Rroxscaffold_7G00207620

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
57530943 .. 57532402
1460 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_7G00207620.1

Sequence Viewer

Length: 1386 bp
ATGTCTTCACCTTCATCTTCTAACCCATCTGACTCATCATCATCTGCACGACCAAAGCTTCCACTGAAACCAATCCCAGGCGACTATGGCTTACCCTTCTTCGGTCCCATCAAAGATCGCTACAACTATTTCTACAACCAAGGAAAAGATGCGTTCTTCAAAACCCGAATCCAAAAATACAACTCCACAGTCTTCCGTACCAACATGCCCCCCGGCTCCTTCATCGCCTCAAACCCTAAAGTCATCGCAGTCCTCGACGCCGTGAGCTTCCCCGTTCTCTTCGACACCTCCAAAGTCGAAAAACGTAACGTCTTGGACGGCACCTACATGCCCTCCACATCCTTCACTGGCGGCTATCGCGTCTGTGCCTATCTTGACCCCTCAGAACCGAACCACGCTTCTCTCAAGCGCTTCTTTTTGTCTCTACTCGCCAGTCGCCACCACAAGTTCATCCCACTCTTTCAAAACCACTTGTCCAACCTCTTTCTCAACCTGGAAACTGAAATTTCAAAAAATGGCAAAGCAGACTTCAACACCCCGAGCGACGACATGTCCTTTAAGTTCATCTTCTCGCTGTTCTGCGGGTCAGAAAATACTTCACTGGGTTCCAAAGGGCCAAACTTGGTGGCCGTATGGCTCGCGCCACAACTGGCTCCGCAGATCACACTCGGGTCGCCCAAGTTGCTGAGCTTTGCTGAAGATTTGTTGCTGCACACCTTTTCCTACCCTGCATTTTTGGTCAAATCGACCTACAAGAAGCTCTACGATGCTTTTTACGAGTCGTCGGCTTCGGTTTTGGACGAGGCGGAGAATAGTTTCGGGATTCCGAGAGACGAAGCTTGCCACAACCTGTTGTTTTTGGCTTGCTTCAATGCTTTTGGAGGCATGAAGCTTTTGTTCCCTGCTTTAATCAAGTGGGTTGGATCCGCAGGAGAGGATTTGCACCGCCAGCTCCGAAATGAAATCAGGGCGGTTGTTAAGGAAAATGATGGGAATGTTACTTTCTCGGCGTTGGATAAGATGACTTTGACCAAGTCCGTGGTTTATGAGGCTTTGAGGATTGAACCTCCGGTTCCGTTCCAGTACGGGAAGGCCAAGGAGGATATCGTGGATCCGAAGATCTTTGAGAATCCGGAGGACTTTGTGGGGCATAGGTTTGTAGGAGAAGGTGAGAAACTGTTGAAGTATGTTTATTGGTCGAATGGTCGTGAGATTGATGATCCCACGGTGGAGAATAAGCAGTGTGCCGGGAAGGATTTGGTGTTGCTTGTGTGCAGGTTAATGTTGGTAGAGTTTTTCCTTCGGTATGACACTTGTACTGTTGATGTGACTACGGTTTCATTGGGTGCATCAGTGACGTTCAAAACATTGACCAAAGCCTCCTAA

Protein Analysis

461

Amino Acids

51.51

Weight (kDa)

7.57

Isoelectric Point (pI)

37.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 314 - 369 2.4e-07 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1266
AccB1I GGYRCC 1 cut(s) 320
AccII CGCG 2 cut(s) 360, 641
AccIII TCCGGA 1 cut(s) 1132
AciI CCGC 7 cut(s) 351, 582, 656, 806, 927, 946, 971
AclWI GGATC 5 cut(s) 918, 931, 1106, 1119, 1214
AcoI YGGCCR 1 cut(s) 627
AcsI RAATTY 1 cut(s) 504
AcuI CTGAAG 1 cut(s) 717
AcyI GRCGYC 1 cut(s) 258
AfaI GTAC 3 cut(s) 199, 1085, 1318
AfeI AGCGCT 1 cut(s) 410
AfiI CCNNNNNNNGG 2 cut(s) 77, 101
AflIII ACRYGT 1 cut(s) 549
AgsI TTSAA 8 cut(s) 160, 464, 510, 532, 871, 1064, 1183, 1363
AhdI GACNNNNNGTC 1 cut(s) 550
AjnI CCWGG 2 cut(s) 76, 492
AluBI AGCT 7 cut(s) 58, 267, 690, 760, 839, 892, 952
AluI AGCT 7 cut(s) 58, 267, 690, 760, 839, 892, 952
Alw26I GTCTC 2 cut(s) 426, 825
AlwI GGATC 5 cut(s) 918, 931, 1106, 1119, 1214
Ama87I CYCGRG 2 cut(s) 538, 668
Aor13HI TCCGGA 1 cut(s) 1132
Aor51HI AGCGCT 1 cut(s) 410
AoxI GGCC 3 cut(s) 614, 627, 1092
ApeKI GCWGC 1 cut(s) 709
ApoI RAATTY 1 cut(s) 504
Asp700I GAANNNNTTC 1 cut(s) 815
AspLEI GCGC 2 cut(s) 411, 643
AspS9I GGNCC 2 cut(s) 104, 614
AsuC2I CCSGG 2 cut(s) 213, 1249
AsuHPI GGTGA 1 cut(s) 1181
AvaI CYCGRG 2 cut(s) 538, 668
AvaII GGWCC 1 cut(s) 104
BamHI GGATCC 2 cut(s) 923, 1111
BanI GGYRCC 1 cut(s) 320
BbsI GAAGAC 1 cut(s) 184
BbvI GCAGC 1 cut(s) 696
BccI CCATC 3 cut(s) 34, 116, 983
BceAI ACGGC 3 cut(s) 245, 334, 614
BciT130I CCWGG 2 cut(s) 78, 494
BcnI CCSGG 2 cut(s) 213, 1249
BcoDI GTCTC 2 cut(s) 426, 825
BfoI RGCGCY 1 cut(s) 412
BfuAI ACCTGC 1 cut(s) 1266
BglII AGATCT 1 cut(s) 1119
BisI GCNGC 2 cut(s) 352, 710
BlpI GCTNAGC 1 cut(s) 686
BlsI GCNGC 2 cut(s) 353, 711
Bme1390I CCNGG 4 cut(s) 78, 213, 494, 1249
Bme18I GGWCC 1 cut(s) 104
BmeRI GACNNNNNGTC 1 cut(s) 550
BmeT110I CYCGRG 2 cut(s) 538, 668
BmgT120I GGNCC 2 cut(s) 104, 614
BmiI GGNNCC 8 cut(s) 106, 217, 322, 607, 654, 925, 1074, 1113
BmrFI CCNGG 4 cut(s) 78, 213, 494, 1249
BmrI ACTGGG 1 cut(s) 611
BmsI GCATC 3 cut(s) 139, 757, 1358
BmuI ACTGGG 1 cut(s) 611
BpiI GAAGAC 1 cut(s) 184
Bpu1102I GCTNAGC 1 cut(s) 686
BpuEI CTTGAG 1 cut(s) 389
BpuMI CCSGG 2 cut(s) 213, 1249
BsaHI GRCGYC 1 cut(s) 258
BsaJI CCNNGG 6 cut(s) 76, 139, 211, 1038, 1095, 1224
BsaWI WCCGGW 2 cut(s) 1069, 1132
BsaXI ACNNNNNCTCC 2 cut(s) 317, 347
Bsc4I CCNNNNNNNGG 2 cut(s) 77, 101
Bse1I ACTGG 5 cut(s) 352, 432, 606, 654, 1081
BseAI TCCGGA 1 cut(s) 1132
BseBI CCWGG 2 cut(s) 78, 494
BseDI CCNNGG 6 cut(s) 76, 139, 211, 1038, 1095, 1224
BseGI GGATG 2 cut(s) 338, 450
BseLI CCNNNNNNNGG 2 cut(s) 77, 101
BseMII CTCAG 2 cut(s) 396, 677
BseNI ACTGG 5 cut(s) 352, 432, 606, 654, 1081
BseXI GCAGC 1 cut(s) 696
BsgI GTGCAG 3 cut(s) 30, 695, 1294
Bsh1236I CGCG 2 cut(s) 360, 641
BshFI GGCC 3 cut(s) 616, 629, 1094
BshNI GGYRCC 1 cut(s) 320
BsiHKCI CYCGRG 2 cut(s) 538, 668
BsiSI CCGG 4 cut(s) 213, 1070, 1133, 1248
BslFI GGGAC 1 cut(s) 90
BslI CCNNNNNNNGG 2 cut(s) 77, 101
BsmAI GTCTC 2 cut(s) 426, 825
BsmBI CGTCTC 1 cut(s) 825
BsmFI GGGAC 1 cut(s) 90
BsnI GGCC 3 cut(s) 616, 629, 1094
BsoBI CYCGRG 2 cut(s) 538, 668
Bsp13I TCCGGA 1 cut(s) 1132
Bsp143I GATC 6 cut(s) 115, 660, 923, 1111, 1119, 1219
Bsp1720I GCTNAGC 1 cut(s) 686
BspACI CCGC 7 cut(s) 351, 582, 656, 806, 927, 946, 971
BspANI GGCC 3 cut(s) 616, 629, 1094
BspCNI CTCAG 2 cut(s) 395, 678
BspEI TCCGGA 1 cut(s) 1132
BspFNI CGCG 2 cut(s) 360, 641
BspLI GGNNCC 8 cut(s) 106, 217, 322, 607, 654, 925, 1074, 1113
BspMI ACCTGC 1 cut(s) 1266
BspPI GGATC 5 cut(s) 918, 931, 1106, 1119, 1214
BspT107I GGYRCC 1 cut(s) 320
BsrI ACTGG 5 cut(s) 352, 432, 606, 654, 1081
BssECI CCNNGG 6 cut(s) 76, 139, 211, 1038, 1095, 1224
BssMI GATC 6 cut(s) 115, 660, 923, 1111, 1119, 1219
BssNI GRCGYC 1 cut(s) 258
BssT1I CCWWGG 2 cut(s) 139, 1095
Bst2UI CCWGG 2 cut(s) 78, 494
Bst4CI ACNGT 5 cut(s) 190, 1179, 1228, 1321, 1336
Bst6I CTCTTC 1 cut(s) 284
BstACI GRCGYC 1 cut(s) 258
BstC8I GCNNGC 4 cut(s) 639, 841, 865, 950
BstDEI CTNAG 2 cut(s) 382, 686
BstDSI CCRYGG 2 cut(s) 1038, 1224
BstF5I GGATG 2 cut(s) 338, 450
BstFNI CGCG 2 cut(s) 360, 641
BstH2I RGCGCY 1 cut(s) 412
BstHHI GCGC 2 cut(s) 411, 643
BstKTI GATC 6 cut(s) 118, 663, 926, 1114, 1122, 1222
BstMAI GTCTC 2 cut(s) 426, 825
BstMBI GATC 6 cut(s) 115, 660, 923, 1111, 1119, 1219
BstMWI GCNNNNNNNGC 4 cut(s) 87, 357, 682, 949
BstNI CCWGG 2 cut(s) 78, 494
BstNSI RCATGY 3 cut(s) 208, 331, 553
BstSCI CCNGG 4 cut(s) 76, 211, 492, 1247
BstUI CGCG 2 cut(s) 360, 641
BstV1I GCAGC 1 cut(s) 696
BstV2I GAAGAC 1 cut(s) 184
BstX2I RGATCY 3 cut(s) 923, 1111, 1119
BstXI CCANNNNNNTGG 1 cut(s) 1039
BstYI RGATCY 3 cut(s) 923, 1111, 1119
BsuRI GGCC 3 cut(s) 616, 629, 1094
BtgI CCRYGG 2 cut(s) 1038, 1224
BtgZI GCGATG 2 cut(s) 208, 229
BtsCI GGATG 2 cut(s) 338, 450
BtsI GCAGTG 1 cut(s) 1247
BtsIMutI CAGTG 5 cut(s) 62, 345, 599, 1247, 1359
BveI ACCTGC 1 cut(s) 1266
Cac8I GCNNGC 4 cut(s) 639, 841, 865, 950
CfoI GCGC 2 cut(s) 411, 643
Cfr13I GGNCC 2 cut(s) 104, 614
CseI GACGC 2 cut(s) 266, 349
Csp6I GTAC 3 cut(s) 198, 1084, 1317
CspCI CAANNNNNGTGG 2 cut(s) 606, 641
CviAII CATG 4 cut(s) 205, 328, 550, 886
CviQI GTAC 3 cut(s) 198, 1084, 1317
DdeI CTNAG 2 cut(s) 382, 686
DpnI GATC 6 cut(s) 117, 662, 925, 1113, 1121, 1221
DpnII GATC 6 cut(s) 115, 660, 923, 1111, 1119, 1219
DriI GACNNNNNGTC 1 cut(s) 550
EaeI YGGCCR 1 cut(s) 627
Eam1104I CTCTTC 1 cut(s) 284
Eam1105I GACNNNNNGTC 1 cut(s) 550
EarI CTCTTC 1 cut(s) 284
EciI GGCGGA 1 cut(s) 821
Eco130I CCWWGG 2 cut(s) 139, 1095
Eco32I GATATC 1 cut(s) 1105
Eco47I GGWCC 1 cut(s) 104
Eco47III AGCGCT 1 cut(s) 410
Eco57I CTGAAG 1 cut(s) 717
Eco88I CYCGRG 2 cut(s) 538, 668
EcoRII CCWGG 2 cut(s) 76, 492
EcoRV GATATC 1 cut(s) 1105
EcoT14I CCWWGG 2 cut(s) 139, 1095
ErhI CCWWGG 2 cut(s) 139, 1095
Esp3I CGTCTC 1 cut(s) 825
FaeI CATG 4 cut(s) 208, 331, 553, 889
FalI AAGNNNNNCTT 4 cut(s) 398, 430, 551, 583
FaqI GGGAC 1 cut(s) 90
FatI CATG 4 cut(s) 204, 327, 549, 885
FauI CCCGC 1 cut(s) 575
Fnu4HI GCNGC 2 cut(s) 352, 710
FokI GGATG 2 cut(s) 325, 437
Fsp4HI GCNGC 2 cut(s) 352, 710
GlaI GCGC 2 cut(s) 410, 642
GluI GCNGC 2 cut(s) 352, 710
HaeII RGCGCY 1 cut(s) 412
HaeIII GGCC 3 cut(s) 616, 629, 1094
HapII CCGG 4 cut(s) 213, 1070, 1133, 1248
HgaI GACGC 2 cut(s) 266, 349
HhaI GCGC 2 cut(s) 411, 643
Hin1I GRCGYC 1 cut(s) 258
Hin1II CATG 4 cut(s) 208, 331, 553, 889
Hin6I GCGC 2 cut(s) 409, 641
HinP1I GCGC 2 cut(s) 409, 641
HindIII AAGCTT 3 cut(s) 56, 837, 890
HinfI GANTC 5 cut(s) 32, 168, 779, 823, 1129
HpaII CCGG 4 cut(s) 213, 1070, 1133, 1248
HphI GGTGA 1 cut(s) 1181
Hpy188I TCNGA 6 cut(s) 31, 385, 589, 828, 956, 1116
Hpy188III TCNNGA 4 cut(s) 374, 820, 1133, 1208
Hpy99I CGWCG 3 cut(s) 260, 548, 787
HpyAV CCTTC 8 cut(s) 21, 106, 229, 352, 1084, 1160, 1246, 1310
HpyCH4III ACNGT 5 cut(s) 190, 1179, 1228, 1321, 1336
HpyCH4IV ACGT 3 cut(s) 304, 309, 1358
HpyCH4V TGCA 6 cut(s) 47, 712, 731, 943, 1275, 1349
HpyF10VI GCNNNNNNNGC 4 cut(s) 87, 357, 682, 949
HpyF3I CTNAG 2 cut(s) 382, 686
HpySE526I ACGT 3 cut(s) 304, 309, 1358
Hsp92I GRCGYC 1 cut(s) 258
Hsp92II CATG 4 cut(s) 208, 331, 553, 889
HspAI GCGC 2 cut(s) 409, 641
Kpn2I TCCGGA 1 cut(s) 1132
Kzo9I GATC 6 cut(s) 115, 660, 923, 1111, 1119, 1219
LmnI GCTCC 3 cut(s) 221, 658, 957
Lsp1109I GCAGC 1 cut(s) 696
LweI GCATC 3 cut(s) 139, 757, 1358
MaeII ACGT 3 cut(s) 304, 309, 1358
MaeIII GTNAC 4 cut(s) 305, 997, 1327, 1354
MalI GATC 6 cut(s) 117, 662, 925, 1113, 1121, 1221
MboI GATC 6 cut(s) 115, 660, 923, 1111, 1119, 1219
MboII GAAGA 8 cut(s) 9, 91, 148, 184, 271, 559, 710, 1129
MflI RGATCY 3 cut(s) 923, 1111, 1119
MluCI AATT 1 cut(s) 504
MlyI GAGTC 2 cut(s) 26, 788
MmeI TCCRAC 3 cut(s) 501, 901, 993
MroI TCCGGA 1 cut(s) 1132
MroXI GAANNNNTTC 1 cut(s) 815
MseI TTAA 4 cut(s) 558, 908, 978, 1280
MslI CAYNNNNRTG 1 cut(s) 326
MspI CCGG 4 cut(s) 213, 1070, 1133, 1248
MspR9I CCNGG 4 cut(s) 78, 213, 494, 1249
MvaI CCWGG 2 cut(s) 78, 494
MvnI CGCG 2 cut(s) 360, 641
MwoI GCNNNNNNNGC 4 cut(s) 87, 357, 682, 949
NciI CCSGG 2 cut(s) 213, 1249
NdeII GATC 6 cut(s) 115, 660, 923, 1111, 1119, 1219
NlaIII CATG 4 cut(s) 208, 331, 553, 889
NlaIV GGNNCC 8 cut(s) 106, 217, 322, 607, 654, 925, 1074, 1113
NmeAIII GCCGAG 1 cut(s) 986
NmuCI GTSAC 2 cut(s) 1327, 1354
NspI RCATGY 3 cut(s) 208, 331, 553
PciI ACATGT 1 cut(s) 549
PcsI WCGNNNNNNNCGW 1 cut(s) 252
PdmI GAANNNNTTC 1 cut(s) 815
PfeI GAWTC 3 cut(s) 168, 823, 1129
PflFI GACNNNGTC 1 cut(s) 1033
PkrI GCNGC 2 cut(s) 353, 711
PleI GAGTC 2 cut(s) 26, 787
PpsI GAGTC 2 cut(s) 26, 787
PscI ACATGT 1 cut(s) 549
Psp6I CCWGG 2 cut(s) 76, 492
PspGI CCWGG 2 cut(s) 76, 492
PspN4I GGNNCC 8 cut(s) 106, 217, 322, 607, 654, 925, 1074, 1113
PspPI GGNCC 2 cut(s) 104, 614
PsuI RGATCY 3 cut(s) 923, 1111, 1119
PsyI GACNNNGTC 1 cut(s) 1033
RsaI GTAC 3 cut(s) 199, 1085, 1318
RsaNI GTAC 3 cut(s) 198, 1084, 1317
RseI CAYNNNNRTG 1 cut(s) 326
SaqAI TTAA 4 cut(s) 558, 908, 978, 1280
SatI GCNGC 2 cut(s) 352, 710
Sau3AI GATC 6 cut(s) 115, 660, 923, 1111, 1119, 1219
Sau96I GGNCC 2 cut(s) 104, 614
SchI GAGTC 2 cut(s) 26, 788
ScrFI CCNGG 4 cut(s) 78, 213, 494, 1249
SfaNI GCATC 3 cut(s) 139, 757, 1358
SinI GGWCC 1 cut(s) 104
SmiMI CAYNNNNRTG 1 cut(s) 326
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
Sse9I AATT 1 cut(s) 504
SsiI CCGC 7 cut(s) 351, 582, 656, 806, 927, 946, 971
StyD4I CCNGG 4 cut(s) 76, 211, 492, 1247
StyI CCWWGG 2 cut(s) 139, 1095
TaaI ACNGT 5 cut(s) 190, 1179, 1228, 1321, 1336
TaiI ACGT 3 cut(s) 307, 312, 1361
TaqI TCGA 5 cut(s) 255, 282, 297, 746, 1199
TaqII GACCGA 1 cut(s) 92
TasI AATT 1 cut(s) 504
TatI WGTACW 1 cut(s) 1316
TauI GCSGC 1 cut(s) 354
TfiI GAWTC 3 cut(s) 168, 823, 1129
Tru1I TTAA 4 cut(s) 558, 908, 978, 1280
Tru9I TTAA 4 cut(s) 558, 908, 978, 1280
TscAI CASTG 5 cut(s) 69, 352, 606, 1247, 1359
TseFI GTSAC 2 cut(s) 1327, 1354
TseI GCWGC 1 cut(s) 709
Tsp45I GTSAC 2 cut(s) 1327, 1354
TspDTI ATGAA 6 cut(s) 211, 439, 553, 902, 975, 1329
TspGWI ACGGA 3 cut(s) 185, 1027, 1065
TspRI CASTG 5 cut(s) 69, 352, 606, 1247, 1359
Tth111I GACNNNGTC 1 cut(s) 1033
VpaK11BI GGWCC 1 cut(s) 104
XapI RAATTY 1 cut(s) 504
XceI RCATGY 3 cut(s) 208, 331, 553
XmnI GAANNNNTTC 1 cut(s) 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.