Rmu_sc0002677.1_g000013

Solute carrier family 40 member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002677.1
Physical Location & Seq
Reverse (-)
74107 .. 76232
2126 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002677.1_g000013.1.cds

Sequence Viewer

Length: 1224 bp
atgattgctggagccactgtgatggcgttactgatctacccagatctaaagctcacaaatttcaatgcatttgttttacttatcatattaaccaacatctctggagctcttggagctctctccactcttgctggtaccatcttagttgaaagagactgggttgtggtgatatcagaagggcattctccagaagtactaacaaacatgaattcggtccttaggcgtattgatcttttctccaagctatgtgcacctgtggtaaccggcttcatcatcagctttgtatcactaaaagcttctgctttaagtttagcactctggaatactatatctgtttggctggaatactggctattcatttctgtgtataatgggattccggctttaggcgaaagcagccaaaggaagatatcaagaccttctcagagtgatcttgaaggctcaggcacatcttcttctcaagagaggagcagcttgctttttaaagatgaaaatgatccagaattctcagaggaaagctggattactggggttattaaaacggtatcaaggatcccttatgttagtgcttggagtgtgtatttgcagcaagatgttgtactccctggagtatctctggctttgttatatttcactgtactcagctttggaacattgatgacagctaccttggaatgggaaggcatacctgcatacaccattgggatagctcgtggaataagcgctgcaattggaatttctgcaacagttgtttatcccatcttgcaagcgcatttcttaacacttagaaccggactctggtctatctggtgtcagtggaccttcctcatattatgtgttgcttcaatatggatccataacagcctttggtcagcttatatgctaatggcaggagtggctacttctcggcttgggttgtggatgtttgatttggctgtcatccaacaaatgcaggatcaagttcctgaatcagatcgttgtgtagtgggaggtgttcaaaactcccttcagtccagcatggatttgatgggctatgtcatgggaataatcatatctaatccacaggaattctggaagttgactttggtttcgtttgccgtggcaacattggctgcattgctctataccctgcacctctaccgcgtccgaaagcacctccttcacttggagaaattaaccgcctttctgaaatgcttccccagttcacaatctgaaaattcataa

Protein Analysis

407

Amino Acids

44.94

Weight (kDa)

5.71

Isoelectric Point (pI)

36.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 697
Acc65I GGTACC 1 cut(s) 134
AccB1I GGYRCC 1 cut(s) 134
AccII CGCG 1 cut(s) 1143
AciI CCGC 2 cut(s) 1141, 1179
AclWI GGATC 6 cut(s) 491, 547, 560, 847, 860, 963
AcsI RAATTY 6 cut(s) 58, 208, 503, 735, 1067, 1216
AcuI CTGAAG 1 cut(s) 992
AfaI GTAC 4 cut(s) 136, 195, 600, 639
AfeI AGCGCT 1 cut(s) 724
AfiI CCNNNNNNNGG 4 cut(s) 386, 675, 798, 1165
AgsI TTSAA 5 cut(s) 64, 149, 437, 846, 998
AjnI CCWGG 1 cut(s) 604
AjuI GAANNNNNNNTTGG 2 cut(s) 1067, 1099
Alw21I GWGCWC 3 cut(s) 109, 118, 253
Alw26I GTCTC 1 cut(s) 147
Alw44I GTGCAC 1 cut(s) 249
AlwI GGATC 6 cut(s) 491, 547, 560, 847, 860, 963
Aor51HI AGCGCT 1 cut(s) 724
ApaLI GTGCAC 1 cut(s) 249
ApeKI GCWGC 5 cut(s) 396, 471, 586, 725, 1112
ApoI RAATTY 6 cut(s) 58, 208, 503, 735, 1067, 1216
ArsI GACNNNNNNTTYG 2 cut(s) 1072, 1104
Asp700I GAANNNNTTC 1 cut(s) 1193
Asp718I GGTACC 1 cut(s) 134
AspLEI GCGC 2 cut(s) 725, 772
AspS9I GGNCC 2 cut(s) 214, 819
AsuHPI GGTGA 1 cut(s) 178
AvaII GGWCC 2 cut(s) 214, 819
AxyI CCTNAGG 1 cut(s) 218
BaeGI GKGCMC 1 cut(s) 253
BamHI GGATCC 2 cut(s) 552, 852
BanI GGYRCC 1 cut(s) 134
BanII GRGCYC 2 cut(s) 109, 118
BauI CACGAG 1 cut(s) 711
Bbv12I GWGCWC 3 cut(s) 109, 118, 253
BbvI GCAGC 5 cut(s) 408, 483, 598, 712, 1099
BccI CCATC 4 cut(s) 16, 146, 767, 1021
BceAI ACGGC 1 cut(s) 1082
BciT130I CCWGG 1 cut(s) 606
BcoDI GTCTC 1 cut(s) 147
BfoI RGCGCY 1 cut(s) 726
BfuAI ACCTGC 1 cut(s) 697
BglII AGATCT 1 cut(s) 43
BisI GCNGC 5 cut(s) 397, 472, 587, 726, 1113
BlsI GCNGC 5 cut(s) 398, 473, 588, 727, 1114
BmcAI AGTACT 1 cut(s) 195
Bme1390I CCNGG 1 cut(s) 606
Bme18I GGWCC 2 cut(s) 214, 819
BmgT120I GGNCC 2 cut(s) 214, 819
BmiI GGNNCC 4 cut(s) 13, 136, 554, 854
BmrFI CCNGG 1 cut(s) 606
BmrI ACTGGG 3 cut(s) 166, 537, 1194
BmuI ACTGGG 3 cut(s) 166, 537, 1194
BoxI GACNNNNGTC 1 cut(s) 799
BpmI CTGGAG 4 cut(s) 30, 123, 171, 627
Bpu10I CCTNAGC 1 cut(s) 442
BpuEI CTTGAG 1 cut(s) 444
BsaJI CCNNGG 3 cut(s) 604, 669, 1098
BsaWI WCCGGW 1 cut(s) 791
BsaXI ACNNNNNCTCC 1 cut(s) 33
Bsc4I CCNNNNNNNGG 4 cut(s) 386, 675, 798, 1165
Bse118I RCCGGY 1 cut(s) 263
Bse1I ACTGG 4 cut(s) 161, 353, 532, 1200
Bse21I CCTNAGG 1 cut(s) 218
Bse3DI GCAATG 1 cut(s) 1115
BseBI CCWGG 1 cut(s) 606
BseDI CCNNGG 3 cut(s) 604, 669, 1098
BseGI GGATG 2 cut(s) 927, 939
BseLI CCNNNNNNNGG 4 cut(s) 386, 675, 798, 1165
BseMI GCAATG 1 cut(s) 1115
BseMII CTCAG 4 cut(s) 437, 456, 522, 655
BseNI ACTGG 4 cut(s) 161, 353, 532, 1200
BseRI GAGGAG 1 cut(s) 481
BseSI GKGCMC 1 cut(s) 253
BseXI GCAGC 5 cut(s) 408, 483, 598, 712, 1099
BsgI GTGCAG 1 cut(s) 1115
Bsh1236I CGCG 1 cut(s) 1143
BshNI GGYRCC 1 cut(s) 134
BsiHKAI GWGCWC 3 cut(s) 109, 118, 253
BsiSI CCGG 3 cut(s) 264, 380, 792
BslI CCNNNNNNNGG 4 cut(s) 386, 675, 798, 1165
BsmAI GTCTC 1 cut(s) 147
BsmI GAATGC 1 cut(s) 181
Bsp1286I GDGCHC 3 cut(s) 109, 118, 253
Bsp143I GATC 9 cut(s) 33, 43, 229, 430, 496, 552, 852, 955, 973
BspACI CCGC 2 cut(s) 1141, 1179
BspCNI CTCAG 4 cut(s) 436, 455, 521, 654
BspFNI CGCG 1 cut(s) 1143
BspLI GGNNCC 4 cut(s) 13, 136, 554, 854
BspMI ACCTGC 1 cut(s) 697
BspPI GGATC 6 cut(s) 491, 547, 560, 847, 860, 963
BspT107I GGYRCC 1 cut(s) 134
BsrDI GCAATG 1 cut(s) 1115
BsrFI RCCGGY 1 cut(s) 263
BsrI ACTGG 4 cut(s) 161, 353, 532, 1200
BssAI RCCGGY 1 cut(s) 263
BssECI CCNNGG 3 cut(s) 604, 669, 1098
BssMI GATC 9 cut(s) 33, 43, 229, 430, 496, 552, 852, 955, 973
BssSI CACGAG 1 cut(s) 711
BssT1I CCWWGG 1 cut(s) 669
Bst2BI CACGAG 1 cut(s) 711
Bst2UI CCWGG 1 cut(s) 606
Bst4CI ACNGT 4 cut(s) 19, 544, 637, 748
BstC8I GCNNGC 2 cut(s) 476, 768
BstDEI CTNAG 7 cut(s) 142, 218, 423, 442, 508, 641, 785
BstDSI CCRYGG 1 cut(s) 1098
BstEII GGTNACC 1 cut(s) 259
BstF5I GGATG 2 cut(s) 927, 939
BstFNI CGCG 1 cut(s) 1143
BstH2I RGCGCY 1 cut(s) 726
BstHHI GCGC 2 cut(s) 725, 772
BstKTI GATC 9 cut(s) 36, 46, 232, 433, 499, 555, 855, 958, 976
BstMAI GTCTC 1 cut(s) 147
BstMBI GATC 9 cut(s) 33, 43, 229, 430, 496, 552, 852, 955, 973
BstMWI GCNNNNNNNGC 4 cut(s) 113, 396, 896, 1109
BstNI CCWGG 1 cut(s) 606
BstPAI GACNNNNGTC 1 cut(s) 799
BstPI GGTNACC 1 cut(s) 259
BstSCI CCNGG 1 cut(s) 604
BstSLI GKGCMC 1 cut(s) 253
BstUI CGCG 1 cut(s) 1143
BstV1I GCAGC 5 cut(s) 408, 483, 598, 712, 1099
BstX2I RGATCY 3 cut(s) 43, 552, 852
BstXI CCANNNNNNTGG 1 cut(s) 22
BstYI RGATCY 3 cut(s) 43, 552, 852
Bsu36I CCTNAGG 1 cut(s) 218
BtgI CCRYGG 1 cut(s) 1098
BtsCI GGATG 2 cut(s) 927, 939
BtsIMutI CAGTG 3 cut(s) 15, 633, 821
BveI ACCTGC 1 cut(s) 697
Cac8I GCNNGC 2 cut(s) 476, 768
CfoI GCGC 2 cut(s) 725, 772
Cfr10I RCCGGY 1 cut(s) 263
Cfr13I GGNCC 2 cut(s) 214, 819
CseI GACGC 1 cut(s) 1132
Csp6I GTAC 4 cut(s) 135, 194, 599, 638
CviAII CATG 3 cut(s) 205, 1018, 1039
CviQI GTAC 4 cut(s) 135, 194, 599, 638
DdeI CTNAG 7 cut(s) 142, 218, 423, 442, 508, 641, 785
DpnI GATC 9 cut(s) 35, 45, 231, 432, 498, 554, 854, 957, 975
DpnII GATC 9 cut(s) 33, 43, 229, 430, 496, 552, 852, 955, 973
DraI TTTAAA 1 cut(s) 484
Ecl136II GAGCTC 2 cut(s) 107, 116
Eco130I CCWWGG 1 cut(s) 669
Eco24I GRGCYC 2 cut(s) 109, 118
Eco32I GATATC 2 cut(s) 171, 411
Eco47I GGWCC 2 cut(s) 214, 819
Eco47III AGCGCT 1 cut(s) 724
Eco53kI GAGCTC 2 cut(s) 107, 116
Eco57I CTGAAG 1 cut(s) 992
Eco81I CCTNAGG 1 cut(s) 218
Eco91I GGTNACC 1 cut(s) 259
EcoICRI GAGCTC 2 cut(s) 107, 116
EcoO65I GGTNACC 1 cut(s) 259
EcoRI GAATTC 3 cut(s) 208, 503, 1067
EcoRII CCWGG 1 cut(s) 604
EcoRV GATATC 2 cut(s) 171, 411
EcoT14I CCWWGG 1 cut(s) 669
EcoT22I ATGCAT 1 cut(s) 70
EcoT38I GRGCYC 2 cut(s) 109, 118
ErhI CCWWGG 1 cut(s) 669
FaeI CATG 3 cut(s) 208, 1021, 1042
FalI AAGNNNNNCTT 2 cut(s) 541, 573
FatI CATG 3 cut(s) 204, 1017, 1038
Fnu4HI GCNGC 5 cut(s) 397, 472, 587, 726, 1113
FokI GGATG 2 cut(s) 926, 934
FriOI GRGCYC 2 cut(s) 109, 118
Fsp4HI GCNGC 5 cut(s) 397, 472, 587, 726, 1113
GlaI GCGC 2 cut(s) 724, 771
GluI GCNGC 5 cut(s) 397, 472, 587, 726, 1113
GsuI CTGGAG 4 cut(s) 30, 123, 171, 627
HaeII RGCGCY 1 cut(s) 726
HapII CCGG 3 cut(s) 264, 380, 792
HgaI GACGC 1 cut(s) 1132
HhaI GCGC 2 cut(s) 725, 772
Hin1II CATG 3 cut(s) 208, 1021, 1042
Hin6I GCGC 2 cut(s) 723, 770
HinP1I GCGC 2 cut(s) 723, 770
HincII GTYRAC 1 cut(s) 1080
HindII GTYRAC 1 cut(s) 1080
HindIII AAGCTT 1 cut(s) 294
HinfI GANTC 3 cut(s) 376, 795, 968
HpaII CCGG 3 cut(s) 264, 380, 792
HphI GGTGA 1 cut(s) 178
Hpy166II GTNNAC 4 cut(s) 251, 819, 1080, 1205
Hpy188I TCNGA 7 cut(s) 175, 426, 511, 973, 1148, 1188, 1213
Hpy188III TCNNGA 9 cut(s) 102, 188, 319, 414, 434, 461, 500, 965, 1072
Hpy8I GTNNAC 4 cut(s) 251, 819, 1080, 1205
HpyAV CCTTC 7 cut(s) 170, 429, 431, 674, 832, 1016, 1169
HpyCH4III ACNGT 4 cut(s) 19, 544, 637, 748
HpyF10VI GCNNNNNNNGC 4 cut(s) 113, 396, 896, 1109
HpyF3I CTNAG 7 cut(s) 142, 218, 423, 442, 508, 641, 785
Hsp92II CATG 3 cut(s) 208, 1021, 1042
HspAI GCGC 2 cut(s) 723, 770
KpnI GGTACC 1 cut(s) 138
Kzo9I GATC 9 cut(s) 33, 43, 229, 430, 496, 552, 852, 955, 973
LmnI GCTCC 4 cut(s) 11, 104, 113, 468
Lsp1109I GCAGC 5 cut(s) 408, 483, 598, 712, 1099
MaeIII GTNAC 2 cut(s) 27, 259
MalI GATC 9 cut(s) 35, 45, 231, 432, 498, 554, 854, 957, 975
MboI GATC 9 cut(s) 33, 43, 229, 430, 496, 552, 852, 955, 973
MboII GAAGA 3 cut(s) 418, 444, 447
MfeI CAATTG 1 cut(s) 729
MflI RGATCY 3 cut(s) 43, 552, 852
MhlI GDGCHC 3 cut(s) 109, 118, 253
MluCI AATT 8 cut(s) 58, 208, 503, 729, 735, 1067, 1172, 1216
MlyI GAGTC 1 cut(s) 789
MmeI TCCRAC 1 cut(s) 967
MnlI CCTC 6 cut(s) 459, 505, 836, 983, 1145, 1166
Mph1103I ATGCAT 1 cut(s) 70
MroXI GAANNNNTTC 1 cut(s) 1193
MseI TTAA 6 cut(s) 89, 305, 483, 537, 779, 1175
MslI CAYNNNNRTG 2 cut(s) 20, 362
MspI CCGG 3 cut(s) 264, 380, 792
MspR9I CCNGG 1 cut(s) 606
MunI CAATTG 1 cut(s) 729
Mva1269I GAATGC 1 cut(s) 181
MvaI CCWGG 1 cut(s) 606
MvnI CGCG 1 cut(s) 1143
MwoI GCNNNNNNNGC 4 cut(s) 113, 396, 896, 1109
NdeII GATC 9 cut(s) 33, 43, 229, 430, 496, 552, 852, 955, 973
NlaIII CATG 3 cut(s) 208, 1021, 1042
NlaIV GGNNCC 4 cut(s) 13, 136, 554, 854
NmeAIII GCCGAG 1 cut(s) 886
NsiI ATGCAT 1 cut(s) 70
PctI GAATGC 1 cut(s) 181
PdmI GAANNNNTTC 1 cut(s) 1193
PfeI GAWTC 2 cut(s) 376, 968
PkrI GCNGC 5 cut(s) 398, 473, 588, 727, 1114
PleI GAGTC 1 cut(s) 789
PpsI GAGTC 1 cut(s) 789
PshAI GACNNNNGTC 1 cut(s) 799
Psp124BI GAGCTC 2 cut(s) 109, 118
Psp6I CCWGG 1 cut(s) 604
PspEI GGTNACC 1 cut(s) 259
PspGI CCWGG 1 cut(s) 604
PspN4I GGNNCC 4 cut(s) 13, 136, 554, 854
PspPI GGNCC 2 cut(s) 214, 819
PsuI RGATCY 3 cut(s) 43, 552, 852
RsaI GTAC 4 cut(s) 136, 195, 600, 639
RsaNI GTAC 4 cut(s) 135, 194, 599, 638
RseI CAYNNNNRTG 2 cut(s) 20, 362
SacI GAGCTC 2 cut(s) 109, 118
SaqAI TTAA 6 cut(s) 89, 305, 483, 537, 779, 1175
SatI GCNGC 5 cut(s) 397, 472, 587, 726, 1113
Sau3AI GATC 9 cut(s) 33, 43, 229, 430, 496, 552, 852, 955, 973
Sau96I GGNCC 2 cut(s) 214, 819
ScaI AGTACT 1 cut(s) 195
SchI GAGTC 1 cut(s) 789
ScrFI CCNGG 1 cut(s) 606
SduI GDGCHC 3 cut(s) 109, 118, 253
SinI GGWCC 2 cut(s) 214, 819
SmiMI CAYNNNNRTG 2 cut(s) 20, 362
SmlI CTYRAG 1 cut(s) 459
SmoI CTYRAG 1 cut(s) 459
Sse9I AATT 8 cut(s) 58, 208, 503, 729, 735, 1067, 1172, 1216
SsiI CCGC 2 cut(s) 1141, 1179
SstI GAGCTC 2 cut(s) 109, 118
StyD4I CCNGG 1 cut(s) 604
StyI CCWWGG 1 cut(s) 669
TaaI ACNGT 4 cut(s) 19, 544, 637, 748
TaqII GACCGA 1 cut(s) 202
TasI AATT 8 cut(s) 58, 208, 503, 729, 735, 1067, 1172, 1216
TatI WGTACW 3 cut(s) 193, 598, 637
TfiI GAWTC 2 cut(s) 376, 968
Tru1I TTAA 6 cut(s) 89, 305, 483, 537, 779, 1175
Tru9I TTAA 6 cut(s) 89, 305, 483, 537, 779, 1175
TscAI CASTG 3 cut(s) 22, 640, 821
TseI GCWGC 5 cut(s) 396, 471, 586, 725, 1112
TspDTI ATGAA 5 cut(s) 221, 259, 346, 504, 1209
TspRI CASTG 3 cut(s) 22, 640, 821
VneI GTGCAC 1 cut(s) 249
VpaK11BI GGWCC 2 cut(s) 214, 819
XapI RAATTY 6 cut(s) 58, 208, 503, 735, 1067, 1216
XcmI CCANNNNNNNNNTGG 1 cut(s) 1068
XmnI GAANNNNTTC 1 cut(s) 1193
ZrmI AGTACT 1 cut(s) 195
Zsp2I ATGCAT 1 cut(s) 70
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.