut(s) 791, 1013, 1133, 1233
BccI CCATC 7 cut(s) 104, 299, 328, 376, 497, 589, 1175
BceAI ACGGC 2 cut(s) 955, 1288
BciT130I CCWGG 3 cut(s) 66, 201, 242
BcnI CCSGG 3 cut(s) 154, 1300, 1318
BcoDI GTCTC 3 cut(s) 414, 819, 1274
BfaI CTAG 2 cut(s) 662, 1176
BfmI CTRYAG 1 cut(s) 777
BglII AGATCT 1 cut(s) 1096
BisI GCNGC 5 cut(s) 780, 1002, 1122, 1247, 1296
BlsI GCNGC 5 cut(s) 781, 1003, 1123, 1248, 1297
Bme1390I CCNGG 6 cut(s) 66, 154, 201, 242, 1300, 1318
Bme18I GGWCC 3 cut(s) 203, 600, 1266
BmeRI GACNNNNNGTC 1 cut(s) 1287
BmeT110I CYCGRG 2 cut(s) 1202, 1277
BmgT120I GGNCC 4 cut(s) 203, 600, 1266, 1274
BmiI GGNNCC 6 cut(s) 94, 158, 310, 601, 1160, 1276
BmrFI CCNGG 6 cut(s) 66, 154, 201, 242, 1300, 1318
BmsI GCATC 1 cut(s) 235
BpmI CTGGAG 1 cut(s) 1002
Bpu10I CCTNAGC 2 cut(s) 651, 783
BpuEI CTTGAG 1 cut(s) 1069
BpuMI CCSGG 3 cut(s) 154, 1300, 1318
BsaAI YACGTR 1 cut(s) 1258
BsaHI GRCGYC 1 cut(s) 1395
BsaJI CCNNGG 7 cut(s) 64, 483, 615, 789, 1089, 1203, 1299
BsaWI WCCGGW 2 cut(s) 335, 1344
Bsc4I CCNNNNNNNGG 3 cut(s) 89, 1282, 1298
Bse118I RCCGGY 2 cut(s) 335, 739
Bse1I ACTGG 1 cut(s) 772
Bse3DI GCAATG 2 cut(s) 210, 1167
BseBI CCWGG 3 cut(s) 66, 201, 242
BseDI CCNNGG 7 cut(s) 64, 483, 615, 789, 1089, 1203, 1299
BseGI GGATG 3 cut(s) 250, 368, 1186
BseLI CCNNNNNNNGG 3 cut(s) 89, 1282, 1298
BseMI GCAATG 2 cut(s) 210, 1167
BseMII CTCAG 2 cut(s) 503, 665
BseNI ACTGG 1 cut(s) 772
BseRI GAGGAG 2 cut(s) 639, 1220
BseXI GCAGC 4 cut(s) 791, 1013, 1133, 1233
BseYI CCCAGC 1 cut(s) 1444
BshFI GGCC 6 cut(s) 764, 788, 800, 1046, 1088, 1275
BshNI GGYRCC 3 cut(s) 92, 308, 1158
BshTI ACCGGT 1 cut(s) 335
BsiHKAI GWGCWC 2 cut(s) 82, 1338
BsiHKCI CYCGRG 2 cut(s) 1202, 1277
BsiSI CCGG 6 cut(s) 154, 336, 740, 1299, 1317, 1345
BslFI GGGAC 2 cut(s) 1052, 1316
BslI CCNNNNNNNGG 3 cut(s) 89, 1282, 1298
BsmAI GTCTC 3 cut(s) 414, 819, 1274
BsmBI CGTCTC 2 cut(s) 819, 1274
BsmFI GGGAC 2 cut(s) 1052, 1316
BsnI GGCC 6 cut(s) 764, 788, 800, 1046, 1088, 1275
BsoBI CYCGRG 2 cut(s) 1202, 1277
Bsp1286I GDGCHC 2 cut(s) 82, 1338
Bsp143I GATC 8 cut(s) 103, 156, 364, 608, 990, 1057, 1096, 1324
BspACI CCGC 1 cut(s) 1296
BspANI GGCC 6 cut(s) 764, 788, 800, 1046, 1088, 1275
BspCNI CTCAG 2 cut(s) 502, 664
BspHI TCATGA 1 cut(s) 1338
BspLI GGNNCC 6 cut(s) 94, 158, 310, 601, 1160, 1276
BspMAI CTGCAG 1 cut(s) 781
BspPI GGATC 7 cut(s) 111, 151, 164, 359, 616, 1052, 1332
BspT107I GGYRCC 3 cut(s) 92, 308, 1158
BsrDI GCAATG 2 cut(s) 210, 1167
BsrFI RCCGGY 2 cut(s) 335, 739
BsrI ACTGG 1 cut(s) 772
BssAI RCCGGY 2 cut(s) 335, 739
BssECI CCNNGG 7 cut(s) 64, 483, 615, 789, 1089, 1203, 1299
BssMI GATC 8 cut(s) 103, 156, 364, 608, 990, 1057, 1096, 1324
BssNAI GTATAC 1 cut(s) 757
BssNI GRCGYC 1 cut(s) 1395
BssSI CACGAG 3 cut(s) 428, 845, 1328
BssT1I CCWWGG 3 cut(s) 615, 789, 1089
Bst1107I GTATAC 1 cut(s) 757
Bst2BI CACGAG 3 cut(s) 428, 845, 1328
Bst2UI CCWGG 3 cut(s) 66, 201, 242
Bst4CI ACNGT 3 cut(s) 178, 238, 1285
Bst6I CTCTTC 1 cut(s) 272
BstACI GRCGYC 1 cut(s) 1395
BstBAI YACGTR 1 cut(s) 1258
BstC8I GCNNGC 2 cut(s) 835, 944
BstDEI CTNAG 4 cut(s) 489, 651, 783, 1026
BstEII GGTNACC 1 cut(s) 619
BstF5I GGATG 3 cut(s) 250, 368, 1186
BstHHI GCGC 1 cut(s) 1316
BstKTI GATC 8 cut(s) 106, 159, 367, 611, 993, 1060, 1099, 1327
BstMAI GTCTC 3 cut(s) 414, 819, 1274
BstMBI GATC 8 cut(s) 103, 156, 364, 608, 990, 1057, 1096, 1324
BstMWI GCNNNNNNNGC 2 cut(s) 667, 785
BstNI CCWGG 3 cut(s) 66, 201, 242
BstNSI RCATGY 3 cut(s) 196, 319, 837
BstPI GGTNACC 1 cut(s) 619
BstSCI CCNGG 6 cut(s) 64, 152, 199, 240, 1298, 1316
BstSFI CTRYAG 1 cut(s) 777
BstV1I GCAGC 4 cut(s) 791, 1013, 1133, 1233
BstX2I RGATCY 3 cut(s) 156, 1096, 1324
BstYI RGATCY 3 cut(s) 156, 1096, 1324
BstZ17I GTATAC 1 cut(s) 757
BsuRI GGCC 6 cut(s) 764, 788, 800, 1046, 1088, 1275
BtsCI GGATG 3 cut(s) 250, 368, 1186
BtsI GCAGTG 1 cut(s) 1316
BtsIMutI CAGTG 4 cut(s) 50, 174, 524, 1316
Cac8I GCNNGC 2 cut(s) 835, 944
CciI TCATGA 1 cut(s) 1338
CfoI GCGC 1 cut(s) 1316
Cfr10I RCCGGY 2 cut(s) 335, 739
Cfr13I GGNCC 4 cut(s) 203, 600, 1266, 1274
CseI GACGC 2 cut(s) 1127, 1425
Csp6I GTAC 5 cut(s) 166, 186, 309, 1159, 1255
CspAI ACCGGT 1 cut(s) 335
CviAII CATG 6 cut(s) 193, 316, 834, 880, 1115, 1339
CviQI GTAC 5 cut(s) 166, 186, 309, 1159, 1255
DdeI CTNAG 4 cut(s) 489, 651, 783, 1026
DpnI GATC 8 cut(s) 105, 158, 366, 610, 992, 1059, 1098, 1326
DpnII GATC 8 cut(s) 103, 156, 364, 608, 990, 1057, 1096, 1324
DriI GACNNNNNGTC 1 cut(s) 1287
Eam1104I CTCTTC 1 cut(s) 272
Eam1105I GACNNNNNGTC 1 cut(s) 1287
EarI CTCTTC 1 cut(s) 272
Eco130I CCWWGG 3 cut(s) 615, 789, 1089
Eco147I AGGCCT 3 cut(s) 764, 788, 1046
Eco47I GGWCC 3 cut(s) 203, 600, 1266
Eco57I CTGAAG 1 cut(s) 1271
Eco88I CYCGRG 2 cut(s) 1202, 1277
Eco91I GGTNACC 1 cut(s) 619
EcoO65I GGTNACC 1 cut(s) 619
EcoRII CCWGG 3 cut(s) 64, 199, 240
EcoT14I CCWWGG 3 cut(s) 615, 789, 1089
ErhI CCWWGG 3 cut(s) 615, 789, 1089
Esp3I CGTCTC 2 cut(s) 819, 1274
FaeI CATG 6 cut(s) 196, 319, 837, 883, 1118, 1342
FaqI GGGAC 2 cut(s) 1052, 1316
FatI CATG 6 cut(s) 192, 315, 833, 879, 1114, 1338
FauNDI CATATG 1 cut(s) 350
FblI GTMKAC 1 cut(s) 756
Fnu4HI GCNGC 5 cut(s) 780, 1002, 1122, 1247, 1296
FokI GGATG 3 cut(s) 257, 355, 1193
Fsp4HI GCNGC 5 cut(s) 780, 1002, 1122, 1247, 1296
FspBI CTAG 2 cut(s) 662, 1176
GlaI GCGC 1 cut(s) 1315
GluI GCNGC 5 cut(s) 780, 1002, 1122, 1247, 1296
GsaI CCCAGC 1 cut(s) 1448
GsuI CTGGAG 1 cut(s) 1002
HaeIII GGCC 6 cut(s) 764, 788, 800, 1046, 1088, 1275
HapII CCGG 6 cut(s) 154, 336, 740, 1299, 1317, 1345
HgaI GACGC 2 cut(s) 1127, 1425
HhaI GCGC 1 cut(s) 1316
Hin1I GRCGYC 1 cut(s) 1395
Hin1II CATG 6 cut(s) 196, 319, 837, 883, 1118, 1342
Hin6I GCGC 1 cut(s) 1314
HinP1I GCGC 1 cut(s) 1314
HindIII AAGCTT 3 cut(s) 44, 253, 884
HinfI GANTC 2 cut(s) 262, 1288
HpaII CCGG 6 cut(s) 154, 336, 740, 1299, 1317, 1345
HphI GGTGA 5 cut(s) 80, 325, 454, 1229, 1297
Hpy166II GTNNAC 1 cut(s) 757
Hpy188I TCNGA 6 cut(s) 261, 373, 514, 586, 917, 1400
Hpy8I GTNNAC 1 cut(s) 757
Hpy99I CGWCG 2 cut(s) 1397, 1400
HpyAV CCTTC 7 cut(s) 94, 553, 727, 906, 1071, 1315, 1379
HpyCH4III ACNGT 3 cut(s) 178, 238, 1285
HpyCH4IV ACGT 7 cut(s) 164, 292, 710, 1257, 1395, 1403, 1427
HpyCH4V TGCA 3 cut(s) 779, 1001, 1172
HpyF10VI GCNNNNNNNGC 2 cut(s) 667, 785
HpyF3I CTNAG 4 cut(s) 489, 651, 783, 1026
HpySE526I ACGT 7 cut(s) 164, 292, 710, 1257, 1395, 1403, 1427
Hsp92I GRCGYC 1 cut(s) 1395
Hsp92II CATG 6 cut(s) 196, 319, 837, 883, 1118, 1342
HspAI GCGC 1 cut(s) 1314
KpnI GGTACC 2 cut(s) 312, 1162
Kzo9I GATC 8 cut(s) 103, 156, 364, 608, 990, 1057, 1096, 1324
LmnI GCTCC 2 cut(s) 77, 951
Lsp1109I GCAGC 4 cut(s) 791, 1013, 1133, 1233
LweI GCATC 1 cut(s) 235
MaeI CTAG 2 cut(s) 662, 1176
MaeII ACGT 7 cut(s) 164, 292, 710, 1257, 1395, 1403, 1427
MaeIII GTNAC 7 cut(s) 68, 134, 232, 293, 619, 1217, 1423
MalI GATC 8 cut(s) 105, 158, 366, 610, 992, 1059, 1098, 1326
MboI GATC 8 cut(s) 103, 156, 364, 608, 990, 1057, 1096, 1324
MflI RGATCY 3 cut(s) 156, 1096, 1324
MhlI GDGCHC 2 cut(s) 82, 1338
MluCI AATT 1 cut(s) 808
MlyI GAGTC 1 cut(s) 1297
MmeI TCCRAC 3 cut(s) 895, 1293, 1378
MseI TTAA 4 cut(s) 497, 519, 735, 972
MslI CAYNNNNRTG 1 cut(s) 432
MspI CCGG 6 cut(s) 154, 336, 740, 1299, 1317, 1345
MspR9I CCNGG 6 cut(s) 66, 154, 201, 242, 1300, 1318
MvaI CCWGG 3 cut(s) 66, 201, 242
MwoI GCNNNNNNNGC 2 cut(s) 667, 785
NciI CCSGG 3 cut(s) 154, 1300, 1318
NdeI CATATG 1 cut(s) 350
NdeII GATC 8 cut(s) 103, 156, 364, 608, 990, 1057, 1096, 1324
NlaIII CATG 6 cut(s) 196, 319, 837, 883, 1118, 1342
NlaIV GGNNCC 6 cut(s) 94, 158, 310, 601, 1160, 1276
NmeAIII GCCGAG 2 cut(s) 508, 826
NmuCI GTSAC 6 cut(s) 68, 134, 232, 293, 1217, 1423
NspI RCATGY 3 cut(s) 196, 319, 837
PaeI GCATGC 1 cut(s) 837
PagI TCATGA 1 cut(s) 1338
PceI AGGCCT 3 cut(s) 764, 788, 1046
PfeI GAWTC 1 cut(s) 262
PfoI TCCNGGA 1 cut(s) 240
PinAI ACCGGT 1 cut(s) 335
PkrI GCNGC 5 cut(s) 781, 1003, 1123, 1248, 1297
PleI GAGTC 1 cut(s) 1296
PpsI GAGTC 1 cut(s) 1296
Ppu21I YACGTR 1 cut(s) 1258
PsiI TTATAA 1 cut(s) 747
Psp1406I AACGTT 1 cut(s) 1403
Psp6I CCWGG 3 cut(s) 64, 199, 240
PspEI GGTNACC 1 cut(s) 619
PspFI CCCAGC 1 cut(s) 1444
PspGI CCWGG 3 cut(s) 64, 199, 240
PspN4I GGNNCC 6 cut(s) 94, 158, 310, 601, 1160, 1276
PspPI GGNCC 4 cut(s) 203, 600, 1266, 1274
PstI CTGCAG 1 cut(s) 781
PsuI RGATCY 3 cut(s) 156, 1096, 1324
RsaI GTAC 5 cut(s) 167, 187, 310, 1160, 1256
RsaNI GTAC 5 cut(s) 166, 186, 309, 1159, 1255
RseI CAYNNNNRTG 1 cut(s) 432
SaqAI TTAA 4 cut(s) 497, 519, 735, 972
SatI GCNGC 5 cut(s) 780, 1002, 1122, 1247, 1296
Sau3AI GATC 8 cut(s) 103, 156, 364, 608, 990, 1057, 1096, 1324
Sau96I GGNCC 4 cut(s) 203, 600, 1266, 1274
SchI GAGTC 1 cut(s) 1297
ScrFI CCNGG 6 cut(s) 66, 154, 201, 242, 1300, 1318
SduI GDGCHC 2 cut(s) 82, 1338
SfaNI GCATC 1 cut(s) 235
SfcI CTRYAG 1 cut(s) 777
SgrAI CRCCGGYG 1 cut(s) 335
SinI GGWCC 3 cut(s) 203, 600, 1266
SmiMI CAYNNNNRTG 1 cut(s) 432
SmlI CTYRAG 1 cut(s) 1048
SmoI CTYRAG 1 cut(s) 1048
SphI GCATGC 1 cut(s) 837
Sse9I AATT 1 cut(s) 808
SseBI AGGCCT 3 cut(s) 764, 788, 1046
SsiI CCGC 1 cut(s) 1296
SspMI CTAG 2 cut(s) 662, 1176
StuI AGGCCT 3 cut(s) 764, 788, 1046
StyD4I CCNGG 6 cut(s) 64, 152, 199, 240, 1298, 1316
StyI CCWWGG 3 cut(s) 615, 789, 1089
TaaI ACNGT 3 cut(s) 178, 238, 1285
TaiI ACGT 7 cut(s) 167, 295, 713, 1260, 1398, 1406, 1430
TaqI TCGA 7 cut(s) 270, 285, 303, 546, 1107, 1359, 1392
TasI AATT 1 cut(s) 808
TauI GCSGC 1 cut(s) 1298
TfiI GAWTC 1 cut(s) 262
Tru1I TTAA 4 cut(s) 497, 519, 735, 972
Tru9I TTAA 4 cut(s) 497, 519, 735, 972
TscAI CASTG 4 cut(s) 57, 181, 531, 1316
TseFI GTSAC 6 cut(s) 68, 134, 232, 293, 1217, 1423
TseI GCWGC 4 cut(s) 779, 1001, 1121, 1246
Tsp45I GTSAC 6 cut(s) 68, 134, 232, 293, 1217, 1423
TspDTI ATGAA 5 cut(s) 199, 541, 896, 969, 1355
TspGWI ACGGA 4 cut(s) 173, 938, 1054, 1095
TspRI CASTG 4 cut(s) 57, 181, 531, 1316
VpaK11BI GGWCC 3 cut(s) 203, 600, 1266
XceI RCATGY 3 cut(s) 196, 319, 837
XmiI GTMKAC 1 cut(s) 756
XspI CTAG 2 cut(s) 662, 1176
ZraI GACGTC 1 cut(s) 1396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.