Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0006745

Physical Location & Seq

Genomic Coordinates Forward (+)

25474481 .. 25477633

Gene Structure 3153 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g34800.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGCCATCAATGGCTTTCATTTCTCTCTCTAAACCCTCCCAATGGCGCCCCCGCCTCTCCAACCCCCAATCCCTCCCTCTTCTCCGCCTCTTCTGCTCCACCGAAACCCCATCCCCCCAACCCGGATCTGCATCCGACGCCCCACCCGCCGAAACCCCAACCGGATCCCCACCCGACCCGCAAAATGGATCCGCCGCCGCCGCGTCGGCCCCACCGCCGCCCCAAACCCCGAAACCCAGGCAGCTCCGTCGGGCCCGCAACCCGGAAAAGACCGAGGACATCATCTGCCGGATGATGGCGAATCGGGCCTGGACGACCCGGTTGCAGAACTCGATCCGCGATTTGGTACCCGAATTCGACCACAATCTCGTCTGGAATGTCCTTCACGGCGCCAAGACCTCCGATCAGGCCCTCCAATTCTTCCGATGGGTCGAGCGTTCCAGGTTGTTTCAGCATGATAGGGAGACCCATTTGAAGATTATTGAGATTCTGGGCCGGGCATCAAAGCTTAACCATGCCCGGTGTATCCTACTTGATATGCCCAAGAAGGGTGTGCAGTGGGATGAGGATCTCTTCATTCATCTGATTGATAGTTATGGCAAGGCCGGGATTGTTCAGGAATCGGTCAAGCTTTTCAATCAGATGAAGGAACTGGGTGTGGAGCGGAGTCTCAAGTCGTACGAGGCTCTGTTCAAGAGTATTTTGCGGAGGGGGAGGTATATGATGGGGAAGAGGTACTTTAATCATATGTTGGCTGAGGGGATAGAGCCTACTAGGCATACTTATAATATTATGATTTGGGGTTTCTTCTTGTCCTTGAGGTTGGAGACTGCAAAGCGGTTCTTCGAGGACATGAAAACTAGAGGACTTAGTCCTGATGTTGTCACCTATAACACGATGATTAATGGGTATAATCGGTTTAAGATGATGGATGAGGCCGAGCAGTTGTTTGTAGAGTTGAAGGGAAAGAATATACAGCCCAATGTTATAAGTTATACTACCATGATTAAAGGGTATGTTTCTGTTGGGAAAGTGGATGATGGATACAGGCTGTTTCAAGAGATGAAGTCTTTTGGTATTAAGCCTAATGATGTCACATTCTCGACTTTATTGCCAGGGCTTTGTGATGCGGAGAAAAAGGATGAAGCTCAGAATTTGTTAAGTGAGATGGTTGAGAGGCACATTGCTCCAAAGGATAATTCAGTCTTCGAGAAATTGTTGTATTGTCAGTGTAAATCCGGAGACTTGGATGCGGCTGCCAATGTGCTCAAGGCAATGATTAGGCTGCACATTCCGACAGAGGCTGGTCATTATGGTATCCTTATTGAGAACTTTTGCAAGGCCGGGGTGTATGATCGGGCAGTTCACTTGCTTGATAGGCTCATTGAGAAAGAAATTATTATGAGGTCCCAGAGTTCTATGGAATTGGAGGCTAGTGCTTACAATCCAATGATTGAGTATCTATGCGACCATGGCCAGACAGATAAAGCTGAAGTCCTTTTCAGGCAGTTGATGAAAAAGGGTGTTCAGGATTCAGTTGCCTTCAATAATTTGATCCGTGGGCATGCTAAGGAAGGAAATTCTGATTCTGCTTTTGAAATTTTGAAGATTATGGGTAGAAGAGGGGTTCCCAGAGAAGCGGATTCCTACAAGTTGCTCATTAAGAGCTACCTGAGTAAAGGTGAACCGGCTGATGCTAAAACAGCTTTGGACAGTATGATTGAAAATGGGCATGTTCCAGAATCATCACTATTCAGGTCAGTAATGGAGAGTCTGTTTGAAGATGGCAGGGTTCAAACGGCAAGCCGCATAATGAAGAGTATGGTAGAGAAGGGAGTGAACGAGAACATGGATTTAGTTGCCAAGATTTTGGAAGCCCTCTTTATCCGAGGTCATGTTGAGGAAGCGCTTGGACGGATTGATCTACTTATGCAAAGTGGGTGTGCACCTGAGTTTGATAGCCTCTTATCCGTTCTTGCTGAAAAAGGAAAGACCATTGCAGCTGTTAAGCTATTAGATTTTTGCCTTGAGCGAGATTGCATGGTAGATTTCAAAAGCTATGATAAGGTGTTGGATGCTCTTTTAGAATCAGGAAAGACTCTAAATGCATACTCAATTTTGTGTAAAATAATGGACAAAGGAGGGGTCACTGATTGGCGTAGCACTGACGATCTGATTAAGAGCCTCAATTTAGAGGGTAACACAAAACAAGCTGATGTCCTCTCTAGAAAGATAAAGGGAGGAGAGGATATGGCCGGTCAAAGTAAAAAGGGGAAGAAACAAGTTTCTATGGCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009451 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009987 GO:0016020 GO:0016070 GO:0016787 GO:0016788 GO:0031976 GO:0031984 GO:0034357 GO:0034641 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0055035 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

767

Amino Acids

86.34

Weight (kDa)

8.48

Isoelectric Point (pI)

41.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	226 - 269	1.2e-06	PPR repeat family
PPR_3	PF13812	248 - 304	1.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	262 - 304	1.1e-12	PPR repeat family
PPR_long	PF17177	275 - 371	6.3e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	281 - 340	7e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	288 - 319	3.1e-10	PPR repeat
PPR_2	PF13041	292 - 340	2.1e-16	PPR repeat family
PPR	PF01535	295 - 325	1.1e-07	PPR repeat
PPR_3	PF13812	316 - 371	3.6e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	323 - 356	1.5e-08	PPR repeat
PPR_2	PF13041	327 - 376	2e-17	PPR repeat family
PPR	PF01535	330 - 360	8.9e-08	PPR repeat
PPR_long	PF17177	345 - 474	2.9e-12	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	359 - 391	4.9e-08	PPR repeat
TPR_24	PF23276	403 - 533	1e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	511 - 556	1.7e-07	PPR repeat family
TPR_24	PF23276	522 - 638	2.1e-08	Fungal tetratrico peptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0006745)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37230
fragaria_vesca	FvH4_5g34800
malus_domestica	MD08G1198800.v1.1 MD15G1385700.v1.1
prunus_persica	Prupe.1G532500_v2.0.a1
pyrus_communis	pycom08g17270 pycom15g34600
rosa_chinensis	RchiOBHm_Chr6g0274921
rosa_laevigata	RLG00000013509
rosa_multiflora	Rmu_co8266267.1_g000001 Rmu_sc0002311.1_g000019
rosa_roxburghii	Rroxscaffold_1G00028490 Rroxscaffold_7G00193820
rosa_rugosa	Rorug05G0270600 Rorug06G0086200
rosa_samantha	Rh5AG343600 Rh5BG354200 Rh5CG380200 Rh5DG369700 Rh6AG201000 Rh6BG204600 Rh6CG206000 Rh6DG196200
rosa_wichuraiana	Rw5G032350 Rw5G032460 Rw6G017490

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	786, 989
Acc65I	GGTACC	1 cut(s)	346
AccB1I	GGYRCC	3 cut(s)	45, 346, 389
AccBSI	CCGCTC	1 cut(s)	664
AccII	CGCG	2 cut(s)	203, 339
AccIII	TCCGGA	1 cut(s)	1238
AclWI	GGATC	8 cut(s)	133, 159, 172, 183, 196, 328, 576, 1549
AcoI	YGGCCR	2 cut(s)	1474, 2253
AcsI	RAATTY	4 cut(s)	353, 1153, 1579, 1599
AcuI	CTGAAG	1 cut(s)	1512
AcyI	GRCGYC	3 cut(s)	46, 138, 390
AfaI	GTAC	3 cut(s)	348, 680, 737
AfeI	AGCGCT	1 cut(s)	1908
AfiI	CCNNNNNNNGG	7 cut(s)	42, 122, 185, 262, 295, 343, 548
AjnI	CCWGG	4 cut(s)	236, 308, 440, 1114
AjuI	GAANNNNNNNTTGG	2 cut(s)	1183, 1215
Alw21I	GWGCWC	2 cut(s)	1269, 1948
Alw26I	GTCTC	4 cut(s)	458, 674, 821, 1236
Alw44I	GTGCAC	1 cut(s)	1944
AlwI	GGATC	8 cut(s)	133, 159, 172, 183, 196, 328, 576, 1549
AlwNI	CAGNNNCTG	1 cut(s)	1304
Aor13HI	TCCGGA	1 cut(s)	1238
Aor51HI	AGCGCT	1 cut(s)	1908
ApaI	GGGCCC	1 cut(s)	256
ApaLI	GTGCAC	1 cut(s)	1944
ApeKI	GCWGC	4 cut(s)	241, 1256, 1285, 2000
ApoI	RAATTY	4 cut(s)	353, 1153, 1579, 1599
ArsI	GACNNNNNNTTYG	2 cut(s)	2130, 2162
AseI	ATTAAT	1 cut(s)	903
Asp718I	GGTACC	1 cut(s)	346
AspLEI	GCGC	3 cut(s)	48, 392, 1909
AspS9I	GGNCC	7 cut(s)	208, 252, 253, 306, 409, 493, 1407
AsuC2I	CCSGG	7 cut(s)	123, 263, 319, 497, 520, 607, 1345
AsuHPI	GGTGA	2 cut(s)	877, 1694
AvaII	GGWCC	1 cut(s)	1407
BaeGI	GKGCMC	2 cut(s)	256, 1948
BalI	TGGCCA	1 cut(s)	1476
BamHI	GGATCC	2 cut(s)	164, 188
BanI	GGYRCC	3 cut(s)	45, 346, 389
BanII	GRGCYC	1 cut(s)	256
BbsI	GAAGAC	1 cut(s)	1198
Bbv12I	GWGCWC	2 cut(s)	1269, 1948
BbvCI	CCTCAGC	1 cut(s)	756
BbvI	GCAGC	4 cut(s)	253, 1243, 1272, 2012
BccI	CCATC	9 cut(s)	13, 118, 289, 420, 718, 922, 1034, 1162, 1778
BceAI	ACGGC	2 cut(s)	403, 1815
BcgI	CGANNNNNNTGC	6 cut(s)	230, 264, 304, 338, 1093, 1127
BciT130I	CCWGG	4 cut(s)	238, 310, 442, 1116
BciVI	GTATCC	3 cut(s)	536, 1037, 1328
BcnI	CCSGG	7 cut(s)	123, 263, 319, 497, 520, 607, 1345
BcoDI	GTCTC	4 cut(s)	458, 674, 821, 1236
BfaI	CTAG	4 cut(s)	774, 861, 1434, 2226
BfoI	RGCGCY	3 cut(s)	49, 393, 1910
BfuI	GTATCC	3 cut(s)	536, 1037, 1328
BglI	GCCNNNNNGGC	2 cut(s)	206, 775
Bme18I	GGWCC	1 cut(s)	1407
BmgT120I	GGNCC	7 cut(s)	208, 252, 253, 306, 409, 493, 1407
BmiI	GGNNCC	9 cut(s)	47, 166, 190, 210, 254, 348, 391, 1409, 1629
BmrI	ACTGGG	1 cut(s)	662
BmsI	GCATC	6 cut(s)	140, 509, 1117, 1240, 1684, 2065
BmuI	ACTGGG	1 cut(s)	662
BpiI	GAAGAC	1 cut(s)	1198
Bpu10I	CCTNAGC	2 cut(s)	756, 1569
BpuEI	CTTGAG	4 cut(s)	656, 838, 1253, 2048
BpuMI	CCSGG	7 cut(s)	123, 263, 319, 497, 520, 607, 1345
BsaBI	GATNNNNATC	2 cut(s)	130, 567
BsaHI	GRCGYC	3 cut(s)	46, 138, 390
BsaI	GGTCTC	1 cut(s)	458
BsaJI	CCNNGG	7 cut(s)	236, 273, 1115, 1344, 1471, 1558, 1888
BsaWI	WCCGGW	2 cut(s)	161, 1238
BsaXI	ACNNNNNCTCC	2 cut(s)	1760, 1790
Bsc4I	CCNNNNNNNGG	7 cut(s)	42, 122, 185, 262, 295, 343, 548
Bse118I	RCCGGY	2 cut(s)	1687, 2255
Bse1I	ACTGG	1 cut(s)	657
Bse3DI	GCAATG	3 cut(s)	1182, 1281, 1995
Bse8I	GATNNNNATC	2 cut(s)	130, 567
BseAI	TCCGGA	1 cut(s)	1238
BseBI	CCWGG	4 cut(s)	238, 310, 442, 1116
BseDI	CCNNGG	7 cut(s)	236, 273, 1115, 1344, 1471, 1558, 1888
BseGI	GGATG	9 cut(s)	110, 131, 297, 568, 937, 1042, 1147, 1255, 2080
BseJI	GATNNNNATC	2 cut(s)	130, 567
BseLI	CCNNNNNNNGG	7 cut(s)	42, 122, 185, 262, 295, 343, 548
BseMI	GCAATG	3 cut(s)	1182, 1281, 1995
BseMII	CTCAG	4 cut(s)	747, 1163, 1664, 1941
BseNI	ACTGG	1 cut(s)	657
BseRI	GAGGAG	1 cut(s)	2256
BseSI	GKGCMC	2 cut(s)	256, 1948
BseXI	GCAGC	4 cut(s)	253, 1243, 1272, 2012
BsgI	GTGCAG	2 cut(s)	575, 1271
Bsh1236I	CGCG	2 cut(s)	203, 339
BshNI	GGYRCC	3 cut(s)	45, 346, 389
BsiHKAI	GWGCWC	2 cut(s)	1269, 1948
BsiWI	CGTACG	1 cut(s)	678
BslFI	GGGAC	1 cut(s)	1393
BslI	CCNNNNNNNGG	7 cut(s)	42, 122, 185, 262, 295, 343, 548
BsmAI	GTCTC	4 cut(s)	458, 674, 821, 1236
BsmFI	GGGAC	1 cut(s)	1393
Bso31I	GGTCTC	1 cut(s)	458
Bsp120I	GGGCCC	1 cut(s)	252
Bsp1286I	GDGCHC	3 cut(s)	256, 1269, 1948
Bsp13I	TCCGGA	1 cut(s)	1238
Bsp19I	CCATGG	1 cut(s)	1471
BspCNI	CTCAG	4 cut(s)	748, 1162, 1665, 1942
BspEI	TCCGGA	1 cut(s)	1238
BspFNI	CGCG	2 cut(s)	203, 339
BspHI	TCATGA	1 cut(s)	2297
BspLI	GGNNCC	9 cut(s)	47, 166, 190, 210, 254, 348, 391, 1409, 1629
BspPI	GGATC	8 cut(s)	133, 159, 172, 183, 196, 328, 576, 1549
BspT107I	GGYRCC	3 cut(s)	45, 346, 389
BspTNI	GGTCTC	1 cut(s)	458
BsrBI	CCGCTC	1 cut(s)	664
BsrDI	GCAATG	3 cut(s)	1182, 1281, 1995
BsrFI	RCCGGY	2 cut(s)	1687, 2255
BsrI	ACTGG	1 cut(s)	657
BssAI	RCCGGY	2 cut(s)	1687, 2255
BssECI	CCNNGG	7 cut(s)	236, 273, 1115, 1344, 1471, 1558, 1888
BssNI	GRCGYC	3 cut(s)	46, 138, 390
BssT1I	CCWWGG	1 cut(s)	1471
Bst2UI	CCWGG	4 cut(s)	238, 310, 442, 1116
Bst4CI	ACNGT	1 cut(s)	1715
Bst6I	CTCTTC	6 cut(s)	84, 95, 578, 725, 1615, 1811
BstACI	GRCGYC	3 cut(s)	46, 138, 390
BstC8I	GCNNGC	3 cut(s)	256, 1566, 1804
BstDEI	CTNAG	6 cut(s)	756, 869, 1149, 1569, 1673, 1950
BstDSI	CCRYGG	2 cut(s)	1471, 1558
BstF5I	GGATG	9 cut(s)	110, 131, 297, 568, 937, 1042, 1147, 1255, 2080
BstFNI	CGCG	2 cut(s)	203, 339
BstH2I	RGCGCY	3 cut(s)	49, 393, 1910
BstHHI	GCGC	3 cut(s)	48, 392, 1909
BstMAI	GTCTC	4 cut(s)	458, 674, 821, 1236
BstNI	CCWGG	4 cut(s)	238, 310, 442, 1116
BstNSI	RCATGY	2 cut(s)	1568, 1736
BstSLI	GKGCMC	2 cut(s)	256, 1948
BstUI	CGCG	2 cut(s)	203, 339
BstV1I	GCAGC	4 cut(s)	253, 1243, 1272, 2012
BstV2I	GAAGAC	1 cut(s)	1198
BstX2I	RGATCY	4 cut(s)	125, 164, 188, 568
BstXI	CCANNNNNNTGG	1 cut(s)	1870
BstYI	RGATCY	4 cut(s)	125, 164, 188, 568
BsuI	GTATCC	3 cut(s)	536, 1037, 1328
BtgI	CCRYGG	2 cut(s)	1471, 1558
BtsCI	GGATG	9 cut(s)	110, 131, 297, 568, 937, 1042, 1147, 1255, 2080
BtsI	GCAGTG	1 cut(s)	563
BtsIMutI	CAGTG	4 cut(s)	563, 1235, 2148, 2163
Cac8I	GCNNGC	3 cut(s)	256, 1566, 1804
CaiI	CAGNNNCTG	1 cut(s)	1304
CciI	TCATGA	1 cut(s)	2297
CfoI	GCGC	3 cut(s)	48, 392, 1909
Cfr10I	RCCGGY	2 cut(s)	1687, 2255
Cfr13I	GGNCC	7 cut(s)	208, 252, 253, 306, 409, 493, 1407
CseI	GACGC	2 cut(s)	146, 192
Csp6I	GTAC	3 cut(s)	347, 679, 736
CviQI	GTAC	3 cut(s)	347, 679, 736
DdeI	CTNAG	6 cut(s)	756, 869, 1149, 1569, 1673, 1950
DinI	GGCGCC	2 cut(s)	47, 391
EaeI	YGGCCR	2 cut(s)	1474, 2253
Eam1104I	CTCTTC	6 cut(s)	84, 95, 578, 725, 1615, 1811
EarI	CTCTTC	6 cut(s)	84, 95, 578, 725, 1615, 1811
EciI	GGCGGA	2 cut(s)	74, 181
Eco130I	CCWWGG	1 cut(s)	1471
Eco24I	GRGCYC	1 cut(s)	256
Eco31I	GGTCTC	1 cut(s)	458
Eco47I	GGWCC	1 cut(s)	1407
Eco47III	AGCGCT	1 cut(s)	1908
Eco57I	CTGAAG	1 cut(s)	1512
EcoO109I	RGGNCCY	2 cut(s)	409, 1407
EcoRI	GAATTC	1 cut(s)	353
EcoRII	CCWGG	4 cut(s)	236, 308, 440, 1114
EcoT14I	CCWWGG	1 cut(s)	1471
EcoT22I	ATGCAT	1 cut(s)	2110
EcoT38I	GRGCYC	1 cut(s)	256
EgeI	GGCGCC	2 cut(s)	47, 391
EheI	GGCGCC	2 cut(s)	47, 391
ErhI	CCWWGG	1 cut(s)	1471
FalI	AAGNNNNNCTT	4 cut(s)	722, 754, 827, 859
FaqI	GGGAC	1 cut(s)	1393
FauI	CCCGC	4 cut(s)	59, 154, 186, 263
FauNDI	CATATG	1 cut(s)	747
FokI	GGATG	9 cut(s)	97, 118, 304, 575, 944, 1049, 1154, 1262, 2087
FriOI	GRGCYC	1 cut(s)	256
FspBI	CTAG	4 cut(s)	774, 861, 1434, 2226
GlaI	GCGC	3 cut(s)	47, 391, 1908
HaeII	RGCGCY	3 cut(s)	49, 393, 1910
HgaI	GACGC	2 cut(s)	146, 192
HhaI	GCGC	3 cut(s)	48, 392, 1909
Hin1I	GRCGYC	3 cut(s)	46, 138, 390
Hin6I	GCGC	3 cut(s)	46, 390, 1907
HinP1I	GCGC	3 cut(s)	46, 390, 1907
HindIII	AAGCTT	2 cut(s)	506, 629
HphI	GGTGA	2 cut(s)	877, 1694
Hpy166II	GTNNAC	4 cut(s)	1366, 1685, 1840, 1946
Hpy8I	GTNNAC	4 cut(s)	1366, 1685, 1840, 1946
Hpy99I	CGWCG	3 cut(s)	140, 208, 252
HpyAV	CCTTC	7 cut(s)	392, 541, 640, 955, 1552, 1568, 1825
HpyCH4III	ACNGT	1 cut(s)	1715
HpyF3I	CTNAG	6 cut(s)	756, 869, 1149, 1569, 1673, 1950
Hsp92I	GRCGYC	3 cut(s)	46, 138, 390
HspAI	GCGC	3 cut(s)	46, 390, 1907
KasI	GGCGCC	2 cut(s)	45, 389
Kpn2I	TCCGGA	1 cut(s)	1238
KpnI	GGTACC	1 cut(s)	350
LmnI	GCTCC	4 cut(s)	101, 249, 661, 1192
Lsp1109I	GCAGC	4 cut(s)	253, 1243, 1272, 2012
LweI	GCATC	6 cut(s)	140, 509, 1117, 1240, 1684, 2065
MaeI	CTAG	4 cut(s)	774, 861, 1434, 2226
MaeIII	GTNAC	4 cut(s)	883, 1093, 2146, 2198
MbiI	CCGCTC	1 cut(s)	664
MflI	RGATCY	4 cut(s)	125, 164, 188, 568
MhlI	GDGCHC	3 cut(s)	256, 1269, 1948
MlsI	TGGCCA	1 cut(s)	1476
MluNI	TGGCCA	1 cut(s)	1476
Mly113I	GGCGCC	2 cut(s)	46, 390
MlyI	GAGTC	3 cut(s)	676, 1780, 2092
MmeI	TCCRAC	5 cut(s)	84, 159, 804, 1319, 2052
Mox20I	TGGCCA	1 cut(s)	1476
Mph1103I	ATGCAT	1 cut(s)	2110
MroI	TCCGGA	1 cut(s)	1238
MscI	TGGCCA	1 cut(s)	1476
Msp20I	TGGCCA	1 cut(s)	1476
MspA1I	CMGCKG	1 cut(s)	2003
MvaI	CCWGG	4 cut(s)	238, 310, 442, 1116
MvnI	CGCG	2 cut(s)	203, 339
NarI	GGCGCC	2 cut(s)	46, 390
NciI	CCSGG	7 cut(s)	123, 263, 319, 497, 520, 607, 1345
NcoI	CCATGG	1 cut(s)	1471
NdeI	CATATG	1 cut(s)	747
NlaIV	GGNNCC	9 cut(s)	47, 166, 190, 210, 254, 348, 391, 1409, 1629
NmeAIII	GCCGAG	1 cut(s)	964
NmuCI	GTSAC	3 cut(s)	883, 1093, 2146
NsiI	ATGCAT	1 cut(s)	2110
NspI	RCATGY	2 cut(s)	1568, 1736
PaeI	GCATGC	1 cut(s)	1568
PagI	TCATGA	1 cut(s)	2297
PfeI	GAWTC	8 cut(s)	301, 487, 620, 1532, 1586, 1643, 1742, 2087
Pfl23II	CGTACG	1 cut(s)	678
PflFI	GACNNNGTC	1 cut(s)	870
PleI	GAGTC	3 cut(s)	675, 1779, 2092
PluTI	GGCGCC	2 cut(s)	49, 393
PpsI	GAGTC	3 cut(s)	675, 1779, 2092
PpuMI	RGGWCCY	1 cut(s)	1407
PshBI	ATTAAT	1 cut(s)	903
PsiI	TTATAA	2 cut(s)	786, 989
Psp5II	RGGWCCY	1 cut(s)	1407
Psp6I	CCWGG	4 cut(s)	236, 308, 440, 1114
PspGI	CCWGG	4 cut(s)	236, 308, 440, 1114
PspLI	CGTACG	1 cut(s)	678
PspN4I	GGNNCC	9 cut(s)	47, 166, 190, 210, 254, 348, 391, 1409, 1629
PspOMI	GGGCCC	1 cut(s)	252
PspPI	GGNCC	7 cut(s)	208, 252, 253, 306, 409, 493, 1407
PspPPI	RGGWCCY	1 cut(s)	1407
PstNI	CAGNNNCTG	1 cut(s)	1304
PsuI	RGATCY	4 cut(s)	125, 164, 188, 568
PsyI	GACNNNGTC	1 cut(s)	870
PvuII	CAGCTG	1 cut(s)	2003
RsaI	GTAC	3 cut(s)	348, 680, 737
RsaNI	GTAC	3 cut(s)	347, 679, 736
Sau96I	GGNCC	7 cut(s)	208, 252, 253, 306, 409, 493, 1407
SchI	GAGTC	3 cut(s)	676, 1780, 2092
SduI	GDGCHC	3 cut(s)	256, 1269, 1948
SfaNI	GCATC	6 cut(s)	140, 509, 1117, 1240, 1684, 2065
SfoI	GGCGCC	2 cut(s)	47, 391
SinI	GGWCC	1 cut(s)	1407
SmlI	CTYRAG	4 cut(s)	671, 817, 1268, 2027
SmoI	CTYRAG	4 cut(s)	671, 817, 1268, 2027
SphI	GCATGC	1 cut(s)	1568
SspDI	GGCGCC	2 cut(s)	45, 389
SspI	AATATT	1 cut(s)	790
SspMI	CTAG	4 cut(s)	774, 861, 1434, 2226
StyI	CCWWGG	1 cut(s)	1471
TaaI	ACNGT	1 cut(s)	1715
TaqI	TCGA	6 cut(s)	332, 357, 432, 846, 1103, 1209
TaqII	GACCGA	2 cut(s)	287, 613
TauI	GCSGC	6 cut(s)	197, 200, 203, 220, 1256, 1809
TfiI	GAWTC	8 cut(s)	301, 487, 620, 1532, 1586, 1643, 1742, 2087
TscAI	CASTG	4 cut(s)	563, 1235, 2155, 2170
TseFI	GTSAC	3 cut(s)	883, 1093, 2146
TseI	GCWGC	4 cut(s)	241, 1256, 1285, 2000
Tsp45I	GTSAC	3 cut(s)	883, 1093, 2146
TspGWI	ACGGA	4 cut(s)	236, 1547, 1930, 1960
TspRI	CASTG	4 cut(s)	563, 1235, 2155, 2170
Tth111I	GACNNNGTC	1 cut(s)	870
VneI	GTGCAC	1 cut(s)	1944
VpaK11BI	GGWCC	1 cut(s)	1407
VspI	ATTAAT	1 cut(s)	903
XapI	RAATTY	4 cut(s)	353, 1153, 1579, 1599
XbaI	TCTAGA	1 cut(s)	2225
XceI	RCATGY	2 cut(s)	1568, 1736
XspI	CTAG	4 cut(s)	774, 861, 1434, 2226
Zsp2I	ATGCAT	1 cut(s)	2110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.