Rw6G009710

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
16295387 .. 16297243
1857 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G009710.1

Sequence Viewer

Length: 1467 bp
ATGTCTTCATCTTCTTCTTCTTCTTCAAACCCATCTGACTCATCATCATCTGCACCACCAAAGCTTCCATTGAAACCAATCCCAGGCGACTATGGCTTACCCTTCTTCGGTCCCATCAAAGATCGTTACAACTATTTCTACAACCAAGGAAAAGATGAGTTCTTCAAAACCCGAATCCAAAAGTACAACTCCACAGTCTTCCGTACAAACATGCCTCCCGGCTCCTTCATCGCTTCAAACCCTAAAGTCATCGCAGTCCTCGACGCGGTGAGCTTCCCTGTTCTCTTCGACACCTCCAAAGTCGAAAAACGTAACGTCTTGGACGGCACCTACATGCCCTCCACATCCTTCACCGGCGGCTATCGCGTCTGTGCCTATCTCGACCCCTCAGAACCGAACCACACTTCTCTCAAGCGCTTCTTCTTGTCTCTACTCGCCAGTCGCCACCACAAGTTCATCCCACTCTTCCAAAACCACTTGTCAGACCTCTTTCTCAACCTGGAAACTGAAATTTCAAAAAATGGCAAAGCAGACTTCAACACCCCGAGCGACGACATGTCCTTTAAGTTCGTCTTCTCGCTGTTCTGCGGGTCAGAAAATACTTCATTGGGTTCCAAAGGGCCATACTTGGTGGCCGCATGGCTCGCGCCACAACTGGCTCCGCAGATCACACTCGGGTCGCCCAAGTTGCTGAGCTTTGCTGAAGATTTGTTGCTGCACACTTTTTCCTACCCTGCATTTTTGGTCAAATCGACCTACAAGAAGCTCTACGATGCGTTTTACGAGTCGTCGGCTTCGGTTTTGGACGAGGCCGAGAATAGTTTCGGGATTCCGAGAGACGAAGCTTGCCACAACCTTTTGTTTTTGGCTTGCTTCAATGCTTTTGGTGGCATGAAGCTTTTGTTCCCTGCTTTAATCAAGTGGGTTGGATCCGCAGGAGAGGATTTGCACCGCCAGCTCCGAAATGAAATCAGGGCCCTTGTTAAGGAAAATGATGGGAATGTTACTTTCTCAGCGTTGGATAAGATGAATTTGACCAAGTCCGTGGTTTATGAGGCTTTGAGGATTGAACCTCCGGTTCCGTTCCAGTACGGGAAGGCCAAGGAGGATATCATGGTCCATAGCCATGACGCAGCATTTGAGATCAAAAAGGGGGAAATGATCTTCGGATATCAGCCGTTCGCCACAAAGGATCCGAAGATTTTCGAGAATCCGGAGGAGTTTGTGGGGCATAGGTTTGTAGGAGAAGGTGAGAAATTGTTGAAGTATGTTTATTGGTCAAATGGTCGCGAGACCGATGATCCGACGGTGGAGAATAAGCAGTGCGCGGGGAAGAATTTGGTGTTGCTTGTGTCGAGGTTAATGTTGGTAGAGTTTTTCCTTCGATATGACACTTTTACCGTTGATGTGACTACGGCTTCATTGGGTGCATCAATGACGTTCAAAACATTGACCAAAGCCTCCTGA

Protein Analysis

488

Amino Acids

54.64

Weight (kDa)

6.81

Isoelectric Point (pI)

37.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 316 - 429 4.8e-16 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 326
AccII CGCG 5 cut(s) 266, 366, 647, 1290, 1328
AccIII TCCGGA 1 cut(s) 1213
AciI CCGC 8 cut(s) 266, 357, 588, 636, 662, 933, 952, 1328
AclWI GGATC 5 cut(s) 924, 937, 1187, 1200, 1295
AcoI YGGCCR 1 cut(s) 633
AcsI RAATTY 3 cut(s) 510, 1030, 1336
AcuI CTGAAG 1 cut(s) 723
AfaI GTAC 3 cut(s) 185, 205, 1091
AfeI AGCGCT 1 cut(s) 416
AfiI CCNNNNNNNGG 4 cut(s) 83, 107, 265, 985
AflIII ACRYGT 1 cut(s) 555
AhdI GACNNNNNGTC 1 cut(s) 556
AjnI CCWGG 2 cut(s) 82, 498
AluBI AGCT 7 cut(s) 64, 273, 696, 766, 845, 898, 958
AluI AGCT 7 cut(s) 64, 273, 696, 766, 845, 898, 958
Alw26I GTCTC 3 cut(s) 432, 831, 1286
AlwI GGATC 5 cut(s) 924, 937, 1187, 1200, 1295
Ama87I CYCGRG 2 cut(s) 544, 674
Aor13HI TCCGGA 1 cut(s) 1213
Aor51HI AGCGCT 1 cut(s) 416
AoxI GGCC 5 cut(s) 620, 633, 810, 975, 1098
ApaI GGGCCC 1 cut(s) 979
ApeKI GCWGC 2 cut(s) 715, 1133
ApoI RAATTY 3 cut(s) 510, 1030, 1336
ArsI GACNNNNNNTTYG 2 cut(s) 1121, 1153
Asp700I GAANNNNTTC 2 cut(s) 821, 1202
AspLEI GCGC 3 cut(s) 417, 649, 1328
AspS9I GGNCC 5 cut(s) 110, 620, 975, 976, 1117
AsuC2I CCSGG 1 cut(s) 219
AsuHPI GGTGA 3 cut(s) 280, 343, 1262
AvaI CYCGRG 2 cut(s) 544, 674
AvaII GGWCC 2 cut(s) 110, 1117
BaeGI GKGCMC 1 cut(s) 979
BamHI GGATCC 2 cut(s) 929, 1192
BanI GGYRCC 1 cut(s) 326
BanII GRGCYC 1 cut(s) 979
BbsI GAAGAC 2 cut(s) 190, 565
BbvI GCAGC 2 cut(s) 702, 1145
BccI CCATC 3 cut(s) 40, 122, 989
BceAI ACGGC 3 cut(s) 340, 1162, 1431
BciT130I CCWGG 2 cut(s) 84, 500
BcnI CCSGG 1 cut(s) 219
BcoDI GTCTC 3 cut(s) 432, 831, 1286
BfoI RGCGCY 1 cut(s) 418
BisI GCNGC 4 cut(s) 358, 636, 716, 1134
BlpI GCTNAGC 1 cut(s) 692
BlsI GCNGC 4 cut(s) 359, 637, 717, 1135
Bme1390I CCNGG 3 cut(s) 84, 219, 500
Bme18I GGWCC 2 cut(s) 110, 1117
BmeRI GACNNNNNGTC 1 cut(s) 556
BmeT110I CYCGRG 2 cut(s) 544, 674
BmgT120I GGNCC 5 cut(s) 110, 620, 975, 976, 1117
BmiI GGNNCC 9 cut(s) 112, 223, 328, 613, 660, 931, 977, 1080, 1194
BmrFI CCNGG 3 cut(s) 84, 219, 500
BmsI GCATC 2 cut(s) 763, 1439
BpiI GAAGAC 2 cut(s) 190, 565
Bpu1102I GCTNAGC 1 cut(s) 692
BpuEI CTTGAG 1 cut(s) 395
BpuMI CCSGG 1 cut(s) 219
BsaI GGTCTC 1 cut(s) 1286
BsaJI CCNNGG 4 cut(s) 82, 145, 1044, 1101
BsaWI WCCGGW 2 cut(s) 1075, 1213
BsaXI ACNNNNNCTCC 2 cut(s) 323, 353
Bsc4I CCNNNNNNNGG 4 cut(s) 83, 107, 265, 985
Bse118I RCCGGY 1 cut(s) 353
Bse1I ACTGG 3 cut(s) 438, 660, 1087
BseAI TCCGGA 1 cut(s) 1213
BseBI CCWGG 2 cut(s) 84, 500
BseDI CCNNGG 4 cut(s) 82, 145, 1044, 1101
BseGI GGATG 2 cut(s) 344, 456
BseLI CCNNNNNNNGG 4 cut(s) 83, 107, 265, 985
BseMII CTCAG 3 cut(s) 402, 683, 1026
BseNI ACTGG 3 cut(s) 438, 660, 1087
BseRI GAGGAG 1 cut(s) 1232
BseSI GKGCMC 1 cut(s) 979
BseXI GCAGC 2 cut(s) 702, 1145
BsgI GTGCAG 2 cut(s) 36, 701
Bsh1236I CGCG 5 cut(s) 266, 366, 647, 1290, 1328
BshFI GGCC 5 cut(s) 622, 635, 812, 977, 1100
BshNI GGYRCC 1 cut(s) 326
BsiHKCI CYCGRG 2 cut(s) 544, 674
BsiSI CCGG 4 cut(s) 219, 354, 1076, 1214
BslFI GGGAC 1 cut(s) 96
BslI CCNNNNNNNGG 4 cut(s) 83, 107, 265, 985
BsmAI GTCTC 3 cut(s) 432, 831, 1286
BsmBI CGTCTC 1 cut(s) 831
BsmFI GGGAC 1 cut(s) 96
BsnI GGCC 5 cut(s) 622, 635, 812, 977, 1100
Bso31I GGTCTC 1 cut(s) 1286
BsoBI CYCGRG 2 cut(s) 544, 674
Bsp120I GGGCCC 1 cut(s) 975
Bsp1286I GDGCHC 1 cut(s) 979
Bsp13I TCCGGA 1 cut(s) 1213
Bsp143I GATC 7 cut(s) 121, 666, 929, 1143, 1161, 1192, 1300
Bsp1720I GCTNAGC 1 cut(s) 692
Bsp68I TCGCGA 1 cut(s) 1290
BspACI CCGC 8 cut(s) 266, 357, 588, 636, 662, 933, 952, 1328
BspANI GGCC 5 cut(s) 622, 635, 812, 977, 1100
BspCNI CTCAG 3 cut(s) 401, 684, 1025
BspEI TCCGGA 1 cut(s) 1213
BspFNI CGCG 5 cut(s) 266, 366, 647, 1290, 1328
BspLI GGNNCC 9 cut(s) 112, 223, 328, 613, 660, 931, 977, 1080, 1194
BspPI GGATC 5 cut(s) 924, 937, 1187, 1200, 1295
BspT107I GGYRCC 1 cut(s) 326
BspTNI GGTCTC 1 cut(s) 1286
BsrFI RCCGGY 1 cut(s) 353
BsrI ACTGG 3 cut(s) 438, 660, 1087
BssAI RCCGGY 1 cut(s) 353
BssECI CCNNGG 4 cut(s) 82, 145, 1044, 1101
BssMI GATC 7 cut(s) 121, 666, 929, 1143, 1161, 1192, 1300
BssT1I CCWWGG 2 cut(s) 145, 1101
Bst2UI CCWGG 2 cut(s) 84, 500
Bst4CI ACNGT 3 cut(s) 196, 1309, 1402
Bst6I CTCTTC 2 cut(s) 290, 470
BstC8I GCNNGC 4 cut(s) 645, 847, 871, 956
BstDEI CTNAG 3 cut(s) 388, 692, 1012
BstDSI CCRYGG 1 cut(s) 1044
BstENI CCTNNNNNAGG 1 cut(s) 983
BstF5I GGATG 2 cut(s) 344, 456
BstFNI CGCG 5 cut(s) 266, 366, 647, 1290, 1328
BstH2I RGCGCY 1 cut(s) 418
BstHHI GCGC 3 cut(s) 417, 649, 1328
BstKTI GATC 7 cut(s) 124, 669, 932, 1146, 1164, 1195, 1303
BstMAI GTCTC 3 cut(s) 432, 831, 1286
BstMBI GATC 7 cut(s) 121, 666, 929, 1143, 1161, 1192, 1300
BstMWI GCNNNNNNNGC 5 cut(s) 93, 363, 644, 688, 955
BstNI CCWGG 2 cut(s) 84, 500
BstNSI RCATGY 3 cut(s) 214, 337, 559
BstSCI CCNGG 3 cut(s) 82, 217, 498
BstSLI GKGCMC 1 cut(s) 979
BstUI CGCG 5 cut(s) 266, 366, 647, 1290, 1328
BstV1I GCAGC 2 cut(s) 702, 1145
BstV2I GAAGAC 2 cut(s) 190, 565
BstX2I RGATCY 2 cut(s) 929, 1192
BstXI CCANNNNNNTGG 1 cut(s) 1045
BstYI RGATCY 2 cut(s) 929, 1192
BsuRI GGCC 5 cut(s) 622, 635, 812, 977, 1100
BtgI CCRYGG 1 cut(s) 1044
BtgZI GCGATG 2 cut(s) 214, 235
BtsCI GGATG 2 cut(s) 344, 456
BtsI GCAGTG 1 cut(s) 1328
BtsIMutI CAGTG 1 cut(s) 1328
BtuMI TCGCGA 1 cut(s) 1290
Cac8I GCNNGC 4 cut(s) 645, 847, 871, 956
CfoI GCGC 3 cut(s) 417, 649, 1328
Cfr10I RCCGGY 1 cut(s) 353
Cfr13I GGNCC 5 cut(s) 110, 620, 975, 976, 1117
CseI GACGC 3 cut(s) 272, 355, 1139
Csp6I GTAC 3 cut(s) 184, 204, 1090
CviAII CATG 7 cut(s) 211, 334, 556, 639, 892, 1114, 1127
CviQI GTAC 3 cut(s) 184, 204, 1090
DdeI CTNAG 3 cut(s) 388, 692, 1012
DpnI GATC 7 cut(s) 123, 668, 931, 1145, 1163, 1194, 1302
DpnII GATC 7 cut(s) 121, 666, 929, 1143, 1161, 1192, 1300
DriI GACNNNNNGTC 1 cut(s) 556
EaeI YGGCCR 1 cut(s) 633
Eam1104I CTCTTC 2 cut(s) 290, 470
Eam1105I GACNNNNNGTC 1 cut(s) 556
EarI CTCTTC 2 cut(s) 290, 470
Eco130I CCWWGG 2 cut(s) 145, 1101
Eco24I GRGCYC 1 cut(s) 979
Eco31I GGTCTC 1 cut(s) 1286
Eco32I GATATC 2 cut(s) 1111, 1172
Eco47I GGWCC 2 cut(s) 110, 1117
Eco47III AGCGCT 1 cut(s) 416
Eco57I CTGAAG 1 cut(s) 723
Eco88I CYCGRG 2 cut(s) 544, 674
EcoNI CCTNNNNNAGG 1 cut(s) 983
EcoO109I RGGNCCY 2 cut(s) 975, 976
EcoRII CCWGG 2 cut(s) 82, 498
EcoRV GATATC 2 cut(s) 1111, 1172
EcoT14I CCWWGG 2 cut(s) 145, 1101
EcoT38I GRGCYC 1 cut(s) 979
ErhI CCWWGG 2 cut(s) 145, 1101
Esp3I CGTCTC 1 cut(s) 831
FaeI CATG 7 cut(s) 214, 337, 559, 642, 895, 1117, 1130
FalI AAGNNNNNCTT 4 cut(s) 404, 436, 557, 589
FaqI GGGAC 1 cut(s) 96
FatI CATG 7 cut(s) 210, 333, 555, 638, 891, 1113, 1126
FauI CCCGC 2 cut(s) 581, 1321
Fnu4HI GCNGC 4 cut(s) 358, 636, 716, 1134
FokI GGATG 2 cut(s) 331, 443
FriOI GRGCYC 1 cut(s) 979
Fsp4HI GCNGC 4 cut(s) 358, 636, 716, 1134
GlaI GCGC 3 cut(s) 416, 648, 1327
GluI GCNGC 4 cut(s) 358, 636, 716, 1134
HaeII RGCGCY 1 cut(s) 418
HaeIII GGCC 5 cut(s) 622, 635, 812, 977, 1100
HapII CCGG 4 cut(s) 219, 354, 1076, 1214
HgaI GACGC 3 cut(s) 272, 355, 1139
HhaI GCGC 3 cut(s) 417, 649, 1328
Hin1II CATG 7 cut(s) 214, 337, 559, 642, 895, 1117, 1130
Hin6I GCGC 3 cut(s) 415, 647, 1326
HinP1I GCGC 3 cut(s) 415, 647, 1326
HindIII AAGCTT 3 cut(s) 62, 843, 896
HinfI GANTC 5 cut(s) 38, 174, 785, 829, 1210
HpaII CCGG 4 cut(s) 219, 354, 1076, 1214
HphI GGTGA 3 cut(s) 280, 343, 1262
Hpy188I TCNGA 9 cut(s) 37, 391, 484, 595, 834, 962, 1169, 1197, 1305
Hpy188III TCNNGA 6 cut(s) 380, 826, 1207, 1214, 1289, 1464
Hpy99I CGWCG 4 cut(s) 266, 554, 793, 1309
HpyAV CCTTC 6 cut(s) 112, 235, 358, 1090, 1241, 1391
HpyCH4III ACNGT 3 cut(s) 196, 1309, 1402
HpyCH4IV ACGT 3 cut(s) 310, 315, 1439
HpyCH4V TGCA 5 cut(s) 53, 718, 737, 949, 1430
HpyF10VI GCNNNNNNNGC 5 cut(s) 93, 363, 644, 688, 955
HpyF3I CTNAG 3 cut(s) 388, 692, 1012
HpySE526I ACGT 3 cut(s) 310, 315, 1439
Hsp92II CATG 7 cut(s) 214, 337, 559, 642, 895, 1117, 1130
HspAI GCGC 3 cut(s) 415, 647, 1326
Kpn2I TCCGGA 1 cut(s) 1213
Kzo9I GATC 7 cut(s) 121, 666, 929, 1143, 1161, 1192, 1300
LmnI GCTCC 3 cut(s) 227, 664, 963
Lsp1109I GCAGC 2 cut(s) 702, 1145
LweI GCATC 2 cut(s) 763, 1439
MaeII ACGT 3 cut(s) 310, 315, 1439
MaeIII GTNAC 4 cut(s) 125, 311, 1003, 1408
MalI GATC 7 cut(s) 123, 668, 931, 1145, 1163, 1194, 1302
MboI GATC 7 cut(s) 121, 666, 929, 1143, 1161, 1192, 1300
MflI RGATCY 2 cut(s) 929, 1192
MhlI GDGCHC 1 cut(s) 979
MluCI AATT 4 cut(s) 510, 1030, 1256, 1336
MlyI GAGTC 2 cut(s) 32, 794
MmeI TCCRAC 3 cut(s) 907, 999, 1328
MroI TCCGGA 1 cut(s) 1213
MroXI GAANNNNTTC 2 cut(s) 821, 1202
MseI TTAA 4 cut(s) 564, 914, 984, 1361
MslI CAYNNNNRTG 2 cut(s) 332, 1125
MspI CCGG 4 cut(s) 219, 354, 1076, 1214
MspR9I CCNGG 3 cut(s) 84, 219, 500
MvaI CCWGG 2 cut(s) 84, 500
MvnI CGCG 5 cut(s) 266, 366, 647, 1290, 1328
MwoI GCNNNNNNNGC 5 cut(s) 93, 363, 644, 688, 955
NciI CCSGG 1 cut(s) 219
NdeII GATC 7 cut(s) 121, 666, 929, 1143, 1161, 1192, 1300
NlaIII CATG 7 cut(s) 214, 337, 559, 642, 895, 1117, 1130
NlaIV GGNNCC 9 cut(s) 112, 223, 328, 613, 660, 931, 977, 1080, 1194
NmeAIII GCCGAG 1 cut(s) 838
NmuCI GTSAC 1 cut(s) 1408
NruI TCGCGA 1 cut(s) 1290
NspI RCATGY 3 cut(s) 214, 337, 559
PciI ACATGT 1 cut(s) 555
PcsI WCGNNNNNNNCGW 1 cut(s) 258
PdmI GAANNNNTTC 2 cut(s) 821, 1202
PfeI GAWTC 3 cut(s) 174, 829, 1210
PflFI GACNNNGTC 1 cut(s) 1039
PkrI GCNGC 4 cut(s) 359, 637, 717, 1135
PleI GAGTC 2 cut(s) 32, 793
PpsI GAGTC 2 cut(s) 32, 793
PscI ACATGT 1 cut(s) 555
Psp6I CCWGG 2 cut(s) 82, 498
PspGI CCWGG 2 cut(s) 82, 498
PspN4I GGNNCC 9 cut(s) 112, 223, 328, 613, 660, 931, 977, 1080, 1194
PspOMI GGGCCC 1 cut(s) 975
PspPI GGNCC 5 cut(s) 110, 620, 975, 976, 1117
PsuI RGATCY 2 cut(s) 929, 1192
PsyI GACNNNGTC 1 cut(s) 1039
RruI TCGCGA 1 cut(s) 1290
RsaI GTAC 3 cut(s) 185, 205, 1091
RsaNI GTAC 3 cut(s) 184, 204, 1090
RseI CAYNNNNRTG 2 cut(s) 332, 1125
SaqAI TTAA 4 cut(s) 564, 914, 984, 1361
SatI GCNGC 4 cut(s) 358, 636, 716, 1134
Sau3AI GATC 7 cut(s) 121, 666, 929, 1143, 1161, 1192, 1300
Sau96I GGNCC 5 cut(s) 110, 620, 975, 976, 1117
SchI GAGTC 2 cut(s) 32, 794
ScrFI CCNGG 3 cut(s) 84, 219, 500
SduI GDGCHC 1 cut(s) 979
SfaNI GCATC 2 cut(s) 763, 1439
SgrAI CRCCGGYG 1 cut(s) 353
SinI GGWCC 2 cut(s) 110, 1117
SmiMI CAYNNNNRTG 2 cut(s) 332, 1125
SmlI CTYRAG 1 cut(s) 410
SmoI CTYRAG 1 cut(s) 410
Sse9I AATT 4 cut(s) 510, 1030, 1256, 1336
SsiI CCGC 8 cut(s) 266, 357, 588, 636, 662, 933, 952, 1328
StyD4I CCNGG 3 cut(s) 82, 217, 498
StyI CCWWGG 2 cut(s) 145, 1101
TaaI ACNGT 3 cut(s) 196, 1309, 1402
TaiI ACGT 3 cut(s) 313, 318, 1442
TaqI TCGA 8 cut(s) 261, 288, 303, 381, 752, 1206, 1355, 1384
TaqII GACCGA 2 cut(s) 98, 1310
TasI AATT 4 cut(s) 510, 1030, 1256, 1336
TatI WGTACW 1 cut(s) 183
TauI GCSGC 2 cut(s) 360, 638
TfiI GAWTC 3 cut(s) 174, 829, 1210
Tru1I TTAA 4 cut(s) 564, 914, 984, 1361
Tru9I TTAA 4 cut(s) 564, 914, 984, 1361
TscAI CASTG 1 cut(s) 1328
TseFI GTSAC 1 cut(s) 1408
TseI GCWGC 2 cut(s) 715, 1133
Tsp45I GTSAC 1 cut(s) 1408
TspDTI ATGAA 7 cut(s) 217, 445, 594, 908, 981, 1043, 1410
TspGWI ACGGA 3 cut(s) 191, 1033, 1071
TspRI CASTG 1 cut(s) 1328
Tth111I GACNNNGTC 1 cut(s) 1039
VpaK11BI GGWCC 2 cut(s) 110, 1117
XagI CCTNNNNNAGG 1 cut(s) 983
XapI RAATTY 3 cut(s) 510, 1030, 1336
XceI RCATGY 3 cut(s) 214, 337, 559
XmnI GAANNNNTTC 2 cut(s) 821, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.