RLG00000024933

Solute carrier family 40 member

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
40466476 .. 40469846
3371 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024933

Sequence Viewer

Length: 1545 bp
ATGGAGGAGGAAGAGTGCCTTCTAGCCCATGTACAAGAATACCCTTCTGATCATTCTCAATATGATCCTTTTCCTTCAATTCTTGTCAAATATCTTTACATAGGCCACTTTTTGGCCAGATGGGGTGCCAGAATGTGGGAATTCTCTGTTGGTTTATACATGATAAATGTATGGCCAGACTCTCTACTCTTTGCTGCTATATATGGTGTGGTGGAATCAGCCTCTACTGCGCTTTTTGGACCTTTGGTCGGACGGTGGGTGGATAGATTCTCATATGTAAAGATTCTTCTAGTTTGGTTAGTAACACAAAATCTCTCTTTTATGATTGCTGGAGCCACCGTGATGGCGTTACTGATCTACCCAGATCTAAAGCTCACAAGTTTCTATGCATTTGTTTTACTTATCATATTAACCAACATCTCTGGAGCTCTTGGAGTTCTCTCCACTCTTGCTGGTACCATCTTAGTTGAAAGAGACTGGGTTGTGGTGATATCAGAAGGGCATTCTCCAGAAGTACTAACAAACATGAATTCGGTCATTAGGCGTATTGATCTTTTCTCCAAACTTTGTGCTCCGGTGGTAACCGGCTTCATCATCAGCTTTGTATCACTAAAAGCTTCTGCTTTAACTTTAGTACTCTGGAATACCATATCTGTTTGGCTAGAATACTGGCTATTCATTTCTGTGTATAATGGGATTCCAGCTTTAGGCGAAAGCAGCCAAAGGAAGATATCAAGACCTTCTCAAAGTGATGTTGAAGGCACTGGCACATCAACTTCTCAAGAGAGAAGTAGCTTGCTTTCTAAAGATGAAAATGATTCAGAATTCTCTGAGGAAAGCTGGATAACGGGAGTTATTAAAAAGGTGTCAAGGATCCCTTATGTTAGAGCTTGGAGCGTGTATTTGCAGCAAGATGTTGTGCTTCCTGGAGTATCTCTGGCTTTGTTATATTTCACTGTACTCAGCTTTGGGACATTGATGACAGCTACCTTGGAATGGGAAGGCATACCTGCATACACCATTGGGATAGCTCGTGGAATAAGCGCTGCAATTGGAATTTCTGCAACAGTTGTTTATCCCATCTTGCAATCTCATATCTTAACACTTAGAACCGGACTCTGGTCTATCTGGTCTCAGTGGACCTTCCTCATATTATGTGTTGCTTCAATATGGATCCATAACAGCCTTTGGTCAGCTTATATGCTAATGGCAGGAGTGGCTACTTCTCGGCTTGGGTTGTGGATGTTTGATCTGGCTGTCATCCAACAAATGCAGGATCAAGTTCCTGAATCAGATCGTTGTGTAGTGGGAGGTGTTCAGAACTCCCTTCAGTCCAGCATGGATTTGATGGGCTATGTCATGGGAATAATCATATCTAATCCACAGGAATTCTGGAAGTTGATTTTGGTCTCGTTTGCCTGGGCAACATTGGCAGCATTACTCTATACCCTGCACGTTTACCGCGTACGAAAGCACCTCCTCCACTTTGAGAAATTAACCTTCTTTCTGAACTGCTTCACCAGTTCACAATCTGAAAATTCATAA

Protein Analysis

515

Amino Acids

57.65

Weight (kDa)

5.52

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPN1 PF06963 30 - 473 6.3e-161 Ferroportin1 (FPN1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1018
Acc65I GGTACC 1 cut(s) 455
AccB1I GGYRCC 2 cut(s) 125, 455
AccB7I CCANNNNNTGG 2 cut(s) 112, 135
AccII CGCG 1 cut(s) 1464
AciI CCGC 1 cut(s) 1462
AclWI GGATC 6 cut(s) 59, 868, 881, 1168, 1181, 1284
AcoI YGGCCR 2 cut(s) 114, 173
AcsI RAATTY 6 cut(s) 140, 529, 824, 1056, 1388, 1537
AcuI CTGAAG 1 cut(s) 1313
AfaI GTAC 6 cut(s) 33, 457, 516, 636, 960, 1467
AfeI AGCGCT 1 cut(s) 1045
AfiI CCNNNNNNNGG 6 cut(s) 112, 135, 248, 707, 996, 1119
AgsI TTSAA 4 cut(s) 78, 470, 758, 1167
AhdI GACNNNNNGTC 1 cut(s) 245
AjnI CCWGG 2 cut(s) 925, 1418
AjuI GAANNNNNNNTTGG 4 cut(s) 132, 164, 1388, 1420
Alw21I GWGCWC 2 cut(s) 430, 574
Alw26I GTCTC 3 cut(s) 468, 1137, 1414
AlwI GGATC 6 cut(s) 59, 868, 881, 1168, 1181, 1284
Aor51HI AGCGCT 1 cut(s) 1045
AoxI GGCC 3 cut(s) 103, 114, 173
ApeKI GCWGC 5 cut(s) 194, 717, 907, 1046, 1433
ApoI RAATTY 6 cut(s) 140, 529, 824, 1056, 1388, 1537
Asp700I GAANNNNTTC 1 cut(s) 1514
Asp718I GGTACC 1 cut(s) 455
AspLEI GCGC 2 cut(s) 232, 1046
AspS9I GGNCC 2 cut(s) 239, 1140
AsuHPI GGTGA 2 cut(s) 499, 1510
AvaII GGWCC 2 cut(s) 239, 1140
BalI TGGCCA 2 cut(s) 116, 175
BamHI GGATCC 2 cut(s) 873, 1173
BanI GGYRCC 2 cut(s) 125, 455
BanII GRGCYC 1 cut(s) 430
BarI GAAGNNNNNNTAC 2 cut(s) 270, 302
BauI CACGAG 1 cut(s) 1032
Bbv12I GWGCWC 2 cut(s) 430, 574
BbvI GCAGC 5 cut(s) 181, 729, 919, 1033, 1445
BccI CCATC 5 cut(s) 114, 337, 467, 1088, 1342
BciT130I CCWGG 2 cut(s) 927, 1420
BclI TGATCA 1 cut(s) 49
BcoDI GTCTC 3 cut(s) 468, 1137, 1414
BfaI CTAG 3 cut(s) 23, 290, 662
BfoI RGCGCY 1 cut(s) 1047
BfuAI ACCTGC 1 cut(s) 1018
BglII AGATCT 1 cut(s) 364
BisI GCNGC 5 cut(s) 195, 718, 908, 1047, 1434
BlsI GCNGC 5 cut(s) 196, 719, 909, 1048, 1435
BmcAI AGTACT 2 cut(s) 516, 636
Bme1390I CCNGG 2 cut(s) 927, 1420
Bme18I GGWCC 2 cut(s) 239, 1140
BmeRI GACNNNNNGTC 1 cut(s) 245
BmgT120I GGNCC 2 cut(s) 239, 1140
BmiI GGNNCC 5 cut(s) 127, 334, 457, 875, 1175
BmrFI CCNGG 2 cut(s) 927, 1420
BmrI ACTGGG 1 cut(s) 487
BmuI ACTGGG 1 cut(s) 487
BoxI GACNNNNGTC 1 cut(s) 1120
BpmI CTGGAG 4 cut(s) 351, 444, 492, 948
BpuEI CTTGAG 1 cut(s) 765
BsaI GGTCTC 2 cut(s) 1137, 1414
BsaJI CCNNGG 2 cut(s) 990, 1419
BsaWI WCCGGW 2 cut(s) 574, 1112
BsaXI ACNNNNNCTCC 3 cut(s) 29, 324, 354
Bsc4I CCNNNNNNNGG 6 cut(s) 112, 135, 248, 707, 996, 1119
Bse118I RCCGGY 1 cut(s) 584
Bse1I ACTGG 4 cut(s) 482, 674, 769, 1521
BseBI CCWGG 2 cut(s) 927, 1420
BseDI CCNNGG 2 cut(s) 990, 1419
BseGI GGATG 2 cut(s) 1248, 1260
BseLI CCNNNNNNNGG 6 cut(s) 112, 135, 248, 707, 996, 1119
BseMII CTCAG 3 cut(s) 822, 976, 1148
BseNI ACTGG 4 cut(s) 482, 674, 769, 1521
BseRI GAGGAG 2 cut(s) 20, 1469
BseXI GCAGC 5 cut(s) 181, 729, 919, 1033, 1445
BsgI GTGCAG 1 cut(s) 1436
Bsh1236I CGCG 1 cut(s) 1464
BshFI GGCC 3 cut(s) 105, 116, 175
BshNI GGYRCC 2 cut(s) 125, 455
BsiHKAI GWGCWC 2 cut(s) 430, 574
BsiSI CCGG 3 cut(s) 575, 585, 1113
BsiWI CGTACG 1 cut(s) 1465
BslFI GGGAC 1 cut(s) 985
BslI CCNNNNNNNGG 6 cut(s) 112, 135, 248, 707, 996, 1119
BsmAI GTCTC 3 cut(s) 468, 1137, 1414
BsmFI GGGAC 1 cut(s) 985
BsmI GAATGC 1 cut(s) 502
BsnI GGCC 3 cut(s) 105, 116, 175
Bso31I GGTCTC 2 cut(s) 1137, 1414
Bsp1286I GDGCHC 2 cut(s) 430, 574
Bsp1407I TGTACA 1 cut(s) 31
BspACI CCGC 1 cut(s) 1462
BspANI GGCC 3 cut(s) 105, 116, 175
BspCNI CTCAG 3 cut(s) 823, 975, 1147
BspFNI CGCG 1 cut(s) 1464
BspLI GGNNCC 5 cut(s) 127, 334, 457, 875, 1175
BspMI ACCTGC 1 cut(s) 1018
BspPI GGATC 6 cut(s) 59, 868, 881, 1168, 1181, 1284
BspT107I GGYRCC 2 cut(s) 125, 455
BspTNI GGTCTC 2 cut(s) 1137, 1414
BsrFI RCCGGY 1 cut(s) 584
BsrGI TGTACA 1 cut(s) 31
BsrI ACTGG 4 cut(s) 482, 674, 769, 1521
BssAI RCCGGY 1 cut(s) 584
BssECI CCNNGG 2 cut(s) 990, 1419
BssSI CACGAG 1 cut(s) 1032
BssT1I CCWWGG 1 cut(s) 990
Bst2BI CACGAG 1 cut(s) 1032
Bst2UI CCWGG 2 cut(s) 927, 1420
Bst4CI ACNGT 4 cut(s) 255, 340, 958, 1069
Bst6I CTCTTC 1 cut(s) 6
BstAUI TGTACA 1 cut(s) 31
BstC8I GCNNGC 1 cut(s) 797
BstDEI CTNAG 5 cut(s) 463, 831, 962, 1106, 1134
BstEII GGTNACC 1 cut(s) 580
BstF5I GGATG 2 cut(s) 1248, 1260
BstFNI CGCG 1 cut(s) 1464
BstH2I RGCGCY 1 cut(s) 1047
BstHHI GCGC 2 cut(s) 232, 1046
BstMAI GTCTC 3 cut(s) 468, 1137, 1414
BstMWI GCNNNNNNNGC 4 cut(s) 227, 717, 1217, 1430
BstNI CCWGG 2 cut(s) 927, 1420
BstPAI GACNNNNGTC 1 cut(s) 1120
BstPI GGTNACC 1 cut(s) 580
BstSCI CCNGG 2 cut(s) 925, 1418
BstUI CGCG 1 cut(s) 1464
BstV1I GCAGC 5 cut(s) 181, 729, 919, 1033, 1445
BstX2I RGATCY 3 cut(s) 364, 873, 1173
BstXI CCANNNNNNTGG 1 cut(s) 343
BstYI RGATCY 3 cut(s) 364, 873, 1173
BsuRI GGCC 3 cut(s) 105, 116, 175
BtsCI GGATG 2 cut(s) 1248, 1260
BtsIMutI CAGTG 3 cut(s) 762, 954, 1142
BveI ACCTGC 1 cut(s) 1018
Cac8I GCNNGC 1 cut(s) 797
CfoI GCGC 2 cut(s) 232, 1046
Cfr10I RCCGGY 1 cut(s) 584
Cfr13I GGNCC 2 cut(s) 239, 1140
Csp6I GTAC 6 cut(s) 32, 456, 515, 635, 959, 1466
CviAII CATG 5 cut(s) 29, 160, 526, 1339, 1360
CviQI GTAC 6 cut(s) 32, 456, 515, 635, 959, 1466
DdeI CTNAG 5 cut(s) 463, 831, 962, 1106, 1134
DriI GACNNNNNGTC 1 cut(s) 245
EaeI YGGCCR 2 cut(s) 114, 173
Eam1104I CTCTTC 1 cut(s) 6
Eam1105I GACNNNNNGTC 1 cut(s) 245
EarI CTCTTC 1 cut(s) 6
Ecl136II GAGCTC 1 cut(s) 428
Eco130I CCWWGG 1 cut(s) 990
Eco24I GRGCYC 1 cut(s) 430
Eco31I GGTCTC 2 cut(s) 1137, 1414
Eco32I GATATC 2 cut(s) 492, 732
Eco47I GGWCC 2 cut(s) 239, 1140
Eco47III AGCGCT 1 cut(s) 1045
Eco53kI GAGCTC 1 cut(s) 428
Eco57I CTGAAG 1 cut(s) 1313
Eco91I GGTNACC 1 cut(s) 580
EcoICRI GAGCTC 1 cut(s) 428
EcoO65I GGTNACC 1 cut(s) 580
EcoRI GAATTC 4 cut(s) 140, 529, 824, 1388
EcoRII CCWGG 2 cut(s) 925, 1418
EcoRV GATATC 2 cut(s) 492, 732
EcoT14I CCWWGG 1 cut(s) 990
EcoT22I ATGCAT 1 cut(s) 391
EcoT38I GRGCYC 1 cut(s) 430
ErhI CCWWGG 1 cut(s) 990
FaeI CATG 5 cut(s) 32, 163, 529, 1342, 1363
FalI AAGNNNNNCTT 3 cut(s) 35, 862, 894
FaqI GGGAC 1 cut(s) 985
FatI CATG 5 cut(s) 28, 159, 525, 1338, 1359
FauNDI CATATG 1 cut(s) 274
FbaI TGATCA 1 cut(s) 49
Fnu4HI GCNGC 5 cut(s) 195, 718, 908, 1047, 1434
FokI GGATG 2 cut(s) 1247, 1255
FriOI GRGCYC 1 cut(s) 430
Fsp4HI GCNGC 5 cut(s) 195, 718, 908, 1047, 1434
FspBI CTAG 3 cut(s) 23, 290, 662
GlaI GCGC 2 cut(s) 231, 1045
GluI GCNGC 5 cut(s) 195, 718, 908, 1047, 1434
GsuI CTGGAG 4 cut(s) 351, 444, 492, 948
HaeII RGCGCY 1 cut(s) 1047
HaeIII GGCC 3 cut(s) 105, 116, 175
HapII CCGG 3 cut(s) 575, 585, 1113
HhaI GCGC 2 cut(s) 232, 1046
Hin1II CATG 5 cut(s) 32, 163, 529, 1342, 1363
Hin6I GCGC 2 cut(s) 230, 1044
HinP1I GCGC 2 cut(s) 230, 1044
HindIII AAGCTT 1 cut(s) 615
HinfI GANTC 8 cut(s) 179, 215, 267, 283, 697, 818, 1116, 1289
HpaII CCGG 3 cut(s) 575, 585, 1113
HphI GGTGA 2 cut(s) 499, 1510
Hpy166II GTNNAC 3 cut(s) 1140, 1459, 1526
Hpy188I TCNGA 9 cut(s) 49, 251, 496, 823, 832, 1294, 1320, 1509, 1534
Hpy188III TCNNGA 7 cut(s) 423, 509, 640, 735, 782, 1286, 1393
Hpy8I GTNNAC 3 cut(s) 1140, 1459, 1526
HpyCH4III ACNGT 4 cut(s) 255, 340, 958, 1069
HpyCH4IV ACGT 1 cut(s) 1455
HpyCH4V TGCA 8 cut(s) 389, 907, 1013, 1049, 1064, 1087, 1273, 1453
HpyF10VI GCNNNNNNNGC 4 cut(s) 227, 717, 1217, 1430
HpyF3I CTNAG 5 cut(s) 463, 831, 962, 1106, 1134
HpySE526I ACGT 1 cut(s) 1455
Hsp92II CATG 5 cut(s) 32, 163, 529, 1342, 1363
HspAI GCGC 2 cut(s) 230, 1044
KpnI GGTACC 1 cut(s) 459
Ksp22I TGATCA 1 cut(s) 49
LmnI GCTCC 4 cut(s) 332, 425, 577, 894
Lsp1109I GCAGC 5 cut(s) 181, 729, 919, 1033, 1445
MaeI CTAG 3 cut(s) 23, 290, 662
MaeII ACGT 1 cut(s) 1455
MaeIII GTNAC 3 cut(s) 301, 348, 580
MboII GAAGA 3 cut(s) 23, 278, 739
MfeI CAATTG 1 cut(s) 1050
MflI RGATCY 3 cut(s) 364, 873, 1173
MhlI GDGCHC 2 cut(s) 430, 574
MlsI TGGCCA 2 cut(s) 116, 175
MluCI AATT 9 cut(s) 78, 140, 529, 824, 1050, 1056, 1388, 1493, 1537
MluNI TGGCCA 2 cut(s) 116, 175
MlyI GAGTC 2 cut(s) 173, 1110
MmeI TCCRAC 2 cut(s) 229, 1288
MnlI CCTC 6 cut(s) 232, 826, 1157, 1304, 1487, 1490
Mox20I TGGCCA 2 cut(s) 116, 175
Mph1103I ATGCAT 1 cut(s) 391
MroXI GAANNNNTTC 1 cut(s) 1514
MscI TGGCCA 2 cut(s) 116, 175
MseI TTAA 5 cut(s) 410, 626, 858, 1100, 1496
MslI CAYNNNNRTG 2 cut(s) 341, 683
Msp20I TGGCCA 2 cut(s) 116, 175
MspI CCGG 3 cut(s) 575, 585, 1113
MspR9I CCNGG 2 cut(s) 927, 1420
MunI CAATTG 1 cut(s) 1050
Mva1269I GAATGC 1 cut(s) 502
MvaI CCWGG 2 cut(s) 927, 1420
MvnI CGCG 1 cut(s) 1464
MwoI GCNNNNNNNGC 4 cut(s) 227, 717, 1217, 1430
NdeI CATATG 1 cut(s) 274
NlaIII CATG 5 cut(s) 32, 163, 529, 1342, 1363
NlaIV GGNNCC 5 cut(s) 127, 334, 457, 875, 1175
NmeAIII GCCGAG 1 cut(s) 1207
NsiI ATGCAT 1 cut(s) 391
PcsI WCGNNNNNNNCGW 1 cut(s) 1461
PctI GAATGC 1 cut(s) 502
PdmI GAANNNNTTC 1 cut(s) 1514
PfeI GAWTC 6 cut(s) 215, 267, 283, 697, 818, 1289
Pfl23II CGTACG 1 cut(s) 1465
PflMI CCANNNNNTGG 2 cut(s) 112, 135
PfoI TCCNGGA 1 cut(s) 925
PkrI GCNGC 5 cut(s) 196, 719, 909, 1048, 1435
PleI GAGTC 2 cut(s) 173, 1110
PpsI GAGTC 2 cut(s) 173, 1110
PshAI GACNNNNGTC 1 cut(s) 1120
Psp124BI GAGCTC 1 cut(s) 430
Psp6I CCWGG 2 cut(s) 925, 1418
PspEI GGTNACC 1 cut(s) 580
PspGI CCWGG 2 cut(s) 925, 1418
PspLI CGTACG 1 cut(s) 1465
PspN4I GGNNCC 5 cut(s) 127, 334, 457, 875, 1175
PspPI GGNCC 2 cut(s) 239, 1140
PsuI RGATCY 3 cut(s) 364, 873, 1173
RsaI GTAC 6 cut(s) 33, 457, 516, 636, 960, 1467
RsaNI GTAC 6 cut(s) 32, 456, 515, 635, 959, 1466
RseI CAYNNNNRTG 2 cut(s) 341, 683
SacI GAGCTC 1 cut(s) 430
SaqAI TTAA 5 cut(s) 410, 626, 858, 1100, 1496
SatI GCNGC 5 cut(s) 195, 718, 908, 1047, 1434
Sau96I GGNCC 2 cut(s) 239, 1140
ScaI AGTACT 2 cut(s) 516, 636
SchI GAGTC 2 cut(s) 173, 1110
ScrFI CCNGG 2 cut(s) 927, 1420
SduI GDGCHC 2 cut(s) 430, 574
SinI GGWCC 2 cut(s) 239, 1140
SmiMI CAYNNNNRTG 2 cut(s) 341, 683
SmlI CTYRAG 1 cut(s) 780
SmoI CTYRAG 1 cut(s) 780
Sse9I AATT 9 cut(s) 78, 140, 529, 824, 1050, 1056, 1388, 1493, 1537
SsiI CCGC 1 cut(s) 1462
SspMI CTAG 3 cut(s) 23, 290, 662
SstI GAGCTC 1 cut(s) 430
StyD4I CCNGG 2 cut(s) 925, 1418
StyI CCWWGG 1 cut(s) 990
TaaI ACNGT 4 cut(s) 255, 340, 958, 1069
TaiI ACGT 1 cut(s) 1458
TaqII GACCGA 1 cut(s) 523
TasI AATT 9 cut(s) 78, 140, 529, 824, 1050, 1056, 1388, 1493, 1537
TatI WGTACW 4 cut(s) 31, 514, 634, 958
TfiI GAWTC 6 cut(s) 215, 267, 283, 697, 818, 1289
Tru1I TTAA 5 cut(s) 410, 626, 858, 1100, 1496
Tru9I TTAA 5 cut(s) 410, 626, 858, 1100, 1496
TscAI CASTG 3 cut(s) 769, 961, 1142
TseI GCWGC 5 cut(s) 194, 717, 907, 1046, 1433
TspDTI ATGAA 5 cut(s) 542, 580, 667, 825, 1530
TspRI CASTG 3 cut(s) 769, 961, 1142
Van91I CCANNNNNTGG 2 cut(s) 112, 135
VpaK11BI GGWCC 2 cut(s) 239, 1140
XapI RAATTY 6 cut(s) 140, 529, 824, 1056, 1388, 1537
XcmI CCANNNNNNNNNTGG 1 cut(s) 1389
XmnI GAANNNNTTC 1 cut(s) 1514
XspI CTAG 3 cut(s) 23, 290, 662
ZrmI AGTACT 2 cut(s) 516, 636
Zsp2I ATGCAT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.