Rw3G009230

Solute carrier family 40 member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Forward (+)
8815371 .. 8819053
3683 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G009230.1

Sequence Viewer

Length: 1548 bp
ATGAAGCAGGAGGAAGAGCGCCTTCTAGCCCATGTACAAGAATACCCTTCTGATCATTCTCAATATGATCCTCTTCCTTCAATTCTTGTCAAATATCTTTACATAGGCCACTTTTTGGCCAGATGGGGTGCCAGAATGTGGGAATTCTCTGTTGGTTTATACATGATAAATGTATGGCCAGAGTCTCTACTCTTTGCTGCTACATATGGTGTGGTGGAATCAGCCTCTACTGCGCTTTTTGGACCTTTGGTCGGACGGTGGGTGGATAGATTCTCATATGTAAAGATTCTTCGAGTTTGGTTAGTAACACAAAATCTCTCTTTTATGATTGCCGGAGCCACCGTGATGGCGTTACTGATCTACCCAGATCTAAAGCTCACAAATTTCAATGCATTTGTTTTACTTATCATATTAACCAACATCTCTGGAGCTCTTGGAGTTCTCTCCACTCTTGCTGGTACCATCTTAGTTGAAAGAGACTGGGTTGTGGTGATATCAGAAGGGCATTCTCCAGAAGTACTAACAAACATGAATTCGGTCATTAGGCGTATTGATCTTTTCTCCAAGCTATGTGCTCCTGTGGTAACCGGCTTCATCATCAGCTTTGTATCACTAAAAGCTTCTGCTTTAACTTTAGCACTCTGGAATACTATATCTGTTTGGCTGGAATACTGGCTATTCATTTCTGTGTATAATGGGATTCCGGCTTTAGGCGAAAGCAGTCAAAGGAAGCTATCAAGACCTTCTCAGAGTGATCTTGAAGGCTCAGGCTCATCTTCTTCTCAAGAGAGGAGCAGCTTGCTTTTTAAAGATGAAAATGATCCAGAATTCGCAGAGGAAAGCTGGATTACTGGGGTTATTAAAACGGTATCAAGGATCCCATATGTTAGTGCTTGGAGTGTGTATTTGCAGCAAGATGTTGTACTCCCTGGAGTATCTCTGGCTTTGTTATATTTCACTGTACTCAGCTTTGGAACATTGATGACAGCTACCTTGGAATGGGAAGGCATACCTGCATACACCATTGGGATAGCTCGTGGAATAAGCGCTGCAATTGGAATTTCTGCAACAGTTGTTTATCCCATCTTGCAAGCTCATTTCTTAACACTTAGAACCGGACTCTGGTCTATCTGGTGTCAGTGGACCTTCCTCATATTATGTGTTGCTTCAGTATGGATCCATAACAGCCTTTGGTCAGCTTATATGCTAATGGCAGGAGTGGCTACTTCTCGGCTTGGGTTGTGGATGTTTGATTTGGCTGTCATCCAACAAATGCAGGATCAAGTTCCTGAATCAGATCGTTGTGTAGTGGGAGGTGTTCAAAACTCCCTTCAGTCCAGCATGGATTTGATGGGCTATGTCATGGGAATAATCATATCTAATCCACAGGAATTCTGGAAGTTGATTTTGGTCTCGTTTGCCATGGCAACGTTGGCAGCATTGCTCTATACCCTGCACGTTTACCGCGTACGAAAGCACCTCCTTCACTTTGAGAAATTAGCCTTCGTTCTGAAATGCTTCACCAGTTCACAATCTGAAAATTCATAA

Protein Analysis

515

Amino Acids

57.62

Weight (kDa)

5.88

Isoelectric Point (pI)

38.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPN1 PF06963 31 - 474 3e-160 Ferroportin1 (FPN1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1021
Acc65I GGTACC 1 cut(s) 458
AccB1I GGYRCC 2 cut(s) 128, 458
AccB7I CCANNNNNTGG 2 cut(s) 115, 138
AccII CGCG 1 cut(s) 1467
AciI CCGC 1 cut(s) 1465
AclI AACGTT 1 cut(s) 1430
AclWI GGATC 7 cut(s) 62, 815, 871, 884, 1171, 1184, 1287
AcoI YGGCCR 2 cut(s) 117, 176
AcsI RAATTY 7 cut(s) 143, 382, 532, 827, 1059, 1391, 1540
AcuI CTGAAG 2 cut(s) 1152, 1316
AfaI GTAC 6 cut(s) 36, 460, 519, 924, 963, 1470
AfeI AGCGCT 1 cut(s) 1048
AfiI CCNNNNNNNGG 6 cut(s) 115, 138, 251, 710, 999, 1122
AgsI TTSAA 5 cut(s) 81, 388, 473, 761, 1322
AhdI GACNNNNNGTC 1 cut(s) 248
AjnI CCWGG 1 cut(s) 928
AjuI GAANNNNNNNTTGG 4 cut(s) 135, 167, 1391, 1423
Alw21I GWGCWC 2 cut(s) 433, 577
Alw26I GTCTC 3 cut(s) 189, 471, 1417
AlwI GGATC 7 cut(s) 62, 815, 871, 884, 1171, 1184, 1287
Aor51HI AGCGCT 1 cut(s) 1048
AoxI GGCC 3 cut(s) 106, 117, 176
ApeKI GCWGC 5 cut(s) 197, 795, 910, 1049, 1436
ApoI RAATTY 7 cut(s) 143, 382, 532, 827, 1059, 1391, 1540
Asp700I GAANNNNTTC 1 cut(s) 1517
Asp718I GGTACC 1 cut(s) 458
AspLEI GCGC 3 cut(s) 21, 235, 1049
AspS9I GGNCC 2 cut(s) 242, 1143
AsuHPI GGTGA 2 cut(s) 502, 1513
AvaII GGWCC 2 cut(s) 242, 1143
BalI TGGCCA 2 cut(s) 119, 178
BamHI GGATCC 2 cut(s) 876, 1176
BanI GGYRCC 2 cut(s) 128, 458
BanII GRGCYC 1 cut(s) 433
BarI GAAGNNNNNNTAC 2 cut(s) 273, 305
BauI CACGAG 1 cut(s) 1035
Bbv12I GWGCWC 2 cut(s) 433, 577
BbvI GCAGC 5 cut(s) 184, 807, 922, 1036, 1448
BccI CCATC 5 cut(s) 117, 340, 470, 1091, 1345
BciT130I CCWGG 1 cut(s) 930
BclI TGATCA 1 cut(s) 52
BcoDI GTCTC 3 cut(s) 189, 471, 1417
BfaI CTAG 1 cut(s) 26
BfoI RGCGCY 2 cut(s) 22, 1050
BfuAI ACCTGC 1 cut(s) 1021
BglII AGATCT 1 cut(s) 367
BisI GCNGC 5 cut(s) 198, 796, 911, 1050, 1437
BlsI GCNGC 5 cut(s) 199, 797, 912, 1051, 1438
BmcAI AGTACT 1 cut(s) 519
Bme1390I CCNGG 1 cut(s) 930
Bme18I GGWCC 2 cut(s) 242, 1143
BmeRI GACNNNNNGTC 1 cut(s) 248
BmgT120I GGNCC 2 cut(s) 242, 1143
BmiI GGNNCC 5 cut(s) 130, 337, 460, 878, 1178
BmrFI CCNGG 1 cut(s) 930
BmrI ACTGGG 2 cut(s) 490, 861
BmuI ACTGGG 2 cut(s) 490, 861
BoxI GACNNNNGTC 1 cut(s) 1123
BpmI CTGGAG 3 cut(s) 447, 495, 951
Bpu10I CCTNAGC 1 cut(s) 766
BpuEI CTTGAG 1 cut(s) 768
BsaI GGTCTC 1 cut(s) 1417
BsaJI CCNNGG 3 cut(s) 928, 993, 1422
BsaWI WCCGGW 1 cut(s) 1115
BsaXI ACNNNNNCTCC 2 cut(s) 327, 357
Bsc4I CCNNNNNNNGG 6 cut(s) 115, 138, 251, 710, 999, 1122
Bse118I RCCGGY 1 cut(s) 587
Bse1I ACTGG 4 cut(s) 485, 677, 856, 1524
Bse3DI GCAATG 1 cut(s) 1439
BseBI CCWGG 1 cut(s) 930
BseDI CCNNGG 3 cut(s) 928, 993, 1422
BseGI GGATG 2 cut(s) 1251, 1263
BseLI CCNNNNNNNGG 6 cut(s) 115, 138, 251, 710, 999, 1122
BseMI GCAATG 1 cut(s) 1439
BseMII CTCAG 3 cut(s) 761, 780, 979
BseNI ACTGG 4 cut(s) 485, 677, 856, 1524
BseRI GAGGAG 1 cut(s) 805
BseXI GCAGC 5 cut(s) 184, 807, 922, 1036, 1448
BsgI GTGCAG 1 cut(s) 1439
Bsh1236I CGCG 1 cut(s) 1467
BshFI GGCC 3 cut(s) 108, 119, 178
BshNI GGYRCC 2 cut(s) 128, 458
BsiHKAI GWGCWC 2 cut(s) 433, 577
BsiSI CCGG 4 cut(s) 333, 588, 704, 1116
BsiWI CGTACG 1 cut(s) 1468
BslI CCNNNNNNNGG 6 cut(s) 115, 138, 251, 710, 999, 1122
BsmAI GTCTC 3 cut(s) 189, 471, 1417
BsmI GAATGC 1 cut(s) 505
BsnI GGCC 3 cut(s) 108, 119, 178
Bso31I GGTCTC 1 cut(s) 1417
Bsp1286I GDGCHC 2 cut(s) 433, 577
Bsp1407I TGTACA 1 cut(s) 34
Bsp19I CCATGG 1 cut(s) 1422
BspACI CCGC 1 cut(s) 1465
BspANI GGCC 3 cut(s) 108, 119, 178
BspCNI CTCAG 3 cut(s) 760, 779, 978
BspFNI CGCG 1 cut(s) 1467
BspLI GGNNCC 5 cut(s) 130, 337, 460, 878, 1178
BspMI ACCTGC 1 cut(s) 1021
BspPI GGATC 7 cut(s) 62, 815, 871, 884, 1171, 1184, 1287
BspQI GCTCTTC 1 cut(s) 9
BspT107I GGYRCC 2 cut(s) 128, 458
BspTNI GGTCTC 1 cut(s) 1417
BsrDI GCAATG 1 cut(s) 1439
BsrFI RCCGGY 1 cut(s) 587
BsrGI TGTACA 1 cut(s) 34
BsrI ACTGG 4 cut(s) 485, 677, 856, 1524
BssAI RCCGGY 1 cut(s) 587
BssECI CCNNGG 3 cut(s) 928, 993, 1422
BssSI CACGAG 1 cut(s) 1035
BssT1I CCWWGG 2 cut(s) 993, 1422
Bst2BI CACGAG 1 cut(s) 1035
Bst2UI CCWGG 1 cut(s) 930
Bst4CI ACNGT 5 cut(s) 258, 343, 868, 961, 1072
Bst6I CTCTTC 2 cut(s) 9, 78
BstAUI TGTACA 1 cut(s) 34
BstC8I GCNNGC 2 cut(s) 800, 1092
BstDEI CTNAG 5 cut(s) 466, 747, 766, 965, 1109
BstDSI CCRYGG 1 cut(s) 1422
BstEII GGTNACC 1 cut(s) 583
BstF5I GGATG 2 cut(s) 1251, 1263
BstFNI CGCG 1 cut(s) 1467
BstH2I RGCGCY 2 cut(s) 22, 1050
BstHHI GCGC 3 cut(s) 21, 235, 1049
BstMAI GTCTC 3 cut(s) 189, 471, 1417
BstMWI GCNNNNNNNGC 3 cut(s) 230, 1220, 1433
BstNI CCWGG 1 cut(s) 930
BstPAI GACNNNNGTC 1 cut(s) 1123
BstPI GGTNACC 1 cut(s) 583
BstSCI CCNGG 1 cut(s) 928
BstUI CGCG 1 cut(s) 1467
BstV1I GCAGC 5 cut(s) 184, 807, 922, 1036, 1448
BstX2I RGATCY 3 cut(s) 367, 876, 1176
BstXI CCANNNNNNTGG 1 cut(s) 346
BstYI RGATCY 3 cut(s) 367, 876, 1176
BsuRI GGCC 3 cut(s) 108, 119, 178
BtgI CCRYGG 1 cut(s) 1422
BtsCI GGATG 2 cut(s) 1251, 1263
BtsIMutI CAGTG 2 cut(s) 957, 1145
BveI ACCTGC 1 cut(s) 1021
Cac8I GCNNGC 2 cut(s) 800, 1092
CfoI GCGC 3 cut(s) 21, 235, 1049
Cfr10I RCCGGY 1 cut(s) 587
Cfr13I GGNCC 2 cut(s) 242, 1143
Csp6I GTAC 6 cut(s) 35, 459, 518, 923, 962, 1469
CviAII CATG 6 cut(s) 32, 163, 529, 1342, 1363, 1423
CviQI GTAC 6 cut(s) 35, 459, 518, 923, 962, 1469
DdeI CTNAG 5 cut(s) 466, 747, 766, 965, 1109
DraI TTTAAA 1 cut(s) 808
DriI GACNNNNNGTC 1 cut(s) 248
EaeI YGGCCR 2 cut(s) 117, 176
Eam1104I CTCTTC 2 cut(s) 9, 78
Eam1105I GACNNNNNGTC 1 cut(s) 248
EarI CTCTTC 2 cut(s) 9, 78
Ecl136II GAGCTC 1 cut(s) 431
Eco130I CCWWGG 2 cut(s) 993, 1422
Eco24I GRGCYC 1 cut(s) 433
Eco31I GGTCTC 1 cut(s) 1417
Eco32I GATATC 1 cut(s) 495
Eco47I GGWCC 2 cut(s) 242, 1143
Eco47III AGCGCT 1 cut(s) 1048
Eco53kI GAGCTC 1 cut(s) 431
Eco57I CTGAAG 2 cut(s) 1152, 1316
Eco91I GGTNACC 1 cut(s) 583
EcoICRI GAGCTC 1 cut(s) 431
EcoO65I GGTNACC 1 cut(s) 583
EcoRI GAATTC 4 cut(s) 143, 532, 827, 1391
EcoRII CCWGG 1 cut(s) 928
EcoRV GATATC 1 cut(s) 495
EcoT14I CCWWGG 2 cut(s) 993, 1422
EcoT22I ATGCAT 1 cut(s) 394
EcoT38I GRGCYC 1 cut(s) 433
ErhI CCWWGG 2 cut(s) 993, 1422
FaeI CATG 6 cut(s) 35, 166, 532, 1345, 1366, 1426
FalI AAGNNNNNCTT 1 cut(s) 38
FatI CATG 6 cut(s) 31, 162, 528, 1341, 1362, 1422
FauNDI CATATG 3 cut(s) 205, 277, 883
FbaI TGATCA 1 cut(s) 52
Fnu4HI GCNGC 5 cut(s) 198, 796, 911, 1050, 1437
FokI GGATG 2 cut(s) 1250, 1258
FriOI GRGCYC 1 cut(s) 433
Fsp4HI GCNGC 5 cut(s) 198, 796, 911, 1050, 1437
FspBI CTAG 1 cut(s) 26
GlaI GCGC 3 cut(s) 20, 234, 1048
GluI GCNGC 5 cut(s) 198, 796, 911, 1050, 1437
GsuI CTGGAG 3 cut(s) 447, 495, 951
HaeII RGCGCY 2 cut(s) 22, 1050
HaeIII GGCC 3 cut(s) 108, 119, 178
HapII CCGG 4 cut(s) 333, 588, 704, 1116
HhaI GCGC 3 cut(s) 21, 235, 1049
Hin1II CATG 6 cut(s) 35, 166, 532, 1345, 1366, 1426
Hin6I GCGC 3 cut(s) 19, 233, 1047
HinP1I GCGC 3 cut(s) 19, 233, 1047
HindIII AAGCTT 1 cut(s) 618
HinfI GANTC 7 cut(s) 182, 218, 270, 286, 700, 1119, 1292
HpaII CCGG 4 cut(s) 333, 588, 704, 1116
HphI GGTGA 2 cut(s) 502, 1513
Hpy166II GTNNAC 3 cut(s) 1143, 1462, 1529
Hpy188I TCNGA 7 cut(s) 52, 254, 499, 750, 1297, 1512, 1537
Hpy188III TCNNGA 9 cut(s) 426, 512, 643, 738, 758, 785, 824, 1289, 1396
Hpy8I GTNNAC 3 cut(s) 1143, 1462, 1529
HpyCH4III ACNGT 5 cut(s) 258, 343, 868, 961, 1072
HpyCH4IV ACGT 2 cut(s) 1430, 1458
HpyCH4V TGCA 8 cut(s) 392, 910, 1016, 1052, 1067, 1090, 1276, 1456
HpyF10VI GCNNNNNNNGC 3 cut(s) 230, 1220, 1433
HpyF3I CTNAG 5 cut(s) 466, 747, 766, 965, 1109
HpySE526I ACGT 2 cut(s) 1430, 1458
Hsp92II CATG 6 cut(s) 35, 166, 532, 1345, 1366, 1426
HspAI GCGC 3 cut(s) 19, 233, 1047
KpnI GGTACC 1 cut(s) 462
Ksp22I TGATCA 1 cut(s) 52
LguI GCTCTTC 1 cut(s) 9
LmnI GCTCC 4 cut(s) 335, 428, 580, 792
Lsp1109I GCAGC 5 cut(s) 184, 807, 922, 1036, 1448
MaeI CTAG 1 cut(s) 26
MaeII ACGT 2 cut(s) 1430, 1458
MaeIII GTNAC 3 cut(s) 304, 351, 583
MboII GAAGA 5 cut(s) 26, 65, 281, 768, 771
MfeI CAATTG 1 cut(s) 1053
MflI RGATCY 3 cut(s) 367, 876, 1176
MhlI GDGCHC 2 cut(s) 433, 577
MlsI TGGCCA 2 cut(s) 119, 178
MluNI TGGCCA 2 cut(s) 119, 178
MlyI GAGTC 2 cut(s) 191, 1113
MmeI TCCRAC 2 cut(s) 232, 1291
MnlI CCTC 8 cut(s) 4, 81, 235, 783, 829, 1160, 1307, 1490
Mox20I TGGCCA 2 cut(s) 119, 178
Mph1103I ATGCAT 1 cut(s) 394
MroXI GAANNNNTTC 1 cut(s) 1517
MscI TGGCCA 2 cut(s) 119, 178
MseI TTAA 5 cut(s) 413, 629, 807, 861, 1103
MslI CAYNNNNRTG 2 cut(s) 344, 686
Msp20I TGGCCA 2 cut(s) 119, 178
MspI CCGG 4 cut(s) 333, 588, 704, 1116
MspR9I CCNGG 1 cut(s) 930
MunI CAATTG 1 cut(s) 1053
Mva1269I GAATGC 1 cut(s) 505
MvaI CCWGG 1 cut(s) 930
MvnI CGCG 1 cut(s) 1467
MwoI GCNNNNNNNGC 3 cut(s) 230, 1220, 1433
NcoI CCATGG 1 cut(s) 1422
NdeI CATATG 3 cut(s) 205, 277, 883
NlaIII CATG 6 cut(s) 35, 166, 532, 1345, 1366, 1426
NlaIV GGNNCC 5 cut(s) 130, 337, 460, 878, 1178
NmeAIII GCCGAG 1 cut(s) 1210
NsiI ATGCAT 1 cut(s) 394
PciSI GCTCTTC 1 cut(s) 9
PcsI WCGNNNNNNNCGW 1 cut(s) 1464
PctI GAATGC 1 cut(s) 505
PdmI GAANNNNTTC 1 cut(s) 1517
PfeI GAWTC 5 cut(s) 218, 270, 286, 700, 1292
Pfl23II CGTACG 1 cut(s) 1468
PflMI CCANNNNNTGG 2 cut(s) 115, 138
PkrI GCNGC 5 cut(s) 199, 797, 912, 1051, 1438
PleI GAGTC 2 cut(s) 190, 1113
PpsI GAGTC 2 cut(s) 190, 1113
PshAI GACNNNNGTC 1 cut(s) 1123
Psp124BI GAGCTC 1 cut(s) 433
Psp1406I AACGTT 1 cut(s) 1430
Psp6I CCWGG 1 cut(s) 928
PspEI GGTNACC 1 cut(s) 583
PspGI CCWGG 1 cut(s) 928
PspLI CGTACG 1 cut(s) 1468
PspN4I GGNNCC 5 cut(s) 130, 337, 460, 878, 1178
PspPI GGNCC 2 cut(s) 242, 1143
PsuI RGATCY 3 cut(s) 367, 876, 1176
RsaI GTAC 6 cut(s) 36, 460, 519, 924, 963, 1470
RsaNI GTAC 6 cut(s) 35, 459, 518, 923, 962, 1469
RseI CAYNNNNRTG 2 cut(s) 344, 686
SacI GAGCTC 1 cut(s) 433
SapI GCTCTTC 1 cut(s) 9
SaqAI TTAA 5 cut(s) 413, 629, 807, 861, 1103
SatI GCNGC 5 cut(s) 198, 796, 911, 1050, 1437
Sau96I GGNCC 2 cut(s) 242, 1143
ScaI AGTACT 1 cut(s) 519
SchI GAGTC 2 cut(s) 191, 1113
ScrFI CCNGG 1 cut(s) 930
SduI GDGCHC 2 cut(s) 433, 577
SinI GGWCC 2 cut(s) 242, 1143
SmiMI CAYNNNNRTG 2 cut(s) 344, 686
SmlI CTYRAG 1 cut(s) 783
SmoI CTYRAG 1 cut(s) 783
SsiI CCGC 1 cut(s) 1465
SspMI CTAG 1 cut(s) 26
SstI GAGCTC 1 cut(s) 433
StyD4I CCNGG 1 cut(s) 928
StyI CCWWGG 2 cut(s) 993, 1422
TaaI ACNGT 5 cut(s) 258, 343, 868, 961, 1072
TaiI ACGT 2 cut(s) 1433, 1461
TaqI TCGA 1 cut(s) 292
TaqII GACCGA 1 cut(s) 526
TatI WGTACW 4 cut(s) 34, 517, 922, 961
TfiI GAWTC 5 cut(s) 218, 270, 286, 700, 1292
Tru1I TTAA 5 cut(s) 413, 629, 807, 861, 1103
Tru9I TTAA 5 cut(s) 413, 629, 807, 861, 1103
TscAI CASTG 2 cut(s) 964, 1145
TseI GCWGC 5 cut(s) 197, 795, 910, 1049, 1436
TspDTI ATGAA 6 cut(s) 17, 545, 583, 670, 828, 1533
TspRI CASTG 2 cut(s) 964, 1145
Van91I CCANNNNNTGG 2 cut(s) 115, 138
VpaK11BI GGWCC 2 cut(s) 242, 1143
XapI RAATTY 7 cut(s) 143, 382, 532, 827, 1059, 1391, 1540
XcmI CCANNNNNNNNNTGG 2 cut(s) 1392, 1429
XmnI GAANNNNTTC 1 cut(s) 1517
XspI CTAG 1 cut(s) 26
ZrmI AGTACT 1 cut(s) 519
Zsp2I ATGCAT 1 cut(s) 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.