Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0001138

Physical Location & Seq

Genomic Coordinates Reverse (-)

19370450 .. 19376211

Gene Structure 5762 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g17080.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGGAGGAAGTGAGAGAGCCCCTTTTATCCCGAGTGCAAGAACAGCCTCCTAATCCAAAAGATGATGGAGTTCCTCCTCATCTAATCAGATATCTCTACTTTGGCCACTTTTTATCCAGATGGGGCACCAGGGTGTGGGAATTTTCTGTTGGTTTATACATGATAAGCATTTGGCCCGACTCCCTACTCTTCGCTGCTATCTATGGAGCGGTGGAATCAGCCTCCACCGCGCTTTTCGGACCCTTAGTTGGACACTGGGTGGATAGATTTACATATATAAAGGTTCTCCGGCTTTGGTTGGTAACACAAAATCTCTCTTCTATTATTGCTGGAGGCACTGTGATGGCATTACTGGTCTACTCTGATTTAAACCGCACAAATTTTCATGCGTTCATCATGCTAGTAATATTAACCAACGTCGCAGGAGCTGTTGGAGTTACTTCTACTCTCGCCGGCACCATCTTAGTTGAAAGAGACTGGGTGGTGGTGATATCGGAAAGCCATTCTAATCCAGAAATACTGACAAAAATGAACTCGGTCCTTCGGCGTATCGATCTCTTCTGCAAGCTATGTGCTCCTGTGCTAACTGGCTTCATTATCAGCTTTGTGTCCCTAAAGGCTTCTGCTTTAACTTTAGCACTCTGGCACACTACAACTATCTGGTTGGAATACTGGCTTTTCATGTCTGTATACAAGGGGATTCCGGCTCTAGGCGAAAGCAGCCAACGGAAGATATCAATGCCTTCAAGAAGTGATGTGTCTACTGATGGTCAGGAGACAAGCAGCTTGCTTTCTCATGATAAAAACGATTTGGAACCGGCCAAGGTAAGCTGGATTAAGAGAGTAACTGAAATGGTCTCAAGGATCCCTTATGTGGCTGCATGGAGAGTGTATTTGCAGCAAGATGTTGTGCTCCCTGGTGTTGCTCTGTCTCTGTTATTTTTTACTGTGCTTAGCTTTGGGACATTGATGACAGCTACACTTGAATGGGAAGGCATACCTGCATATGTCATTGGGATAGCACGTGGAATCAGTGCTGCAATTGGAATTGCTGCAACAATTCTGTACCCTATAGTGCAATCTCATATTCTAAAACTCAGAACCGGACTTTGGTCGATCTGGTCTCAGTGGACCTTCCTCCTACTGTGTGTTGCTTCAATTTGGATATCTAATAGCAACTTATCAGCATATATGCTGATGGCAGGAGTGGCTGCTTCTAGGCTTGGATTGTGGATGTTTGATTTAGCGGTAATCCAACAAATGCAGGATCGAGTTCCTGAATCGGATCGATGTGTAGTGGGAGGTGTTCAAAACTCCCTTCAGTCAATTATGGATCTGATGGGTTATGTCATGGGAATAATCGTCTCTAATCCACAGGATTTTTGGAAGTTGACTTTGCTGTCTTTTGGTGTGGTGACATTGGCTGCATTGCTCTATACTCTGCACCTCTACCGCATCAGAAAGCACCTCATTCACTTTGAGAAGTTATATGCCATTTTTAAATGTTTTACAACATCATCACAATCTGCAAGTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0000325 GO:0003674 GO:0005215 GO:0005381 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006824 GO:0006826 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0007154 GO:0008150 GO:0008324 GO:0009267 GO:0009605 GO:0009705 GO:0009987 GO:0009991 GO:0010106 GO:0015075 GO:0015087 GO:0015318 GO:0015675 GO:0016020 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031090 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034220 GO:0034755 GO:0035444 GO:0042592 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0046916 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055068 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071496 GO:0071944 GO:0072511 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04216 ko04978 map04216 map04978

Pfam Domains

Protein Families

FPN1

Protein Analysis

513

Amino Acids

57.23

Weight (kDa)

8.47

Isoelectric Point (pI)

35.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001138)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38460 AT2G38460 AT2G38460 AT2G38460 AT2G38460 AT2G38460 AT2G38460 AT2G38460 AT5G03570 AT5G03570 AT5G03570 AT5G03570
fragaria_vesca	FvH4_6g10490 FvH4_6g10490 FvH4_6g10490
malus_domestica	MD12G1181400.v1.1
prunus_persica	Prupe.6G286200_v2.0.a1 Prupe.6G286200_v2.0.a1 Prupe.6G286200_v2.0.a1
pyrus_communis	pycom12g17080
rosa_chinensis	RchiOBHm_Chr3g0461441 RchiOBHm_Chr3g0461451 RchiOBHm_Chr6g0247161
rosa_laevigata	RLG00000015217 RLG00000024933 RLG00000024934
rosa_multiflora	Rmu_sc0002677.1_g000013 Rmu_ssc0000437.1_g000002
rosa_roxburghii	Rroxscaffold_6G00418280 Rroxscaffold_6G00418310 Rroxscaffold_6G00418600 Rroxscaffold_6G00418610 Rroxscaffold_7G00214300
rosa_rugosa	Rorug03G0050300 Rorug03G0050400 Rorug03G0050500 Rorug03G0050600 Rorug03G0050700 Rorug03G0050800 Rorug05G0523400.1 Rorug05G0523500 Rorug05G0523600 Rorug05G0523700.1 Rorug05G0523800 Rorug05G0523800
rosa_samantha	Rh3AG108500 Rh3AG108600 Rh3BG112300 Rh3BG112400 Rh3CG114000 Rh3DG113900 Rh3DG114000 Rh6AG038100 Rh6BG033000 Rh6CG033700 Rh6DG031400
rosa_wichuraiana	Rw3G009230 Rw6G003250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1399
Acc36I	ACCTGC	1 cut(s)	1009
AccB1I	GGYRCC	2 cut(s)	125, 455
AccB7I	CCANNNNNTGG	1 cut(s)	135
AccBSI	CCGCTC	1 cut(s)	209
AccI	GTMKAC	3 cut(s)	357, 690, 761
AccII	CGCG	1 cut(s)	230
AciI	CCGC	5 cut(s)	209, 228, 373, 1247, 1453
AclWI	GGATC	5 cut(s)	859, 872, 1275, 1293, 1341
AcoI	YGGCCR	2 cut(s)	103, 819
AcsI	RAATTY	2 cut(s)	140, 379
AcuI	CTGAAG	1 cut(s)	1304
AcvI	CACGTG	1 cut(s)	1025
AdeI	CACNNNGTG	1 cut(s)	259
AfaI	GTAC	1 cut(s)	1067
AfiI	CCNNNNNNNGG	5 cut(s)	135, 248, 710, 874, 1110
AgsI	TTSAA	5 cut(s)	470, 747, 986, 1158, 1310
AjnI	CCWGG	2 cut(s)	128, 916
AjuI	GAANNNNNNNTTGG	4 cut(s)	132, 164, 1093, 1125
AleI	CACNNNNGTG	1 cut(s)	131
AluBI	AGCT	7 cut(s)	428, 568, 603, 786, 831, 957, 977
AluI	AGCT	7 cut(s)	428, 568, 603, 786, 831, 957, 977
Alw21I	GWGCWC	2 cut(s)	577, 915
Alw26I	GTCTC	6 cut(s)	468, 770, 862, 936, 1128, 1369
AlwI	GGATC	5 cut(s)	859, 872, 1275, 1293, 1341
AlwNI	CAGNNNCTG	1 cut(s)	428
Ama87I	CYCGRG	1 cut(s)	30
AoxI	GGCC	3 cut(s)	103, 173, 819
ApeKI	GCWGC	9 cut(s)	194, 720, 783, 878, 898, 1037, 1052, 1211, 1424
ApoI	RAATTY	2 cut(s)	140, 379
AspLEI	GCGC	1 cut(s)	232
AspS9I	GGNCC	4 cut(s)	174, 239, 538, 1131
AsuHPI	GGTGA	2 cut(s)	499, 1426
AvaI	CYCGRG	1 cut(s)	30
AvaII	GGWCC	3 cut(s)	239, 538, 1131
BaeGI	GKGCMC	1 cut(s)	128
BalI	TGGCCA	1 cut(s)	105
BamHI	GGATCC	1 cut(s)	864
BanI	GGYRCC	2 cut(s)	125, 455
BanII	GRGCYC	1 cut(s)	21
BbrPI	CACGTG	1 cut(s)	1025
Bbv12I	GWGCWC	2 cut(s)	577, 915
BbvI	GCAGC	9 cut(s)	181, 732, 795, 865, 910, 1024, 1039, 1198, 1411
BccI	CCATC	7 cut(s)	59, 114, 337, 467, 761, 1192, 1333
BciT130I	CCWGG	2 cut(s)	130, 918
BcoDI	GTCTC	6 cut(s)	468, 770, 862, 936, 1128, 1369
BfaI	CTAG	3 cut(s)	401, 710, 1218
BfmI	CTRYAG	1 cut(s)	1071
BfuAI	ACCTGC	1 cut(s)	1009
BisI	GCNGC	9 cut(s)	195, 721, 784, 879, 899, 1038, 1053, 1212, 1425
BlpI	GCTNAGC	1 cut(s)	953
BlsI	GCNGC	9 cut(s)	196, 722, 785, 880, 900, 1039, 1054, 1213, 1426
Bme1390I	CCNGG	2 cut(s)	130, 918
Bme18I	GGWCC	3 cut(s)	239, 538, 1131
BmeT110I	CYCGRG	1 cut(s)	30
BmgT120I	GGNCC	4 cut(s)	174, 239, 538, 1131
BmiI	GGNNCC	5 cut(s)	127, 241, 457, 816, 866
BmrFI	CCNGG	2 cut(s)	130, 918
BmrI	ACTGGG	2 cut(s)	265, 487
BmsI	GCATC	1 cut(s)	1464
BmuI	ACTGGG	2 cut(s)	265, 487
BoxI	GACNNNNGTC	1 cut(s)	1111
BpmI	CTGGAG	1 cut(s)	351
Bpu1102I	GCTNAGC	1 cut(s)	953
BpuEI	CTTGAG	1 cut(s)	844
Bsa29I	ATCGAT	2 cut(s)	552, 1288
BsaAI	YACGTR	1 cut(s)	1025
BsaI	GGTCTC	2 cut(s)	862, 1128
BsaJI	CCNNGG	3 cut(s)	129, 822, 916
BsaWI	WCCGGW	1 cut(s)	1103
BsaXI	ACNNNNNCTCC	2 cut(s)	324, 354
Bsc4I	CCNNNNNNNGG	5 cut(s)	135, 248, 710, 874, 1110
Bse118I	RCCGGY	2 cut(s)	452, 817
Bse1I	ACTGG	5 cut(s)	260, 357, 482, 592, 677
Bse3DI	GCAATG	1 cut(s)	1427
BseBI	CCWGG	2 cut(s)	130, 918
BseCI	ATCGAT	2 cut(s)	552, 1288
BseDI	CCNNGG	3 cut(s)	129, 822, 916
BseGI	GGATG	1 cut(s)	1239
BseLI	CCNNNNNNNGG	5 cut(s)	135, 248, 710, 874, 1110
BseMI	GCAATG	1 cut(s)	1427
BseMII	CTCAG	2 cut(s)	1111, 1139
BseNI	ACTGG	5 cut(s)	260, 357, 482, 592, 677
BseRI	GAGGAG	1 cut(s)	66
BseSI	GKGCMC	1 cut(s)	128
BseXI	GCAGC	9 cut(s)	181, 732, 795, 865, 910, 1024, 1039, 1198, 1411
BsgI	GTGCAG	1 cut(s)	1427
Bsh1236I	CGCG	1 cut(s)	230
BshFI	GGCC	3 cut(s)	105, 175, 821
BshNI	GGYRCC	2 cut(s)	125, 455
BshVI	ATCGAT	2 cut(s)	552, 1288
BsiHKAI	GWGCWC	2 cut(s)	577, 915
BsiHKCI	CYCGRG	1 cut(s)	30
BsiSI	CCGG	5 cut(s)	289, 453, 704, 818, 1104
BslFI	GGGAC	2 cut(s)	595, 976
BslI	CCNNNNNNNGG	5 cut(s)	135, 248, 710, 874, 1110
BsmAI	GTCTC	6 cut(s)	468, 770, 862, 936, 1128, 1369
BsmBI	CGTCTC	1 cut(s)	1369
BsmFI	GGGAC	2 cut(s)	595, 976
BsnI	GGCC	3 cut(s)	105, 175, 821
Bso31I	GGTCTC	2 cut(s)	862, 1128
BsoBI	CYCGRG	1 cut(s)	30
Bsp1286I	GDGCHC	4 cut(s)	21, 128, 577, 915
Bsp143I	GATC	6 cut(s)	553, 864, 1116, 1267, 1285, 1333
Bsp1720I	GCTNAGC	1 cut(s)	953
BspACI	CCGC	5 cut(s)	209, 228, 373, 1247, 1453
BspANI	GGCC	3 cut(s)	105, 175, 821
BspCNI	CTCAG	2 cut(s)	1110, 1138
BspDI	ATCGAT	2 cut(s)	552, 1288
BspFNI	CGCG	1 cut(s)	230
BspHI	TCATGA	1 cut(s)	796
BspLI	GGNNCC	5 cut(s)	127, 241, 457, 816, 866
BspMI	ACCTGC	1 cut(s)	1009
BspPI	GGATC	5 cut(s)	859, 872, 1275, 1293, 1341
BspT107I	GGYRCC	2 cut(s)	125, 455
BspTNI	GGTCTC	2 cut(s)	862, 1128
BsrBI	CCGCTC	1 cut(s)	209
BsrDI	GCAATG	1 cut(s)	1427
BsrFI	RCCGGY	2 cut(s)	452, 817
BsrI	ACTGG	5 cut(s)	260, 357, 482, 592, 677
BssAI	RCCGGY	2 cut(s)	452, 817
BssECI	CCNNGG	3 cut(s)	129, 822, 916
BssMI	GATC	6 cut(s)	553, 864, 1116, 1267, 1285, 1333
BssNAI	GTATAC	1 cut(s)	691
BssT1I	CCWWGG	1 cut(s)	822
Bst1107I	GTATAC	1 cut(s)	691
Bst2UI	CCWGG	2 cut(s)	130, 918
Bst4CI	ACNGT	3 cut(s)	340, 949, 1146
Bst6I	CTCTTC	3 cut(s)	194, 322, 563
BstBAI	YACGTR	1 cut(s)	1025
BstC8I	GCNNGC	3 cut(s)	454, 566, 788
BstDEI	CTNAG	5 cut(s)	244, 463, 953, 1097, 1125
BstF5I	GGATG	1 cut(s)	1239
BstFNI	CGCG	1 cut(s)	230
BstHHI	GCGC	1 cut(s)	232
BstKTI	GATC	6 cut(s)	556, 867, 1119, 1270, 1288, 1336
BstMAI	GTCTC	6 cut(s)	468, 770, 862, 936, 1128, 1369
BstMBI	GATC	6 cut(s)	553, 864, 1116, 1267, 1285, 1333
BstMWI	GCNNNNNNNGC	4 cut(s)	43, 227, 720, 1208
BstNI	CCWGG	2 cut(s)	130, 918
BstPAI	GACNNNNGTC	1 cut(s)	1111
BstSCI	CCNGG	2 cut(s)	128, 916
BstSFI	CTRYAG	1 cut(s)	1071
BstSLI	GKGCMC	1 cut(s)	128
BstUI	CGCG	1 cut(s)	230
BstV1I	GCAGC	9 cut(s)	181, 732, 795, 865, 910, 1024, 1039, 1198, 1411
BstX2I	RGATCY	2 cut(s)	864, 1333
BstYI	RGATCY	2 cut(s)	864, 1333
BstZ17I	GTATAC	1 cut(s)	691
Bsu15I	ATCGAT	2 cut(s)	552, 1288
BsuRI	GGCC	3 cut(s)	105, 175, 821
BsuTUI	ATCGAT	2 cut(s)	552, 1288
BtsCI	GGATG	1 cut(s)	1239
BtsIMutI	CAGTG	4 cut(s)	253, 336, 1039, 1133
BveI	ACCTGC	1 cut(s)	1009
Cac8I	GCNNGC	3 cut(s)	454, 566, 788
CaiI	CAGNNNCTG	1 cut(s)	428
CciI	TCATGA	1 cut(s)	796
CfoI	GCGC	1 cut(s)	232
Cfr10I	RCCGGY	2 cut(s)	452, 817
Cfr13I	GGNCC	4 cut(s)	174, 239, 538, 1131
ClaI	ATCGAT	2 cut(s)	552, 1288
Csp6I	GTAC	1 cut(s)	1066
CviAII	CATG	7 cut(s)	160, 386, 397, 682, 797, 882, 1351
CviQI	GTAC	1 cut(s)	1066
DdeI	CTNAG	5 cut(s)	244, 463, 953, 1097, 1125
DpnI	GATC	6 cut(s)	555, 866, 1118, 1269, 1287, 1335
DpnII	GATC	6 cut(s)	553, 864, 1116, 1267, 1285, 1333
DraI	TTTAAA	2 cut(s)	369, 1501
DraIII	CACNNNGTG	1 cut(s)	259
DrdI	GACNNNNNNGTC	1 cut(s)	1399
DseDI	GACNNNNNNGTC	1 cut(s)	1399
EaeI	YGGCCR	2 cut(s)	103, 819
Eam1104I	CTCTTC	3 cut(s)	194, 322, 563
EarI	CTCTTC	3 cut(s)	194, 322, 563
Eco130I	CCWWGG	1 cut(s)	822
Eco24I	GRGCYC	1 cut(s)	21
Eco31I	GGTCTC	2 cut(s)	862, 1128
Eco32I	GATATC	4 cut(s)	92, 492, 735, 1167
Eco47I	GGWCC	3 cut(s)	239, 538, 1131
Eco57I	CTGAAG	1 cut(s)	1304
Eco72I	CACGTG	1 cut(s)	1025
Eco88I	CYCGRG	1 cut(s)	30
EcoRII	CCWGG	2 cut(s)	128, 916
EcoRV	GATATC	4 cut(s)	92, 492, 735, 1167
EcoT14I	CCWWGG	1 cut(s)	822
EcoT38I	GRGCYC	1 cut(s)	21
ErhI	CCWWGG	1 cut(s)	822
Esp3I	CGTCTC	1 cut(s)	1369
FaeI	CATG	7 cut(s)	163, 389, 400, 685, 800, 885, 1354
FalI	AAGNNNNNCTT	2 cut(s)	853, 885
FaqI	GGGAC	2 cut(s)	595, 976
FatI	CATG	7 cut(s)	159, 385, 396, 681, 796, 881, 1350
FauNDI	CATATG	1 cut(s)	1006
FblI	GTMKAC	3 cut(s)	357, 690, 761
Fnu4HI	GCNGC	9 cut(s)	195, 721, 784, 879, 899, 1038, 1053, 1212, 1425
FokI	GGATG	1 cut(s)	1246
FriOI	GRGCYC	1 cut(s)	21
Fsp4HI	GCNGC	9 cut(s)	195, 721, 784, 879, 899, 1038, 1053, 1212, 1425
FspBI	CTAG	3 cut(s)	401, 710, 1218
GlaI	GCGC	1 cut(s)	231
GluI	GCNGC	9 cut(s)	195, 721, 784, 879, 899, 1038, 1053, 1212, 1425
GsuI	CTGGAG	1 cut(s)	351
HaeIII	GGCC	3 cut(s)	105, 175, 821
HapII	CCGG	5 cut(s)	289, 453, 704, 818, 1104
HhaI	GCGC	1 cut(s)	232
Hin1II	CATG	7 cut(s)	163, 389, 400, 685, 800, 885, 1354
Hin6I	GCGC	1 cut(s)	230
HinP1I	GCGC	1 cut(s)	230
HincII	GTYRAC	1 cut(s)	1392
HindII	GTYRAC	1 cut(s)	1392
HinfI	GANTC	5 cut(s)	179, 215, 700, 1029, 1280
HpaII	CCGG	5 cut(s)	289, 453, 704, 818, 1104
HphI	GGTGA	2 cut(s)	499, 1426
Hpy166II	GTNNAC	5 cut(s)	358, 691, 762, 1131, 1392
Hpy188I	TCNGA	8 cut(s)	89, 239, 364, 496, 1100, 1285, 1338, 1460
Hpy188III	TCNNGA	7 cut(s)	30, 117, 512, 747, 773, 797, 1277
Hpy8I	GTNNAC	5 cut(s)	358, 691, 762, 1131, 1392
Hpy99I	CGWCG	1 cut(s)	422
HpyAV	CCTTC	5 cut(s)	551, 753, 986, 1144, 1328
HpyCH4III	ACNGT	3 cut(s)	340, 949, 1146
HpyCH4IV	ACGT	2 cut(s)	417, 1024
HpyF10VI	GCNNNNNNNGC	4 cut(s)	43, 227, 720, 1208
HpyF3I	CTNAG	5 cut(s)	244, 463, 953, 1097, 1125
HpySE526I	ACGT	2 cut(s)	417, 1024
Hsp92II	CATG	7 cut(s)	163, 389, 400, 685, 800, 885, 1354
HspAI	GCGC	1 cut(s)	230
KroI	GCCGGC	1 cut(s)	452
KroNI	GCCGGC	1 cut(s)	454
Kzo9I	GATC	6 cut(s)	553, 864, 1116, 1267, 1285, 1333
LmnI	GCTCC	4 cut(s)	206, 425, 580, 918
Lsp1109I	GCAGC	9 cut(s)	181, 732, 795, 865, 910, 1024, 1039, 1198, 1411
LweI	GCATC	1 cut(s)	1464
MaeI	CTAG	3 cut(s)	401, 710, 1218
MaeII	ACGT	2 cut(s)	417, 1024
MaeIII	GTNAC	4 cut(s)	301, 436, 844, 1414
MalI	GATC	6 cut(s)	555, 866, 1118, 1269, 1287, 1335
MbiI	CCGCTC	1 cut(s)	209
MboI	GATC	6 cut(s)	553, 864, 1116, 1267, 1285, 1333
MboII	GAAGA	4 cut(s)	181, 309, 550, 742
MfeI	CAATTG	1 cut(s)	1041
MflI	RGATCY	2 cut(s)	864, 1333
MhlI	GDGCHC	4 cut(s)	21, 128, 577, 915
MlsI	TGGCCA	1 cut(s)	105
MluCI	AATT	7 cut(s)	140, 379, 1041, 1047, 1059, 1158, 1326
MluNI	TGGCCA	1 cut(s)	105
MlyI	GAGTC	1 cut(s)	173
MmeI	TCCRAC	4 cut(s)	229, 412, 645, 1279
MnlI	CCTC	9 cut(s)	57, 84, 87, 232, 326, 1148, 1295, 1457, 1478
Mox20I	TGGCCA	1 cut(s)	105
MroNI	GCCGGC	1 cut(s)	452
MscI	TGGCCA	1 cut(s)	105
MseI	TTAA	5 cut(s)	368, 410, 629, 837, 1500
MslI	CAYNNNNRTG	3 cut(s)	131, 341, 985
Msp20I	TGGCCA	1 cut(s)	105
MspI	CCGG	5 cut(s)	289, 453, 704, 818, 1104
MspR9I	CCNGG	2 cut(s)	130, 918
MunI	CAATTG	1 cut(s)	1041
MvaI	CCWGG	2 cut(s)	130, 918
MvnI	CGCG	1 cut(s)	230
MwoI	GCNNNNNNNGC	4 cut(s)	43, 227, 720, 1208
NaeI	GCCGGC	1 cut(s)	454
NdeI	CATATG	1 cut(s)	1006
NdeII	GATC	6 cut(s)	553, 864, 1116, 1267, 1285, 1333
NgoMIV	GCCGGC	1 cut(s)	452
NlaIII	CATG	7 cut(s)	163, 389, 400, 685, 800, 885, 1354
NlaIV	GGNNCC	5 cut(s)	127, 241, 457, 816, 866
NmuCI	GTSAC	1 cut(s)	1414
OliI	CACNNNNGTG	1 cut(s)	131
PagI	TCATGA	1 cut(s)	796
PdiI	GCCGGC	1 cut(s)	454
PfeI	GAWTC	4 cut(s)	215, 700, 1029, 1280
PflMI	CCANNNNNTGG	1 cut(s)	135
PkrI	GCNGC	9 cut(s)	196, 722, 785, 880, 900, 1039, 1054, 1213, 1426
PleI	GAGTC	1 cut(s)	173
PmaCI	CACGTG	1 cut(s)	1025
PmlI	CACGTG	1 cut(s)	1025
PpsI	GAGTC	1 cut(s)	173
Ppu21I	YACGTR	1 cut(s)	1025
PshAI	GACNNNNGTC	1 cut(s)	1111
Psp6I	CCWGG	2 cut(s)	128, 916
PspCI	CACGTG	1 cut(s)	1025
PspGI	CCWGG	2 cut(s)	128, 916
PspN4I	GGNNCC	5 cut(s)	127, 241, 457, 816, 866
PspPI	GGNCC	4 cut(s)	174, 239, 538, 1131
PstNI	CAGNNNCTG	1 cut(s)	428
PsuI	RGATCY	2 cut(s)	864, 1333
RsaI	GTAC	1 cut(s)	1067
RsaNI	GTAC	1 cut(s)	1066
RseI	CAYNNNNRTG	3 cut(s)	131, 341, 985
SaqAI	TTAA	5 cut(s)	368, 410, 629, 837, 1500
SatI	GCNGC	9 cut(s)	195, 721, 784, 879, 899, 1038, 1053, 1212, 1425
Sau3AI	GATC	6 cut(s)	553, 864, 1116, 1267, 1285, 1333
Sau96I	GGNCC	4 cut(s)	174, 239, 538, 1131
SchI	GAGTC	1 cut(s)	173
ScrFI	CCNGG	2 cut(s)	130, 918
SduI	GDGCHC	4 cut(s)	21, 128, 577, 915
SfaNI	GCATC	1 cut(s)	1464
SfcI	CTRYAG	1 cut(s)	1071
SinI	GGWCC	3 cut(s)	239, 538, 1131
SmiMI	CAYNNNNRTG	3 cut(s)	131, 341, 985
SmlI	CTYRAG	1 cut(s)	859
SmoI	CTYRAG	1 cut(s)	859
Sse9I	AATT	7 cut(s)	140, 379, 1041, 1047, 1059, 1158, 1326
SsiI	CCGC	5 cut(s)	209, 228, 373, 1247, 1453
SspI	AATATT	1 cut(s)	408
SspMI	CTAG	3 cut(s)	401, 710, 1218
StyD4I	CCNGG	2 cut(s)	128, 916
StyI	CCWWGG	1 cut(s)	822
TaaI	ACNGT	3 cut(s)	340, 949, 1146
TaiI	ACGT	2 cut(s)	420, 1027
TaqI	TCGA	4 cut(s)	552, 1115, 1270, 1288
TaqII	GACCGA	1 cut(s)	526
TasI	AATT	7 cut(s)	140, 379, 1041, 1047, 1059, 1158, 1326
TfiI	GAWTC	4 cut(s)	215, 700, 1029, 1280
Tru1I	TTAA	5 cut(s)	368, 410, 629, 837, 1500
Tru9I	TTAA	5 cut(s)	368, 410, 629, 837, 1500
TscAI	CASTG	4 cut(s)	260, 343, 1039, 1133
TseFI	GTSAC	1 cut(s)	1414
TseI	GCWGC	9 cut(s)	194, 720, 783, 878, 898, 1037, 1052, 1211, 1424
Tsp45I	GTSAC	1 cut(s)	1414
TspDTI	ATGAA	5 cut(s)	374, 382, 545, 583, 670
TspGWI	ACGGA	1 cut(s)	742
TspRI	CASTG	4 cut(s)	260, 343, 1039, 1133
Van91I	CCANNNNNTGG	1 cut(s)	135
VpaK11BI	GGWCC	3 cut(s)	239, 538, 1131
XapI	RAATTY	2 cut(s)	140, 379
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1380
XmiI	GTMKAC	3 cut(s)	357, 690, 761
XspI	CTAG	3 cut(s)	401, 710, 1218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.