Rroxscaffold_7G00207560

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
57475883 .. 57477184
1302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00207560.1

Sequence Viewer

Length: 1134 bp
ATGTCTTCACAAAAAGAAGATCGAAAACCAGAATCAGAGCTTCCCTTGAGAGAAATCCCTGGGGACGATGGCGTACCCTTCCTTGGGCCCATCAAAGATCGCCTAGACTATTTCTACAACCAGGGCAGAGACAACTTCTTCATCTCCCGAATCCTAAAGCACCAATCCACAGTCTTTAGGACCAACATGCCTCCTGGTCCCCTCATTGCTTCAAACCCCAACGTCGTCGTTCTCCTCGATGCCAAAAGCTTCCCCGTTCTCTTGGACACTTCCAAAGTCGAAAAACGAGACGTCTTCACGGGAACTTACATGTCCTCGACCGCCTTCACCGGTGGCTACCGCATTTGCTCTTATCTCGACCCCTCCGAACCGGACCATGCAGCTCTCAAGTACTGGTTCTTGTCCCAGCTCTCCACTCGCAAAGACAGAGTTATACCACTCTTTCGAAACCACTTGTCCGACCACTTCCTCAAACTCGAGGACCAATTGTTCAAAAATGGTGCAGCAGACTTCAACAAACTAAACGACCAAATGTCCTTCAATTTTATCTTTGAGCTCTTTTGCGACAGACCACCATCGGACACAACTTTGAGGACCAAGGGTCCAATCTTTGTGTCCCTCTGGCTCTTGCCCCAGCTTTCTCCTCAGATAACACTAGGGTTGCCCAAGTTTCTAAACTTTGTCGAAGATTTCTTGCTGCACACTGTTCCATTTCCCTGCTCTTCTTGTCAAACCATTCTACAACAAGCTTTACAATGTCTTTTGGGACTCCGCAACTTCGGCTTTGGACGAGGCCGGGAGGCTTGGGATTCCGAGAGACGAGGCTTGCCACAACCTGGTGTTCTTGGACAGTACTTACACCGCCAACTCCGTAATGAAATCAGAACCGCTGTTAAAGAGGCCGGAGGAAAGGTAACCATATCAGCATTGGAGAAGATGACCTTGACAAAATCGGTGGTTTATGAAGCCCTGAGGATTGAGCCCGCCGGTGCCATTCCAAAAAGGGATCCGAAGATTTTCGAGAATCCTAATGAGTTTGTGGGAGATAGGTTTGTTGGGGAGGGAGAGAAGCTGTTGGAGTACGTGTGGTGGTCCAACGGCCCGGAGACGAAAGAGTCCGACGGTGGAGGATAA

Protein Analysis

377

Amino Acids

42.77

Weight (kDa)

7.02

Isoelectric Point (pI)

43.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1114
AatII GACGTC 1 cut(s) 294
AccB1I GGYRCC 1 cut(s) 989
AccB7I CCANNNNNTGG 1 cut(s) 836
AciI CCGC 6 cut(s) 321, 340, 772, 862, 888, 984
AclWI GGATC 2 cut(s) 1001, 1014
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 4 cut(s) 75, 392, 854, 1082
AfiI CCNNNNNNNGG 3 cut(s) 83, 84, 836
AflIII ACRYGT 2 cut(s) 309, 1083
AgeI ACCGGT 1 cut(s) 329
AgsI TTSAA 4 cut(s) 213, 493, 514, 541
AhdI GACNNNNNGTC 2 cut(s) 532, 600
AjnI CCWGG 4 cut(s) 58, 120, 193, 835
AloI GAACNNNNNNTCC 2 cut(s) 473, 505
AluBI AGCT 8 cut(s) 40, 249, 383, 409, 556, 637, 749, 1072
AluI AGCT 8 cut(s) 40, 249, 383, 409, 556, 637, 749, 1072
Alw21I GWGCWC 1 cut(s) 558
Alw26I GTCTC 4 cut(s) 123, 282, 811, 1100
AlwI GGATC 2 cut(s) 1001, 1014
Ama87I CYCGRG 1 cut(s) 476
AoxI GGCC 4 cut(s) 86, 793, 900, 1099
ApaI GGGCCC 1 cut(s) 90
ApeKI GCWGC 3 cut(s) 380, 503, 697
AsiGI ACCGGT 1 cut(s) 329
Asp700I GAANNNNTTC 1 cut(s) 1016
AsuC2I CCSGG 2 cut(s) 797, 1103
AsuHPI GGTGA 1 cut(s) 319
AsuII TTCGAA 1 cut(s) 445
AvaI CYCGRG 1 cut(s) 476
AvaII GGWCC 7 cut(s) 180, 197, 373, 481, 594, 602, 1092
AxyI CCTNAGG 1 cut(s) 971
BaeGI GKGCMC 1 cut(s) 90
BamHI GGATCC 1 cut(s) 1006
BanI GGYRCC 1 cut(s) 989
BanII GRGCYC 3 cut(s) 90, 558, 984
BbsI GAAGAC 1 cut(s) 286
Bbv12I GWGCWC 1 cut(s) 558
BbvI GCAGC 3 cut(s) 392, 515, 684
BccI CCATC 3 cut(s) 62, 98, 583
BceAI ACGGC 1 cut(s) 1114
BciT130I CCWGG 4 cut(s) 60, 122, 195, 837
BcnI CCSGG 2 cut(s) 797, 1103
BcoDI GTCTC 4 cut(s) 123, 282, 811, 1100
BfaI CTAG 2 cut(s) 104, 656
BisI GCNGC 3 cut(s) 381, 504, 698
BlsI GCNGC 3 cut(s) 382, 505, 699
BmcAI AGTACT 2 cut(s) 392, 854
Bme1390I CCNGG 6 cut(s) 60, 122, 195, 797, 837, 1103
Bme18I GGWCC 7 cut(s) 180, 197, 373, 481, 594, 602, 1092
BmeRI GACNNNNNGTC 2 cut(s) 532, 600
BmeT110I CYCGRG 1 cut(s) 476
BmiI GGNNCC 5 cut(s) 88, 199, 603, 991, 1008
BmrFI CCNGG 6 cut(s) 60, 122, 195, 797, 837, 1103
BmsI GCATC 1 cut(s) 229
BpiI GAAGAC 1 cut(s) 286
Bpu14I TTCGAA 1 cut(s) 445
BpuEI CTTGAG 2 cut(s) 67, 371
BpuMI CCSGG 2 cut(s) 797, 1103
BsaAI YACGTR 1 cut(s) 1084
BsaHI GRCGYC 1 cut(s) 291
BsaJI CCNNGG 5 cut(s) 58, 59, 82, 121, 597
BsaWI WCCGGW 2 cut(s) 329, 370
BsaXI ACNNNNNCTCC 4 cut(s) 897, 927, 1070, 1100
Bsc4I CCNNNNNNNGG 3 cut(s) 83, 84, 836
Bse118I RCCGGY 2 cut(s) 329, 986
Bse1I ACTGG 1 cut(s) 398
Bse21I CCTNAGG 1 cut(s) 971
Bse3DI GCAATG 1 cut(s) 204
BseBI CCWGG 4 cut(s) 60, 122, 195, 837
BseDI CCNNGG 5 cut(s) 58, 59, 82, 121, 597
BseLI CCNNNNNNNGG 3 cut(s) 83, 84, 836
BseMI GCAATG 1 cut(s) 204
BseMII CTCAG 2 cut(s) 659, 962
BseNI ACTGG 1 cut(s) 398
BseRI GAGGAG 2 cut(s) 224, 633
BseSI GKGCMC 1 cut(s) 90
BseXI GCAGC 3 cut(s) 392, 515, 684
BseYI CCCAGC 2 cut(s) 405, 633
BsgI GTGCAG 2 cut(s) 522, 683
Bsh1285I CGRYCG 1 cut(s) 321
BshFI GGCC 4 cut(s) 88, 795, 902, 1101
BshNI GGYRCC 1 cut(s) 989
BshTI ACCGGT 1 cut(s) 329
BsiEI CGRYCG 1 cut(s) 321
BsiHKAI GWGCWC 1 cut(s) 558
BsiHKCI CYCGRG 1 cut(s) 476
BsiSI CCGG 6 cut(s) 330, 371, 796, 903, 987, 1103
BslFI GGGAC 5 cut(s) 77, 183, 388, 601, 780
BslI CCNNNNNNNGG 3 cut(s) 83, 84, 836
BsmAI GTCTC 4 cut(s) 123, 282, 811, 1100
BsmBI CGTCTC 3 cut(s) 282, 811, 1100
BsmFI GGGAC 5 cut(s) 77, 183, 388, 601, 780
BsnI GGCC 4 cut(s) 88, 795, 902, 1101
BsoBI CYCGRG 1 cut(s) 476
Bsp119I TTCGAA 1 cut(s) 445
Bsp120I GGGCCC 1 cut(s) 86
Bsp1286I GDGCHC 3 cut(s) 90, 558, 984
Bsp143I GATC 3 cut(s) 19, 97, 1006
BspACI CCGC 6 cut(s) 321, 340, 772, 862, 888, 984
BspANI GGCC 4 cut(s) 88, 795, 902, 1101
BspCNI CTCAG 2 cut(s) 658, 963
BspLI GGNNCC 5 cut(s) 88, 199, 603, 991, 1008
BspPI GGATC 2 cut(s) 1001, 1014
BspQI GCTCTTC 1 cut(s) 727
BspT104I TTCGAA 1 cut(s) 445
BspT107I GGYRCC 1 cut(s) 989
BsrDI GCAATG 1 cut(s) 204
BsrFI RCCGGY 2 cut(s) 329, 986
BsrI ACTGG 1 cut(s) 398
BssAI RCCGGY 2 cut(s) 329, 986
BssECI CCNNGG 5 cut(s) 58, 59, 82, 121, 597
BssMI GATC 3 cut(s) 19, 97, 1006
BssNI GRCGYC 1 cut(s) 291
BssT1I CCWWGG 2 cut(s) 82, 597
Bst2UI CCWGG 4 cut(s) 60, 122, 195, 837
Bst4CI ACNGT 4 cut(s) 172, 706, 852, 1124
Bst6I CTCTTC 1 cut(s) 727
BstACI GRCGYC 1 cut(s) 291
BstBAI YACGTR 1 cut(s) 1084
BstBI TTCGAA 1 cut(s) 445
BstC8I GCNNGC 2 cut(s) 827, 984
BstDEI CTNAG 2 cut(s) 645, 971
BstEII GGTNACC 1 cut(s) 913
BstKTI GATC 3 cut(s) 22, 100, 1009
BstMAI GTCTC 4 cut(s) 123, 282, 811, 1100
BstMBI GATC 3 cut(s) 19, 97, 1006
BstMCI CGRYCG 1 cut(s) 321
BstMWI GCNNNNNNNGC 1 cut(s) 780
BstNI CCWGG 4 cut(s) 60, 122, 195, 837
BstNSI RCATGY 2 cut(s) 190, 313
BstPI GGTNACC 1 cut(s) 913
BstSCI CCNGG 6 cut(s) 58, 120, 193, 795, 835, 1101
BstSLI GKGCMC 1 cut(s) 90
BstV1I GCAGC 3 cut(s) 392, 515, 684
BstV2I GAAGAC 1 cut(s) 286
BstX2I RGATCY 1 cut(s) 1006
BstYI RGATCY 1 cut(s) 1006
Bsu36I CCTNAGG 1 cut(s) 971
BsuRI GGCC 4 cut(s) 88, 795, 902, 1101
BtsIMutI CAGTG 1 cut(s) 702
Cac8I GCNNGC 2 cut(s) 827, 984
Cfr10I RCCGGY 2 cut(s) 329, 986
CsiI ACCWGGT 1 cut(s) 835
Csp6I GTAC 4 cut(s) 74, 391, 853, 1081
CspAI ACCGGT 1 cut(s) 329
CspCI CAANNNNNGTGG 2 cut(s) 936, 971
CviAII CATG 3 cut(s) 187, 310, 377
CviQI GTAC 4 cut(s) 74, 391, 853, 1081
DdeI CTNAG 2 cut(s) 645, 971
DpnI GATC 3 cut(s) 21, 99, 1008
DpnII GATC 3 cut(s) 19, 97, 1006
DrdI GACNNNNNNGTC 1 cut(s) 1114
DriI GACNNNNNGTC 2 cut(s) 532, 600
DseDI GACNNNNNNGTC 1 cut(s) 1114
Eam1104I CTCTTC 1 cut(s) 727
Eam1105I GACNNNNNGTC 2 cut(s) 532, 600
EarI CTCTTC 1 cut(s) 727
Ecl136II GAGCTC 1 cut(s) 556
Eco130I CCWWGG 2 cut(s) 82, 597
Eco24I GRGCYC 3 cut(s) 90, 558, 984
Eco47I GGWCC 7 cut(s) 180, 197, 373, 481, 594, 602, 1092
Eco53kI GAGCTC 1 cut(s) 556
Eco81I CCTNAGG 1 cut(s) 971
Eco88I CYCGRG 1 cut(s) 476
Eco91I GGTNACC 1 cut(s) 913
EcoICRI GAGCTC 1 cut(s) 556
EcoO65I GGTNACC 1 cut(s) 913
EcoRII CCWGG 4 cut(s) 58, 120, 193, 835
EcoT14I CCWWGG 2 cut(s) 82, 597
EcoT38I GRGCYC 3 cut(s) 90, 558, 984
ErhI CCWWGG 2 cut(s) 82, 597
Esp3I CGTCTC 3 cut(s) 282, 811, 1100
FaeI CATG 3 cut(s) 190, 313, 380
FaiI YATR 6 cut(s) 188, 311, 378, 434, 920, 963
FalI AAGNNNNNCTT 2 cut(s) 926, 958
FaqI GGGAC 5 cut(s) 77, 183, 388, 601, 780
FatI CATG 3 cut(s) 186, 309, 376
FauI CCCGC 1 cut(s) 991
Fnu4HI GCNGC 3 cut(s) 381, 504, 698
FriOI GRGCYC 3 cut(s) 90, 558, 984
Fsp4HI GCNGC 3 cut(s) 381, 504, 698
FspBI CTAG 2 cut(s) 104, 656
GluI GCNGC 3 cut(s) 381, 504, 698
GsaI CCCAGC 2 cut(s) 409, 637
HaeIII GGCC 4 cut(s) 88, 795, 902, 1101
HapII CCGG 6 cut(s) 330, 371, 796, 903, 987, 1103
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 3 cut(s) 190, 313, 380
HindIII AAGCTT 2 cut(s) 247, 747
HinfI GANTC 6 cut(s) 32, 150, 768, 809, 1024, 1115
HpaII CCGG 6 cut(s) 330, 371, 796, 903, 987, 1103
HphI GGTGA 1 cut(s) 319
Hpy188I TCNGA 9 cut(s) 37, 367, 460, 580, 648, 814, 884, 1011, 1120
Hpy188III TCNNGA 3 cut(s) 147, 356, 1021
Hpy99I CGWCG 3 cut(s) 227, 230, 1124
HpyAV CCTTC 3 cut(s) 88, 334, 547
HpyCH4III ACNGT 4 cut(s) 172, 706, 852, 1124
HpyCH4IV ACGT 3 cut(s) 222, 291, 1083
HpyCH4V TGCA 3 cut(s) 380, 503, 700
HpyF10VI GCNNNNNNNGC 1 cut(s) 780
HpyF3I CTNAG 2 cut(s) 645, 971
HpySE526I ACGT 3 cut(s) 222, 291, 1083
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 3 cut(s) 190, 313, 380
Kzo9I GATC 3 cut(s) 19, 97, 1006
LguI GCTCTTC 1 cut(s) 727
Lsp1109I GCAGC 3 cut(s) 392, 515, 684
LweI GCATC 1 cut(s) 229
MabI ACCWGGT 1 cut(s) 835
MaeI CTAG 2 cut(s) 104, 656
MaeII ACGT 3 cut(s) 222, 291, 1083
MaeIII GTNAC 1 cut(s) 913
MalI GATC 3 cut(s) 21, 99, 1008
MboI GATC 3 cut(s) 19, 97, 1006
MboII GAAGA 7 cut(s) 29, 130, 286, 698, 714, 946, 1024
MfeI CAATTG 1 cut(s) 485
MflI RGATCY 1 cut(s) 1006
MhlI GDGCHC 3 cut(s) 90, 558, 984
MluCI AATT 2 cut(s) 485, 541
MlyI GAGTC 2 cut(s) 762, 1124
MmeI TCCRAC 3 cut(s) 483, 1056, 1119
MroXI GAANNNNTTC 1 cut(s) 1016
MseI TTAA 1 cut(s) 894
MspA1I CMGCKG 1 cut(s) 890
MspI CCGG 6 cut(s) 330, 371, 796, 903, 987, 1103
MspR9I CCNGG 6 cut(s) 60, 122, 195, 797, 837, 1103
MunI CAATTG 1 cut(s) 485
MvaI CCWGG 4 cut(s) 60, 122, 195, 837
MwoI GCNNNNNNNGC 1 cut(s) 780
NciI CCSGG 2 cut(s) 797, 1103
NdeII GATC 3 cut(s) 19, 97, 1006
NlaIII CATG 3 cut(s) 190, 313, 380
NlaIV GGNNCC 5 cut(s) 88, 199, 603, 991, 1008
NspI RCATGY 2 cut(s) 190, 313
NspV TTCGAA 1 cut(s) 445
PaeR7I CTCGAG 1 cut(s) 476
PasI CCCWGGG 1 cut(s) 59
PciI ACATGT 1 cut(s) 309
PciSI GCTCTTC 1 cut(s) 727
PcsI WCGNNNNNNNCGW 2 cut(s) 234, 363
PdmI GAANNNNTTC 1 cut(s) 1016
PfeI GAWTC 4 cut(s) 32, 150, 809, 1024
PflMI CCANNNNNTGG 1 cut(s) 836
PinAI ACCGGT 1 cut(s) 329
PkrI GCNGC 3 cut(s) 382, 505, 699
PleI GAGTC 2 cut(s) 762, 1123
PpsI GAGTC 2 cut(s) 762, 1123
Ppu21I YACGTR 1 cut(s) 1084
PscI ACATGT 1 cut(s) 309
Psp124BI GAGCTC 1 cut(s) 558
Psp6I CCWGG 4 cut(s) 58, 120, 193, 835
PspEI GGTNACC 1 cut(s) 913
PspFI CCCAGC 2 cut(s) 405, 633
PspGI CCWGG 4 cut(s) 58, 120, 193, 835
PspN4I GGNNCC 5 cut(s) 88, 199, 603, 991, 1008
PspOMI GGGCCC 1 cut(s) 86
PspXI VCTCGAGB 1 cut(s) 476
PsuI RGATCY 1 cut(s) 1006
RsaI GTAC 4 cut(s) 75, 392, 854, 1082
RsaNI GTAC 4 cut(s) 74, 391, 853, 1081
SacI GAGCTC 1 cut(s) 558
SapI GCTCTTC 1 cut(s) 727
SaqAI TTAA 1 cut(s) 894
SatI GCNGC 3 cut(s) 381, 504, 698
Sau3AI GATC 3 cut(s) 19, 97, 1006
ScaI AGTACT 2 cut(s) 392, 854
SchI GAGTC 2 cut(s) 762, 1124
ScrFI CCNGG 6 cut(s) 60, 122, 195, 797, 837, 1103
SduI GDGCHC 3 cut(s) 90, 558, 984
SexAI ACCWGGT 1 cut(s) 835
SfaNI GCATC 1 cut(s) 229
Sfr274I CTCGAG 1 cut(s) 476
SfuI TTCGAA 1 cut(s) 445
SgrAI CRCCGGYG 2 cut(s) 329, 986
SinI GGWCC 7 cut(s) 180, 197, 373, 481, 594, 602, 1092
SlaI CTCGAG 1 cut(s) 476
SmlI CTYRAG 3 cut(s) 46, 386, 476
SmoI CTYRAG 3 cut(s) 46, 386, 476
Sse9I AATT 2 cut(s) 485, 541
SsiI CCGC 6 cut(s) 321, 340, 772, 862, 888, 984
SspMI CTAG 2 cut(s) 104, 656
SstI GAGCTC 1 cut(s) 558
StyD4I CCNGG 6 cut(s) 58, 120, 193, 795, 835, 1101
StyI CCWWGG 2 cut(s) 82, 597
TaaI ACNGT 4 cut(s) 172, 706, 852, 1124
TaiI ACGT 3 cut(s) 225, 294, 1086
TaqI TCGA 9 cut(s) 22, 237, 279, 317, 357, 445, 477, 684, 1020
TasI AATT 2 cut(s) 485, 541
TatI WGTACW 2 cut(s) 390, 852
TfiI GAWTC 4 cut(s) 32, 150, 809, 1024
Tru1I TTAA 1 cut(s) 894
Tru9I TTAA 1 cut(s) 894
TscAI CASTG 1 cut(s) 709
TseI GCWGC 3 cut(s) 380, 503, 697
TspDTI ATGAA 3 cut(s) 130, 891, 978
TspGWI ACGGA 1 cut(s) 860
TspRI CASTG 1 cut(s) 709
Van91I CCANNNNNTGG 1 cut(s) 836
VpaK11BI GGWCC 7 cut(s) 180, 197, 373, 481, 594, 602, 1092
XceI RCATGY 2 cut(s) 190, 313
XcmI CCANNNNNNNNNTGG 1 cut(s) 925
XhoI CTCGAG 1 cut(s) 476
XmnI GAANNNNTTC 1 cut(s) 1016
XspI CTAG 2 cut(s) 104, 656
ZraI GACGTC 1 cut(s) 292
ZrmI AGTACT 2 cut(s) 392, 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.