FvH4_6g10490

Solute carrier family 40 member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
6294428 .. 6298938
4511 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g10490.t3

Sequence Viewer

Length: 1551 bp
ATGAAGCAGGAGGAGAGTGAGAGCCTTCTGGCCCATGTACAAGAATACCCTCCTGATCATTCTCAATATGATCCCCTTCCTTCAACTCTGATCAGATATCTTTACATAGGCCACTTTTTGGCCAGATGGGGTGCCAGAATGTGGGAATTCTCTGTTGGTTTATACATGATAAATTTATGGCCAGACTCTCTGCTCTTTGCTGCTACATATGGTGTTGTCGAATCAGCCTCTACTGCGCTTTTTGGACCTTTGGTTGGACAGTGGGTGGATAAGTTATCATATGTAAAGATTCTTCGACTTTGGTTAGTAACACAAAATCTCTCTTTTATGATTGCTGGAGGCACTGTGATGGGGCTACTGATCTATCCAGATCTAAAGCTCACAAATTTCAGTGCATTTGTTTCACTTATCATATTAACCAACATCTCTGGAGCTCTTGGAGTTCTATCCACTCTTGCTGGTACCATCTTAGTCGAAAGAGACTGGGTTGTGGTAATATCAGAAGGACATTCTCCGGAAGTACTAACAAACATGAATTCCATCATTAGGCGTATTGATCTTTTCTCCAAGCTATGTGCTCCTGTGGTAACCGGCTTCATCATCAGCTTTGTATCACTTAAAGCTTCTGCTTTAACTTTAGCACTCTGGAATACCATATCTGTTTGGCTGGAATACTGGCTATTCATTTCTGTGTTTAATGGGATTCCAGCTTTAGGCGAAAGCAGCCAAAGGAAGATAACAAGACCTTCTCAGAGTGATCTTGAAGGCATTGGCGCATCTACTTCTCAAGAGAGAAGTAGCTTGCTTTCTAAAGATGAAAACGATTCAGATTTCGCCAAGGAAAGCTGGATTACGAGAGTTATTAAAATGGTATCAAGGATGCCTTATGTTAATGCTTGGAGTGTGTATTTGCAGCAAGATGTTGTACTACCTGGAGTATCTCTGGCTTTGTTATTTTTCACTGTGCTCAGCTTCGGAACGTTGATGACAGCTACCTTGGAATGGGAAGGCATACCTGTATACACCATTGGGATAGCTCGTGGAATAAGCGCCGCAATTGGAATTACTGCAACAATTGTTTATCCCATCTTGCAATCTCATATCTTAACACTTAGAACCGGACTCTGGTCTATCTGGTCTCAGTGGACCTTCCTCCTGTTATGTGTTGCTTCAATATGGATCCATAAGAGCCTTTGGTCAGCATATATGCTAATGGCCGGAGTGGCTACTTCTCGGCTTGGATTGTGGATGTTTGATTTAGCTGTCATCCAACAAATGCAGGATCAAGTTCCTGAATCAGATCGTTGTGTGGTGGGAGGTGTTCAAAACTCCCTTCAGTCCATCATGGATTTGCTGGGCTATGTCATGGGGCTAATCATATCTAATCCACAGGAATTCTGGAAGTTGACTTTGGTCTCGTTCGCCGTGGTAACACTGGCTGCATTGCTCTATACCCTGCACCTTTACCGCATCCGAAAACACCTCCTTCACTTTGAGAAATTAACCCCCTTTCTGAAATGCTTCACCGGTTCACAATCTAAAAATTCATAA

Protein Analysis

517

Amino Acids

57.69

Weight (kDa)

6.51

Isoelectric Point (pI)

37.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPN1 PF06963 31 - 467 3.1e-155 Ferroportin1 (FPN1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 461
AccB1I GGYRCC 2 cut(s) 131, 461
AccB7I CCANNNNNTGG 2 cut(s) 118, 141
AccI GTMKAC 1 cut(s) 1020
AccIII TCCGGA 1 cut(s) 514
AciI CCGC 2 cut(s) 1053, 1468
AclI AACGTT 1 cut(s) 980
AclWI GGATC 4 cut(s) 65, 1174, 1187, 1290
AcoI YGGCCR 3 cut(s) 120, 179, 1215
AcsI RAATTY 6 cut(s) 146, 172, 385, 535, 1394, 1543
AcuI CTGAAG 1 cut(s) 1319
AfaI GTAC 4 cut(s) 39, 463, 522, 927
AfiI CCNNNNNNNGG 7 cut(s) 118, 141, 254, 546, 713, 1002, 1125
AgeI ACCGGT 1 cut(s) 1526
AgsI TTSAA 4 cut(s) 84, 764, 1173, 1325
AjnI CCWGG 1 cut(s) 931
AjuI GAANNNNNNNTTGG 4 cut(s) 138, 170, 1394, 1426
Alw21I GWGCWC 3 cut(s) 436, 580, 969
Alw26I GTCTC 3 cut(s) 474, 1143, 1420
AlwI GGATC 4 cut(s) 65, 1174, 1187, 1290
Aor13HI TCCGGA 1 cut(s) 514
AoxI GGCC 5 cut(s) 30, 109, 120, 179, 1215
ApeKI GCWGC 4 cut(s) 200, 723, 913, 1439
ApoI RAATTY 6 cut(s) 146, 172, 385, 535, 1394, 1543
AsiGI ACCGGT 1 cut(s) 1526
Asp700I GAANNNNTTC 1 cut(s) 1520
Asp718I GGTACC 1 cut(s) 461
AspLEI GCGC 3 cut(s) 238, 776, 1052
AspS9I GGNCC 3 cut(s) 31, 245, 1146
AsuHPI GGTGA 1 cut(s) 1516
AvaII GGWCC 2 cut(s) 245, 1146
BalI TGGCCA 2 cut(s) 122, 181
BamHI GGATCC 1 cut(s) 1179
BanI GGYRCC 2 cut(s) 131, 461
BanII GRGCYC 1 cut(s) 436
BarI GAAGNNNNNNTAC 2 cut(s) 276, 308
BauI CACGAG 1 cut(s) 1038
Bbv12I GWGCWC 3 cut(s) 436, 580, 969
BbvI GCAGC 4 cut(s) 187, 735, 925, 1426
BccI CCATC 6 cut(s) 120, 343, 473, 548, 1094, 1349
BceAI ACGGC 1 cut(s) 1409
BciT130I CCWGG 1 cut(s) 933
BclI TGATCA 2 cut(s) 55, 90
BcoDI GTCTC 3 cut(s) 474, 1143, 1420
BfoI RGCGCY 1 cut(s) 1053
BglI GCCNNNNNGGC 1 cut(s) 1223
BglII AGATCT 1 cut(s) 370
BisI GCNGC 5 cut(s) 201, 724, 914, 1053, 1440
BlpI GCTNAGC 1 cut(s) 968
BlsI GCNGC 5 cut(s) 202, 725, 915, 1054, 1441
BmcAI AGTACT 1 cut(s) 522
Bme1390I CCNGG 1 cut(s) 933
Bme18I GGWCC 2 cut(s) 245, 1146
BmgT120I GGNCC 3 cut(s) 31, 245, 1146
BmiI GGNNCC 3 cut(s) 133, 463, 1181
BmrFI CCNGG 1 cut(s) 933
BmrI ACTGGG 1 cut(s) 493
BmsI GCATC 3 cut(s) 785, 870, 1479
BmuI ACTGGG 1 cut(s) 493
BoxI GACNNNNGTC 2 cut(s) 1126, 1412
BpmI CTGGAG 3 cut(s) 357, 450, 954
Bpu1102I GCTNAGC 1 cut(s) 968
BpuEI CTTGAG 1 cut(s) 771
BsaI GGTCTC 2 cut(s) 1143, 1420
BsaJI CCNNGG 3 cut(s) 837, 996, 1425
BsaWI WCCGGW 3 cut(s) 514, 1118, 1526
BsaXI ACNNNNNCTCC 2 cut(s) 330, 360
Bsc4I CCNNNNNNNGG 7 cut(s) 118, 141, 254, 546, 713, 1002, 1125
Bse118I RCCGGY 2 cut(s) 590, 1526
Bse1I ACTGG 3 cut(s) 488, 680, 1440
Bse3DI GCAATG 1 cut(s) 1442
BseAI TCCGGA 1 cut(s) 514
BseBI CCWGG 1 cut(s) 933
BseDI CCNNGG 3 cut(s) 837, 996, 1425
BseGI GGATG 4 cut(s) 885, 1254, 1266, 1470
BseLI CCNNNNNNNGG 7 cut(s) 118, 141, 254, 546, 713, 1002, 1125
BseMI GCAATG 1 cut(s) 1442
BseMII CTCAG 3 cut(s) 764, 982, 1154
BseNI ACTGG 3 cut(s) 488, 680, 1440
BseRI GAGGAG 1 cut(s) 26
BseXI GCAGC 4 cut(s) 187, 735, 925, 1426
BseYI CCCAGC 1 cut(s) 1354
BsgI GTGCAG 1 cut(s) 1442
BshFI GGCC 5 cut(s) 32, 111, 122, 181, 1217
BshNI GGYRCC 2 cut(s) 131, 461
BshTI ACCGGT 1 cut(s) 1526
BsiHKAI GWGCWC 3 cut(s) 436, 580, 969
BsiSI CCGG 5 cut(s) 515, 591, 1119, 1218, 1527
BslI CCNNNNNNNGG 7 cut(s) 118, 141, 254, 546, 713, 1002, 1125
BsmAI GTCTC 3 cut(s) 474, 1143, 1420
BsnI GGCC 5 cut(s) 32, 111, 122, 181, 1217
Bso31I GGTCTC 2 cut(s) 1143, 1420
Bsp1286I GDGCHC 3 cut(s) 436, 580, 969
Bsp13I TCCGGA 1 cut(s) 514
Bsp1407I TGTACA 1 cut(s) 37
Bsp1720I GCTNAGC 1 cut(s) 968
BspACI CCGC 2 cut(s) 1053, 1468
BspANI GGCC 5 cut(s) 32, 111, 122, 181, 1217
BspCNI CTCAG 3 cut(s) 763, 981, 1153
BspEI TCCGGA 1 cut(s) 514
BspLI GGNNCC 3 cut(s) 133, 463, 1181
BspPI GGATC 4 cut(s) 65, 1174, 1187, 1290
BspT107I GGYRCC 2 cut(s) 131, 461
BspTNI GGTCTC 2 cut(s) 1143, 1420
BsrDI GCAATG 1 cut(s) 1442
BsrFI RCCGGY 2 cut(s) 590, 1526
BsrGI TGTACA 1 cut(s) 37
BsrI ACTGG 3 cut(s) 488, 680, 1440
BssAI RCCGGY 2 cut(s) 590, 1526
BssECI CCNNGG 3 cut(s) 837, 996, 1425
BssNAI GTATAC 1 cut(s) 1021
BssSI CACGAG 1 cut(s) 1038
BssT1I CCWWGG 2 cut(s) 837, 996
Bst1107I GTATAC 1 cut(s) 1021
Bst2BI CACGAG 1 cut(s) 1038
Bst2UI CCWGG 1 cut(s) 933
Bst4CI ACNGT 3 cut(s) 261, 346, 964
BstAUI TGTACA 1 cut(s) 37
BstC8I GCNNGC 1 cut(s) 803
BstDEI CTNAG 5 cut(s) 469, 750, 968, 1112, 1140
BstDSI CCRYGG 1 cut(s) 1425
BstEII GGTNACC 1 cut(s) 586
BstF5I GGATG 4 cut(s) 885, 1254, 1266, 1470
BstH2I RGCGCY 1 cut(s) 1053
BstHHI GCGC 3 cut(s) 238, 776, 1052
BstMAI GTCTC 3 cut(s) 474, 1143, 1420
BstMWI GCNNNNNNNGC 3 cut(s) 233, 723, 1223
BstNI CCWGG 1 cut(s) 933
BstPAI GACNNNNGTC 2 cut(s) 1126, 1412
BstPI GGTNACC 1 cut(s) 586
BstSCI CCNGG 1 cut(s) 931
BstV1I GCAGC 4 cut(s) 187, 735, 925, 1426
BstX2I RGATCY 2 cut(s) 370, 1179
BstYI RGATCY 2 cut(s) 370, 1179
BstZ17I GTATAC 1 cut(s) 1021
BsuRI GGCC 5 cut(s) 32, 111, 122, 181, 1217
BtgI CCRYGG 1 cut(s) 1425
BtsCI GGATG 4 cut(s) 885, 1254, 1266, 1470
BtsIMutI CAGTG 6 cut(s) 266, 342, 397, 960, 1148, 1433
Cac8I GCNNGC 1 cut(s) 803
CfoI GCGC 3 cut(s) 238, 776, 1052
Cfr10I RCCGGY 2 cut(s) 590, 1526
Cfr13I GGNCC 3 cut(s) 31, 245, 1146
Csp6I GTAC 4 cut(s) 38, 462, 521, 926
CspAI ACCGGT 1 cut(s) 1526
CviAII CATG 5 cut(s) 35, 166, 532, 1345, 1366
CviQI GTAC 4 cut(s) 38, 462, 521, 926
DdeI CTNAG 5 cut(s) 469, 750, 968, 1112, 1140
EaeI YGGCCR 3 cut(s) 120, 179, 1215
Ecl136II GAGCTC 1 cut(s) 434
Eco130I CCWWGG 2 cut(s) 837, 996
Eco24I GRGCYC 1 cut(s) 436
Eco31I GGTCTC 2 cut(s) 1143, 1420
Eco32I GATATC 1 cut(s) 98
Eco47I GGWCC 2 cut(s) 245, 1146
Eco53kI GAGCTC 1 cut(s) 434
Eco57I CTGAAG 1 cut(s) 1319
Eco91I GGTNACC 1 cut(s) 586
EcoICRI GAGCTC 1 cut(s) 434
EcoO65I GGTNACC 1 cut(s) 586
EcoRI GAATTC 3 cut(s) 146, 535, 1394
EcoRII CCWGG 1 cut(s) 931
EcoRV GATATC 1 cut(s) 98
EcoT14I CCWWGG 2 cut(s) 837, 996
EcoT38I GRGCYC 1 cut(s) 436
ErhI CCWWGG 2 cut(s) 837, 996
FaeI CATG 5 cut(s) 38, 169, 535, 1348, 1369
FalI AAGNNNNNCTT 2 cut(s) 868, 900
FatI CATG 5 cut(s) 34, 165, 531, 1344, 1365
FauNDI CATATG 2 cut(s) 208, 280
FbaI TGATCA 2 cut(s) 55, 90
FblI GTMKAC 1 cut(s) 1020
Fnu4HI GCNGC 5 cut(s) 201, 724, 914, 1053, 1440
FokI GGATG 4 cut(s) 892, 1253, 1261, 1457
FriOI GRGCYC 1 cut(s) 436
Fsp4HI GCNGC 5 cut(s) 201, 724, 914, 1053, 1440
GlaI GCGC 3 cut(s) 237, 775, 1051
GluI GCNGC 5 cut(s) 201, 724, 914, 1053, 1440
GsaI CCCAGC 1 cut(s) 1358
GsuI CTGGAG 3 cut(s) 357, 450, 954
HaeII RGCGCY 1 cut(s) 1053
HaeIII GGCC 5 cut(s) 32, 111, 122, 181, 1217
HapII CCGG 5 cut(s) 515, 591, 1119, 1218, 1527
HhaI GCGC 3 cut(s) 238, 776, 1052
Hin1II CATG 5 cut(s) 38, 169, 535, 1348, 1369
Hin6I GCGC 3 cut(s) 236, 774, 1050
HinP1I GCGC 3 cut(s) 236, 774, 1050
HincII GTYRAC 1 cut(s) 1407
HindII GTYRAC 1 cut(s) 1407
HindIII AAGCTT 1 cut(s) 621
HinfI GANTC 7 cut(s) 185, 221, 289, 703, 824, 1122, 1295
HpaII CCGG 5 cut(s) 515, 591, 1119, 1218, 1527
HphI GGTGA 1 cut(s) 1516
Hpy166II GTNNAC 4 cut(s) 1021, 1146, 1407, 1532
Hpy188I TCNGA 9 cut(s) 90, 95, 502, 753, 829, 977, 1300, 1475, 1515
Hpy188III TCNNGA 9 cut(s) 53, 368, 429, 515, 646, 761, 788, 1292, 1399
Hpy8I GTNNAC 4 cut(s) 1021, 1146, 1407, 1532
HpyCH4III ACNGT 3 cut(s) 261, 346, 964
HpyCH4IV ACGT 1 cut(s) 980
HpyCH4V TGCA 7 cut(s) 395, 913, 1070, 1093, 1279, 1442, 1459
HpyF10VI GCNNNNNNNGC 3 cut(s) 233, 723, 1223
HpyF3I CTNAG 5 cut(s) 469, 750, 968, 1112, 1140
HpySE526I ACGT 1 cut(s) 980
Hsp92II CATG 5 cut(s) 38, 169, 535, 1348, 1369
HspAI GCGC 3 cut(s) 236, 774, 1050
Kpn2I TCCGGA 1 cut(s) 514
KpnI GGTACC 1 cut(s) 465
Ksp22I TGATCA 2 cut(s) 55, 90
LmnI GCTCC 2 cut(s) 431, 583
Lsp1109I GCAGC 4 cut(s) 187, 735, 925, 1426
LweI GCATC 3 cut(s) 785, 870, 1479
MaeII ACGT 1 cut(s) 980
MaeIII GTNAC 3 cut(s) 307, 586, 1429
MboII GAAGA 2 cut(s) 284, 745
MfeI CAATTG 2 cut(s) 1056, 1074
MflI RGATCY 2 cut(s) 370, 1179
MhlI GDGCHC 3 cut(s) 436, 580, 969
MlsI TGGCCA 2 cut(s) 122, 181
MluNI TGGCCA 2 cut(s) 122, 181
MlyI GAGTC 2 cut(s) 179, 1116
MmeI TCCRAC 2 cut(s) 235, 1294
MnlI CCTC 7 cut(s) 4, 60, 238, 332, 1163, 1310, 1493
Mox20I TGGCCA 2 cut(s) 122, 181
MroI TCCGGA 1 cut(s) 514
MroXI GAANNNNTTC 1 cut(s) 1520
MscI TGGCCA 2 cut(s) 122, 181
MseI TTAA 8 cut(s) 416, 618, 632, 696, 864, 891, 1106, 1502
MslI CAYNNNNRTG 2 cut(s) 347, 689
Msp20I TGGCCA 2 cut(s) 122, 181
MspI CCGG 5 cut(s) 515, 591, 1119, 1218, 1527
MspR9I CCNGG 1 cut(s) 933
MunI CAATTG 2 cut(s) 1056, 1074
MvaI CCWGG 1 cut(s) 933
MwoI GCNNNNNNNGC 3 cut(s) 233, 723, 1223
NdeI CATATG 2 cut(s) 208, 280
NlaIII CATG 5 cut(s) 38, 169, 535, 1348, 1369
NlaIV GGNNCC 3 cut(s) 133, 463, 1181
NmeAIII GCCGAG 1 cut(s) 1213
PdmI GAANNNNTTC 1 cut(s) 1520
PfeI GAWTC 5 cut(s) 221, 289, 703, 824, 1295
PflMI CCANNNNNTGG 2 cut(s) 118, 141
PinAI ACCGGT 1 cut(s) 1526
PkrI GCNGC 5 cut(s) 202, 725, 915, 1054, 1441
PleI GAGTC 2 cut(s) 179, 1116
PpsI GAGTC 2 cut(s) 179, 1116
PshAI GACNNNNGTC 2 cut(s) 1126, 1412
Psp124BI GAGCTC 1 cut(s) 436
Psp1406I AACGTT 1 cut(s) 980
Psp6I CCWGG 1 cut(s) 931
PspEI GGTNACC 1 cut(s) 586
PspFI CCCAGC 1 cut(s) 1354
PspGI CCWGG 1 cut(s) 931
PspN4I GGNNCC 3 cut(s) 133, 463, 1181
PspPI GGNCC 3 cut(s) 31, 245, 1146
PsuI RGATCY 2 cut(s) 370, 1179
RsaI GTAC 4 cut(s) 39, 463, 522, 927
RsaNI GTAC 4 cut(s) 38, 462, 521, 926
RseI CAYNNNNRTG 2 cut(s) 347, 689
SacI GAGCTC 1 cut(s) 436
SaqAI TTAA 8 cut(s) 416, 618, 632, 696, 864, 891, 1106, 1502
SatI GCNGC 5 cut(s) 201, 724, 914, 1053, 1440
Sau96I GGNCC 3 cut(s) 31, 245, 1146
ScaI AGTACT 1 cut(s) 522
SchI GAGTC 2 cut(s) 179, 1116
ScrFI CCNGG 1 cut(s) 933
SduI GDGCHC 3 cut(s) 436, 580, 969
SfaNI GCATC 3 cut(s) 785, 870, 1479
SinI GGWCC 2 cut(s) 245, 1146
SmiMI CAYNNNNRTG 2 cut(s) 347, 689
SmlI CTYRAG 1 cut(s) 786
SmoI CTYRAG 1 cut(s) 786
SsiI CCGC 2 cut(s) 1053, 1468
SstI GAGCTC 1 cut(s) 436
StyD4I CCNGG 1 cut(s) 931
StyI CCWWGG 2 cut(s) 837, 996
TaaI ACNGT 3 cut(s) 261, 346, 964
TaiI ACGT 1 cut(s) 983
TaqI TCGA 3 cut(s) 219, 295, 474
TatI WGTACW 3 cut(s) 37, 520, 925
TauI GCSGC 1 cut(s) 1055
TfiI GAWTC 5 cut(s) 221, 289, 703, 824, 1295
Tru1I TTAA 8 cut(s) 416, 618, 632, 696, 864, 891, 1106, 1502
Tru9I TTAA 8 cut(s) 416, 618, 632, 696, 864, 891, 1106, 1502
TscAI CASTG 6 cut(s) 266, 349, 397, 967, 1148, 1440
TseI GCWGC 4 cut(s) 200, 723, 913, 1439
TspDTI ATGAA 6 cut(s) 17, 548, 586, 673, 831, 1536
TspRI CASTG 6 cut(s) 266, 349, 397, 967, 1148, 1440
Van91I CCANNNNNTGG 2 cut(s) 118, 141
VpaK11BI GGWCC 2 cut(s) 245, 1146
XapI RAATTY 6 cut(s) 146, 172, 385, 535, 1394, 1543
XcmI CCANNNNNNNNNTGG 1 cut(s) 1395
XmiI GTMKAC 1 cut(s) 1020
XmnI GAANNNNTTC 1 cut(s) 1520
ZrmI AGTACT 1 cut(s) 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.