Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0006745

Physical Location & Seq

Genomic Coordinates Forward (+)

54935807 .. 54937878

Gene Structure 2072 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G032460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGCCCAAAAAGGGTGTGCAATGGGATGAGGACCTCTTCATTCATCTTATTGATAGTTATGGAAAGGCCGGCATTGTTCAGGAGTCGGCCAAGCTTTTCAATCAGATGAAGGAATTGGGTGTGGAGCGAAGTCTCAAGTCGTATGAGGCTCTGTTTAAGAGCATTTTGCGGAGGGGGCGGTATGTGATGGGGAAGAGGTACTTTAATCACATGTTGGCTGAGGGAATAGAGCCCACTAGGCATACTTATAACATTCTGATTTGGGGTTTCTTCTTGTCCTTGAGGTTGGAGACTGCAAAACGGTTTTTCGAGGACATGAAAAGTAGAGGAATTAATCATGATGTTGTCACCTATAACACGATGATTAATGGGTACAATCGGTTTACGCTGATGGATGAGGCCGAGCAGTTGTTTGTAGAGTTGAAGGGAAAGAATATACAGCCCAATGTTATAAGTTATAGTACCATGATTAAAGGGTATGTTTCTGTTGGGAGAGCGGATGATGGATTCAGGCTGTTTCAAGAGATGAAGTCTTTTGGTATTAGGCCTAATGATGTCACATTTTCGACTTTGTTGCCAGGGCTTTGCGATGCGGAGAAAAAGGATGAAGCTCAGAATATATTGAATGAGATGGTTGAGAGGCATATTGCTCCCAAGGATAATTTAATCTTTGAGAAATTGTTATACTGTCAGTGTAAGTCTGGGGATTTGGATGCGGCTGCCAATGTTCTCAAGGCAATGATTAGGCTGCACATTCCGACAGAGGCTGGTCATTACGGTCTCCTTATTGAGAACTTCTGCAAGGCTGGGGTGTATGATCGAGCAGTTCACTTGCTTGATAAGCTCATTGAGAAAGAAATTATTATGAGGCCCCTGAGTTCTATGGAATTGGAGGCTAGTGCTTACAACCCAATGATTGAGTATCTGTGCAACCATGGGCAGACAGGTAAAGCTGAAGTCCTTTTCAGGCAGTTGATGAAAAAGGGCGTTCAGGATTCAGAAGGAAATTCTGATTCTGCTTTTGAGATTTTAAAGATTATGGGTAGAAGAGGGGTTCCTAGAGAAGCAGATTCCTACAAGTTGCTCATTAAGAGCTACCTAAGTAAAGGTGAACCAGCTGATGCTAAAACAGCTTTGGACAGTATGATTGAAAATGGGCATGTTCCAGAATCATCACTATTCAGGTCAGTAATGGAGAGTCTGTTTGAGGATGGTAGAGTTCAAACAGCAAGCCGCGTAATGAAGAGTATGGTAGAGAAGGGAGTGAATGAGAACATGGATTTAGTCGCCAAGGTTTTGGAAGCGCTCTTTATCAGAGGTCATGTTGAGGAAGCACTTGGACGGGTTGATCTACTTATGCAAAGTTGGTGTGCACCTGAGTTTGATAGCCTCTTATCTCTCCTTGCTGAAAAAGGAAAGACCATTGCAGCTGCTAAGCTATTAGATTTTTGCCTTGAGAGAGATTGCATGGTAGATTTTTCAAGTTATGATAAGGTGTTAGATGGTCTCTTAGCATCAGGAAAGACTCTAAATGCATATTCAATTTTGTGTAAAATAATGGAGAAAGGAGGGGTTACTGATTGGCATTGCACTGATGATCTGATTAAGAGCCTCAATCTAGAGGGTAACACAAAACAAGCTGACGTCCTCTCTAGAATGATTAAGGGAGGGGAGGAGAAAGCCAGTCGGAGTAAAAAAGGGAAGAAACAAGTTTCTGTGGCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009451 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009987 GO:0016020 GO:0016070 GO:0016787 GO:0016788 GO:0031976 GO:0031984 GO:0034357 GO:0034641 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0055035 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

575

Amino Acids

64.82

Weight (kDa)

6.67

Isoelectric Point (pI)

34.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	47 - 90	1.4e-06	PPR repeat family
PPR_2	PF13041	82 - 125	3.3e-12	PPR repeat family
PPR_3	PF13812	102 - 161	2.2e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	109 - 140	5.7e-08	PPR repeat
PPR_2	PF13041	114 - 161	7.4e-15	PPR repeat family
PPR	PF01535	116 - 146	1.8e-06	PPR repeat
PPR_1	PF12854	144 - 177	6.6e-08	PPR repeat
PPR_2	PF13041	148 - 197	4.9e-16	PPR repeat family
PPR	PF01535	151 - 181	2.5e-07	PPR repeat
PPR_long	PF17177	166 - 285	5.1e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	171 - 218	2.4e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	180 - 212	2.5e-07	PPR repeat
TPR_24	PF23276	335 - 447	1.7e-07	Fungal tetratrico peptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006745)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37230
fragaria_vesca	FvH4_5g34800
malus_domestica	MD08G1198800.v1.1 MD15G1385700.v1.1
prunus_persica	Prupe.1G532500_v2.0.a1
pyrus_communis	pycom08g17270 pycom15g34600
rosa_chinensis	RchiOBHm_Chr6g0274921
rosa_laevigata	RLG00000013509
rosa_multiflora	Rmu_co8266267.1_g000001 Rmu_sc0002311.1_g000019
rosa_roxburghii	Rroxscaffold_1G00028490 Rroxscaffold_7G00193820
rosa_rugosa	Rorug05G0270600 Rorug06G0086200
rosa_samantha	Rh5AG343600 Rh5BG354200 Rh5CG380200 Rh5DG369700 Rh6AG201000 Rh6BG204600 Rh6CG206000 Rh6DG196200
rosa_wichuraiana	Rw5G032350 Rw5G032460 Rw6G017490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	249, 452
AatII	GACGTC	1 cut(s)	1647
AccBSI	CCGCTC	1 cut(s)	497
AccII	CGCG	1 cut(s)	1236
AciI	CCGC	6 cut(s)	169, 178, 497, 593, 716, 1234
AcoI	YGGCCR	1 cut(s)	87
AcsI	RAATTY	1 cut(s)	1006
AcuI	CTGAAG	1 cut(s)	975
AcyI	GRCGYC	1 cut(s)	1644
AfaI	GTAC	3 cut(s)	200, 374, 463
AfeI	AGCGCT	1 cut(s)	1305
AfiI	CCNNNNNNNGG	1 cut(s)	11
AflIII	ACRYGT	1 cut(s)	210
AgsI	TTSAA	8 cut(s)	100, 424, 521, 625, 1151, 1223, 1482, 1542
AjnI	CCWGG	1 cut(s)	577
Alw21I	GWGCWC	1 cut(s)	1375
Alw26I	GTCTC	4 cut(s)	137, 284, 785, 1511
Alw44I	GTGCAC	1 cut(s)	1371
AlwNI	CAGNNNCTG	1 cut(s)	767
Aor51HI	AGCGCT	1 cut(s)	1305
AoxI	GGCC	5 cut(s)	66, 87, 399, 545, 869
ApaLI	GTGCAC	1 cut(s)	1371
ApeKI	GCWGC	4 cut(s)	719, 748, 1427, 1430
ApoI	RAATTY	1 cut(s)	1006
AseI	ATTAAT	2 cut(s)	333, 366
AspLEI	GCGC	1 cut(s)	1306
AspS9I	GGNCC	2 cut(s)	31, 870
AsuHPI	GGTGA	2 cut(s)	340, 1121
AvaII	GGWCC	1 cut(s)	31
BaeGI	GKGCMC	1 cut(s)	1375
BanII	GRGCYC	1 cut(s)	234
Bbv12I	GWGCWC	1 cut(s)	1375
BbvCI	CCTCAGC	1 cut(s)	219
BbvI	GCAGC	4 cut(s)	706, 735, 1417, 1439
BccI	CCATC	6 cut(s)	181, 385, 497, 625, 1205, 1496
BcgI	CGANNNNNNTGC	2 cut(s)	556, 590
BciT130I	CCWGG	1 cut(s)	579
BcoDI	GTCTC	4 cut(s)	137, 284, 785, 1511
BfaI	CTAG	5 cut(s)	237, 897, 1059, 1619, 1653
BfoI	RGCGCY	1 cut(s)	1307
BglI	GCCNNNNNGGC	1 cut(s)	238
BisI	GCNGC	6 cut(s)	717, 720, 749, 1234, 1428, 1431
BlpI	GCTNAGC	1 cut(s)	1434
BlsI	GCNGC	6 cut(s)	718, 721, 750, 1235, 1429, 1432
Bme1390I	CCNGG	1 cut(s)	579
Bme18I	GGWCC	1 cut(s)	31
BmgT120I	GGNCC	2 cut(s)	31, 870
BmiI	GGNNCC	2 cut(s)	872, 1056
BmrFI	CCNGG	1 cut(s)	579
BmsI	GCATC	4 cut(s)	580, 703, 1111, 1523
Bpu10I	CCTNAGC	1 cut(s)	219
Bpu1102I	GCTNAGC	1 cut(s)	1434
BpuEI	CTTGAG	4 cut(s)	119, 301, 716, 1475
BsaHI	GRCGYC	1 cut(s)	1644
BsaI	GGTCTC	2 cut(s)	785, 1511
BsaJI	CCNNGG	4 cut(s)	578, 654, 934, 1290
BsaXI	ACNNNNNCTCC	2 cut(s)	1187, 1217
Bsc4I	CCNNNNNNNGG	1 cut(s)	11
Bse118I	RCCGGY	1 cut(s)	68
Bse1I	ACTGG	1 cut(s)	1683
Bse3DI	GCAATG	4 cut(s)	26, 744, 1422, 1585
BseBI	CCWGG	1 cut(s)	579
BseDI	CCNNGG	4 cut(s)	578, 654, 934, 1290
BseGI	GGATG	6 cut(s)	31, 400, 505, 610, 718, 1216
BseLI	CCNNNNNNNGG	1 cut(s)	11
BseMI	GCAATG	4 cut(s)	26, 744, 1422, 1585
BseMII	CTCAG	4 cut(s)	210, 626, 866, 1368
BseNI	ACTGG	1 cut(s)	1683
BseRI	GAGGAG	1 cut(s)	1688
BseSI	GKGCMC	1 cut(s)	1375
BseXI	GCAGC	4 cut(s)	706, 735, 1417, 1439
BseYI	CCCAGC	1 cut(s)	806
BsgI	GTGCAG	1 cut(s)	734
Bsh1236I	CGCG	1 cut(s)	1236
BshFI	GGCC	5 cut(s)	68, 89, 401, 547, 871
BsiHKAI	GWGCWC	1 cut(s)	1375
BsiSI	CCGG	1 cut(s)	69
BslI	CCNNNNNNNGG	1 cut(s)	11
BsmAI	GTCTC	4 cut(s)	137, 284, 785, 1511
BsnI	GGCC	5 cut(s)	68, 89, 401, 547, 871
Bso31I	GGTCTC	2 cut(s)	785, 1511
Bsp1286I	GDGCHC	2 cut(s)	234, 1375
Bsp143I	GATC	3 cut(s)	817, 1348, 1597
Bsp1720I	GCTNAGC	1 cut(s)	1434
Bsp19I	CCATGG	1 cut(s)	934
BspACI	CCGC	6 cut(s)	169, 178, 497, 593, 716, 1234
BspANI	GGCC	5 cut(s)	68, 89, 401, 547, 871
BspCNI	CTCAG	4 cut(s)	211, 625, 867, 1369
BspFNI	CGCG	1 cut(s)	1236
BspHI	TCATGA	2 cut(s)	337, 1724
BspLI	GGNNCC	2 cut(s)	872, 1056
BspTNI	GGTCTC	2 cut(s)	785, 1511
BsrBI	CCGCTC	1 cut(s)	497
BsrDI	GCAATG	4 cut(s)	26, 744, 1422, 1585
BsrFI	RCCGGY	1 cut(s)	68
BsrI	ACTGG	1 cut(s)	1683
BssAI	RCCGGY	1 cut(s)	68
BssECI	CCNNGG	4 cut(s)	578, 654, 934, 1290
BssMI	GATC	3 cut(s)	817, 1348, 1597
BssNI	GRCGYC	1 cut(s)	1644
BssT1I	CCWWGG	3 cut(s)	654, 934, 1290
Bst2UI	CCWGG	1 cut(s)	579
Bst4CI	ACNGT	4 cut(s)	303, 689, 779, 1142
Bst6I	CTCTTC	4 cut(s)	41, 188, 1042, 1238
BstACI	GRCGYC	1 cut(s)	1644
BstC8I	GCNNGC	2 cut(s)	70, 1231
BstDEI	CTNAG	7 cut(s)	219, 612, 875, 1100, 1377, 1434, 1510
BstDSI	CCRYGG	1 cut(s)	934
BstF5I	GGATG	6 cut(s)	31, 400, 505, 610, 718, 1216
BstFNI	CGCG	1 cut(s)	1236
BstH2I	RGCGCY	1 cut(s)	1307
BstHHI	GCGC	1 cut(s)	1306
BstKTI	GATC	3 cut(s)	820, 1351, 1600
BstMAI	GTCTC	4 cut(s)	137, 284, 785, 1511
BstMBI	GATC	3 cut(s)	817, 1348, 1597
BstMWI	GCNNNNNNNGC	4 cut(s)	175, 238, 841, 1130
BstNI	CCWGG	1 cut(s)	579
BstNSI	RCATGY	2 cut(s)	214, 1163
BstSCI	CCNGG	1 cut(s)	577
BstSLI	GKGCMC	1 cut(s)	1375
BstUI	CGCG	1 cut(s)	1236
BstV1I	GCAGC	4 cut(s)	706, 735, 1417, 1439
BstXI	CCANNNNNNTGG	1 cut(s)	1297
BsuRI	GGCC	5 cut(s)	68, 89, 401, 547, 871
BtgI	CCRYGG	1 cut(s)	934
BtgZI	GCGATG	1 cut(s)	603
BtsCI	GGATG	6 cut(s)	31, 400, 505, 610, 718, 1216
BtsIMutI	CAGTG	2 cut(s)	698, 1590
Cac8I	GCNNGC	2 cut(s)	70, 1231
CaiI	CAGNNNCTG	1 cut(s)	767
CciI	TCATGA	2 cut(s)	337, 1724
CfoI	GCGC	1 cut(s)	1306
Cfr10I	RCCGGY	1 cut(s)	68
Cfr13I	GGNCC	2 cut(s)	31, 870
Csp6I	GTAC	3 cut(s)	199, 373, 462
CviQI	GTAC	3 cut(s)	199, 373, 462
DdeI	CTNAG	7 cut(s)	219, 612, 875, 1100, 1377, 1434, 1510
DpnI	GATC	3 cut(s)	819, 1350, 1599
DpnII	GATC	3 cut(s)	817, 1348, 1597
DraI	TTTAAA	1 cut(s)	1032
EaeI	YGGCCR	1 cut(s)	87
Eam1104I	CTCTTC	4 cut(s)	41, 188, 1042, 1238
EarI	CTCTTC	4 cut(s)	41, 188, 1042, 1238
Eco130I	CCWWGG	3 cut(s)	654, 934, 1290
Eco147I	AGGCCT	1 cut(s)	547
Eco24I	GRGCYC	1 cut(s)	234
Eco31I	GGTCTC	2 cut(s)	785, 1511
Eco47I	GGWCC	1 cut(s)	31
Eco47III	AGCGCT	1 cut(s)	1305
Eco57I	CTGAAG	1 cut(s)	975
EcoO109I	RGGNCCY	2 cut(s)	31, 870
EcoRII	CCWGG	1 cut(s)	577
EcoT14I	CCWWGG	3 cut(s)	654, 934, 1290
EcoT22I	ATGCAT	1 cut(s)	1537
EcoT38I	GRGCYC	1 cut(s)	234
ErhI	CCWWGG	3 cut(s)	654, 934, 1290
FalI	AAGNNNNNCTT	2 cut(s)	185, 217
Fnu4HI	GCNGC	6 cut(s)	717, 720, 749, 1234, 1428, 1431
FokI	GGATG	6 cut(s)	38, 407, 512, 617, 725, 1223
FriOI	GRGCYC	1 cut(s)	234
Fsp4HI	GCNGC	6 cut(s)	717, 720, 749, 1234, 1428, 1431
FspBI	CTAG	5 cut(s)	237, 897, 1059, 1619, 1653
GlaI	GCGC	1 cut(s)	1305
GluI	GCNGC	6 cut(s)	717, 720, 749, 1234, 1428, 1431
GsaI	CCCAGC	1 cut(s)	810
HaeII	RGCGCY	1 cut(s)	1307
HaeIII	GGCC	5 cut(s)	68, 89, 401, 547, 871
HapII	CCGG	1 cut(s)	69
HhaI	GCGC	1 cut(s)	1306
Hin1I	GRCGYC	1 cut(s)	1644
Hin6I	GCGC	1 cut(s)	1304
HinP1I	GCGC	1 cut(s)	1304
HindIII	AAGCTT	1 cut(s)	92
HinfI	GANTC	8 cut(s)	83, 507, 995, 1013, 1070, 1169, 1198, 1525
HpaII	CCGG	1 cut(s)	69
HphI	GGTGA	2 cut(s)	340, 1121
Hpy166II	GTNNAC	4 cut(s)	384, 829, 1112, 1373
Hpy188I	TCNGA	9 cut(s)	105, 258, 615, 759, 1000, 1012, 1316, 1602, 1689
Hpy188III	TCNNGA	9 cut(s)	80, 338, 521, 992, 1166, 1518, 1619, 1653, 1725
Hpy8I	GTNNAC	4 cut(s)	384, 829, 1112, 1373
HpyAV	CCTTC	4 cut(s)	103, 418, 995, 1252
HpyCH4III	ACNGT	4 cut(s)	303, 689, 779, 1142
HpyCH4IV	ACGT	1 cut(s)	1644
HpyF10VI	GCNNNNNNNGC	4 cut(s)	175, 238, 841, 1130
HpyF3I	CTNAG	7 cut(s)	219, 612, 875, 1100, 1377, 1434, 1510
HpySE526I	ACGT	1 cut(s)	1644
Hsp92I	GRCGYC	1 cut(s)	1644
HspAI	GCGC	1 cut(s)	1304
KroI	GCCGGC	1 cut(s)	68
KroNI	GCCGGC	1 cut(s)	70
Kzo9I	GATC	3 cut(s)	817, 1348, 1597
LmnI	GCTCC	2 cut(s)	124, 655
Lsp1109I	GCAGC	4 cut(s)	706, 735, 1417, 1439
LweI	GCATC	4 cut(s)	580, 703, 1111, 1523
MaeI	CTAG	5 cut(s)	237, 897, 1059, 1619, 1653
MaeII	ACGT	1 cut(s)	1644
MaeIII	GTNAC	4 cut(s)	346, 556, 1573, 1625
MalI	GATC	3 cut(s)	819, 1350, 1599
MbiI	CCGCTC	1 cut(s)	497
MboI	GATC	3 cut(s)	817, 1348, 1597
MboII	GAAGA	6 cut(s)	28, 205, 262, 1059, 1255, 1714
MhlI	GDGCHC	2 cut(s)	234, 1375
MluCI	AATT	8 cut(s)	113, 330, 661, 677, 858, 887, 1006, 1542
MlyI	GAGTC	3 cut(s)	92, 1207, 1519
MmeI	TCCRAC	3 cut(s)	267, 782, 1667
Mph1103I	ATGCAT	1 cut(s)	1537
MroNI	GCCGGC	1 cut(s)	68
MspA1I	CMGCKG	2 cut(s)	1118, 1430
MspI	CCGG	1 cut(s)	69
MspR9I	CCNGG	1 cut(s)	579
MvaI	CCWGG	1 cut(s)	579
MvnI	CGCG	1 cut(s)	1236
MwoI	GCNNNNNNNGC	4 cut(s)	175, 238, 841, 1130
NaeI	GCCGGC	1 cut(s)	70
NcoI	CCATGG	1 cut(s)	934
NdeII	GATC	3 cut(s)	817, 1348, 1597
NgoMIV	GCCGGC	1 cut(s)	68
NlaIV	GGNNCC	2 cut(s)	872, 1056
NmeAIII	GCCGAG	1 cut(s)	427
NmuCI	GTSAC	2 cut(s)	346, 556
NsiI	ATGCAT	1 cut(s)	1537
NspI	RCATGY	2 cut(s)	214, 1163
PagI	TCATGA	2 cut(s)	337, 1724
PceI	AGGCCT	1 cut(s)	547
PciI	ACATGT	1 cut(s)	210
PdiI	GCCGGC	1 cut(s)	70
PfeI	GAWTC	5 cut(s)	507, 995, 1013, 1070, 1169
PkrI	GCNGC	6 cut(s)	718, 721, 750, 1235, 1429, 1432
PleI	GAGTC	3 cut(s)	91, 1206, 1519
PpsI	GAGTC	3 cut(s)	91, 1206, 1519
PpuMI	RGGWCCY	1 cut(s)	31
PscI	ACATGT	1 cut(s)	210
PshBI	ATTAAT	2 cut(s)	333, 366
PsiI	TTATAA	2 cut(s)	249, 452
Psp5II	RGGWCCY	1 cut(s)	31
Psp6I	CCWGG	1 cut(s)	577
PspFI	CCCAGC	1 cut(s)	806
PspGI	CCWGG	1 cut(s)	577
PspN4I	GGNNCC	2 cut(s)	872, 1056
PspPI	GGNCC	2 cut(s)	31, 870
PspPPI	RGGWCCY	1 cut(s)	31
PstNI	CAGNNNCTG	1 cut(s)	767
PvuII	CAGCTG	2 cut(s)	1118, 1430
RsaI	GTAC	3 cut(s)	200, 374, 463
RsaNI	GTAC	3 cut(s)	199, 373, 462
SatI	GCNGC	6 cut(s)	717, 720, 749, 1234, 1428, 1431
Sau3AI	GATC	3 cut(s)	817, 1348, 1597
Sau96I	GGNCC	2 cut(s)	31, 870
SchI	GAGTC	3 cut(s)	92, 1207, 1519
ScrFI	CCNGG	1 cut(s)	579
SduI	GDGCHC	2 cut(s)	234, 1375
SfaNI	GCATC	4 cut(s)	580, 703, 1111, 1523
SinI	GGWCC	1 cut(s)	31
SmlI	CTYRAG	4 cut(s)	134, 280, 731, 1454
SmoI	CTYRAG	4 cut(s)	134, 280, 731, 1454
Sse9I	AATT	8 cut(s)	113, 330, 661, 677, 858, 887, 1006, 1542
SseBI	AGGCCT	1 cut(s)	547
SsiI	CCGC	6 cut(s)	169, 178, 497, 593, 716, 1234
SspMI	CTAG	5 cut(s)	237, 897, 1059, 1619, 1653
StuI	AGGCCT	1 cut(s)	547
StyD4I	CCNGG	1 cut(s)	577
StyI	CCWWGG	3 cut(s)	654, 934, 1290
TaaI	ACNGT	4 cut(s)	303, 689, 779, 1142
TaiI	ACGT	1 cut(s)	1647
TaqI	TCGA	3 cut(s)	309, 566, 820
TasI	AATT	8 cut(s)	113, 330, 661, 677, 858, 887, 1006, 1542
TauI	GCSGC	2 cut(s)	719, 1236
TfiI	GAWTC	5 cut(s)	507, 995, 1013, 1070, 1169
TscAI	CASTG	2 cut(s)	698, 1597
TseFI	GTSAC	2 cut(s)	346, 556
TseI	GCWGC	4 cut(s)	719, 748, 1427, 1430
Tsp45I	GTSAC	2 cut(s)	346, 556
TspDTI	ATGAA	9 cut(s)	28, 32, 122, 332, 542, 621, 992, 1256, 1713
TspRI	CASTG	2 cut(s)	698, 1597
VneI	GTGCAC	1 cut(s)	1371
VpaK11BI	GGWCC	1 cut(s)	31
VspI	ATTAAT	2 cut(s)	333, 366
XapI	RAATTY	1 cut(s)	1006
XbaI	TCTAGA	2 cut(s)	1618, 1652
XceI	RCATGY	2 cut(s)	214, 1163
XspI	CTAG	5 cut(s)	237, 897, 1059, 1619, 1653
ZraI	GACGTC	1 cut(s)	1645
Zsp2I	ATGCAT	1 cut(s)	1537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.