Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0000777

Physical Location & Seq

Genomic Coordinates Forward (+)

11522530 .. 11524085

Gene Structure 1556 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG095100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGTCATCTTCATCTTCTTCTGCTGTTCCCAAACCACAACCAAAGCTTCCACTAAAACGGATCCCCGGTGACTATGGCGCACCCTTCTTTGGTGCCATCAAGGATCGGTACGATTTTTTCTACAACCAAGGTCGCGACCAGTTCTTTAAAGCCCGGATCCAAAAGTACAACTCCACTGTGTTCCGTACAAACATGCCTCCTGGTCCCTTCATTGCTTCAAACCCGAAGGTCGTGACTGTCCTGGATGCCATAAGCTTTCCGATTCTCTTCGACAACTCCAAAGTCGAAAAACGTGACATCTTCGATGGCACTTACATGCCATCGACAGACTTCACCGGTGGCTATCGCATTTGCTCATTTCTTGACCCATCCGAAGCTAAACACACTTCTCTAAAAAATTTCTTCTTGTCTCTACTCTCAGCTAACCACAAGAATGTTATACCACTTTTCCATACCCACTTCACCGACCTATTTGTCAAAGCCGAGGCTCAGTTGTTAAAAGATGGAAAATCAGACTTTAACACACTGAATGACAAAACTTCCTTCGACTTCATCTTTGAGCTGTTTTTTGGGGAAAACCCATCGGACACAACTCTGGGGTCCAAAGGATCAACCTTGGTTACCCTTTGGCTCTTACCCCAACTTTCTCCTCAGCTCACACTAGGGTTGCCCAAGTTGTTCAATGTTTTCGAAGATTTCTTGCTTCACACGTTTCCCTTCCCTGCCCTTTTTGTTAAACCAGCTTATAACAAGGTATACAAGGCCTTTTACCAGTCTGCAGCTAAGGCCTTGGACGAGGCCGAGAGTAATTTCGGGATTTCAAGAGATGAAGCATGCCACAACCTCGTGTTCTTGGTGTGCTTCAATGCTTATGGTGGCATGAAGCTTTTGTTCCCTTCCTTGTTGAAATGGGTTGGATTAGCAGGAGAGGATTTACACGGCAAGCTCCGTGATGAAATCAGGACAGTTGTTAAAGAAGCTGGAGGTAAGATTACTCTTGCAGCTTTGGATAAGATGACACTAACCAAGTCAGTTGTTTATGAGGCCTTGAGGATTGATCCTTCAGTCCCATTCCAATACGGAAAGGCTAAGGAGGATCTAATAATCGAGAGCCATGACGCAGCATTTGAGATTAAAAAGGGAGAAATAATCTTCGGGTACCAGACCATTGCAACTAGGGATGGAAAGATTTTCAAGAACCCTGAGGAGTTTGTAGGTGACAGGTTTGTAGGGGAGGGCGAGAAGCTGCTGAAGTACGTGTGGTGGTCCAACGGCCCCGAGACGGTGAGTCCAGCCGCCGGGAACAAGCAGTGTGCCGGGAAGGATCTCGTGGTGCTCATGAACCGGATAATGTTAGTCGAGTTCTTCCTTCGTTATGACACTTTTACGCTCGACGTCGGAACGTTTTTGTTAGGACCGAAAGTGACGTTCAAGACTTTGACGCCAGCTTCATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0008150 GO:0008152 GO:0008202 GO:0016125 GO:0016491 GO:0044238 GO:0055114 GO:0071704 GO:1901360 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00592 ko01100 ko01110 map00592 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

485

Amino Acids

54.36

Weight (kDa)

8.38

Isoelectric Point (pI)

32.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	314 - 461	3.4e-16	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000777)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g07410 FvH4_2g07421 FvH4_2g07423 FvH4_5g16260
malus_domestica	MD10G1085800.v1.1
prunus_persica	Prupe.8G110100_v2.0.a1
pyrus_communis	pycom10g03730 pycom10g06740
rosa_chinensis	RchiOBHm_Chr6g0260901 RchiOBHm_Chr6g0260921 RchiOBHm_Chr6g0260931 RchiOBHm_Chr6g0260961 RchiOBHm_Chr6g0261011
rosa_laevigata	RLG00000014467 RLG00000014470 RLG00000014471 RLG00000014473 RLG00000014475 RLG00000014476 RLG00000014477 RLG00000014478 RLG00000018641 RLG00000022453
rosa_multiflora	Rmu_sc0003025.1_g000005 Rmu_sc0003337.1_g000004 Rmu_sc0003337.1_g000028 Rmu_sc0005816.1_g000002 Rmu_sc0005816.1_g000003 Rmu_sc0005816.1_g000011 Rmu_sc0005816.1_g000029 Rmu_sc0005980.1_g000002 Rmu_sc0009186.1_g000002
rosa_roxburghii	Rroxscaffold_2G00122160 Rroxscaffold_7G00207490 Rroxscaffold_7G00207500 Rroxscaffold_7G00207550 Rroxscaffold_7G00207560 Rroxscaffold_7G00207620
rosa_rugosa	Rorug02G0235500.1 Rorug05G0593300 Rorug05G0593300 Rorug05G0593400 Rorug05G0593500.1 Rorug05G0594400
rosa_samantha	Rh6AG112800 Rh6AG113000 Rh6AG113100 Rh6AG113300 Rh6AG113900 Rh6BG106900 Rh6BG107000 Rh6BG107200 Rh6BG107500 Rh6CG103900 Rh6CG104000 Rh6CG104300 Rh6CG104400 Rh6CG104600 Rh6DG094800 Rh6DG094900 Rh6DG095100 Rh6DG095200 Rh6DG095400
rosa_wichuraiana	Rw0G011910 Rw6G009600 Rw6G009610 Rw6G009620 Rw6G009630 Rw6G009670 Rw6G009710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	747
AasI	GACNNNNNNGTC	1 cut(s)	473
AatII	GACGTC	1 cut(s)	1398
Acc65I	GGTACC	1 cut(s)	1158
AccB1I	GGYRCC	2 cut(s)	92, 1158
AccI	GTMKAC	1 cut(s)	756
AccII	CGCG	1 cut(s)	135
AciI	CCGC	1 cut(s)	1296
AclI	AACGTT	1 cut(s)	1403
AclWI	GGATC	9 cut(s)	55, 68, 111, 151, 164, 616, 1052, 1104, 1332
AcsI	RAATTY	1 cut(s)	397
AcuI	CTGAAG	2 cut(s)	1047, 1271
AcyI	GRCGYC	2 cut(s)	1395, 1442
AfaI	GTAC	5 cut(s)	110, 167, 187, 1160, 1256
AfiI	CCNNNNNNNGG	3 cut(s)	89, 1282, 1298
AflIII	ACRYGT	2 cut(s)	708, 1257
AgeI	ACCGGT	1 cut(s)	335
AgsI	TTSAA	7 cut(s)	219, 682, 822, 865, 907, 1195, 1432
AhdI	GACNNNNNGTC	1 cut(s)	1287
AjnI	CCWGG	2 cut(s)	199, 240
Alw21I	GWGCWC	1 cut(s)	1338
Alw26I	GTCTC	2 cut(s)	414, 1274
AlwI	GGATC	9 cut(s)	55, 68, 111, 151, 164, 616, 1052, 1104, 1332
Ama87I	CYCGRG	1 cut(s)	1277
AoxI	GGCC	5 cut(s)	762, 786, 798, 1044, 1273
ApeKI	GCWGC	4 cut(s)	779, 1001, 1121, 1246
ApoI	RAATTY	1 cut(s)	397
ArsI	GACNNNNNNTTYG	4 cut(s)	539, 571, 1109, 1141
AsiGI	ACCGGT	1 cut(s)	335
Asp718I	GGTACC	1 cut(s)	1158
AspLEI	GCGC	1 cut(s)	80
AspS9I	GGNCC	5 cut(s)	203, 600, 1266, 1274, 1415
AsuC2I	CCSGG	4 cut(s)	66, 154, 1300, 1318
AsuHPI	GGTGA	5 cut(s)	80, 325, 454, 1229, 1297
AsuII	TTCGAA	1 cut(s)	690
AvaI	CYCGRG	1 cut(s)	1277
AvaII	GGWCC	4 cut(s)	203, 600, 1266, 1415
AxyI	CCTNAGG	1 cut(s)	1203
BamHI	GGATCC	2 cut(s)	60, 156
BanI	GGYRCC	2 cut(s)	92, 1158
BauI	CACGAG	2 cut(s)	845, 1328
Bbv12I	GWGCWC	1 cut(s)	1338
BbvCI	CCTCAGC	1 cut(s)	651
BbvI	GCAGC	4 cut(s)	791, 1013, 1133, 1233
BccI	CCATC	7 cut(s)	104, 299, 328, 376, 497, 589, 1175
BceAI	ACGGC	2 cut(s)	955, 1288
BciT130I	CCWGG	2 cut(s)	201, 242
BcnI	CCSGG	4 cut(s)	66, 154, 1300, 1318
BcoDI	GTCTC	2 cut(s)	414, 1274
BfaI	CTAG	2 cut(s)	662, 1176
BfmI	CTRYAG	1 cut(s)	777
BisI	GCNGC	5 cut(s)	780, 1002, 1122, 1247, 1296
BlsI	GCNGC	5 cut(s)	781, 1003, 1123, 1248, 1297
Bme1390I	CCNGG	6 cut(s)	66, 154, 201, 242, 1300, 1318
Bme18I	GGWCC	4 cut(s)	203, 600, 1266, 1415
BmeRI	GACNNNNNGTC	1 cut(s)	1287
BmeT110I	CYCGRG	1 cut(s)	1277
BmgT120I	GGNCC	5 cut(s)	203, 600, 1266, 1274, 1415
BmiI	GGNNCC	7 cut(s)	62, 94, 158, 205, 601, 1160, 1276
BmrFI	CCNGG	6 cut(s)	66, 154, 201, 242, 1300, 1318
BmsI	GCATC	1 cut(s)	235
BpmI	CTGGAG	1 cut(s)	1002
Bpu10I	CCTNAGC	3 cut(s)	651, 783, 1089
Bpu14I	TTCGAA	1 cut(s)	690
BpuEI	CTTGAG	1 cut(s)	1069
BpuMI	CCSGG	4 cut(s)	66, 154, 1300, 1318
BsaAI	YACGTR	1 cut(s)	1258
BsaHI	GRCGYC	2 cut(s)	1395, 1442
BsaJI	CCNNGG	5 cut(s)	64, 127, 483, 615, 789
BsaWI	WCCGGW	2 cut(s)	335, 1344
Bsc4I	CCNNNNNNNGG	3 cut(s)	89, 1282, 1298
Bse118I	RCCGGY	1 cut(s)	335
Bse1I	ACTGG	2 cut(s)	139, 772
Bse21I	CCTNAGG	1 cut(s)	1203
Bse3DI	GCAATG	2 cut(s)	210, 1167
BseBI	CCWGG	2 cut(s)	201, 242
BseDI	CCNNGG	5 cut(s)	64, 127, 483, 615, 789
BseGI	GGATG	4 cut(s)	250, 368, 1186, 1451
BseLI	CCNNNNNNNGG	3 cut(s)	89, 1282, 1298
BseMI	GCAATG	2 cut(s)	210, 1167
BseMII	CTCAG	4 cut(s)	432, 503, 665, 1194
BseNI	ACTGG	2 cut(s)	139, 772
BseRI	GAGGAG	2 cut(s)	639, 1220
BseXI	GCAGC	4 cut(s)	791, 1013, 1133, 1233
Bsh1236I	CGCG	1 cut(s)	135
BshFI	GGCC	5 cut(s)	764, 788, 800, 1046, 1275
BshNI	GGYRCC	2 cut(s)	92, 1158
BshTI	ACCGGT	1 cut(s)	335
BsiHKAI	GWGCWC	1 cut(s)	1338
BsiHKCI	CYCGRG	1 cut(s)	1277
BsiSI	CCGG	6 cut(s)	66, 154, 336, 1299, 1317, 1345
BslFI	GGGAC	2 cut(s)	189, 1052
BslI	CCNNNNNNNGG	3 cut(s)	89, 1282, 1298
BsmAI	GTCTC	2 cut(s)	414, 1274
BsmBI	CGTCTC	1 cut(s)	1274
BsmFI	GGGAC	2 cut(s)	189, 1052
BsnI	GGCC	5 cut(s)	764, 788, 800, 1046, 1275
BsoBI	CYCGRG	1 cut(s)	1277
Bsp119I	TTCGAA	1 cut(s)	690
Bsp1286I	GDGCHC	1 cut(s)	1338
Bsp143I	GATC	7 cut(s)	60, 103, 156, 608, 1057, 1096, 1324
Bsp68I	TCGCGA	1 cut(s)	135
BspACI	CCGC	1 cut(s)	1296
BspANI	GGCC	5 cut(s)	764, 788, 800, 1046, 1275
BspCNI	CTCAG	4 cut(s)	431, 502, 664, 1195
BspFNI	CGCG	1 cut(s)	135
BspHI	TCATGA	1 cut(s)	1338
BspLI	GGNNCC	7 cut(s)	62, 94, 158, 205, 601, 1160, 1276
BspMAI	CTGCAG	1 cut(s)	781
BspPI	GGATC	9 cut(s)	55, 68, 111, 151, 164, 616, 1052, 1104, 1332
BspT104I	TTCGAA	1 cut(s)	690
BspT107I	GGYRCC	2 cut(s)	92, 1158
BsrDI	GCAATG	2 cut(s)	210, 1167
BsrFI	RCCGGY	1 cut(s)	335
BsrI	ACTGG	2 cut(s)	139, 772
BssAI	RCCGGY	1 cut(s)	335
BssECI	CCNNGG	5 cut(s)	64, 127, 483, 615, 789
BssMI	GATC	7 cut(s)	60, 103, 156, 608, 1057, 1096, 1324
BssNAI	GTATAC	1 cut(s)	757
BssNI	GRCGYC	2 cut(s)	1395, 1442
BssSI	CACGAG	2 cut(s)	845, 1328
BssT1I	CCWWGG	3 cut(s)	127, 615, 789
Bst1107I	GTATAC	1 cut(s)	757
Bst2BI	CACGAG	2 cut(s)	845, 1328
Bst2UI	CCWGG	2 cut(s)	201, 242
Bst4CI	ACNGT	4 cut(s)	178, 238, 967, 1285
Bst6I	CTCTTC	1 cut(s)	272
BstACI	GRCGYC	2 cut(s)	1395, 1442
BstBAI	YACGTR	1 cut(s)	1258
BstBI	TTCGAA	1 cut(s)	690
BstC8I	GCNNGC	3 cut(s)	835, 944, 1446
BstDEI	CTNAG	6 cut(s)	418, 489, 651, 783, 1089, 1203
BstEII	GGTNACC	1 cut(s)	619
BstF5I	GGATG	4 cut(s)	250, 368, 1186, 1451
BstFNI	CGCG	1 cut(s)	135
BstHHI	GCGC	1 cut(s)	80
BstKTI	GATC	7 cut(s)	63, 106, 159, 611, 1060, 1099, 1327
BstMAI	GTCTC	2 cut(s)	414, 1274
BstMBI	GATC	7 cut(s)	60, 103, 156, 608, 1057, 1096, 1324
BstMWI	GCNNNNNNNGC	1 cut(s)	785
BstNI	CCWGG	2 cut(s)	201, 242
BstNSI	RCATGY	3 cut(s)	196, 319, 837
BstPI	GGTNACC	1 cut(s)	619
BstSCI	CCNGG	6 cut(s)	64, 152, 199, 240, 1298, 1316
BstSFI	CTRYAG	1 cut(s)	777
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	4 cut(s)	791, 1013, 1133, 1233
BstX2I	RGATCY	4 cut(s)	60, 156, 1096, 1324
BstYI	RGATCY	4 cut(s)	60, 156, 1096, 1324
BstZ17I	GTATAC	1 cut(s)	757
Bsu36I	CCTNAGG	1 cut(s)	1203
BsuRI	GGCC	5 cut(s)	764, 788, 800, 1046, 1275
BtsCI	GGATG	4 cut(s)	250, 368, 1186, 1451
BtsI	GCAGTG	1 cut(s)	1316
BtsIMutI	CAGTG	3 cut(s)	174, 524, 1316
BtuMI	TCGCGA	1 cut(s)	135
Cac8I	GCNNGC	3 cut(s)	835, 944, 1446
CciI	TCATGA	1 cut(s)	1338
CfoI	GCGC	1 cut(s)	80
Cfr10I	RCCGGY	1 cut(s)	335
Cfr13I	GGNCC	5 cut(s)	203, 600, 1266, 1274, 1415
CseI	GACGC	2 cut(s)	1127, 1450
Csp6I	GTAC	5 cut(s)	109, 166, 186, 1159, 1255
CspAI	ACCGGT	1 cut(s)	335
CviAII	CATG	6 cut(s)	193, 316, 834, 880, 1115, 1339
CviQI	GTAC	5 cut(s)	109, 166, 186, 1159, 1255
DdeI	CTNAG	6 cut(s)	418, 489, 651, 783, 1089, 1203
DpnI	GATC	7 cut(s)	62, 105, 158, 610, 1059, 1098, 1326
DpnII	GATC	7 cut(s)	60, 103, 156, 608, 1057, 1096, 1324
DraI	TTTAAA	1 cut(s)	148
DrdI	GACNNNNNNGTC	1 cut(s)	473
DriI	GACNNNNNGTC	1 cut(s)	1287
DseDI	GACNNNNNNGTC	1 cut(s)	473
Eam1104I	CTCTTC	1 cut(s)	272
Eam1105I	GACNNNNNGTC	1 cut(s)	1287
EarI	CTCTTC	1 cut(s)	272
Eco130I	CCWWGG	3 cut(s)	127, 615, 789
Eco147I	AGGCCT	3 cut(s)	764, 788, 1046
Eco47I	GGWCC	4 cut(s)	203, 600, 1266, 1415
Eco57I	CTGAAG	2 cut(s)	1047, 1271
Eco81I	CCTNAGG	1 cut(s)	1203
Eco88I	CYCGRG	1 cut(s)	1277
Eco91I	GGTNACC	1 cut(s)	619
EcoO65I	GGTNACC	1 cut(s)	619
EcoRII	CCWGG	2 cut(s)	199, 240
EcoT14I	CCWWGG	3 cut(s)	127, 615, 789
ErhI	CCWWGG	3 cut(s)	127, 615, 789
Esp3I	CGTCTC	1 cut(s)	1274
FaeI	CATG	6 cut(s)	196, 319, 837, 883, 1118, 1342
FaqI	GGGAC	2 cut(s)	189, 1052
FatI	CATG	6 cut(s)	192, 315, 833, 879, 1114, 1338
FblI	GTMKAC	1 cut(s)	756
Fnu4HI	GCNGC	5 cut(s)	780, 1002, 1122, 1247, 1296
FokI	GGATG	4 cut(s)	257, 355, 1193, 1438
Fsp4HI	GCNGC	5 cut(s)	780, 1002, 1122, 1247, 1296
FspBI	CTAG	2 cut(s)	662, 1176
GlaI	GCGC	1 cut(s)	79
GluI	GCNGC	5 cut(s)	780, 1002, 1122, 1247, 1296
GsuI	CTGGAG	1 cut(s)	1002
HaeIII	GGCC	5 cut(s)	764, 788, 800, 1046, 1275
HapII	CCGG	6 cut(s)	66, 154, 336, 1299, 1317, 1345
HgaI	GACGC	2 cut(s)	1127, 1450
HhaI	GCGC	1 cut(s)	80
Hin1I	GRCGYC	2 cut(s)	1395, 1442
Hin1II	CATG	6 cut(s)	196, 319, 837, 883, 1118, 1342
Hin6I	GCGC	1 cut(s)	78
HinP1I	GCGC	1 cut(s)	78
HindIII	AAGCTT	3 cut(s)	44, 253, 884
HinfI	GANTC	2 cut(s)	262, 1288
HpaII	CCGG	6 cut(s)	66, 154, 336, 1299, 1317, 1345
HphI	GGTGA	5 cut(s)	80, 325, 454, 1229, 1297
Hpy166II	GTNNAC	1 cut(s)	757
Hpy188I	TCNGA	5 cut(s)	261, 373, 514, 586, 1400
Hpy8I	GTNNAC	1 cut(s)	757
Hpy99I	CGWCG	2 cut(s)	1397, 1400
HpyAV	CCTTC	9 cut(s)	94, 217, 220, 553, 727, 906, 1071, 1315, 1379
HpyCH4III	ACNGT	4 cut(s)	178, 238, 967, 1285
HpyCH4IV	ACGT	6 cut(s)	292, 710, 1257, 1395, 1403, 1427
HpyCH4V	TGCA	3 cut(s)	779, 1001, 1172
HpyF10VI	GCNNNNNNNGC	1 cut(s)	785
HpyF3I	CTNAG	6 cut(s)	418, 489, 651, 783, 1089, 1203
HpySE526I	ACGT	6 cut(s)	292, 710, 1257, 1395, 1403, 1427
Hsp92I	GRCGYC	2 cut(s)	1395, 1442
Hsp92II	CATG	6 cut(s)	196, 319, 837, 883, 1118, 1342
HspAI	GCGC	1 cut(s)	78
KpnI	GGTACC	1 cut(s)	1162
Kzo9I	GATC	7 cut(s)	60, 103, 156, 608, 1057, 1096, 1324
LmnI	GCTCC	1 cut(s)	951
Lsp1109I	GCAGC	4 cut(s)	791, 1013, 1133, 1233
LweI	GCATC	1 cut(s)	235
MaeI	CTAG	2 cut(s)	662, 1176
MaeII	ACGT	6 cut(s)	292, 710, 1257, 1395, 1403, 1427
MaeIII	GTNAC	6 cut(s)	68, 232, 293, 619, 1217, 1423
MalI	GATC	7 cut(s)	62, 105, 158, 610, 1059, 1098, 1326
MboI	GATC	7 cut(s)	60, 103, 156, 608, 1057, 1096, 1324
MboII	GAAGA	8 cut(s)	6, 9, 259, 292, 394, 704, 1144, 1357
MflI	RGATCY	4 cut(s)	60, 156, 1096, 1324
MhlI	GDGCHC	1 cut(s)	1338
MluCI	AATT	2 cut(s)	397, 808
MlyI	GAGTC	1 cut(s)	1297
MmeI	TCCRAC	3 cut(s)	895, 1293, 1378
MseI	TTAA	6 cut(s)	147, 497, 519, 735, 972, 1134
MslI	CAYNNNNRTG	2 cut(s)	314, 432
MspI	CCGG	6 cut(s)	66, 154, 336, 1299, 1317, 1345
MspR9I	CCNGG	6 cut(s)	66, 154, 201, 242, 1300, 1318
MvaI	CCWGG	2 cut(s)	201, 242
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	1 cut(s)	785
NciI	CCSGG	4 cut(s)	66, 154, 1300, 1318
NdeII	GATC	7 cut(s)	60, 103, 156, 608, 1057, 1096, 1324
NlaIII	CATG	6 cut(s)	196, 319, 837, 883, 1118, 1342
NlaIV	GGNNCC	7 cut(s)	62, 94, 158, 205, 601, 1160, 1276
NmeAIII	GCCGAG	2 cut(s)	508, 826
NmuCI	GTSAC	5 cut(s)	68, 232, 293, 1217, 1423
NruI	TCGCGA	1 cut(s)	135
NspI	RCATGY	3 cut(s)	196, 319, 837
NspV	TTCGAA	1 cut(s)	690
PaeI	GCATGC	1 cut(s)	837
PagI	TCATGA	1 cut(s)	1338
PceI	AGGCCT	3 cut(s)	764, 788, 1046
PfeI	GAWTC	1 cut(s)	262
PfoI	TCCNGGA	1 cut(s)	240
PinAI	ACCGGT	1 cut(s)	335
PkrI	GCNGC	5 cut(s)	781, 1003, 1123, 1248, 1297
PleI	GAGTC	1 cut(s)	1296
PpsI	GAGTC	1 cut(s)	1296
Ppu21I	YACGTR	1 cut(s)	1258
PsiI	TTATAA	1 cut(s)	747
Psp1406I	AACGTT	1 cut(s)	1403
Psp6I	CCWGG	2 cut(s)	199, 240
PspEI	GGTNACC	1 cut(s)	619
PspGI	CCWGG	2 cut(s)	199, 240
PspN4I	GGNNCC	7 cut(s)	62, 94, 158, 205, 601, 1160, 1276
PspPI	GGNCC	5 cut(s)	203, 600, 1266, 1274, 1415
PstI	CTGCAG	1 cut(s)	781
PsuI	RGATCY	4 cut(s)	60, 156, 1096, 1324
RruI	TCGCGA	1 cut(s)	135
RsaI	GTAC	5 cut(s)	110, 167, 187, 1160, 1256
RsaNI	GTAC	5 cut(s)	109, 166, 186, 1159, 1255
RseI	CAYNNNNRTG	2 cut(s)	314, 432
SaqAI	TTAA	6 cut(s)	147, 497, 519, 735, 972, 1134
SatI	GCNGC	5 cut(s)	780, 1002, 1122, 1247, 1296
Sau3AI	GATC	7 cut(s)	60, 103, 156, 608, 1057, 1096, 1324
Sau96I	GGNCC	5 cut(s)	203, 600, 1266, 1274, 1415
SchI	GAGTC	1 cut(s)	1297
ScrFI	CCNGG	6 cut(s)	66, 154, 201, 242, 1300, 1318
SduI	GDGCHC	1 cut(s)	1338
SfaNI	GCATC	1 cut(s)	235
SfcI	CTRYAG	1 cut(s)	777
SfuI	TTCGAA	1 cut(s)	690
SgrAI	CRCCGGYG	1 cut(s)	335
SinI	GGWCC	4 cut(s)	203, 600, 1266, 1415
SmiMI	CAYNNNNRTG	2 cut(s)	314, 432
SmlI	CTYRAG	1 cut(s)	1048
SmoI	CTYRAG	1 cut(s)	1048
SphI	GCATGC	1 cut(s)	837
Sse9I	AATT	2 cut(s)	397, 808
SseBI	AGGCCT	3 cut(s)	764, 788, 1046
SsiI	CCGC	1 cut(s)	1296
SspMI	CTAG	2 cut(s)	662, 1176
StuI	AGGCCT	3 cut(s)	764, 788, 1046
StyD4I	CCNGG	6 cut(s)	64, 152, 199, 240, 1298, 1316
StyI	CCWWGG	3 cut(s)	127, 615, 789
TaaI	ACNGT	4 cut(s)	178, 238, 967, 1285
TaiI	ACGT	6 cut(s)	295, 713, 1260, 1398, 1406, 1430
TaqI	TCGA	9 cut(s)	270, 285, 303, 323, 546, 690, 1107, 1359, 1392
TaqII	GACCGA	1 cut(s)	1432
TasI	AATT	2 cut(s)	397, 808
TatI	WGTACW	1 cut(s)	165
TauI	GCSGC	1 cut(s)	1298
TfiI	GAWTC	1 cut(s)	262
Tru1I	TTAA	6 cut(s)	147, 497, 519, 735, 972, 1134
Tru9I	TTAA	6 cut(s)	147, 497, 519, 735, 972, 1134
TscAI	CASTG	3 cut(s)	181, 531, 1316
TseFI	GTSAC	5 cut(s)	68, 232, 293, 1217, 1423
TseI	GCWGC	4 cut(s)	779, 1001, 1121, 1246
Tsp45I	GTSAC	5 cut(s)	68, 232, 293, 1217, 1423
TspDTI	ATGAA	7 cut(s)	199, 541, 843, 896, 969, 1355, 1440
TspGWI	ACGGA	4 cut(s)	73, 173, 938, 1095
TspRI	CASTG	3 cut(s)	181, 531, 1316
VpaK11BI	GGWCC	4 cut(s)	203, 600, 1266, 1415
XapI	RAATTY	1 cut(s)	397
XceI	RCATGY	3 cut(s)	196, 319, 837
XmiI	GTMKAC	1 cut(s)	756
XspI	CTAG	2 cut(s)	662, 1176
ZraI	GACGTC	1 cut(s)	1396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.