Rmu_ssc0000437.1_g000002

Solute carrier family 40 member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000437.1
Physical Location & Seq
Reverse (-)
3930 .. 6653
2724 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000437.1_g000002.1.cds

Sequence Viewer

Length: 1512 bp
atgaagcagcaactgacagaacccctcgtggcccgaccgcaagaacagccttctattcctcaatctgatcctgttccttcctttcttatcacatatctatacgtaggccacttcttggccagatggggtaccagaatgtgggacttctctgttggtttatacatgataaacatttggccagactctttactctttgctgctatatatggtgcagtagaatcagcttctactgcactttttggacccattattggacattgggtggacagatttccatattcaaaggttctccgaatttggctggtaacacagaacctctcttttgtgattgcgggaggcaccgtgatggcattactggtctatgcagatttgaagctcacaaatttttatgcattcgtctttctcataatcttaaccaacatctcaggagctgttggagttctttctactcttgctggtaccatcttagtcgaaagagactgggcggtggtgatatcagaagggcagtctccagaaatactgacaaagattaattcagtcatgaggcgtattgatctgttctgcaagctctgtgctcctgtcctaaccggattaattatcagcttcgtatcattagaagcttctgctttcactttagcactctggaatactatatctatttggctggaatattggctatttacttctgtatacaaggggattccggctttaggtgaaagcggccaaaggaagttatcaagatctttagagagtgatcagaacaagacaagaagtaacttgctttccagtgatgatgaagatgatgtagaaatttcccaagaaagatggataaagagaagaattaaacagttctcaaggattccatattttagtgcatggcgagtatacttgcagcaagatgtggtactccctggagtagctctggctttgttgtttggaacattaatgacagctaccttggaatgggaaggtatacctgcatacataattggaatagtgcgtggtgtaagcgctggagttggaattgctgcaacagtggtttatccaatcttgcaatctcatatcttaacacttagaactggactctggtccatctggtctcagtggacattcctcctactatgtgttggttcaatatgggtccccaatagagttttgtcagcatgtatgctgatggcaggagtaggtacttctcggcttggattatggatgtttgacttggcagtaatccaacaaatgcaggatcaagttcctgaattggaacgttgtgtggtgggaggtgttcaaagctcccttcagtcaagtatggatttgatggggtatgtcatggcaataattatatctaatccacaggatttctggaagttgactctggtgtcgttcggggtggtaacattggctgcattgctctacaccctacacctttaccgtgtccggaagcacctccttcactttgagaaacttactccgtttcttaattgcattactagatcacaatttgcaaatgtatag

Protein Analysis

503

Amino Acids

56.43

Weight (kDa)

8.14

Isoelectric Point (pI)

45.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1375
Acc36I ACCTGC 1 cut(s) 985
Acc65I GGTACC 2 cut(s) 128, 458
AccB1I GGYRCC 3 cut(s) 128, 338, 458
AccB7I CCANNNNNTGG 2 cut(s) 115, 138
AccI GTMKAC 3 cut(s) 690, 885, 973
AccIII TCCGGA 1 cut(s) 1434
AciI CCGC 4 cut(s) 38, 332, 485, 720
AclI AACGTT 1 cut(s) 1264
AclWI GGATC 2 cut(s) 62, 1251
AcoI YGGCCR 3 cut(s) 117, 176, 721
AcsI RAATTY 3 cut(s) 294, 382, 810
AcuI CTGAAG 1 cut(s) 1280
AfaI GTAC 4 cut(s) 130, 460, 906, 1189
AfeI AGCGCT 1 cut(s) 1012
AfiI CCNNNNNNNGG 5 cut(s) 115, 138, 251, 710, 963
AgsI TTSAA 4 cut(s) 282, 373, 1134, 1286
AjnI CCWGG 1 cut(s) 910
AluBI AGCT 9 cut(s) 224, 376, 431, 568, 603, 620, 920, 953, 1290
AluI AGCT 9 cut(s) 224, 376, 431, 568, 603, 620, 920, 953, 1290
Alw21I GWGCWC 1 cut(s) 577
Alw26I GTCTC 3 cut(s) 471, 513, 1104
AlwI GGATC 2 cut(s) 62, 1251
AlwNI CAGNNNCTG 2 cut(s) 13, 431
Aor13HI TCCGGA 1 cut(s) 1434
Aor51HI AGCGCT 1 cut(s) 1012
AoxI GGCC 5 cut(s) 30, 106, 117, 176, 721
ApeKI GCWGC 5 cut(s) 7, 197, 892, 1028, 1400
ApoI RAATTY 3 cut(s) 294, 382, 810
AseI ATTAAT 3 cut(s) 531, 593, 944
Asp718I GGTACC 2 cut(s) 128, 458
AspLEI GCGC 1 cut(s) 1013
AspS9I GGNCC 4 cut(s) 31, 242, 1089, 1141
AsuHPI GGTGA 2 cut(s) 502, 725
AvaII GGWCC 3 cut(s) 242, 1089, 1141
BalI TGGCCA 2 cut(s) 119, 178
BanI GGYRCC 3 cut(s) 128, 338, 458
BauI CACGAG 1 cut(s) 26
Bbv12I GWGCWC 1 cut(s) 577
BbvI GCAGC 5 cut(s) 19, 184, 904, 1015, 1387
BccI CCATC 7 cut(s) 117, 340, 470, 819, 1100, 1168, 1309
BciT130I CCWGG 1 cut(s) 912
BclI TGATCA 1 cut(s) 754
BcoDI GTCTC 3 cut(s) 471, 513, 1104
BfaI CTAG 1 cut(s) 1488
BfoI RGCGCY 1 cut(s) 1014
BfuAI ACCTGC 1 cut(s) 985
BglII AGATCT 1 cut(s) 740
BisI GCNGC 6 cut(s) 8, 198, 721, 893, 1029, 1401
BlsI GCNGC 6 cut(s) 9, 199, 722, 894, 1030, 1402
Bme1390I CCNGG 1 cut(s) 912
Bme18I GGWCC 3 cut(s) 242, 1089, 1141
BmgT120I GGNCC 4 cut(s) 31, 242, 1089, 1141
BmiI GGNNCC 6 cut(s) 130, 244, 340, 460, 1142, 1143
BmrFI CCNGG 1 cut(s) 912
BmrI ACTGGG 1 cut(s) 490
BmuI ACTGGG 1 cut(s) 490
BoxI GACNNNNGTC 1 cut(s) 1087
BpmI CTGGAG 3 cut(s) 495, 933, 1035
BpuEI CTTGAG 1 cut(s) 838
BsaAI YACGTR 1 cut(s) 103
BsaI GGTCTC 1 cut(s) 1104
BsaJI CCNNGG 2 cut(s) 910, 957
BsaWI WCCGGW 2 cut(s) 587, 1434
BsaXI ACNNNNNCTCC 2 cut(s) 327, 357
Bsc4I CCNNNNNNNGG 5 cut(s) 115, 138, 251, 710, 963
Bse1I ACTGG 4 cut(s) 360, 485, 786, 1084
Bse3DI GCAATG 1 cut(s) 1403
BseAI TCCGGA 1 cut(s) 1434
BseBI CCWGG 1 cut(s) 912
BseDI CCNNGG 2 cut(s) 910, 957
BseGI GGATG 1 cut(s) 1215
BseLI CCNNNNNNNGG 5 cut(s) 115, 138, 251, 710, 963
BseMI GCAATG 1 cut(s) 1403
BseMII CTCAG 2 cut(s) 438, 1115
BseNI ACTGG 4 cut(s) 360, 485, 786, 1084
BseXI GCAGC 5 cut(s) 19, 184, 904, 1015, 1387
BsgI GTGCAG 2 cut(s) 216, 231
Bsh1285I CGRYCG 1 cut(s) 38
BshFI GGCC 5 cut(s) 32, 108, 119, 178, 723
BshNI GGYRCC 3 cut(s) 128, 338, 458
BsiEI CGRYCG 1 cut(s) 38
BsiHKAI GWGCWC 1 cut(s) 577
BsiSI CCGG 3 cut(s) 588, 704, 1435
BslFI GGGAC 2 cut(s) 155, 1127
BslI CCNNNNNNNGG 5 cut(s) 115, 138, 251, 710, 963
BsmAI GTCTC 3 cut(s) 471, 513, 1104
BsmFI GGGAC 2 cut(s) 155, 1127
BsmI GAATGC 1 cut(s) 392
BsnI GGCC 5 cut(s) 32, 108, 119, 178, 723
Bso31I GGTCTC 1 cut(s) 1104
Bsp1286I GDGCHC 1 cut(s) 577
Bsp13I TCCGGA 1 cut(s) 1434
Bsp143I GATC 6 cut(s) 67, 553, 740, 754, 1243, 1490
BspACI CCGC 4 cut(s) 38, 332, 485, 720
BspANI GGCC 5 cut(s) 32, 108, 119, 178, 723
BspCNI CTCAG 2 cut(s) 437, 1114
BspEI TCCGGA 1 cut(s) 1434
BspHI TCATGA 1 cut(s) 540
BspLI GGNNCC 6 cut(s) 130, 244, 340, 460, 1142, 1143
BspMI ACCTGC 1 cut(s) 985
BspPI GGATC 2 cut(s) 62, 1251
BspT107I GGYRCC 3 cut(s) 128, 338, 458
BspTNI GGTCTC 1 cut(s) 1104
BsrDI GCAATG 1 cut(s) 1403
BsrI ACTGG 4 cut(s) 360, 485, 786, 1084
BssECI CCNNGG 2 cut(s) 910, 957
BssMI GATC 6 cut(s) 67, 553, 740, 754, 1243, 1490
BssNAI GTATAC 3 cut(s) 691, 886, 974
BssSI CACGAG 1 cut(s) 26
BssT1I CCWWGG 1 cut(s) 957
Bst1107I GTATAC 3 cut(s) 691, 886, 974
Bst2BI CACGAG 1 cut(s) 26
Bst2UI CCWGG 1 cut(s) 912
Bst4CI ACNGT 4 cut(s) 343, 849, 1036, 1430
BstBAI YACGTR 1 cut(s) 103
BstC8I GCNNGC 1 cut(s) 566
BstDEI CTNAG 4 cut(s) 424, 466, 1073, 1101
BstF5I GGATG 1 cut(s) 1215
BstH2I RGCGCY 1 cut(s) 1014
BstHHI GCGC 1 cut(s) 1013
BstKTI GATC 6 cut(s) 70, 556, 743, 757, 1246, 1493
BstMAI GTCTC 3 cut(s) 471, 513, 1104
BstMBI GATC 6 cut(s) 67, 553, 740, 754, 1243, 1490
BstMCI CGRYCG 1 cut(s) 38
BstMWI GCNNNNNNNGC 2 cut(s) 46, 230
BstNI CCWGG 1 cut(s) 912
BstNSI RCATGY 1 cut(s) 1167
BstPAI GACNNNNGTC 1 cut(s) 1087
BstSCI CCNGG 1 cut(s) 910
BstSNI TACGTA 1 cut(s) 103
BstV1I GCAGC 5 cut(s) 19, 184, 904, 1015, 1387
BstX2I RGATCY 1 cut(s) 740
BstYI RGATCY 1 cut(s) 740
BstZ17I GTATAC 3 cut(s) 691, 886, 974
BsuRI GGCC 5 cut(s) 32, 108, 119, 178, 723
BtsCI GGATG 1 cut(s) 1215
BtsIMutI CAGTG 3 cut(s) 793, 1041, 1109
BveI ACCTGC 1 cut(s) 985
Cac8I GCNNGC 1 cut(s) 566
CaiI CAGNNNCTG 2 cut(s) 13, 431
CciI TCATGA 1 cut(s) 540
CfoI GCGC 1 cut(s) 1013
Cfr13I GGNCC 4 cut(s) 31, 242, 1089, 1141
Csp6I GTAC 4 cut(s) 129, 459, 905, 1188
CviAII CATG 5 cut(s) 163, 541, 876, 1164, 1327
CviQI GTAC 4 cut(s) 129, 459, 905, 1188
DdeI CTNAG 4 cut(s) 424, 466, 1073, 1101
DpnI GATC 6 cut(s) 69, 555, 742, 756, 1245, 1492
DpnII GATC 6 cut(s) 67, 553, 740, 754, 1243, 1490
DrdI GACNNNNNNGTC 1 cut(s) 1375
DseDI GACNNNNNNGTC 1 cut(s) 1375
EaeI YGGCCR 3 cut(s) 117, 176, 721
Eco105I TACGTA 1 cut(s) 103
Eco130I CCWWGG 1 cut(s) 957
Eco31I GGTCTC 1 cut(s) 1104
Eco32I GATATC 1 cut(s) 495
Eco47I GGWCC 3 cut(s) 242, 1089, 1141
Eco47III AGCGCT 1 cut(s) 1012
Eco57I CTGAAG 1 cut(s) 1280
EcoO109I RGGNCCY 1 cut(s) 1141
EcoRII CCWGG 1 cut(s) 910
EcoRV GATATC 1 cut(s) 495
EcoT14I CCWWGG 1 cut(s) 957
EcoT22I ATGCAT 1 cut(s) 394
ErhI CCWWGG 1 cut(s) 957
FaeI CATG 5 cut(s) 166, 544, 879, 1167, 1330
FaqI GGGAC 2 cut(s) 155, 1127
FatI CATG 5 cut(s) 162, 540, 875, 1163, 1326
FauI CCCGC 1 cut(s) 325
FbaI TGATCA 1 cut(s) 754
FblI GTMKAC 3 cut(s) 690, 885, 973
Fnu4HI GCNGC 6 cut(s) 8, 198, 721, 893, 1029, 1401
FokI GGATG 1 cut(s) 1222
Fsp4HI GCNGC 6 cut(s) 8, 198, 721, 893, 1029, 1401
FspBI CTAG 1 cut(s) 1488
GlaI GCGC 1 cut(s) 1012
GluI GCNGC 6 cut(s) 8, 198, 721, 893, 1029, 1401
GsuI CTGGAG 3 cut(s) 495, 933, 1035
HaeII RGCGCY 1 cut(s) 1014
HaeIII GGCC 5 cut(s) 32, 108, 119, 178, 723
HapII CCGG 3 cut(s) 588, 704, 1435
HhaI GCGC 1 cut(s) 1013
Hin1II CATG 5 cut(s) 166, 544, 879, 1167, 1330
Hin6I GCGC 1 cut(s) 1011
HinP1I GCGC 1 cut(s) 1011
HincII GTYRAC 1 cut(s) 1368
HindII GTYRAC 1 cut(s) 1368
HindIII AAGCTT 1 cut(s) 618
HinfI GANTC 6 cut(s) 182, 218, 700, 859, 1083, 1369
HpaII CCGG 3 cut(s) 588, 704, 1435
HphI GGTGA 2 cut(s) 502, 725
Hpy166II GTNNAC 6 cut(s) 265, 691, 886, 974, 1107, 1368
Hpy188I TCNGA 4 cut(s) 67, 293, 499, 759
Hpy188III TCNNGA 8 cut(s) 426, 512, 541, 643, 738, 1253, 1360, 1435
Hpy8I GTNNAC 6 cut(s) 265, 691, 886, 974, 1107, 1368
HpyAV CCTTC 6 cut(s) 60, 87, 494, 962, 1304, 1457
HpyCH4III ACNGT 4 cut(s) 343, 849, 1036, 1430
HpyCH4IV ACGT 2 cut(s) 102, 1264
HpyF10VI GCNNNNNNNGC 2 cut(s) 46, 230
HpyF3I CTNAG 4 cut(s) 424, 466, 1073, 1101
HpySE526I ACGT 2 cut(s) 102, 1264
Hsp92II CATG 5 cut(s) 166, 544, 879, 1167, 1330
HspAI GCGC 1 cut(s) 1011
KflI GGGWCCC 1 cut(s) 1141
Kpn2I TCCGGA 1 cut(s) 1434
KpnI GGTACC 2 cut(s) 132, 462
Ksp22I TGATCA 1 cut(s) 754
Kzo9I GATC 6 cut(s) 67, 553, 740, 754, 1243, 1490
LmnI GCTCC 3 cut(s) 428, 580, 1295
Lsp1109I GCAGC 5 cut(s) 19, 184, 904, 1015, 1387
MaeI CTAG 1 cut(s) 1488
MaeII ACGT 2 cut(s) 102, 1264
MaeIII GTNAC 3 cut(s) 304, 773, 1390
MalI GATC 6 cut(s) 69, 555, 742, 756, 1245, 1492
MboI GATC 6 cut(s) 67, 553, 740, 754, 1243, 1490
MboII GAAGA 2 cut(s) 809, 849
MflI RGATCY 1 cut(s) 740
MhlI GDGCHC 1 cut(s) 577
MlsI TGGCCA 2 cut(s) 119, 178
MluNI TGGCCA 2 cut(s) 119, 178
MlyI GAGTC 3 cut(s) 176, 1077, 1363
MmeI TCCRAC 3 cut(s) 415, 1000, 1255
MnlI CCTC 8 cut(s) 35, 69, 326, 329, 537, 1124, 1271, 1454
Mox20I TGGCCA 2 cut(s) 119, 178
Mph1103I ATGCAT 1 cut(s) 394
MroI TCCGGA 1 cut(s) 1434
MscI TGGCCA 2 cut(s) 119, 178
MseI TTAA 7 cut(s) 413, 531, 593, 843, 944, 1067, 1476
MslI CAYNNNNRTG 1 cut(s) 344
Msp20I TGGCCA 2 cut(s) 119, 178
MspI CCGG 3 cut(s) 588, 704, 1435
MspR9I CCNGG 1 cut(s) 912
Mva1269I GAATGC 1 cut(s) 392
MvaI CCWGG 1 cut(s) 912
MwoI GCNNNNNNNGC 2 cut(s) 46, 230
NdeII GATC 6 cut(s) 67, 553, 740, 754, 1243, 1490
NlaIII CATG 5 cut(s) 166, 544, 879, 1167, 1330
NlaIV GGNNCC 6 cut(s) 130, 244, 340, 460, 1142, 1143
NmeAIII GCCGAG 1 cut(s) 1174
NsiI ATGCAT 1 cut(s) 394
NspI RCATGY 1 cut(s) 1167
PagI TCATGA 1 cut(s) 540
PctI GAATGC 1 cut(s) 392
PfeI GAWTC 3 cut(s) 218, 700, 859
PflMI CCANNNNNTGG 2 cut(s) 115, 138
PkrI GCNGC 6 cut(s) 9, 199, 722, 894, 1030, 1402
PleI GAGTC 3 cut(s) 176, 1077, 1363
PpsI GAGTC 3 cut(s) 176, 1077, 1363
Ppu21I YACGTR 1 cut(s) 103
PpuMI RGGWCCY 1 cut(s) 1141
PshAI GACNNNNGTC 1 cut(s) 1087
PshBI ATTAAT 3 cut(s) 531, 593, 944
Psp1406I AACGTT 1 cut(s) 1264
Psp5II RGGWCCY 1 cut(s) 1141
Psp6I CCWGG 1 cut(s) 910
PspGI CCWGG 1 cut(s) 910
PspN4I GGNNCC 6 cut(s) 130, 244, 340, 460, 1142, 1143
PspPI GGNCC 4 cut(s) 31, 242, 1089, 1141
PspPPI RGGWCCY 1 cut(s) 1141
PstNI CAGNNNCTG 2 cut(s) 13, 431
PsuI RGATCY 1 cut(s) 740
RsaI GTAC 4 cut(s) 130, 460, 906, 1189
RsaNI GTAC 4 cut(s) 129, 459, 905, 1188
RseI CAYNNNNRTG 1 cut(s) 344
SaqAI TTAA 7 cut(s) 413, 531, 593, 843, 944, 1067, 1476
SatI GCNGC 6 cut(s) 8, 198, 721, 893, 1029, 1401
Sau3AI GATC 6 cut(s) 67, 553, 740, 754, 1243, 1490
Sau96I GGNCC 4 cut(s) 31, 242, 1089, 1141
SchI GAGTC 3 cut(s) 176, 1077, 1363
ScrFI CCNGG 1 cut(s) 912
SduI GDGCHC 1 cut(s) 577
SinI GGWCC 3 cut(s) 242, 1089, 1141
SmiMI CAYNNNNRTG 1 cut(s) 344
SmlI CTYRAG 1 cut(s) 853
SmoI CTYRAG 1 cut(s) 853
SnaBI TACGTA 1 cut(s) 103
SsiI CCGC 4 cut(s) 38, 332, 485, 720
SspI AATATT 1 cut(s) 671
SspMI CTAG 1 cut(s) 1488
StyD4I CCNGG 1 cut(s) 910
StyI CCWWGG 1 cut(s) 957
TaaI ACNGT 4 cut(s) 343, 849, 1036, 1430
TaiI ACGT 2 cut(s) 105, 1267
TaqI TCGA 1 cut(s) 471
TauI GCSGC 1 cut(s) 723
TfiI GAWTC 3 cut(s) 218, 700, 859
Tru1I TTAA 7 cut(s) 413, 531, 593, 843, 944, 1067, 1476
Tru9I TTAA 7 cut(s) 413, 531, 593, 843, 944, 1067, 1476
TscAI CASTG 3 cut(s) 793, 1041, 1109
TseI GCWGC 5 cut(s) 7, 197, 892, 1028, 1400
TspDTI ATGAA 2 cut(s) 17, 810
TspGWI ACGGA 1 cut(s) 1458
TspRI CASTG 3 cut(s) 793, 1041, 1109
Van91I CCANNNNNTGG 2 cut(s) 115, 138
VpaK11BI GGWCC 3 cut(s) 242, 1089, 1141
VspI ATTAAT 3 cut(s) 531, 593, 944
XapI RAATTY 3 cut(s) 294, 382, 810
XceI RCATGY 1 cut(s) 1167
XcmI CCANNNNNNNNNTGG 1 cut(s) 1356
XmiI GTMKAC 3 cut(s) 690, 885, 973
XspI CTAG 1 cut(s) 1488
Zsp2I ATGCAT 1 cut(s) 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.