Rw6G009630

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
16187083 .. 16188538
1456 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G009630.1

Sequence Viewer

Length: 1290 bp
ATGTCTTCACAAAAAGAAGATCGAAAACCAGAACCAGAGCTTCCCTTGAGAGAAATCCCTGGGGACTATGGCGTGCCCTTCCTTGGGCCCATCAAAGATCGCCTAGACTATTTCTACAACCAAGGCAGAGACAACTTCTTCATCTCCCGAATCCTAAAGCACCAATCCACAGTCTTTAGGACCAACATGCCTCCTGGTCCCCTCATTGCTTCAAACCCCAACGTCGTCGTTCTCCTCGATGCCAAAAGCTTCCCCGTTCTCTTGGACACTTCCAAAGTCGAAAAACGAGACGTATTCACCGGAACTTATATGTCCTCGACCGCCTTCACCGGTGGCTACCGCATTTGCTCTTATCTCGACCCCTCGGAGCCGGACCATGCAGCTCTCAAGTACTGGTTCTTGTCCCAGCTCTCCGCTCGCAAAGACAGAGTTATACCACTCTTTCGAAACCACTTACCACCATCGGACACAACTTTGAGGACCAAGGGTCCAATCTTTGTGTCCCTCTGGCTCTTGCCCCAGCTTTCTCCTCAGATAACACTAGGGTTGCCCAAGTTTCTAAACTTTGTCGAAGATCTCTTGCTCCACACTGTTCCATTTCCTGCTCTTCTTGTCAAACCATTCTACAACAAGCTTTACAATGTCTTTTGGGACTCCGCAACTTCGGCTTTGGACGAGGCCGAGAGGCTTGGGATTCCGAGAGATGAGGCTTGCCACAACCTGGTGTTCTTGGTATGCTTCAATGCTTATGGCGGCATGAAGCTTTTGTTCCCTGCTTTGTTGAAAACCGCTGTTAAAGAGGCCGGAGGAAAGGTAACCCTATCAGCATTGGAGAAGATGAACTTGACAAAATCGGTGGTTTATGAAGCCCTGAGGATTGAGCCGCCGGTGCCATTCCAGTACGGTAAGGCCAAGAGGGACATGATAGTCCGCAGCCATGATGCTGCGTATGAGATCAAGGAAGGGGAGATGTTGTTTGGTTACCAAACTATAGCAGAAAGGGATCCGAAGATTTTCGAGAATCCTAATGAGTTTGTGGGAGATAGGTTTGTTGGGGAGGGAGAGAAGCTGTTGGAGTACGTGTGGTGGTCCAACGGCCCGGAGACGAAGAGTCCGACGGTGGAGGATAAGCAGTGTGCAGGGAAAGATCTGGTGGTGCTCATGAATAGGATTCTGTTGGTAGAGTTCTTCCTTCGTTATGATACTTTCATTGTTGACGTGGGGATATCTTTGTTGGGACCAAAAGTGACGTTCAAAACGTTGATAGAAAATGCATCATATATTGATTAG

Protein Analysis

429

Amino Acids

48.68

Weight (kDa)

6.37

Isoelectric Point (pI)

38.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 267 - 355 7.6e-12 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 926
AccB1I GGYRCC 1 cut(s) 889
AccB7I CCANNNNNTGG 1 cut(s) 721
AccBSI CCGCTC 1 cut(s) 416
AciI CCGC 8 cut(s) 321, 340, 414, 657, 753, 789, 884, 931
AclI AACGTT 1 cut(s) 1259
AclWI GGATC 2 cut(s) 998, 1011
AfaI GTAC 3 cut(s) 392, 902, 1079
AfiI CCNNNNNNNGG 3 cut(s) 83, 84, 721
AflIII ACRYGT 1 cut(s) 1080
AgeI ACCGGT 1 cut(s) 329
AgsI TTSAA 4 cut(s) 213, 742, 784, 1255
AhdI GACNNNNNGTC 2 cut(s) 486, 1110
AjiI CACGTC 1 cut(s) 1219
AjnI CCWGG 3 cut(s) 58, 193, 720
AluBI AGCT 8 cut(s) 40, 249, 383, 409, 523, 634, 763, 1069
AluI AGCT 8 cut(s) 40, 249, 383, 409, 523, 634, 763, 1069
Alw21I GWGCWC 1 cut(s) 1161
Alw26I GTCTC 3 cut(s) 123, 282, 1097
AlwI GGATC 2 cut(s) 998, 1011
AoxI GGCC 5 cut(s) 86, 678, 801, 909, 1096
ApaI GGGCCC 1 cut(s) 90
ApeKI GCWGC 3 cut(s) 380, 933, 944
AsiGI ACCGGT 1 cut(s) 329
Asp700I GAANNNNTTC 1 cut(s) 1013
AsuC2I CCSGG 1 cut(s) 1100
AsuHPI GGTGA 2 cut(s) 289, 319
AsuII TTCGAA 1 cut(s) 445
AvaII GGWCC 7 cut(s) 180, 197, 373, 480, 488, 1089, 1238
AxyI CCTNAGG 1 cut(s) 872
BaeGI GKGCMC 2 cut(s) 78, 90
BamHI GGATCC 1 cut(s) 1003
BanI GGYRCC 1 cut(s) 889
BanII GRGCYC 1 cut(s) 90
Bbv12I GWGCWC 1 cut(s) 1161
BbvI GCAGC 3 cut(s) 392, 931, 945
BccI CCATC 2 cut(s) 98, 469
BceAI ACGGC 1 cut(s) 1111
BciT130I CCWGG 3 cut(s) 60, 195, 722
BcnI CCSGG 1 cut(s) 1100
BcoDI GTCTC 3 cut(s) 123, 282, 1097
BfaI CTAG 2 cut(s) 104, 542
BfmI CTRYAG 1 cut(s) 990
BglII AGATCT 2 cut(s) 574, 1147
BisI GCNGC 5 cut(s) 381, 754, 884, 934, 945
BlsI GCNGC 5 cut(s) 382, 755, 885, 935, 946
BmcAI AGTACT 1 cut(s) 392
Bme1390I CCNGG 4 cut(s) 60, 195, 722, 1100
Bme18I GGWCC 7 cut(s) 180, 197, 373, 480, 488, 1089, 1238
BmeRI GACNNNNNGTC 2 cut(s) 486, 1110
BmgBI CACGTC 1 cut(s) 1219
BmiI GGNNCC 7 cut(s) 88, 199, 369, 489, 891, 1005, 1239
BmrFI CCNGG 4 cut(s) 60, 195, 722, 1100
BmsI GCATC 3 cut(s) 229, 931, 1283
Bpu14I TTCGAA 1 cut(s) 445
BpuEI CTTGAG 2 cut(s) 67, 371
BpuMI CCSGG 1 cut(s) 1100
BsaAI YACGTR 1 cut(s) 1081
BsaJI CCNNGG 6 cut(s) 58, 59, 82, 121, 363, 483
BsaWI WCCGGW 2 cut(s) 299, 329
BsaXI ACNNNNNCTCC 6 cut(s) 798, 828, 959, 989, 1067, 1097
Bsc4I CCNNNNNNNGG 3 cut(s) 83, 84, 721
Bse118I RCCGGY 2 cut(s) 329, 886
Bse1I ACTGG 2 cut(s) 398, 898
Bse21I CCTNAGG 1 cut(s) 872
Bse3DI GCAATG 1 cut(s) 204
BseBI CCWGG 3 cut(s) 60, 195, 722
BseDI CCNNGG 6 cut(s) 58, 59, 82, 121, 363, 483
BseLI CCNNNNNNNGG 3 cut(s) 83, 84, 721
BseMI GCAATG 1 cut(s) 204
BseMII CTCAG 2 cut(s) 545, 863
BseNI ACTGG 2 cut(s) 398, 898
BseRI GAGGAG 2 cut(s) 224, 519
BseSI GKGCMC 2 cut(s) 78, 90
BseXI GCAGC 3 cut(s) 392, 931, 945
BseYI CCCAGC 2 cut(s) 405, 519
BsgI GTGCAG 1 cut(s) 1158
Bsh1285I CGRYCG 1 cut(s) 321
BshFI GGCC 5 cut(s) 88, 680, 803, 911, 1098
BshNI GGYRCC 1 cut(s) 889
BshTI ACCGGT 1 cut(s) 329
BsiEI CGRYCG 1 cut(s) 321
BsiHKAI GWGCWC 1 cut(s) 1161
BsiSI CCGG 6 cut(s) 300, 330, 371, 804, 887, 1100
BslFI GGGAC 7 cut(s) 77, 183, 388, 487, 665, 932, 1251
BslI CCNNNNNNNGG 3 cut(s) 83, 84, 721
BsmAI GTCTC 3 cut(s) 123, 282, 1097
BsmBI CGTCTC 2 cut(s) 282, 1097
BsmFI GGGAC 7 cut(s) 77, 183, 388, 487, 665, 932, 1251
BsnI GGCC 5 cut(s) 88, 680, 803, 911, 1098
Bsp119I TTCGAA 1 cut(s) 445
Bsp120I GGGCCC 1 cut(s) 86
Bsp1286I GDGCHC 3 cut(s) 78, 90, 1161
Bsp143I GATC 6 cut(s) 19, 97, 574, 954, 1003, 1147
BspACI CCGC 8 cut(s) 321, 340, 414, 657, 753, 789, 884, 931
BspANI GGCC 5 cut(s) 88, 680, 803, 911, 1098
BspCNI CTCAG 2 cut(s) 544, 864
BspHI TCATGA 1 cut(s) 1161
BspLI GGNNCC 7 cut(s) 88, 199, 369, 489, 891, 1005, 1239
BspPI GGATC 2 cut(s) 998, 1011
BspQI GCTCTTC 1 cut(s) 612
BspT104I TTCGAA 1 cut(s) 445
BspT107I GGYRCC 1 cut(s) 889
BsrBI CCGCTC 1 cut(s) 416
BsrDI GCAATG 1 cut(s) 204
BsrFI RCCGGY 2 cut(s) 329, 886
BsrI ACTGG 2 cut(s) 398, 898
BssAI RCCGGY 2 cut(s) 329, 886
BssECI CCNNGG 6 cut(s) 58, 59, 82, 121, 363, 483
BssMI GATC 6 cut(s) 19, 97, 574, 954, 1003, 1147
BssT1I CCWWGG 3 cut(s) 82, 121, 483
Bst2UI CCWGG 3 cut(s) 60, 195, 722
Bst4CI ACNGT 4 cut(s) 172, 592, 905, 1120
Bst6I CTCTTC 2 cut(s) 612, 1103
BstBAI YACGTR 1 cut(s) 1081
BstBI TTCGAA 1 cut(s) 445
BstC8I GCNNGC 3 cut(s) 74, 418, 712
BstDEI CTNAG 2 cut(s) 531, 872
BstEII GGTNACC 2 cut(s) 814, 980
BstKTI GATC 6 cut(s) 22, 100, 577, 957, 1006, 1150
BstMAI GTCTC 3 cut(s) 123, 282, 1097
BstMBI GATC 6 cut(s) 19, 97, 574, 954, 1003, 1147
BstMCI CGRYCG 1 cut(s) 321
BstMWI GCNNNNNNNGC 2 cut(s) 665, 889
BstNI CCWGG 3 cut(s) 60, 195, 722
BstNSI RCATGY 1 cut(s) 190
BstPI GGTNACC 2 cut(s) 814, 980
BstSCI CCNGG 4 cut(s) 58, 193, 720, 1098
BstSFI CTRYAG 1 cut(s) 990
BstSLI GKGCMC 2 cut(s) 78, 90
BstV1I GCAGC 3 cut(s) 392, 931, 945
BstX2I RGATCY 3 cut(s) 574, 1003, 1147
BstYI RGATCY 3 cut(s) 574, 1003, 1147
Bsu36I CCTNAGG 1 cut(s) 872
BsuRI GGCC 5 cut(s) 88, 680, 803, 911, 1098
BtrI CACGTC 1 cut(s) 1219
BtsI GCAGTG 1 cut(s) 1139
BtsIMutI CAGTG 2 cut(s) 588, 1139
Cac8I GCNNGC 3 cut(s) 74, 418, 712
CciI TCATGA 1 cut(s) 1161
Cfr10I RCCGGY 2 cut(s) 329, 886
CsiI ACCWGGT 1 cut(s) 720
Csp6I GTAC 3 cut(s) 391, 901, 1078
CspAI ACCGGT 1 cut(s) 329
CspCI CAANNNNNGTGG 2 cut(s) 837, 872
CviAII CATG 6 cut(s) 187, 377, 757, 922, 938, 1162
CviQI GTAC 3 cut(s) 391, 901, 1078
DdeI CTNAG 2 cut(s) 531, 872
DpnI GATC 6 cut(s) 21, 99, 576, 956, 1005, 1149
DpnII GATC 6 cut(s) 19, 97, 574, 954, 1003, 1147
DrdI GACNNNNNNGTC 1 cut(s) 926
DriI GACNNNNNGTC 2 cut(s) 486, 1110
DseDI GACNNNNNNGTC 1 cut(s) 926
Eam1104I CTCTTC 2 cut(s) 612, 1103
Eam1105I GACNNNNNGTC 2 cut(s) 486, 1110
EarI CTCTTC 2 cut(s) 612, 1103
Eco130I CCWWGG 3 cut(s) 82, 121, 483
Eco24I GRGCYC 1 cut(s) 90
Eco32I GATATC 1 cut(s) 1227
Eco47I GGWCC 7 cut(s) 180, 197, 373, 480, 488, 1089, 1238
Eco81I CCTNAGG 1 cut(s) 872
Eco91I GGTNACC 2 cut(s) 814, 980
EcoO65I GGTNACC 2 cut(s) 814, 980
EcoRII CCWGG 3 cut(s) 58, 193, 720
EcoRV GATATC 1 cut(s) 1227
EcoT14I CCWWGG 3 cut(s) 82, 121, 483
EcoT22I ATGCAT 1 cut(s) 1276
EcoT38I GRGCYC 1 cut(s) 90
ErhI CCWWGG 3 cut(s) 82, 121, 483
Esp3I CGTCTC 2 cut(s) 282, 1097
FaeI CATG 6 cut(s) 190, 380, 760, 925, 941, 1165
FalI AAGNNNNNCTT 2 cut(s) 827, 859
FaqI GGGAC 7 cut(s) 77, 183, 388, 487, 665, 932, 1251
FatI CATG 6 cut(s) 186, 376, 756, 921, 937, 1161
Fnu4HI GCNGC 5 cut(s) 381, 754, 884, 934, 945
FriOI GRGCYC 1 cut(s) 90
Fsp4HI GCNGC 5 cut(s) 381, 754, 884, 934, 945
FspBI CTAG 2 cut(s) 104, 542
GluI GCNGC 5 cut(s) 381, 754, 884, 934, 945
GsaI CCCAGC 2 cut(s) 409, 523
HaeIII GGCC 5 cut(s) 88, 680, 803, 911, 1098
HapII CCGG 6 cut(s) 300, 330, 371, 804, 887, 1100
Hin1II CATG 6 cut(s) 190, 380, 760, 925, 941, 1165
HincII GTYRAC 1 cut(s) 1216
HindII GTYRAC 1 cut(s) 1216
HindIII AAGCTT 3 cut(s) 247, 632, 761
HinfI GANTC 6 cut(s) 150, 653, 694, 1021, 1111, 1171
HpaII CCGG 6 cut(s) 300, 330, 371, 804, 887, 1100
HphI GGTGA 2 cut(s) 289, 319
Hpy166II GTNNAC 1 cut(s) 1216
Hpy188I TCNGA 6 cut(s) 367, 466, 534, 699, 1008, 1116
Hpy188III TCNNGA 4 cut(s) 147, 356, 1018, 1162
Hpy8I GTNNAC 1 cut(s) 1216
Hpy99I CGWCG 3 cut(s) 227, 230, 1120
HpyAV CCTTC 4 cut(s) 88, 334, 956, 1202
HpyCH4III ACNGT 4 cut(s) 172, 592, 905, 1120
HpyCH4IV ACGT 6 cut(s) 222, 291, 1080, 1218, 1250, 1259
HpyCH4V TGCA 3 cut(s) 380, 1139, 1274
HpyF10VI GCNNNNNNNGC 2 cut(s) 665, 889
HpyF3I CTNAG 2 cut(s) 531, 872
HpySE526I ACGT 6 cut(s) 222, 291, 1080, 1218, 1250, 1259
Hsp92II CATG 6 cut(s) 190, 380, 760, 925, 941, 1165
Kzo9I GATC 6 cut(s) 19, 97, 574, 954, 1003, 1147
LguI GCTCTTC 1 cut(s) 612
LmnI GCTCC 2 cut(s) 367, 588
Lsp1109I GCAGC 3 cut(s) 392, 931, 945
LweI GCATC 3 cut(s) 229, 931, 1283
MabI ACCWGGT 1 cut(s) 720
MaeI CTAG 2 cut(s) 104, 542
MaeII ACGT 6 cut(s) 222, 291, 1080, 1218, 1250, 1259
MaeIII GTNAC 3 cut(s) 814, 980, 1246
MalI GATC 6 cut(s) 21, 99, 576, 956, 1005, 1149
MbiI CCGCTC 1 cut(s) 416
MboI GATC 6 cut(s) 19, 97, 574, 954, 1003, 1147
MboII GAAGA 8 cut(s) 29, 130, 584, 599, 847, 1021, 1120, 1180
MflI RGATCY 3 cut(s) 574, 1003, 1147
MhlI GDGCHC 3 cut(s) 78, 90, 1161
MlyI GAGTC 2 cut(s) 647, 1120
MmeI TCCRAC 3 cut(s) 1053, 1116, 1139
Mph1103I ATGCAT 1 cut(s) 1276
MroXI GAANNNNTTC 1 cut(s) 1013
MseI TTAA 1 cut(s) 795
MspA1I CMGCKG 1 cut(s) 791
MspI CCGG 6 cut(s) 300, 330, 371, 804, 887, 1100
MspR9I CCNGG 4 cut(s) 60, 195, 722, 1100
MvaI CCWGG 3 cut(s) 60, 195, 722
MwoI GCNNNNNNNGC 2 cut(s) 665, 889
NciI CCSGG 1 cut(s) 1100
NdeII GATC 6 cut(s) 19, 97, 574, 954, 1003, 1147
NlaIII CATG 6 cut(s) 190, 380, 760, 925, 941, 1165
NlaIV GGNNCC 7 cut(s) 88, 199, 369, 489, 891, 1005, 1239
NmeAIII GCCGAG 1 cut(s) 706
NmuCI GTSAC 1 cut(s) 1246
NsiI ATGCAT 1 cut(s) 1276
NspI RCATGY 1 cut(s) 190
NspV TTCGAA 1 cut(s) 445
PagI TCATGA 1 cut(s) 1161
PasI CCCWGGG 1 cut(s) 59
PciSI GCTCTTC 1 cut(s) 612
PcsI WCGNNNNNNNCGW 3 cut(s) 234, 1112, 1256
PdmI GAANNNNTTC 1 cut(s) 1013
PfeI GAWTC 4 cut(s) 150, 694, 1021, 1171
PflMI CCANNNNNTGG 1 cut(s) 721
PinAI ACCGGT 1 cut(s) 329
PkrI GCNGC 5 cut(s) 382, 755, 885, 935, 946
PleI GAGTC 2 cut(s) 647, 1119
PpsI GAGTC 2 cut(s) 647, 1119
Ppu21I YACGTR 1 cut(s) 1081
Psp1406I AACGTT 1 cut(s) 1259
Psp6I CCWGG 3 cut(s) 58, 193, 720
PspEI GGTNACC 2 cut(s) 814, 980
PspFI CCCAGC 2 cut(s) 405, 519
PspGI CCWGG 3 cut(s) 58, 193, 720
PspN4I GGNNCC 7 cut(s) 88, 199, 369, 489, 891, 1005, 1239
PspOMI GGGCCC 1 cut(s) 86
PsuI RGATCY 3 cut(s) 574, 1003, 1147
RsaI GTAC 3 cut(s) 392, 902, 1079
RsaNI GTAC 3 cut(s) 391, 901, 1078
SapI GCTCTTC 1 cut(s) 612
SaqAI TTAA 1 cut(s) 795
SatI GCNGC 5 cut(s) 381, 754, 884, 934, 945
Sau3AI GATC 6 cut(s) 19, 97, 574, 954, 1003, 1147
ScaI AGTACT 1 cut(s) 392
SchI GAGTC 2 cut(s) 647, 1120
ScrFI CCNGG 4 cut(s) 60, 195, 722, 1100
SduI GDGCHC 3 cut(s) 78, 90, 1161
SexAI ACCWGGT 1 cut(s) 720
SfaNI GCATC 3 cut(s) 229, 931, 1283
SfcI CTRYAG 1 cut(s) 990
SfuI TTCGAA 1 cut(s) 445
SgrAI CRCCGGYG 2 cut(s) 329, 886
SinI GGWCC 7 cut(s) 180, 197, 373, 480, 488, 1089, 1238
SmlI CTYRAG 2 cut(s) 46, 386
SmoI CTYRAG 2 cut(s) 46, 386
SsiI CCGC 8 cut(s) 321, 340, 414, 657, 753, 789, 884, 931
SspMI CTAG 2 cut(s) 104, 542
StyD4I CCNGG 4 cut(s) 58, 193, 720, 1098
StyI CCWWGG 3 cut(s) 82, 121, 483
TaaI ACNGT 4 cut(s) 172, 592, 905, 1120
TaiI ACGT 6 cut(s) 225, 294, 1083, 1221, 1253, 1262
TaqI TCGA 8 cut(s) 22, 237, 279, 317, 357, 445, 570, 1017
TatI WGTACW 1 cut(s) 390
TauI GCSGC 2 cut(s) 756, 886
TfiI GAWTC 4 cut(s) 150, 694, 1021, 1171
Tru1I TTAA 1 cut(s) 795
Tru9I TTAA 1 cut(s) 795
TscAI CASTG 2 cut(s) 595, 1139
TseFI GTSAC 1 cut(s) 1246
TseI GCWGC 3 cut(s) 380, 933, 944
Tsp45I GTSAC 1 cut(s) 1246
TspDTI ATGAA 6 cut(s) 130, 773, 854, 879, 1178, 1198
TspRI CASTG 2 cut(s) 595, 1139
Van91I CCANNNNNTGG 1 cut(s) 721
VpaK11BI GGWCC 7 cut(s) 180, 197, 373, 480, 488, 1089, 1238
XceI RCATGY 1 cut(s) 190
XmnI GAANNNNTTC 1 cut(s) 1013
XspI CTAG 2 cut(s) 104, 542
ZrmI AGTACT 1 cut(s) 392
Zsp2I ATGCAT 1 cut(s) 1276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.