Rw6G009600

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
16126521 .. 16127968
1448 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G009600.1

Sequence Viewer

Length: 1419 bp
ATGGCTTCATCATCTTCTTCTGATAACAAACCAAACCTTCCTCTGAAAAAAATTCCTGGTGACTATGGCTTGCCCTTGTTTGGCCCAATCAAAGATCGTTACGACTTTTTTTACAACCAAGGCAGAGACGACTTCTTCAAAACCCGAATGGCAAAGTACAAGTCCACAGTTTTCCGAACCAACATGCCTCCCGGTCCCTTCATTGCCTCGAATCCAAAGGTTGTCGTAGTTCTTGACGCCAAAAGCTTTCCTATCCTCTTCGACAATTCGAGAGTAGAAAAACGTAACATATTTGATGGCACTTACATGCCTTCCACTTCCTTCACCGGTGGCTATCGCATTTGCTCTTTTCTCGATCCTTCGGAACCCAAACACACTTCTCTCAAAAACTTCTTCTTGTCTCTACTCTCTGCTAGCCACAACAATGTTATCCCACTTTTCCAAACTCACTTCTCCGACCTCTTTGTCAAGGCTGAAGCTCAACTGGCCAAAGATGACAAATCGGACTTCAACTCACTCAATGACCAAACTTCTTTCAACTTCATCTTTGAGCTGTTCTTCGGTCAAAACCCGTCAAGCACACCATTGGGATCCAAAGGCGCAACCCTGGTCACACTCTGGCTCTTACCCCAGCTCACTCCTCAGATAACACTGGGATTGCCCAAGTTGCTGAACGTTCTAGAAGATTTCTTGCTGCACACGTTTCCCTTTCCCGCCCTTCTTGTCAAACCCGCTTATAACAAGCTCTACAAGGCTTTTTATGAGTCCGCAGCCAAGGCTTTGGAAGAGGCTGAGGGTACTTTTGGGATTTCAAAAGACGAAGCTTGCCACAACCTGATCTTCATGGTGTGCTTCAATGCTTATGGTGGCATGAAGCTCTTATTCCCTATTTTGCTGAAGTGGGTCTCTCCGAGAGAAATAAGGGCCGCTGTTAAAGATGCTGGAGGTAAGGTTACTCTTGCAGCGTTGGATAAGATGACATTGACCAAGTCGGTGGTTTATGAAGCTCTGAGGATTGATCCTGCGGTCCCGTTCCAGTATGCGAAGGCCAAGGAGGATCTGATAATCAACAGCCACGATGCCAGTTTTCAGATCAAGAAGGGAGAAGTGATCTTCGGATATCAGACCATTGCCACTAGAGATCCAAAGATCTTCGAGAGGCCTGAGGAGTTTGTAGGAGATAGGTTTGTTGGGAATGGAGAGAAGCTATTGAAGTACGTGTGGTGGTCCAACGGCCCGGAGACGGAGAACCCAACGGCCGCGAATAAGATTTGCGCGGGGAAGGACCTGGTTGTGCTGATGAACAGGATAATGTTGGTCGAGTTCTTCCTTCGTTATGACACTTTTACTGCCGATATTGGCACGTTTTTGTTGGGACCAAAAGTGACGTTTAAAACCTTGACCAAGGCTTCGTCATGA

Protein Analysis

472

Amino Acids

52.95

Weight (kDa)

8.92

Isoelectric Point (pI)

31.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 306 - 400 6e-13 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 738
AasI GACNNNNNNGTC 1 cut(s) 464
AccII CGCG 2 cut(s) 1262, 1277
AciI CCGC 7 cut(s) 714, 732, 768, 927, 1025, 1260, 1277
AclI AACGTT 1 cut(s) 675
AclWI GGATC 6 cut(s) 350, 585, 598, 1013, 1065, 1136
AcoI YGGCCR 2 cut(s) 486, 1257
AcsI RAATTY 1 cut(s) 51
AcuI CTGAAG 2 cut(s) 495, 917
AcyI GRCGYC 1 cut(s) 237
AfaI GTAC 3 cut(s) 158, 799, 1217
AfiI CCNNNNNNNGG 2 cut(s) 80, 1243
AflIII ACRYGT 2 cut(s) 699, 1218
AgeI ACCGGT 1 cut(s) 326
AgsI TTSAA 6 cut(s) 139, 511, 538, 813, 856, 1213
AjnI CCWGG 3 cut(s) 55, 606, 1287
AluBI AGCT 9 cut(s) 246, 479, 553, 634, 745, 824, 877, 1007, 1207
AluI AGCT 9 cut(s) 246, 479, 553, 634, 745, 824, 877, 1007, 1207
Alw26I GTCTC 4 cut(s) 120, 405, 910, 1235
AlwI GGATC 6 cut(s) 350, 585, 598, 1013, 1065, 1136
AoxI GGCC 7 cut(s) 82, 486, 924, 1047, 1160, 1234, 1257
ApeKI GCWGC 3 cut(s) 694, 770, 962
ApoI RAATTY 1 cut(s) 51
ArsI GACNNNNNNTTYG 3 cut(s) 146, 178, 1393
AsiGI ACCGGT 1 cut(s) 326
AspLEI GCGC 2 cut(s) 602, 1277
AspS9I GGNCC 8 cut(s) 83, 194, 924, 1027, 1227, 1235, 1285, 1376
AsuC2I CCSGG 2 cut(s) 192, 1238
AsuHPI GGTGA 2 cut(s) 71, 316
AsuNHI GCTAGC 1 cut(s) 413
AvaII GGWCC 5 cut(s) 194, 1027, 1227, 1285, 1376
AxyI CCTNAGG 1 cut(s) 1164
BalI TGGCCA 1 cut(s) 488
BamHI GGATCC 1 cut(s) 590
BbvCI CCTCAGC 1 cut(s) 792
BbvI GCAGC 3 cut(s) 681, 782, 974
BccI CCATC 1 cut(s) 290
BceAI ACGGC 2 cut(s) 1249, 1272
BciT130I CCWGG 3 cut(s) 57, 608, 1289
BcnI CCSGG 2 cut(s) 192, 1238
BcoDI GTCTC 4 cut(s) 120, 405, 910, 1235
BfaI CTAG 3 cut(s) 414, 680, 1137
BglII AGATCT 1 cut(s) 1149
BisI GCNGC 5 cut(s) 695, 771, 927, 963, 1260
BlsI GCNGC 5 cut(s) 696, 772, 928, 964, 1261
Bme1390I CCNGG 5 cut(s) 57, 192, 608, 1238, 1289
Bme18I GGWCC 5 cut(s) 194, 1027, 1227, 1285, 1376
BmgT120I GGNCC 8 cut(s) 83, 194, 924, 1027, 1227, 1235, 1285, 1376
BmiI GGNNCC 5 cut(s) 196, 366, 592, 1029, 1377
BmrFI CCNGG 5 cut(s) 57, 192, 608, 1238, 1289
BmrI ACTGGG 1 cut(s) 662
BmsI GCATC 2 cut(s) 928, 1069
BmtI GCTAGC 1 cut(s) 417
BmuI ACTGGG 1 cut(s) 662
BpmI CTGGAG 1 cut(s) 963
Bpu10I CCTNAGC 1 cut(s) 792
BpuMI CCSGG 2 cut(s) 192, 1238
BsaAI YACGTR 1 cut(s) 1219
BsaHI GRCGYC 1 cut(s) 237
BsaI GGTCTC 1 cut(s) 910
BsaJI CCNNGG 5 cut(s) 118, 606, 774, 1050, 1404
BsaWI WCCGGW 1 cut(s) 326
BsaXI ACNNNNNCTCC 2 cut(s) 936, 966
Bsc4I CCNNNNNNNGG 2 cut(s) 80, 1243
Bse118I RCCGGY 1 cut(s) 326
Bse1I ACTGG 4 cut(s) 489, 657, 1036, 1083
Bse21I CCTNAGG 1 cut(s) 1164
Bse3DI GCAATG 2 cut(s) 201, 1128
BseBI CCWGG 3 cut(s) 57, 608, 1289
BseDI CCNNGG 5 cut(s) 118, 606, 774, 1050, 1404
BseLI CCNNNNNNNGG 2 cut(s) 80, 1243
BseMI GCAATG 2 cut(s) 201, 1128
BseMII CTCAG 4 cut(s) 656, 783, 1001, 1155
BseNI ACTGG 4 cut(s) 489, 657, 1036, 1083
BseRI GAGGAG 2 cut(s) 630, 1181
BseX3I CGGCCG 1 cut(s) 1257
BseXI GCAGC 3 cut(s) 681, 782, 974
BseYI CCCAGC 1 cut(s) 630
BsgI GTGCAG 1 cut(s) 680
Bsh1236I CGCG 2 cut(s) 1262, 1277
Bsh1285I CGRYCG 1 cut(s) 1260
BshFI GGCC 7 cut(s) 84, 488, 926, 1049, 1162, 1236, 1259
BshTI ACCGGT 1 cut(s) 326
BsiEI CGRYCG 1 cut(s) 1260
BsiSI CCGG 3 cut(s) 192, 327, 1238
BslFI GGGAC 3 cut(s) 180, 1013, 1389
BslI CCNNNNNNNGG 2 cut(s) 80, 1243
BsmAI GTCTC 4 cut(s) 120, 405, 910, 1235
BsmBI CGTCTC 2 cut(s) 120, 1235
BsmFI GGGAC 3 cut(s) 180, 1013, 1389
BsnI GGCC 7 cut(s) 84, 488, 926, 1049, 1162, 1236, 1259
Bso31I GGTCTC 1 cut(s) 910
BspACI CCGC 7 cut(s) 714, 732, 768, 927, 1025, 1260, 1277
BspANI GGCC 7 cut(s) 84, 488, 926, 1049, 1162, 1236, 1259
BspCNI CTCAG 4 cut(s) 655, 784, 1002, 1156
BspFNI CGCG 2 cut(s) 1262, 1277
BspHI TCATGA 1 cut(s) 1415
BspLI GGNNCC 5 cut(s) 196, 366, 592, 1029, 1377
BspOI GCTAGC 1 cut(s) 417
BspPI GGATC 6 cut(s) 350, 585, 598, 1013, 1065, 1136
BspTNI GGTCTC 1 cut(s) 910
BsrDI GCAATG 2 cut(s) 201, 1128
BsrFI RCCGGY 1 cut(s) 326
BsrI ACTGG 4 cut(s) 489, 657, 1036, 1083
BssAI RCCGGY 1 cut(s) 326
BssECI CCNNGG 5 cut(s) 118, 606, 774, 1050, 1404
BssNI GRCGYC 1 cut(s) 237
BssT1I CCWWGG 4 cut(s) 118, 774, 1050, 1404
Bst2UI CCWGG 3 cut(s) 57, 608, 1289
Bst4CI ACNGT 1 cut(s) 169
Bst6I CTCTTC 2 cut(s) 263, 780
BstACI GRCGYC 1 cut(s) 237
BstBAI YACGTR 1 cut(s) 1219
BstC8I GCNNGC 3 cut(s) 71, 415, 826
BstDEI CTNAG 4 cut(s) 642, 792, 1010, 1164
BstFNI CGCG 2 cut(s) 1262, 1277
BstHHI GCGC 2 cut(s) 602, 1277
BstMAI GTCTC 4 cut(s) 120, 405, 910, 1235
BstMCI CGRYCG 1 cut(s) 1260
BstMWI GCNNNNNNNGC 3 cut(s) 485, 667, 776
BstNI CCWGG 3 cut(s) 57, 608, 1289
BstNSI RCATGY 2 cut(s) 187, 310
BstSCI CCNGG 5 cut(s) 55, 190, 606, 1236, 1287
BstUI CGCG 2 cut(s) 1262, 1277
BstV1I GCAGC 3 cut(s) 681, 782, 974
BstX2I RGATCY 4 cut(s) 590, 1057, 1141, 1149
BstXI CCANNNNNNTGG 2 cut(s) 781, 994
BstYI RGATCY 4 cut(s) 590, 1057, 1141, 1149
BstZI CGGCCG 1 cut(s) 1257
Bsu36I CCTNAGG 1 cut(s) 1164
BsuRI GGCC 7 cut(s) 84, 488, 926, 1049, 1162, 1236, 1259
BtsIMutI CAGTG 1 cut(s) 650
Cac8I GCNNGC 3 cut(s) 71, 415, 826
CciI TCATGA 1 cut(s) 1415
CfoI GCGC 2 cut(s) 602, 1277
Cfr10I RCCGGY 1 cut(s) 326
Cfr13I GGNCC 8 cut(s) 83, 194, 924, 1027, 1227, 1235, 1285, 1376
CseI GACGC 1 cut(s) 245
CsiI ACCWGGT 1 cut(s) 1287
Csp6I GTAC 3 cut(s) 157, 798, 1216
CspAI ACCGGT 1 cut(s) 326
CviAII CATG 5 cut(s) 184, 307, 844, 871, 1416
CviQI GTAC 3 cut(s) 157, 798, 1216
DdeI CTNAG 4 cut(s) 642, 792, 1010, 1164
DraI TTTAAA 1 cut(s) 1393
DrdI GACNNNNNNGTC 1 cut(s) 464
DseDI GACNNNNNNGTC 1 cut(s) 464
EaeI YGGCCR 2 cut(s) 486, 1257
EagI CGGCCG 1 cut(s) 1257
Eam1104I CTCTTC 2 cut(s) 263, 780
EarI CTCTTC 2 cut(s) 263, 780
EclXI CGGCCG 1 cut(s) 1257
Eco130I CCWWGG 4 cut(s) 118, 774, 1050, 1404
Eco147I AGGCCT 1 cut(s) 1162
Eco31I GGTCTC 1 cut(s) 910
Eco32I GATATC 1 cut(s) 1121
Eco47I GGWCC 5 cut(s) 194, 1027, 1227, 1285, 1376
Eco52I CGGCCG 1 cut(s) 1257
Eco57I CTGAAG 2 cut(s) 495, 917
Eco81I CCTNAGG 1 cut(s) 1164
EcoO109I RGGNCCY 1 cut(s) 1285
EcoRII CCWGG 3 cut(s) 55, 606, 1287
EcoRV GATATC 1 cut(s) 1121
EcoT14I CCWWGG 4 cut(s) 118, 774, 1050, 1404
ErhI CCWWGG 4 cut(s) 118, 774, 1050, 1404
Esp3I CGTCTC 2 cut(s) 120, 1235
FaeI CATG 5 cut(s) 187, 310, 847, 874, 1419
FaqI GGGAC 3 cut(s) 180, 1013, 1389
FatI CATG 5 cut(s) 183, 306, 843, 870, 1415
FauI CCCGC 3 cut(s) 721, 739, 1270
Fnu4HI GCNGC 5 cut(s) 695, 771, 927, 963, 1260
Fsp4HI GCNGC 5 cut(s) 695, 771, 927, 963, 1260
FspBI CTAG 3 cut(s) 414, 680, 1137
GlaI GCGC 2 cut(s) 601, 1276
GluI GCNGC 5 cut(s) 695, 771, 927, 963, 1260
GsaI CCCAGC 1 cut(s) 634
GsuI CTGGAG 1 cut(s) 963
HaeIII GGCC 7 cut(s) 84, 488, 926, 1049, 1162, 1236, 1259
HapII CCGG 3 cut(s) 192, 327, 1238
HgaI GACGC 1 cut(s) 245
HhaI GCGC 2 cut(s) 602, 1277
Hin1I GRCGYC 1 cut(s) 237
Hin1II CATG 5 cut(s) 187, 310, 847, 874, 1419
Hin6I GCGC 2 cut(s) 600, 1275
HinP1I GCGC 2 cut(s) 600, 1275
HindIII AAGCTT 2 cut(s) 244, 822
HinfI GANTC 2 cut(s) 211, 764
HpaII CCGG 3 cut(s) 192, 327, 1238
HphI GGTGA 2 cut(s) 71, 316
Hpy166II GTNNAC 1 cut(s) 165
Hpy188III TCNNGA 7 cut(s) 233, 270, 353, 680, 1096, 1156, 1416
Hpy8I GTNNAC 1 cut(s) 165
HpyCH4III ACNGT 1 cut(s) 169
HpyCH4IV ACGT 6 cut(s) 283, 675, 701, 1218, 1364, 1388
HpyCH4V TGCA 2 cut(s) 697, 962
HpyF10VI GCNNNNNNNGC 3 cut(s) 485, 667, 776
HpyF3I CTNAG 4 cut(s) 642, 792, 1010, 1164
HpySE526I ACGT 6 cut(s) 283, 675, 701, 1218, 1364, 1388
Hsp92I GRCGYC 1 cut(s) 237
Hsp92II CATG 5 cut(s) 187, 310, 847, 874, 1419
HspAI GCGC 2 cut(s) 600, 1275
Lsp1109I GCAGC 3 cut(s) 681, 782, 974
LweI GCATC 2 cut(s) 928, 1069
MabI ACCWGGT 1 cut(s) 1287
MaeI CTAG 3 cut(s) 414, 680, 1137
MaeII ACGT 6 cut(s) 283, 675, 701, 1218, 1364, 1388
MaeIII GTNAC 6 cut(s) 59, 98, 284, 610, 952, 1384
MflI RGATCY 4 cut(s) 590, 1057, 1141, 1149
MlsI TGGCCA 1 cut(s) 488
MluCI AATT 2 cut(s) 51, 265
MluNI TGGCCA 1 cut(s) 488
MlyI GAGTC 1 cut(s) 773
MmeI TCCRAC 3 cut(s) 480, 948, 1254
Mox20I TGGCCA 1 cut(s) 488
MscI TGGCCA 1 cut(s) 488
MseI TTAA 2 cut(s) 933, 1392
MslI CAYNNNNRTG 2 cut(s) 305, 423
Msp20I TGGCCA 1 cut(s) 488
MspA1I CMGCKG 1 cut(s) 929
MspI CCGG 3 cut(s) 192, 327, 1238
MspR9I CCNGG 5 cut(s) 57, 192, 608, 1238, 1289
MvaI CCWGG 3 cut(s) 57, 608, 1289
MvnI CGCG 2 cut(s) 1262, 1277
MwoI GCNNNNNNNGC 3 cut(s) 485, 667, 776
NciI CCSGG 2 cut(s) 192, 1238
NheI GCTAGC 1 cut(s) 413
NlaIII CATG 5 cut(s) 187, 310, 847, 874, 1419
NlaIV GGNNCC 5 cut(s) 196, 366, 592, 1029, 1377
NmuCI GTSAC 3 cut(s) 59, 610, 1384
NspI RCATGY 2 cut(s) 187, 310
PagI TCATGA 1 cut(s) 1415
PceI AGGCCT 1 cut(s) 1162
PfeI GAWTC 1 cut(s) 211
PflFI GACNNNGTC 1 cut(s) 988
PinAI ACCGGT 1 cut(s) 326
PkrI GCNGC 5 cut(s) 696, 772, 928, 964, 1261
PleI GAGTC 1 cut(s) 772
PpsI GAGTC 1 cut(s) 772
Ppu21I YACGTR 1 cut(s) 1219
PpuMI RGGWCCY 1 cut(s) 1285
PsiI TTATAA 1 cut(s) 738
Psp1406I AACGTT 1 cut(s) 675
Psp5II RGGWCCY 1 cut(s) 1285
Psp6I CCWGG 3 cut(s) 55, 606, 1287
PspFI CCCAGC 1 cut(s) 630
PspGI CCWGG 3 cut(s) 55, 606, 1287
PspN4I GGNNCC 5 cut(s) 196, 366, 592, 1029, 1377
PspPI GGNCC 8 cut(s) 83, 194, 924, 1027, 1227, 1235, 1285, 1376
PspPPI RGGWCCY 1 cut(s) 1285
PsuI RGATCY 4 cut(s) 590, 1057, 1141, 1149
PsyI GACNNNGTC 1 cut(s) 988
RsaI GTAC 3 cut(s) 158, 799, 1217
RsaNI GTAC 3 cut(s) 157, 798, 1216
RseI CAYNNNNRTG 2 cut(s) 305, 423
SaqAI TTAA 2 cut(s) 933, 1392
SatI GCNGC 5 cut(s) 695, 771, 927, 963, 1260
Sau96I GGNCC 8 cut(s) 83, 194, 924, 1027, 1227, 1235, 1285, 1376
SchI GAGTC 1 cut(s) 773
ScrFI CCNGG 5 cut(s) 57, 192, 608, 1238, 1289
SexAI ACCWGGT 1 cut(s) 1287
SfaNI GCATC 2 cut(s) 928, 1069
SgrAI CRCCGGYG 1 cut(s) 326
SinI GGWCC 5 cut(s) 194, 1027, 1227, 1285, 1376
SmiMI CAYNNNNRTG 2 cut(s) 305, 423
Sse9I AATT 2 cut(s) 51, 265
SseBI AGGCCT 1 cut(s) 1162
SsiI CCGC 7 cut(s) 714, 732, 768, 927, 1025, 1260, 1277
SspMI CTAG 3 cut(s) 414, 680, 1137
StuI AGGCCT 1 cut(s) 1162
StyD4I CCNGG 5 cut(s) 55, 190, 606, 1236, 1287
StyI CCWWGG 4 cut(s) 118, 774, 1050, 1404
TaaI ACNGT 1 cut(s) 169
TaiI ACGT 6 cut(s) 286, 678, 704, 1221, 1367, 1391
TaqI TCGA 6 cut(s) 209, 261, 269, 354, 1155, 1320
TaqII GACCGA 1 cut(s) 551
TasI AATT 2 cut(s) 51, 265
TatI WGTACW 1 cut(s) 156
TauI GCSGC 2 cut(s) 929, 1262
TfiI GAWTC 1 cut(s) 211
Tru1I TTAA 2 cut(s) 933, 1392
Tru9I TTAA 2 cut(s) 933, 1392
TscAI CASTG 1 cut(s) 657
TseFI GTSAC 3 cut(s) 59, 610, 1384
TseI GCWGC 3 cut(s) 694, 770, 962
Tsp45I GTSAC 3 cut(s) 59, 610, 1384
TspDTI ATGAA 6 cut(s) 190, 532, 832, 887, 1017, 1316
TspGWI ACGGA 1 cut(s) 1259
TspRI CASTG 1 cut(s) 657
Tth111I GACNNNGTC 1 cut(s) 988
VpaK11BI GGWCC 5 cut(s) 194, 1027, 1227, 1285, 1376
XapI RAATTY 1 cut(s) 51
XbaI TCTAGA 1 cut(s) 679
XceI RCATGY 2 cut(s) 187, 310
XspI CTAG 3 cut(s) 414, 680, 1137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.